View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21660_high_18 (Length: 416)

Name: NF21660_high_18
Description: NF21660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21660_high_18
NF21660_high_18
[»] chr4 (62 HSPs)
chr4 (210-399)||(46918726-46918916)
chr4 (1-60)||(15636888-15636947)
chr4 (1-62)||(8949589-8949650)
chr4 (1-62)||(9428035-9428096)
chr4 (1-62)||(24281946-24282007)
chr4 (1-62)||(25768095-25768156)
chr4 (1-62)||(28540825-28540886)
chr4 (1-62)||(28756282-28756343)
chr4 (1-62)||(29246974-29247035)
chr4 (1-62)||(31312113-31312174)
chr4 (1-62)||(34756887-34756948)
chr4 (1-62)||(38698904-38698965)
chr4 (1-62)||(47016319-47016380)
chr4 (1-62)||(53238049-53238110)
chr4 (1-62)||(343885-343946)
chr4 (1-62)||(4553340-4553401)
chr4 (1-62)||(6203137-6203198)
chr4 (1-62)||(19320893-19320954)
chr4 (1-62)||(22515629-22515690)
chr4 (1-62)||(29445603-29445664)
chr4 (1-62)||(47500287-47500348)
chr4 (1-62)||(52224511-52224572)
chr4 (1-62)||(52823430-52823491)
chr4 (3-62)||(6488492-6488551)
chr4 (1-62)||(18092684-18092745)
chr4 (1-62)||(23624454-23624515)
chr4 (1-62)||(23708950-23709011)
chr4 (1-62)||(50642680-50642741)
chr4 (1-62)||(52788932-52788993)
chr4 (1-61)||(47876008-47876068)
chr4 (1-62)||(11455039-11455100)
chr4 (1-62)||(39269726-39269787)
chr4 (1-62)||(40943235-40943296)
chr4 (1-62)||(42931231-42931292)
chr4 (2-62)||(16618926-16618986)
chr4 (14-62)||(35627168-35627216)
chr4 (2-62)||(39656205-39656265)
chr4 (1-60)||(34680406-34680465)
chr4 (1-62)||(34509723-34509784)
chr4 (1-62)||(42643073-42643133)
chr4 (1-62)||(53231289-53231350)
chr4 (18-62)||(29441950-29441994)
chr4 (1-62)||(1776711-1776771)
chr4 (1-62)||(35015394-35015456)
chr4 (154-199)||(42643285-42643331)
chr4 (1-62)||(11997128-11997189)
chr4 (2-62)||(39788859-39788919)
chr4 (1-62)||(11152277-11152336)
chr4 (154-199)||(15636688-15636734)
chr4 (154-199)||(38698289-38698335)
chr4 (156-189)||(11996504-11996537)
chr4 (1-34)||(11996795-11996828)
chr4 (154-202)||(19320259-19320308)
chr4 (1-38)||(23064049-23064086)
chr4 (154-198)||(28540628-28540673)
chr4 (1-62)||(28706082-28706143)
chr4 (154-189)||(16619138-16619174)
chr4 (154-189)||(23064673-23064709)
chr4 (1-33)||(28706444-28706476)
chr4 (154-193)||(35627799-35627839)
chr4 (1-61)||(38698585-38698645)
chr4 (154-189)||(53231502-53231538)
[»] chr8 (48 HSPs)
chr8 (1-62)||(30378158-30378219)
chr8 (1-62)||(2060941-2061002)
chr8 (1-62)||(7637123-7637184)
chr8 (1-62)||(12616447-12616508)
chr8 (1-62)||(13699473-13699534)
chr8 (1-62)||(39106936-39106997)
chr8 (1-62)||(4517011-4517072)
chr8 (1-62)||(13082833-13082894)
chr8 (1-62)||(19183020-19183081)
chr8 (1-62)||(34058726-34058787)
chr8 (1-62)||(35209628-35209689)
chr8 (1-62)||(41724848-41724909)
chr8 (1-62)||(42174094-42174155)
chr8 (1-62)||(42175275-42175336)
chr8 (1-61)||(4136951-4137011)
chr8 (2-62)||(24541923-24541983)
chr8 (2-62)||(32098773-32098833)
chr8 (2-62)||(44090562-44090622)
chr8 (2-61)||(41315521-41315580)
chr8 (1-59)||(36765565-36765623)
chr8 (1-62)||(11385534-11385595)
chr8 (1-62)||(22849450-22849511)
chr8 (1-62)||(28174318-28174379)
chr8 (1-62)||(41219634-41219695)
chr8 (2-62)||(7419796-7419856)
chr8 (2-62)||(34050658-34050718)
chr8 (1-61)||(43470523-43470583)
chr8 (3-62)||(16729184-16729243)
chr8 (1-62)||(8076296-8076356)
chr8 (1-62)||(16356433-16356494)
chr8 (1-62)||(17918879-17918940)
chr8 (1-62)||(24685434-24685495)
chr8 (1-61)||(41161590-41161650)
chr8 (1-62)||(18365221-18365282)
chr8 (1-62)||(27519637-27519698)
chr8 (1-62)||(36051887-36051948)
chr8 (1-41)||(27923705-27923745)
chr8 (17-62)||(40042088-40042133)
chr8 (1-38)||(42219392-42219429)
chr8 (1-62)||(45421422-45421483)
chr8 (23-62)||(3295725-3295764)
chr8 (154-189)||(32099379-32099414)
chr8 (154-195)||(43661948-43661990)
chr8 (154-194)||(17919091-17919132)
chr8 (1-34)||(45421784-45421817)
chr8 (1-33)||(18365584-18365616)
chr8 (154-193)||(36610672-36610712)
chr8 (154-189)||(36766102-36766138)
[»] chr6 (18 HSPs)
chr6 (1-62)||(19693223-19693284)
chr6 (1-62)||(12783511-12783572)
chr6 (1-61)||(33971486-33971546)
chr6 (1-62)||(16270253-16270314)
chr6 (3-62)||(5359252-5359311)
chr6 (1-62)||(13400242-13400303)
chr6 (1-62)||(30753859-30753920)
chr6 (1-61)||(2857412-2857472)
chr6 (2-62)||(15053872-15053932)
chr6 (1-62)||(945927-945988)
chr6 (1-62)||(22007229-22007290)
chr6 (2-62)||(22423034-22423094)
chr6 (1-62)||(20510091-20510152)
chr6 (154-203)||(17122673-17122723)
chr6 (154-194)||(13400049-13400090)
chr6 (154-198)||(19692600-19692645)
chr6 (154-189)||(7855660-7855696)
chr6 (154-189)||(15516756-15516792)
[»] chr5 (42 HSPs)
chr5 (1-62)||(27432535-27432596)
chr5 (1-62)||(4034635-4034696)
chr5 (1-62)||(6450105-6450166)
chr5 (1-62)||(7234590-7234651)
chr5 (1-62)||(14711547-14711608)
chr5 (1-62)||(42992455-42992516)
chr5 (1-62)||(18740760-18740821)
chr5 (1-62)||(19928598-19928659)
chr5 (1-62)||(20452997-20453058)
chr5 (1-62)||(24333979-24334040)
chr5 (1-62)||(27189034-27189095)
chr5 (1-62)||(41906826-41906887)
chr5 (2-62)||(7573060-7573120)
chr5 (3-62)||(22981952-22982011)
chr5 (1-62)||(4291762-4291823)
chr5 (1-62)||(8315640-8315701)
chr5 (1-62)||(19000663-19000724)
chr5 (1-62)||(34818881-34818942)
chr5 (1-62)||(38983369-38983430)
chr5 (3-62)||(33010374-33010433)
chr5 (14-62)||(2567504-2567552)
chr5 (11-62)||(5597823-5597874)
chr5 (1-62)||(4123162-4123223)
chr5 (1-54)||(24090135-24090188)
chr5 (2-61)||(38265498-38265557)
chr5 (1-62)||(795847-795908)
chr5 (1-62)||(22670946-22671007)
chr5 (1-41)||(36816379-36816419)
chr5 (154-199)||(796493-796539)
chr5 (154-188)||(27189681-27189715)
chr5 (1-35)||(32299838-32299872)
chr5 (154-188)||(43370575-43370609)
chr5 (154-203)||(43370699-43370749)
chr5 (1-62)||(8979973-8980034)
chr5 (1-34)||(22671307-22671340)
chr5 (1-34)||(25001193-25001226)
chr5 (1-34)||(32299503-32299536)
chr5 (1-34)||(36816721-36816754)
chr5 (154-193)||(4035277-4035317)
chr5 (154-189)||(6390608-6390644)
chr5 (2-58)||(18404338-18404394)
chr5 (154-201)||(20452797-20452845)
[»] chr3 (64 HSPs)
chr3 (1-62)||(31269664-31269725)
chr3 (1-62)||(869523-869584)
chr3 (1-62)||(3078451-3078512)
chr3 (1-62)||(23878678-23878739)
chr3 (1-62)||(24342745-24342806)
chr3 (1-62)||(28055220-28055281)
chr3 (1-62)||(28065645-28065706)
chr3 (1-62)||(33391105-33391166)
chr3 (1-62)||(36777946-36778007)
chr3 (1-62)||(43729842-43729903)
chr3 (1-62)||(45454414-45454475)
chr3 (1-62)||(50362470-50362531)
chr3 (1-62)||(53328592-53328653)
chr3 (1-61)||(4994176-4994236)
chr3 (1-62)||(15490723-15490784)
chr3 (1-62)||(16128610-16128671)
chr3 (1-62)||(16644701-16644762)
chr3 (1-62)||(19006794-19006855)
chr3 (1-62)||(29166945-29167006)
chr3 (1-62)||(30786538-30786599)
chr3 (1-62)||(37126952-37127013)
chr3 (1-62)||(43127649-43127710)
chr3 (1-62)||(47199064-47199125)
chr3 (1-62)||(53947636-53947697)
chr3 (2-62)||(50762577-50762637)
chr3 (3-62)||(43660491-43660550)
chr3 (1-62)||(10182194-10182255)
chr3 (1-62)||(30778720-30778781)
chr3 (1-62)||(34779277-34779338)
chr3 (1-62)||(40126852-40126913)
chr3 (1-58)||(49612356-49612413)
chr3 (2-62)||(34225993-34226053)
chr3 (1-61)||(48585838-48585898)
chr3 (2-62)||(55006119-55006179)
chr3 (1-62)||(1486915-1486976)
chr3 (1-62)||(50133491-50133552)
chr3 (1-62)||(51368532-51368593)
chr3 (1-62)||(53629068-53629129)
chr3 (2-62)||(30664170-30664230)
chr3 (6-61)||(53658087-53658141)
chr3 (1-62)||(7587932-7587993)
chr3 (2-62)||(23251639-23251699)
chr3 (1-62)||(8339743-8339803)
chr3 (1-50)||(45009389-45009438)
chr3 (14-62)||(4735864-4735912)
chr3 (1-61)||(25578471-25578531)
chr3 (1-62)||(16787566-16787627)
chr3 (1-58)||(45343996-45344053)
chr3 (155-188)||(50361848-50361881)
chr3 (2-38)||(36253318-36253354)
chr3 (154-189)||(15288503-15288538)
chr3 (4-43)||(33224634-33224673)
chr3 (2-41)||(42367826-42367865)
chr3 (154-199)||(47199277-47199323)
chr3 (1-35)||(51324689-51324723)
chr3 (1-34)||(12015452-12015485)
chr3 (1-34)||(19878133-19878166)
chr3 (1-62)||(19878467-19878527)
chr3 (1-34)||(25578137-25578170)
chr3 (154-194)||(34266073-34266114)
chr3 (154-193)||(8874322-8874362)
chr3 (157-201)||(24342114-24342158)
chr3 (154-193)||(30787154-30787194)
chr3 (1-62)||(32245695-32245758)
[»] chr2 (43 HSPs)
chr2 (1-62)||(12620304-12620365)
chr2 (1-60)||(36218599-36218658)
chr2 (1-62)||(13803256-13803317)
chr2 (1-62)||(16709109-16709170)
chr2 (2-62)||(10972442-10972502)
chr2 (2-62)||(25553568-25553628)
chr2 (1-62)||(9737566-9737627)
chr2 (1-62)||(37741996-37742057)
chr2 (1-62)||(41178676-41178737)
chr2 (1-62)||(45301339-45301400)
chr2 (1-62)||(17614908-17614969)
chr2 (1-62)||(18549480-18549541)
chr2 (1-62)||(31653328-31653389)
chr2 (1-62)||(40855091-40855152)
chr2 (2-62)||(20973214-20973274)
chr2 (2-56)||(10214887-10214941)
chr2 (1-62)||(37850288-37850350)
chr2 (1-62)||(2431287-2431348)
chr2 (1-62)||(20505971-20506032)
chr2 (1-62)||(35516380-35516441)
chr2 (1-62)||(43271157-43271218)
chr2 (1-62)||(7662344-7662405)
chr2 (1-62)||(44300649-44300710)
chr2 (14-62)||(6708509-6708557)
chr2 (1-40)||(14542228-14542267)
chr2 (1-56)||(39375143-39375198)
chr2 (1-62)||(3201764-3201825)
chr2 (1-62)||(7748613-7748674)
chr2 (1-62)||(42520988-42521049)
chr2 (2-62)||(7401624-7401684)
chr2 (154-199)||(39375354-39375400)
chr2 (1-62)||(39670366-39670427)
chr2 (1-41)||(33666635-33666675)
chr2 (17-62)||(5363691-5363737)
chr2 (154-195)||(22166560-22166602)
chr2 (1-34)||(6206167-6206200)
chr2 (1-30)||(6244454-6244483)
chr2 (1-34)||(7749016-7749049)
chr2 (1-38)||(8094823-8094860)
chr2 (2-35)||(38063064-38063097)
chr2 (154-189)||(33666014-33666050)
chr2 (154-201)||(40855726-40855774)
chr2 (154-189)||(45416303-45416339)
[»] chr1 (58 HSPs)
chr1 (1-62)||(2207665-2207726)
chr1 (2-62)||(17964079-17964139)
chr1 (1-62)||(4008880-4008941)
chr1 (1-62)||(14007010-14007071)
chr1 (1-62)||(35767096-35767157)
chr1 (1-62)||(47632724-47632785)
chr1 (2-62)||(26507574-26507634)
chr1 (2-62)||(31267035-31267095)
chr1 (2-61)||(10371655-10371714)
chr1 (1-60)||(26911240-26911299)
chr1 (1-62)||(4574145-4574206)
chr1 (1-62)||(10372831-10372892)
chr1 (1-62)||(10383160-10383221)
chr1 (1-62)||(15358412-15358473)
chr1 (1-62)||(25137019-25137080)
chr1 (1-62)||(26451148-26451209)
chr1 (1-62)||(31861694-31861755)
chr1 (1-62)||(36796000-36796061)
chr1 (1-62)||(48624335-48624396)
chr1 (1-62)||(48723492-48723553)
chr1 (2-62)||(4647149-4647209)
chr1 (1-61)||(14421238-14421298)
chr1 (1-62)||(4486901-4486962)
chr1 (1-62)||(14744011-14744072)
chr1 (1-62)||(32037335-32037396)
chr1 (1-62)||(34076129-34076190)
chr1 (1-62)||(46667584-46667645)
chr1 (1-62)||(48468303-48468364)
chr1 (1-62)||(52760467-52760528)
chr1 (1-61)||(45583632-45583692)
chr1 (2-62)||(4057767-4057828)
chr1 (1-62)||(10658688-10658749)
chr1 (1-62)||(14410901-14410962)
chr1 (1-62)||(28253942-28254003)
chr1 (1-62)||(45194436-45194497)
chr1 (2-62)||(10895708-10895768)
chr1 (2-62)||(43030270-43030330)
chr1 (1-62)||(52526808-52526870)
chr1 (1-62)||(7587018-7587079)
chr1 (2-62)||(7603685-7603745)
chr1 (1-62)||(26136142-26136201)
chr1 (16-62)||(36449585-36449631)
chr1 (1-62)||(40723568-40723629)
chr1 (1-38)||(45336436-45336473)
chr1 (1-62)||(52710840-52710901)
chr1 (1-41)||(9130278-9130318)
chr1 (154-203)||(6057044-6057094)
chr1 (154-199)||(14006812-14006858)
chr1 (1-62)||(46184399-46184458)
chr1 (1-62)||(45716912-45716973)
chr1 (1-38)||(48609599-48609636)
chr1 (154-195)||(27850742-27850784)
chr1 (154-202)||(14421035-14421084)
chr1 (154-194)||(31267246-31267287)
chr1 (154-193)||(16428321-16428361)
chr1 (2-38)||(23176084-23176120)
chr1 (154-189)||(35767309-35767345)
chr1 (157-185)||(47209989-47210017)
[»] scaffold0029 (3 HSPs)
scaffold0029 (1-62)||(42009-42070)
scaffold0029 (1-62)||(16962-17023)
scaffold0029 (1-62)||(48127-48188)
[»] chr7 (38 HSPs)
chr7 (1-62)||(11620014-11620075)
chr7 (1-62)||(17314668-17314729)
chr7 (1-62)||(21202352-21202413)
chr7 (1-62)||(23023594-23023655)
chr7 (1-62)||(34651658-34651719)
chr7 (1-61)||(7208071-7208131)
chr7 (1-61)||(14962626-14962686)
chr7 (1-61)||(15392098-15392158)
chr7 (1-62)||(9900609-9900670)
chr7 (1-62)||(39035915-39035976)
chr7 (1-62)||(45983595-45983656)
chr7 (1-62)||(45986261-45986322)
chr7 (1-61)||(23064414-23064474)
chr7 (2-62)||(28642452-28642512)
chr7 (1-60)||(5029282-5029341)
chr7 (1-62)||(2510639-2510700)
chr7 (1-62)||(17920714-17920775)
chr7 (1-62)||(30740740-30740801)
chr7 (1-62)||(36040013-36040074)
chr7 (1-62)||(24424350-24424411)
chr7 (1-62)||(33574844-33574905)
chr7 (2-62)||(42335595-42335656)
chr7 (1-55)||(47229635-47229689)
chr7 (1-61)||(46158134-46158194)
chr7 (1-62)||(47784882-47784944)
chr7 (1-62)||(41098370-41098431)
chr7 (1-41)||(498727-498767)
chr7 (1-45)||(7626543-7626587)
chr7 (2-62)||(33772457-33772517)
chr7 (154-189)||(47784271-47784306)
chr7 (1-34)||(499068-499101)
chr7 (1-34)||(27428763-27428796)
chr7 (1-34)||(33772123-33772156)
chr7 (1-62)||(41327510-41327571)
chr7 (154-198)||(47228946-47228991)
chr7 (1-62)||(47463639-47463700)
chr7 (2-38)||(6972377-6972413)
chr7 (1-41)||(27428422-27428462)
[»] scaffold0991 (1 HSPs)
scaffold0991 (1-62)||(850-911)
[»] scaffold0493 (1 HSPs)
scaffold0493 (1-62)||(6831-6892)
[»] scaffold0618 (1 HSPs)
scaffold0618 (2-62)||(9286-9346)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-62)||(235564-235625)


Alignment Details
Target: chr4 (Bit Score: 183; Significance: 7e-99; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 210 - 399
Target Start/End: Original strand, 46918726 - 46918916
Alignment:
Q  210 ttagtgataacttgttaaacccttttgttgtctcgttctagaatctgttgcttacttctttcaccatttcagatt-cgacatggcggctttcttaaggag 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  46918726 ttagtgataacttgttaaacccttttgttgtctcgttctagaatctgttgcttacttctttcaccatttcagatttcgacatggcggctttcttaaggag 46918825  T
Q  309 agttgcaaggtccactccgatcggattcggcgcccattccaaatcctcccgttccaatttccacctacccttcactgctatcgccgccatt 399  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46918826 agttgcaaggtccactccgatcggattcggcgcccattccaaatcctcccgttccaatttccacctacccttcactgctatcgccgccatt 46918916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 15636947 - 15636888
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataa 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15636947 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataa 15636888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 8949650 - 8949589
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8949650 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 8949589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 9428096 - 9428035
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9428096 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 9428035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 24281946 - 24282007
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24281946 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 24282007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25768095 - 25768156
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25768095 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 25768156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28540886 - 28540825
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  28540886 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 28540825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28756343 - 28756282
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  28756343 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 28756282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29246974 - 29247035
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  29246974 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 29247035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 31312174 - 31312113
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31312174 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 31312113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34756948 - 34756887
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34756948 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 34756887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 38698904 - 38698965
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  38698904 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 38698965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 47016319 - 47016380
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  47016319 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 47016380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 53238049 - 53238110
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  53238049 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 53238110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 343946 - 343885
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  343946 gaaaatttggacctaaaaataaaattttgagctaatttattgtagcggaaccttttataatg 343885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4553401 - 4553340
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  4553401 gaaaatttggacctaaaaagaaaattttgagctaatttattgtggcggaaccttttataatg 4553340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6203198 - 6203137
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  6203198 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaacattttataatg 6203137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19320893 - 19320954
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  19320893 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaacgttttataatg 19320954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22515690 - 22515629
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  22515690 gaaaatttggacctaaaaataaaattttgggctaatttattgtggcggaaccttttataatg 22515629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29445664 - 29445603
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  29445664 gaaaatttggacctagaaataaaattttgagctaatttattgtggcggaaccttttataatg 29445603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 47500287 - 47500348
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  47500287 gaaaatttggatctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 47500348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 52224572 - 52224511
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  52224572 gaaaatttggacctaaaaataaaattttgagctaatttattgttgcggaaccttttataatg 52224511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 52823430 - 52823491
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  52823430 gaaaatttggacctaaaaataaaattttgaactaatttattgtggcggaaccttttataatg 52823491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 6488551 - 6488492
Alignment:
Q  3 aaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  6488551 aaatttggacctaaaaataaaattttgagctaatttattgtggcgggaccttttataatg 6488492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18092745 - 18092684
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  18092745 gaaaatttggatctaaaaataacattttgagctaatttattgtggcggaaccttttataatg 18092684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23624515 - 23624454
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  23624515 gaaaatttgaacctaaaaagaaaattttgagctaatttattgtggcggaaccttttataatg 23624454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 23708950 - 23709011
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23708950 gaaaattcgaacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 23709011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 50642680 - 50642741
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||    
T  50642680 gaaaatttggacttaaaaataaaattttgagctaatttattgtggcagaaccttttataatg 50642741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 52788932 - 52788993
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||    
T  52788932 gaaaatttggacctaaaaataaaattttgtgctaatttattgtggcggaactttttataatg 52788993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 47876008 - 47876068
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataat 61  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||    
T  47876008 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcgggactttttataat 47876068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 11455100 - 11455039
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||| || |||||||||  ||||||||||||||||||||    
T  11455100 gaaaatttggacctaaaaataaaatttagacctaatttatggtggcggaaccttttataatg 11455039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39269787 - 39269726
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||| || ||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  39269787 gaaaatttagaactaaaaataaaattttgagctaatttattgtggcggaacgttttataatg 39269726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 40943296 - 40943235
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||| ||||||||||||||||||| ||||||||| ||| ||||||||||||||||    
T  40943296 gaaaatttggatctaaaaataaaattttgagttaatttattgtggtggaaccttttataatg 40943235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42931231 - 42931292
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||||||| ||||||||||    
T  42931231 gaaaatttggacctaaaaataaaattttgagctaatttatcgttgcggaactttttataatg 42931292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 16618926 - 16618986
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||| |||||||  ||| ||||||||||||||||    
T  16618926 aaaatttggacctaaaaataaaattttgagcaaatttatggtggtggaaccttttataatg 16618986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 35627216 - 35627168
Alignment:
Q  14 taaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  35627216 taaaaataaaattttgagctaatttattatggcggaaccttttataatg 35627168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 39656265 - 39656205
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||| ||||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  39656265 aaaatttcgacctaaaaataaaattttgaactaatttactgtggcggaaccttttataatg 39656205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 34680406 - 34680465
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataa 60  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  ||| ||||||||    
T  34680406 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcaaaacattttataa 34680465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34509784 - 34509723
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||| |||||  || ||||| ||||||||||    
T  34509784 gaaaatttggacctaaaaataaaattttgagctaacttattgcggaggaacgttttataatg 34509723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42643073 - 42643133
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| |||||||||||||||||||||||||||| |  |||||||||||||||||    
T  42643073 gaaaatttggac-taaaaataaaattttgagctaatttattgttccggaaccttttataatg 42643133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 53231289 - 53231350
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||  | ||||  ||||||||||||||    
T  53231289 gaaaatttggacctaaaaataaaattttgagctaattttatgtggcaaaaccttttataatg 53231350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 29441994 - 29441950
Alignment:
Q  18 aataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  29441994 aataaaattttgagctaatttattgtggcggaaccttttataatg 29441950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1776711 - 1776771
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||| ||||  || |||||||||||| ||||||||||||||||||||    
T  1776711 gaaaatttggacctaaaaaaaaaaaatt-agctaatttattgtggcggaaccttttataatg 1776771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 35015456 - 35015394
Alignment:
Q  1 gaaaatttggacctaaaaataaaat-tttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||| | ||||||||||||  |||||||||||||||| ||| ||||||||||||||||    
T  35015456 gaaaatttgaatctaaaaataaaaactttgagctaatttattgtggtggaaccttttataatg 35015394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 42643285 - 42643331
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaacccaaaaataaat 199  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  42643285 tgcagatatttatagggaccaaaaatttaattaatccaaaaataaat 42643331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 11997128 - 11997189
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| | |||||||||||||||||||| |||||  || ||||| ||||||||||    
T  11997128 gaaaatttggacttgaaaataaaattttgagctaacttattgcggaggaacgttttataatg 11997189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 39788919 - 39788859
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||| |||||||||||||||||| ||| ||||| |||  |||| ||||||||||    
T  39788919 aaaatttggacttaaaaataaaattttgagttaacttattgtggatgaacgttttataatg 39788859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 11152336 - 11152277
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||| |||  ||||| |||||||||| |||  |||||||||||||||    
T  11152336 gaaaatttggacctaaaaaaaaa--tttgacctaatttattgtggtagaaccttttataatg 11152277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 15636734 - 15636688
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaacccaaaaataaat 199  Q
    |||||||||||||||| |||||||| |||||||||||||||| ||||    
T  15636734 tgcagatatttatagggaccaaaaacttaattaacccaaaaaaaaat 15636688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 38698335 - 38698289
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaacccaaaaataaat 199  Q
    |||||||||||||||| |||||||| |||||||| ||||||||||||    
T  38698335 tgcagatatttatagggaccaaaaacttaattaatccaaaaataaat 38698289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 11996537 - 11996504
Alignment:
Q  156 cagatatttataggaccaaaaatttaattaaccc 189  Q
    |||||||||||||||||||||| |||||||||||    
T  11996537 cagatatttataggaccaaaaacttaattaaccc 11996504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 11996795 - 11996828
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagcta 34  Q
    |||||||||||||||| |||||||||||||||||    
T  11996795 gaaaatttggacctaataataaaattttgagcta 11996828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 19320308 - 19320259
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaacccaaaaataaattat 202  Q
    |||| ||||||||||| |||||||| ||||||||||| ||||||||||||    
T  19320308 tgcaaatatttatagggaccaaaaacttaattaaccctaaaataaattat 19320259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 23064086 - 23064049
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaattt 38  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  23064086 gaaaatttggacataaaaataaaattttgacctaattt 23064049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 28540673 - 28540628
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaacccaaaaataaa 198  Q
    |||||||||||||||| |||||||| ||||||||||| ||||||||    
T  28540673 tgcagatatttatagggaccaaaaacttaattaaccctaaaataaa 28540628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28706143 - 28706082
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| |||||||||||||||||| ||| |||||  || ||| | ||||||||||    
T  28706143 gaaaatttggacttaaaaataaaattttgagttaacttattgcggaggagcgttttataatg 28706082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 189
Target Start/End: Original strand, 16619138 - 16619174
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaaccc 189  Q
    |||||||||||||||| ||||||||||||||||||||    
T  16619138 tgcagatatttatagggaccaaaaatttaattaaccc 16619174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 189
Target Start/End: Original strand, 23064673 - 23064709
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaaccc 189  Q
    |||||||||||||||| ||||||||||||||||||||    
T  23064673 tgcagatatttatagggaccaaaaatttaattaaccc 23064709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 28706476 - 28706444
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagct 33  Q
    |||||||||||||||| ||||||||||||||||    
T  28706476 gaaaatttggacctaataataaaattttgagct 28706444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 193
Target Start/End: Original strand, 35627799 - 35627839
Alignment:
Q  154 tgcagatatttatag-gaccaaaaatttaattaacccaaaa 193  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  35627799 tgcagatatttatagagaccaaaaacttaattaacccaaaa 35627839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38698585 - 38698645
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataat 61  Q
    |||||||||||||||| ||||||||||| || || ||| |||||| ||||| || ||||||    
T  38698585 gaaaatttggacctaataataaaattttaagttacttttttttggaggaactttgtataat 38698645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 189
Target Start/End: Original strand, 53231502 - 53231538
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaaccc 189  Q
    |||||||||||||||| ||||||||||||||||||||    
T  53231502 tgcagatatttatagggaccaaaaatttaattaaccc 53231538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 30378219 - 30378158
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30378219 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 30378158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2061002 - 2060941
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2061002 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 2060941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 7637123 - 7637184
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7637123 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 7637184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12616508 - 12616447
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12616508 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 12616447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13699534 - 13699473
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13699534 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 13699473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 39106936 - 39106997
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39106936 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 39106997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4517072 - 4517011
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4517072 gaaaatttggacttaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 4517011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13082894 - 13082833
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  13082894 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcgcaaccttttataatg 13082833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19183020 - 19183081
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19183020 gaaaatttgggcctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 19183081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34058787 - 34058726
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  34058787 gaaaatttggacctaaaaataaaattttgagctgatttattgtggcggaaccttttataatg 34058726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 35209628 - 35209689
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  35209628 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaactttttataatg 35209689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41724909 - 41724848
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41724909 gaaaatttgaacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 41724848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 42174155 - 42174094
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  42174155 gaaaatttggacctaaaaataaatttttgagctaatttattgtggcggaaccttttataatg 42174094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42175275 - 42175336
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42175275 gaaaatttgaacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 42175336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4137011 - 4136951
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataat 61  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  4137011 gaaaatttggacctaaaaataaaattttgagctaatttattgtgacggaaccttttataat 4136951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 24541923 - 24541983
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  24541923 aaaatttggacctaaaaacaaaattttgagctaatttattgtggcggaaccttttataatg 24541983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 32098833 - 32098773
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  32098833 aaaatttgaacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 32098773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 44090562 - 44090622
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44090562 aaaatttgcacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 44090622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 41315521 - 41315580
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataat 61  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41315521 aaaatatggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataat 41315580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 36765623 - 36765565
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttata 59  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  36765623 gaaaatttgaacctaaaaataaaattttgagctaatttattgtggcggaaccttttata 36765565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 11385595 - 11385534
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  11385595 gaaaatttagacctaaaaataaaattttgagttaatttattgtggcggaaccttttataatg 11385534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22849511 - 22849450
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||    
T  22849511 gaaaatttggacctaaaaacaattttttgagctaatttattttggcggaaccttttataatg 22849450  T

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Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28174318 - 28174379
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  28174318 gaaaatttggacttaaaaattaaattttgagctaatttattatggcggaaccttttataatg 28174379  T

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Target: chr8; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41219695 - 41219634
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  41219695 gaaaatttggacctaaaaataaaattttgaactaatttattgtggcggaatcttttataatg 41219634  T

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Target: chr8; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 7419856 - 7419796
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  7419856 aaaatttgaacctaaaaataaaattttgagctaatttattgtggcggaaccttgtataatg 7419796  T

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Target: chr8; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 34050658 - 34050718
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||    
T  34050658 aaaatttggacctaaaaataaaattttgagctaatttattgtgacggaaccttgtataatg 34050718  T

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Target: chr8; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 43470583 - 43470523
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataat 61  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||    
T  43470583 gaaaatttggacctaaaaataaaattttgagctaatttattgtggaggaaacttttataat 43470523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 16729184 - 16729243
Alignment:
Q  3 aaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||    
T  16729184 aaatttggacctaaaaataaaattttgagctaatttattgtggtggaacctttaataatg 16729243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 8076356 - 8076296
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||    
T  8076356 gaaaatttggacctaaaaataaaattttgagttaatttattgtggcgg-accttttataatg 8076296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16356433 - 16356494
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||| ||||||||||||||||||| ||||||| | ||||||||||||||||||||    
T  16356433 gaaaatttggatctaaaaataaaattttgagttaatttaatgtggcggaaccttttataatg 16356494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17918879 - 17918940
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||| | ||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  17918879 gaaaatttgcaactaaaaataaaattttgagctaatttattgtggcgggaccttttataatg 17918940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 24685495 - 24685434
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||| ||||||    
T  24685495 gaaaatttggatctaaaaataaatttttgagctaatttattgtggcggaacctttaataatg 24685434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 41161650 - 41161590
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataat 61  Q
    ||||||||  |||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  41161650 gaaaatttaaacctaaaaataaaattttgagctaatttattttggcagaacattttataat 41161590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18365282 - 18365221
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||| |||||  || ||||| ||||||||||    
T  18365282 gaaaatttggacctaaaaataaaattttgagctaacttattgcggtggaacattttataatg 18365221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 27519698 - 27519637
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||| || ||||||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  27519698 gaaaatttcgatctaaaaataaaattttgagttaattgattgtggcggaaccttttataatg 27519637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 36051948 - 36051887
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||| ||| |||| ||||    
T  36051948 gaaaatttggacttaaaaataaaattttgagctaatttattgtggcgggaccatttagaatg 36051887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27923745 - 27923705
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttatt 41  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  27923745 gaaaatttggacctaaaaataaaattttgagctaacttatt 27923705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 40042088 - 40042133
Alignment:
Q  17 aaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| | |||||||||| ||||||||||||||||||||    
T  40042088 aaataaaattttaaactaatttattgtggcggaaccttttataatg 40042133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 42219392 - 42219429
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaattt 38  Q
    |||||||||||| |||||||||||||||||||||||||    
T  42219392 gaaaatttggacataaaaataaaattttgagctaattt 42219429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 45421483 - 45421422
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| ||||||||||||||||| |||| |||||  || ||||| ||||||||||    
T  45421483 gaaaatttggacttaaaaataaaattttgatctaacttattgcggaggaacgttttataatg 45421422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 3295764 - 3295725
Alignment:
Q  23 aattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  3295764 aattttgagataatttattgtggcggaaccttttataatg 3295725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 154 - 189
Target Start/End: Original strand, 32099379 - 32099414
Alignment:
Q  154 tgcagatatttataggaccaaaaatttaattaaccc 189  Q
    |||||||||||||||||||||||| |||||||||||    
T  32099379 tgcagatatttataggaccaaaaacttaattaaccc 32099414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 43661990 - 43661948
Alignment:
Q  154 tgcagatatttatag-gaccaaaaatttaattaacccaaaaat 195  Q
    ||||||||||||||| ||||||||| |||||||||||||||||    
T  43661990 tgcagatatttatagagaccaaaaacttaattaacccaaaaat 43661948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 17919091 - 17919132
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaacccaaaaa 194  Q
    |||||||||||||||| ||||||| |||||||||||||||||    
T  17919091 tgcagatatttatagggaccaaaattttaattaacccaaaaa 17919132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 45421817 - 45421784
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagcta 34  Q
    |||||||||||||||| |||||||||||||||||    
T  45421817 gaaaatttggacctaataataaaattttgagcta 45421784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 18365616 - 18365584
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagct 33  Q
    |||||||||||||||| ||||||||||||||||    
T  18365616 gaaaatttggacctaataataaaattttgagct 18365584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 193
Target Start/End: Complemental strand, 36610712 - 36610672
Alignment:
Q  154 tgcagatatttatagga-ccaaaaatttaattaacccaaaa 193  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  36610712 tgcagatatttataggaaccaaaaacttaattaacccaaaa 36610672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 189
Target Start/End: Original strand, 36766102 - 36766138
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaaccc 189  Q
    |||||||||||||||| ||||||||||||||||||||    
T  36766102 tgcagatatttatagggaccaaaaatttaattaaccc 36766138  T

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Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19693223 - 19693284
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19693223 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 19693284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 12783511 - 12783572
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12783511 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 12783572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33971486 - 33971546
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataat 61  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33971486 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataat 33971546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16270314 - 16270253
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  16270314 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcagaaccttttataatg 16270253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 5359311 - 5359252
Alignment:
Q  3 aaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5359311 aaatttggacttaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 5359252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13400303 - 13400242
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||    
T  13400303 gaaaatttggacctaaaaataaaattttgagctaatttattgtggtggaatcttttataatg 13400242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30753859 - 30753920
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  30753859 gaaaatttgaatctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 30753920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2857472 - 2857412
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataat 61  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  2857472 gaaaatttagacctaaaaataaaattttgagctaatttatttttgcggaactttttataat 2857412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 15053932 - 15053872
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||    
T  15053932 aaaatttggacctaaaaataaaattttgagctaatttatggtggtggaaccttttataatg 15053872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 945927 - 945988
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||| ||||||||||||||||||||| |||||||||| ||||| ||||||||||||||    
T  945927 gaaaatttagacctaaaaataaaattttgaactaatttattgtggcgcaaccttttataatg 945988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 22007229 - 22007290
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||| ||||||||| |||||||| || |||||||||| ||||||||||||||||||||    
T  22007229 gaaaatttagacctaaaagtaaaatttggacctaatttattgtggcggaaccttttataatg 22007290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 22423094 - 22423034
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||| ||||||||||||||| |||||  |||||||| ||||||||||    
T  22423094 aaaatttggacctaaaaaaaaaattttgagctaacttattacggcggaacgttttataatg 22423034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 20510091 - 20510152
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||| |||||||||||||||||||||||||||||  || ||||| | ||||||||    
T  20510091 gaaaatttggatctaaaaataaaattttgagctaatttattgcggaggaacgtgttataatg 20510152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 17122673 - 17122723
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaacccaaaaataaattatt 203  Q
    |||||||||||||||| |||||||| ||||||| ||| |||||||||||||    
T  17122673 tgcagatatttatagggaccaaaaacttaattagccctaaaataaattatt 17122723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 13400090 - 13400049
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaacccaaaaa 194  Q
    |||||||||||||||| |||||||| ||||||||||||||||    
T  13400090 tgcagatatttatagggaccaaaaacttaattaacccaaaaa 13400049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 19692645 - 19692600
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaacccaaaaataaa 198  Q
    |||||||||||||||| |||||||| |||||||||||| |||||||    
T  19692645 tgcagatatttatagggaccaaaaacttaattaacccataaataaa 19692600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 189
Target Start/End: Complemental strand, 7855696 - 7855660
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaaccc 189  Q
    |||||||||||||||| ||||||||||||||||||||    
T  7855696 tgcagatatttatagggaccaaaaatttaattaaccc 7855660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 189
Target Start/End: Original strand, 15516756 - 15516792
Alignment:
Q  154 tgcagatatttatagga-ccaaaaatttaattaaccc 189  Q
    ||||||||||||||||| |||||||||||||||||||    
T  15516756 tgcagatatttataggaaccaaaaatttaattaaccc 15516792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 27432535 - 27432596
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27432535 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 27432596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4034696 - 4034635
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4034696 gaaaatttagacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 4034635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6450166 - 6450105
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6450166 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 6450105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 7234590 - 7234651
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7234590 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 7234651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 14711608 - 14711547
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14711608 gaaaatttggacctaaaaataaaattttgagctaatttattatggcggaaccttttataatg 14711547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 42992516 - 42992455
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42992516 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 42992455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 18740760 - 18740821
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  18740760 gaaaatttggacctaaaaataaaattttgagctaatttattgcggcggaaccttttataatg 18740821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19928598 - 19928659
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  19928598 gaaaatttggacctaaaaataaaattttgagctaatttattgtggccgaaccttttataatg 19928659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20453058 - 20452997
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20453058 gaaattttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 20452997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 24334040 - 24333979
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24334040 gaaaatttagacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 24333979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 27189095 - 27189034
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  27189095 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcagaaccttttataatg 27189034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41906887 - 41906826
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41906887 gaaaatttgtacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 41906826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 7573060 - 7573120
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  7573060 aaaatttggacctaaaaacaaaattttgagctaatttattgtggcggaaccttttataatg 7573120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 22982011 - 22981952
Alignment:
Q  3 aaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22982011 aaatttggacttaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 22981952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4291762 - 4291823
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||    
T  4291762 gaaaatttggacctaaaaataaaattttgagctaatttattgcggtggaaccttttataatg 4291823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8315640 - 8315701
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  8315640 gaaaatttggacctaaaaataaaattttgagctaatttattggagcggaaccttttataatg 8315701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19000663 - 19000724
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19000663 gaaaatttgaaactaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 19000724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34818942 - 34818881
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  34818942 gaaaatttggacctaaaaataaaattttgaattaatttattgtggcggaaccttttataatg 34818881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 38983430 - 38983369
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||    
T  38983430 gaaaatttggacctaaaaataaatttttgagctaatttattgtggcggagccttttataatg 38983369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 33010433 - 33010374
Alignment:
Q  3 aaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33010433 aaatttagacgtaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 33010374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 2567504 - 2567552
Alignment:
Q  14 taaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2567504 taaaaataaaattttgagctaatttattgtggcggaaccttttataatg 2567552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 5597823 - 5597874
Alignment:
Q  11 acctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  5597823 acctaaaaataaaattttgagctaatttattgtagcggaaccttttataatg 5597874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4123223 - 4123162
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||| |||||| ||||||||||||||||||||||||| ||| |||| |||||||||||    
T  4123223 gaaaatttagacctagaaataaaattttgagctaatttattgtggtggaatcttttataatg 4123162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 24090135 - 24090188
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaacctt 54  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||    
T  24090135 gaaaatttggatctaaaaataaaattttgagctaatttattgtggtggaacctt 24090188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 38265557 - 38265498
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataat 61  Q
    ||||||||||| |||||||||||||||||||||| |||||  || ||||| |||||||||    
T  38265557 aaaatttggacttaaaaataaaattttgagctaagttattgcggaggaacgttttataat 38265498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 795908 - 795847
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| |||||||||||||||||||||| |||||  |  ||||| ||||||||||    
T  795908 gaaaatttggacttaaaaataaaattttgagctaacttattgcgaaggaacgttttataatg 795847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22671007 - 22670946
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| |||||||||||||||| ||||| |||||  || ||||| ||||||||||    
T  22671007 gaaaatttggacttaaaaataaaattttgtgctaacttattgcggaggaacattttataatg 22670946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 36816419 - 36816379
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttatt 41  Q
    |||||||||||| |||||||||||||||||||||| |||||    
T  36816419 gaaaatttggacttaaaaataaaattttgagctaacttatt 36816379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 796493 - 796539
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaacccaaaaataaat 199  Q
    |||||||||||||||| |||||||| ||||||||||| |||||||||    
T  796493 tgcagatatttatagggaccaaaaacttaattaaccctaaaataaat 796539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 27189681 - 27189715
Alignment:
Q  154 tgcagatatttataggaccaaaaatttaattaacc 188  Q
    |||||||||||||||||||||||| ||||||||||    
T  27189681 tgcagatatttataggaccaaaaacttaattaacc 27189715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 32299838 - 32299872
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  32299838 gaaaatttggacttaaaaataaaattttgagctaa 32299872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 188
Target Start/End: Complemental strand, 43370609 - 43370575
Alignment:
Q  154 tgcagatatttataggaccaaaaatttaattaacc 188  Q
    |||||||||||||||||||||||| ||||||||||    
T  43370609 tgcagatatttataggaccaaaaacttaattaacc 43370575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 43370699 - 43370749
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaacccaaaaataaattatt 203  Q
    |||||||||||||||| |||||||| ||||||||||| |||||||| ||||    
T  43370699 tgcagatatttatagggaccaaaaacttaattaaccctaaaataaaatatt 43370749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 8980034 - 8979973
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| |||||||||| ||||||||||| |||||  || | ||| ||||||||||    
T  8980034 gaaaatttggacttaaaaataaatttttgagctaacttattgcggagaaacgttttataatg 8979973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 22671340 - 22671307
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagcta 34  Q
    |||||||||||||||| |||||||||||||||||    
T  22671340 gaaaatttggacctaataataaaattttgagcta 22671307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 25001226 - 25001193
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagcta 34  Q
    |||||||||||||||| |||||||||||||||||    
T  25001226 gaaaatttggacctaataataaaattttgagcta 25001193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 32299503 - 32299536
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagcta 34  Q
    |||||||||||||||| |||||||||||||||||    
T  32299503 gaaaatttggacctaataataaaattttgagcta 32299536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 36816754 - 36816721
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagcta 34  Q
    |||||||||||||||| |||||||||||||||||    
T  36816754 gaaaatttggacctaataataaaattttgagcta 36816721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 193
Target Start/End: Original strand, 4035277 - 4035317
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaacccaaaa 193  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  4035277 tgcagatatttatagggaccaaaaacttaattaacccaaaa 4035317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 189
Target Start/End: Complemental strand, 6390644 - 6390608
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaaccc 189  Q
    |||||||||||||||| ||||||||||||||||||||    
T  6390644 tgcagatatttatagggaccaaaaatttaattaaccc 6390608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 18404394 - 18404338
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttat 58  Q
    ||||||| ||||||||||||||||||||| |||| |||||   ||||||| ||||||    
T  18404394 aaaatttagacctaaaaataaaattttgacctaacttattgcagcggaacgttttat 18404338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 20452845 - 20452797
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaacccaaaaataaatta 201  Q
    |||| ||||||||||| |||||||| |||||||| ||||||||||||||    
T  20452845 tgcaaatatttatagggaccaaaaacttaattaatccaaaaataaatta 20452797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31269664 - 31269725
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31269664 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 31269725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 869523 - 869584
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  869523 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 869584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3078451 - 3078512
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3078451 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 3078512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 23878678 - 23878739
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23878678 gaaaatttggacctaaaaataaaattttgagctaatttattctggcggaaccttttataatg 23878739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 24342745 - 24342806
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24342745 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 24342806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28055281 - 28055220
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  28055281 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 28055220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28065706 - 28065645
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  28065706 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 28065645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 33391105 - 33391166
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33391105 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 33391166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 36777946 - 36778007
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  36777946 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 36778007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 43729842 - 43729903
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43729842 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 43729903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 45454414 - 45454475
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  45454414 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 45454475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 50362470 - 50362531
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  50362470 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 50362531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 53328592 - 53328653
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  53328592 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 53328653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4994176 - 4994236
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataat 61  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  4994176 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataat 4994236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 15490784 - 15490723
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15490784 gaaaatttggatctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 15490723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16128610 - 16128671
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  16128610 gaaaatttggacctaaaaataaaatattgagctaatttattgtggcggaaccttttataatg 16128671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16644701 - 16644762
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  16644701 gaaaatttggacctaaaaataaaattttgagctaatttattgtcgcggaaccttttataatg 16644762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19006794 - 19006855
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  19006794 gaaaatttggacctaaaaataaaattttgagctaatttattctggcagaaccttttataatg 19006855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29166945 - 29167006
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  29166945 gaaaatttggacttaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 29167006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 30786599 - 30786538
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  30786599 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaactttttataatg 30786538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 37126952 - 37127013
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  37126952 gaaaatttggacctaaaaataaaattttgaactaatttattgtggcggaaccttttataatg 37127013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 43127710 - 43127649
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  43127710 gaaaatttggacctaaaaataaaattttgagctaatttattgtggtggaaccttttataatg 43127649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 47199064 - 47199125
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  47199064 gaaaatttggatctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 47199125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 53947636 - 53947697
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  53947636 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcagaaccttttataatg 53947697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 50762637 - 50762577
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  50762637 aaaatttggacctaaaaataaaattttgagctaatttattgtgtcggaaccttttataatg 50762577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 43660491 - 43660550
Alignment:
Q  3 aaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43660491 aaatttggtcctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 43660550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 10182255 - 10182194
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||    
T  10182255 gaaaatttggacctaaaaataaaattttgagctaatttatggtagcggaaccttttataatg 10182194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 30778781 - 30778720
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  30778781 gaaaatttggacctaaaaataaaattttgagctaatttattgcggcggaatcttttataatg 30778720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34779338 - 34779277
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34779338 gaaaaattggacttaaaaataaaattttgagctaatttattatggcggaaccttttataatg 34779277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 40126913 - 40126852
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||    
T  40126913 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcagaacattttataatg 40126852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 49612356 - 49612413
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttat 58  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  49612356 gaaaatttggacctaaaaataaaattttgagctaatttattgtggctgaaccttttat 49612413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 34226053 - 34225993
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||    
T  34226053 aaaatttggacctaaaaataaaattttgaaccaatttattgtggcggaaccttttataatg 34225993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 48585898 - 48585838
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataat 61  Q
    |||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  48585898 gaaaatttgggcctaaaaataaaattttgtgctaatttattgtggcggaaccttttataat 48585838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 55006179 - 55006119
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||    
T  55006179 aaaatttggacctaaaaataaaattttgagctaatttatggtggtggaaccttttataatg 55006119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1486976 - 1486915
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||  ||||||||| |||| |||||||||||||||    
T  1486976 gaaaatttggacctaaaaataaaattttgaattaatttattgtggcagaaccttttataatg 1486915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 50133552 - 50133491
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| ||| |||||||||||||||||||||||| |||||||| |||||||||||    
T  50133552 gaaaatttggacttaagaataaaattttgagctaatttattgtggcggaatcttttataatg 50133491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 51368532 - 51368593
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||| ||||||||||||||||||||||||||||| || ||||||||||||| ||||||    
T  51368532 gaaaatttagacctaaaaataaaattttgagctaatttgttgtggcggaacctttaataatg 51368593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 53629068 - 53629129
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||| ||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  53629068 gaaaagttggatctaaaaataaaattttgagctaatttattgtggtggaaccttttataatg 53629129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 30664170 - 30664230
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||| ||||||||| ||||||||| ||| ||||||||||||||||    
T  30664170 aaaatttggacctaaaaatacaattttgagttaatttattgtggtggaaccttttataatg 30664230  T

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Target: chr3; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 53658087 - 53658141
Alignment:
Q  6 tttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataat 61  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  53658087 tttggacctaaaaa-aaaattttgagctaatttattgtggcggaaccttttataat 53658141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 7587932 - 7587993
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||| | |||||||||||||||| |||| |||||||||| ||||    
T  7587932 gaaaatttggacctaaaaataacactttgagctaatttattgtggcagaaccttttacaatg 7587993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 23251699 - 23251639
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||||||||| |||||   ||||||| ||||||||||    
T  23251699 aaaatttggacctaaaaataaaattttgagctaacttattgcagcggaacgttttataatg 23251639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8339743 - 8339803
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||| |||||||||||||||||||| ||| ||||||  |||||||||||||||||||    
T  8339743 gaaaatttg-acctaaaaataaaattttgaactattttattgcggcggaaccttttataatg 8339803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 45009389 - 45009438
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaa 50  Q
    ||||||||||||||||||||||||||||||||||| |||||  |||||||    
T  45009389 gaaaatttggacctaaaaataaaattttgagctaacttattgcggcggaa 45009438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 4735864 - 4735912
Alignment:
Q  14 taaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||| ||||||||| | ||||||||    
T  4735864 taaaaataaaattttgagctaatttattatggcggaacatgttataatg 4735912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 25578471 - 25578531
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataat 61  Q
    |||||||||||| |||||||||||||||||||||| |||||  || ||||| |||||||||    
T  25578471 gaaaatttggacttaaaaataaaattttgagctaagttattgcggaggaactttttataat 25578531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16787566 - 16787627
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| ||| |||||||||||||||||| |||||  || ||||| ||||||||||    
T  16787566 gaaaatttggacttaagaataaaattttgagctaacttattgcggaggaacattttataatg 16787627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 45344053 - 45343996
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttat 58  Q
    ||||||||| |||||||||||||||||||| |||| |||||  |||||||| ||||||    
T  45344053 gaaaatttgaacctaaaaataaaattttgacctaacttattgcggcggaacgttttat 45343996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 50361881 - 50361848
Alignment:
Q  155 gcagatatttataggaccaaaaatttaattaacc 188  Q
    ||||||||||||||||||||||||||||||||||    
T  50361881 gcagatatttataggaccaaaaatttaattaacc 50361848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 36253354 - 36253318
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaattt 38  Q
    |||||||||||||||||||||| ||||||||||||||    
T  36253354 aaaatttggacctaaaaataaatttttgagctaattt 36253318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 154 - 189
Target Start/End: Complemental strand, 15288538 - 15288503
Alignment:
Q  154 tgcagatatttataggaccaaaaatttaattaaccc 189  Q
    |||||||||||||||||||||||| |||||||||||    
T  15288538 tgcagatatttataggaccaaaaacttaattaaccc 15288503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 33224634 - 33224673
Alignment:
Q  4 aatttggacctaaaaataaaattttgagctaatttatttt 43  Q
    ||||||||||||||||| ||||||||||||||||| ||||    
T  33224634 aatttggacctaaaaatgaaattttgagctaatttttttt 33224673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 42367826 - 42367865
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttatt 41  Q
    ||||||||||| |||||||||||||||||||||| |||||    
T  42367826 aaaatttggacttaaaaataaaattttgagctaacttatt 42367865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 47199277 - 47199323
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaacccaaaaataaat 199  Q
    |||||||||||||||| |||||||| ||||||||||| |||||||||    
T  47199277 tgcagatatttatagggaccaaaaacttaattaaccctaaaataaat 47199323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 51324723 - 51324689
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaa 35  Q
    ||||||||| |||||||||||||||||||||||||    
T  51324723 gaaaatttgaacctaaaaataaaattttgagctaa 51324689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 12015452 - 12015485
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagcta 34  Q
    |||||||||||||||| |||||||||||||||||    
T  12015452 gaaaatttggacctaataataaaattttgagcta 12015485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 19878133 - 19878166
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagcta 34  Q
    |||||||||||||||| |||||||||||||||||    
T  19878133 gaaaatttggacctaataataaaattttgagcta 19878166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19878467 - 19878527
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| ||||| |||||||||||||||| |||||  || ||||| ||||||||||    
T  19878467 gaaaatttggacttaaaa-taaaattttgagctaacttattgcggaggaacgttttataatg 19878527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 25578137 - 25578170
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagcta 34  Q
    |||||||||||||||| |||||||||||||||||    
T  25578137 gaaaatttggacctaagaataaaattttgagcta 25578170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 34266114 - 34266073
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaacccaaaaa 194  Q
    |||||||||||||||| |||||||| ||||||||||||||||    
T  34266114 tgcagatatttatagggaccaaaaacttaattaacccaaaaa 34266073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 193
Target Start/End: Complemental strand, 8874362 - 8874322
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaacccaaaa 193  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  8874362 tgcagatatttatagggaccaaaaacttaattaacccaaaa 8874322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 24342158 - 24342114
Alignment:
Q  157 agatatttataggaccaaaaatttaattaacccaaaaataaatta 201  Q
    |||||||||||||  |||||| ||||||||||||||| |||||||    
T  24342158 agatatttatagggacaaaaaattaattaacccaaaattaaatta 24342114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 193
Target Start/End: Original strand, 30787154 - 30787194
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaacccaaaa 193  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  30787154 tgcagatatttatagggaccaaaaacttaattaacccaaaa 30787194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 32245758 - 32245695
Alignment:
Q  1 gaaaatttggacctaaaaataaaatt--ttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| |||||| ||||    ||| ||||||||||| ||||||||||||||||||||    
T  32245758 gaaaatttggacataaaaaaaaaaaaaattgtgctaatttattgtggcggaaccttttataatg 32245695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12620365 - 12620304
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12620365 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 12620304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 36218658 - 36218599
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataa 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36218658 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataa 36218599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13803317 - 13803256
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13803317 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 13803256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16709170 - 16709109
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16709170 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 16709109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 10972502 - 10972442
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10972502 aaaatttgaacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 10972442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 25553628 - 25553568
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25553628 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaactttttataatg 25553568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9737566 - 9737627
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  9737566 gaaaatttggacctaaaaataaaattttaagctaatttattgtggcggaaccttttataatg 9737627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 37741996 - 37742057
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37741996 gaaaatttgaacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 37742057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41178737 - 41178676
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  41178737 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcagaaccttttataatg 41178676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 45301339 - 45301400
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  45301339 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcagaaccttttataatg 45301400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17614969 - 17614908
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  17614969 gaaaatttggatctaaaaataaaattttgagttaatttattgtggcggaaccttttataatg 17614908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18549541 - 18549480
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  18549541 gaaaattttgacctaaaaataaaattttgagctaatttattgtggtggaaccttttataatg 18549480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 31653389 - 31653328
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  31653389 gaaaatttagacctaaaaatgaaattttgagctaatttattgtggcggaaccttttataatg 31653328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 40855152 - 40855091
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  40855152 gaaaatttggatctaaaaataaaattttgagttaatttattgtggcggaaccttttataatg 40855091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 20973274 - 20973214
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||    
T  20973274 aaaatttggacctaaaaataaaattttgagctaatttagtgtggcggaaccatttataatg 20973214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 10214887 - 10214941
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaacctttt 56  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  10214887 aaaatttgaacctaaaaataaaattttgagctaatttattgtggcggaacctttt 10214941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37850350 - 37850288
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagct-aatttattttggcggaaccttttataatg 62  Q
    ||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  37850350 gaaaatttggatctaaaaataaaattttgagctaaatttattgtggcggaaccttttataatg 37850288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2431287 - 2431348
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||| ||||||||||||||||||| ||||||||| ||| ||||||||||||||||    
T  2431287 gaaaatttggatctaaaaataaaattttgagttaatttattgtggtggaaccttttataatg 2431348  T

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Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 20505971 - 20506032
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||| ||||||||||||||||||| ||||||||| ||| ||||||||||||||||    
T  20505971 gaaaatttggatctaaaaataaaattttgagttaatttattgtggtggaaccttttataatg 20506032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 35516380 - 35516441
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  35516380 gaaaatttggatctaaaaataaaattttgagctaatttattgtgctggaaccttttataatg 35516441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 43271157 - 43271218
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||| ||||||||||  |||||||||||||||||||| ||||||||||||||||||||    
T  43271157 gaaaattttgacctaaaaaagaaattttgagctaatttattgtggcggaaccttttataatg 43271218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 7662405 - 7662344
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||  ||||||||||||||||| |||||||||||| ||||| ||||||||||||||    
T  7662405 gaaaatttgagcctaaaaataaaattttaagctaatttattgtggcgaaaccttttataatg 7662344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 44300649 - 44300710
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||| ||||||||| |||||||| || |||||||||| ||||||||||||||||||||    
T  44300649 gaaaatttagacctaaaagtaaaatttggacctaatttattgtggcggaaccttttataatg 44300710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 6708509 - 6708557
Alignment:
Q  14 taaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  6708509 taaaaataaaattttgagctaatctattgtggcggaaccttttataatg 6708557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 14542228 - 14542267
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttat 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14542228 gaaaatttggacctaaaaataaaattttgagctaatttat 14542267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 39375143 - 39375198
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaacctttt 56  Q
    |||||||||| |||||||||||||||||||||||||||||| ||| ||||| ||||    
T  39375143 gaaaatttgggcctaaaaataaaattttgagctaatttattgtggtggaacatttt 39375198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3201825 - 3201764
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||| |||||||||||||||| ||||| |||  |||| ||||||||||    
T  3201825 gaaaatttggacctaaaagtaaaattttgagctaacttattgtggatgaacattttataatg 3201764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 7748674 - 7748613
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| |||||||||||||||||||||| |||||  || ||||| ||||||||||    
T  7748674 gaaaatttggacttaaaaataaaattttgagctaacttattgcggaggaacgttttataatg 7748613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42520988 - 42521049
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||| ||| |||||||||||||||||||||| ||||| ||| ||||| ||||||||||    
T  42520988 gaaaatttagacttaaaaataaaattttgagctaacttattgtggaggaacgttttataatg 42521049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 7401684 - 7401624
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||| |||||||||||||||||||||| ||||| ||| ||||| |||| |||||    
T  7401684 aaaatttggacttaaaaataaaattttgagctaacttattgtggaggaacattttgtaatg 7401624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 39375354 - 39375400
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaacccaaaaataaat 199  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||    
T  39375354 tgcagatatttatagggaccaaaaacttaattaacccaaaaataaat 39375400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39670427 - 39670366
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||| |||||||||||||||||| |||| |||||  || ||||| ||||||||||    
T  39670427 gaaaatttggatctaaaaataaaattttgaactaacttattgcggaggaacgttttataatg 39670366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 33666635 - 33666675
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttatt 41  Q
    |||||||||||| |||||||||||||||||||||| |||||    
T  33666635 gaaaatttggacttaaaaataaaattttgagctaacttatt 33666675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 5363691 - 5363737
Alignment:
Q  17 aaataaaatttt-gagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||||||    
T  5363691 aaataaaatttttgagttaatttattgtggcggaaccttttataatg 5363737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 22166602 - 22166560
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaacccaaaaat 195  Q
    |||||||||||||||| |||||||| |||||||||||||||||    
T  22166602 tgcagatatttatagggaccaaaaacttaattaacccaaaaat 22166560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 6206200 - 6206167
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagcta 34  Q
    |||||||||||||||| |||||||||||||||||    
T  6206200 gaaaatttggacctaataataaaattttgagcta 6206167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 6244483 - 6244454
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttga 30  Q
    ||||||||||||||||||||||||||||||    
T  6244483 gaaaatttggacctaaaaataaaattttga 6244454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 7749049 - 7749016
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagcta 34  Q
    |||||||||||||||| |||||||||||||||||    
T  7749049 gaaaatttggacctaataataaaattttgagcta 7749016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 8094860 - 8094823
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaattt 38  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  8094860 gaaaatttcgacctaaaaatcaaattttgagctaattt 8094823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 38063097 - 38063064
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaa 35  Q
    ||||||||||||||||||||||||||||| ||||    
T  38063097 aaaatttggacctaaaaataaaattttgaactaa 38063064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 189
Target Start/End: Complemental strand, 33666050 - 33666014
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaaccc 189  Q
    |||||||||||||||| ||||||||||||||||||||    
T  33666050 tgcagatatttatagggaccaaaaatttaattaaccc 33666014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 40855726 - 40855774
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaacccaaaaataaatta 201  Q
    |||| ||||||||||| ||||||||||||||||| || |||||||||||    
T  40855726 tgcaaatatttatagggaccaaaaatttaattaatcctaaaataaatta 40855774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 189
Target Start/End: Complemental strand, 45416339 - 45416303
Alignment:
Q  154 tgcagatatttata-ggaccaaaaatttaattaaccc 189  Q
    |||||||||||||| ||||||||||||||||||||||    
T  45416339 tgcagatatttataaggaccaaaaatttaattaaccc 45416303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2207665 - 2207726
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2207665 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 2207726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 17964139 - 17964079
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17964139 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 17964079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4008880 - 4008941
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4008880 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 4008941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 14007071 - 14007010
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14007071 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 14007010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 35767096 - 35767157
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  35767096 gaaaatttggacctaaaaataaaattttgagttaatttattttggcggaaccttttataatg 35767157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 47632724 - 47632785
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  47632724 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 47632785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 26507634 - 26507574
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26507634 aaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 26507574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 31267035 - 31267095
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31267035 aaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 31267095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 10371655 - 10371714
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataat 61  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10371655 aaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataat 10371714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 26911240 - 26911299
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataa 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26911240 gaaaatttggacctaaaaataaaattttgagctaatttattttggtggaaccttttataa 26911299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4574145 - 4574206
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  4574145 gaaaatttggacctaaaaataaaattttgaactaatttattgtggcggaaccttttataatg 4574206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10372831 - 10372892
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  10372831 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcgaaaccttttataatg 10372892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10383160 - 10383221
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  10383160 gaaaatttggacctaaaaataaaattttgaactaatttattgtggcggaaccttttataatg 10383221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15358412 - 15358473
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15358412 gaaaattttgacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 15358473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25137019 - 25137080
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  25137019 gaaaatttggacctaaaaataaaattttgagttaatttattgtggcggaaccttttataatg 25137080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 26451209 - 26451148
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  26451209 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaatcttttataatg 26451148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31861694 - 31861755
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31861694 gaaaatatggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 31861755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 36796061 - 36796000
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  36796061 gaaaatttggacctaaaaataaaattttgagctaatttattgtgacggaaccttttataatg 36796000  T

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Target: chr1; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 48624335 - 48624396
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  48624335 gaaaatttggacctaaaaataaaattttgagctaatttattgtggctgaaccttttataatg 48624396  T

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Target: chr1; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 48723553 - 48723492
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  48723553 gaaaatttggacttaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 48723492  T

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Target: chr1; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 4647209 - 4647149
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4647209 aaaatttgcacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 4647149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14421298 - 14421238
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataat 61  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  14421298 gaaaatttggacctaaaaataaaattttgagcttatttattgtggcggaaccttttataat 14421238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4486962 - 4486901
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||    
T  4486962 gaaaatttggacctaaaaataaaattttgagctactttatggtggcggaaccttttataatg 4486901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 14744011 - 14744072
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||    
T  14744011 gaaaatttggacctagaaataaaattttgagctaatttattgtggcgaaaccttttataatg 14744072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32037335 - 32037396
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||    
T  32037335 gaaaatttggatctaaaaataaaattttgagctaatttattgtgacggaaccttttataatg 32037396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 34076129 - 34076190
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||    
T  34076129 gaaaatttggacttaaaaataaaattttgagctaatttattgtggcggaatcttttataatg 34076190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 46667645 - 46667584
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  46667645 gaaaatttagacctaaaaataaaattttgagctaatttattgtggcagaaccttttataatg 46667584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 48468303 - 48468364
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||    
T  48468303 gaaaatttggacataaaaataaaattttgagctaatttattgtggcagaaccttttataatg 48468364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 52760528 - 52760467
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  52760528 gaaaatttggatctaaaaataacattttgagctaatttattgtggcggaaccttttataatg 52760467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 45583632 - 45583692
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataat 61  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  45583632 gaaaatttggatctaaaaataaaattttgagctaatttattgtggcggaaccttttttaat 45583692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 4057828 - 4057767
Alignment:
Q  2 aaaatttggacctaaaaataaaatttt-gagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  4057828 aaaatttggatctaaaaataaaatttttgagctaatttattgtggcggaaccttttataatg 4057767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10658688 - 10658749
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||  |||||||||||||||||||||||||||| |||| |||||||||||||||    
T  10658688 gaaaatttggatataaaaataaaattttgagctaatttattgtggctgaaccttttataatg 10658749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 14410962 - 14410901
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||| |||||||| |||||||||| ||||||||| ||||||||||||||||||||    
T  14410962 gaaaatttggatctaaaaattaaattttgagttaatttattgtggcggaaccttttataatg 14410901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28254003 - 28253942
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||| |||||||||||||||    
T  28254003 gaaaatttggacctaaaaataattttttgagctaatttattgtggcagaaccttttataatg 28253942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 45194497 - 45194436
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||| |||||||||||||||||||||||||||  | |||||||||||||||||    
T  45194497 gaaaatttggacccaaaaataaaattttgagctaatttattgcgacggaaccttttataatg 45194436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 10895768 - 10895708
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||  ||||||||||    
T  10895768 aaaatttggacctaaaaataaaattttgagctaacttattatggcggaatgttttataatg 10895708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 43030330 - 43030270
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||| |||||||||||||||||||||||||||||  |||||||| ||||||||||    
T  43030330 aaaatttggatctaaaaataaaattttgagctaatttattgcggcggaacattttataatg 43030270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 52526870 - 52526808
Alignment:
Q  1 gaaaatttggacct-aaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||||    
T  52526870 gaaaatttggacattaaaaataaaattttgagctaatttattgtggccgaaccttttataatg 52526808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 7587018 - 7587079
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||| ||||||||||||||||||||||||||||||| || | ||| |||||||||||    
T  7587018 gaaaatttgaacctaaaaataaaattttgagctaatttattgtgacagaatcttttataatg 7587079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 7603745 - 7603685
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||||  ||||||||| | |||||||| |||||||||    
T  7603745 aaaatttggacctaaaaataaaattttgaattaatttattgtagcggaaccatttataatg 7603685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 26136201 - 26136142
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||| ||||||||||||||  ||| ||||||||| ||||||||||||||||||||    
T  26136201 gaaaatttggatctaaaaataaaatt--gagttaatttattgtggcggaaccttttataatg 26136142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 36449585 - 36449631
Alignment:
Q  16 aaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||    
T  36449585 aaaataaaattttgagctaatttattgtggcagaaccttttataatg 36449631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 40723568 - 40723629
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| |||||||||||||||||||||| |||||  || ||||| ||||||||||    
T  40723568 gaaaatttggacttaaaaataaaattttgagctaacttattgcggaggaacgttttataatg 40723629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 45336473 - 45336436
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaattt 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  45336473 gaaaatttggacctaaaaataaaattttgagctaattt 45336436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 52710901 - 52710840
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| |||||||||||||||||||||| |||||  || ||||| ||||||||||    
T  52710901 gaaaatttggacttaaaaataaaattttgagctaacttattgcggaggaacgttttataatg 52710840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9130318 - 9130278
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttatt 41  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  9130318 gaaaatttggacctaaaaataaaattttgagctaacttatt 9130278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 6057044 - 6057094
Alignment:
Q  154 tgcagatatttatagga-ccaaaaatttaattaacccaaaaataaattatt 203  Q
    ||||||||||||||||| ||||||| ||||||||||| |||||||||||||    
T  6057044 tgcagatatttataggaaccaaaaacttaattaaccctaaaataaattatt 6057094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 14006858 - 14006812
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaacccaaaaataaat 199  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||    
T  14006858 tgcagatatttatagggaccaaaaacttaattaacccaaaaataaat 14006812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 46184458 - 46184399
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||| | ||||||||||||||  ||| ||||||||| ||||||||||||||||||||    
T  46184458 gaaaatttgaatctaaaaataaaatt--gagttaatttattgtggcggaaccttttataatg 46184399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 45716973 - 45716912
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| ||| |||||||||||||||||| |||||  || ||||| ||||||||||    
T  45716973 gaaaatttggacttaagaataaaattttgagctaacttattgcggaggaacattttataatg 45716912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 48609599 - 48609636
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaattt 38  Q
    |||||||||||||||| |||||||||||||||||||||    
T  48609599 gaaaatttggacctaataataaaattttgagctaattt 48609636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 27850784 - 27850742
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaacccaaaaat 195  Q
    |||||||||||||||| |||||||| |||||||||||||||||    
T  27850784 tgcagatatttatagggaccaaaaacttaattaacccaaaaat 27850742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 14421084 - 14421035
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaacccaaaaataaattat 202  Q
    |||||||||||||||| |||||||| ||||||||||| |||| |||||||    
T  14421084 tgcagatatttatagggaccaaaaacttaattaaccctaaaaaaaattat 14421035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 31267246 - 31267287
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaacccaaaaa 194  Q
    |||||||||||||||| |||||||| ||||||||||||||||    
T  31267246 tgcagatatttatagggaccaaaaacttaattaacccaaaaa 31267287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 193
Target Start/End: Original strand, 16428321 - 16428361
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaacccaaaa 193  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  16428321 tgcagatatttatagggaccaaaaacttaattaacccaaaa 16428361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 23176120 - 23176084
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaattt 38  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  23176120 aaaatttggacttaaaaatcaaattttgagctaattt 23176084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 189
Target Start/End: Original strand, 35767309 - 35767345
Alignment:
Q  154 tgcagatatttatagg-accaaaaatttaattaaccc 189  Q
    |||||||||||||||| ||||||||||||||||||||    
T  35767309 tgcagatatttatagggaccaaaaatttaattaaccc 35767345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 185
Target Start/End: Original strand, 47209989 - 47210017
Alignment:
Q  157 agatatttataggaccaaaaatttaatta 185  Q
    |||||||||||||||||||||||||||||    
T  47209989 agatatttataggaccaaaaatttaatta 47210017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 58; Significance: 3e-24; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 42070 - 42009
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42070 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 42009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17023 - 16962
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  17023 gaaaatttggacctaaaaataaaattttgagttaatttattgtggcggaaccttttataatg 16962  T

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Target: scaffold0029; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 48188 - 48127
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  48188 gaaaatttggacctaaaaataaaattttgagctaatttattgtagcggaaccttttataatg 48127  T

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Target: chr7 (Bit Score: 58; Significance: 3e-24; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 11620075 - 11620014
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11620075 gaaaatttggacataaaaataaaattttgagctaatttattttggcggaaccttttataatg 11620014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17314729 - 17314668
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17314729 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 17314668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 21202352 - 21202413
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21202352 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 21202413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 23023594 - 23023655
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23023594 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 23023655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 34651658 - 34651719
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34651658 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 34651719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7208071 - 7208131
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataat 61  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7208071 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataat 7208131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 14962626 - 14962686
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataat 61  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14962626 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataat 14962686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15392098 - 15392158
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataat 61  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15392098 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcggaaccttttataat 15392158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9900609 - 9900670
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  9900609 gaaaatttggacctaaaaataaaattttgagctaatttattatgacggaaccttttataatg 9900670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 39035915 - 39035976
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39035915 gaaaatttggacttaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 39035976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 45983656 - 45983595
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  45983656 gaaaatttggacttaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 45983595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 45986261 - 45986322
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  45986261 gaaaatttggacctaaaaataaaattttgagctaatttattgtggcagaaccttttataatg 45986322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23064474 - 23064414
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataat 61  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  23064474 gaaaatttggacttaaaaataaaattttgagctaatttattgtggcggaaccttttataat 23064414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 28642512 - 28642452
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  28642512 aaaatttggacctaaaaataaaattttgagctaatttattgtggtggaaccttttataatg 28642452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 5029282 - 5029341
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataa 60  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  5029282 gaaaatttggacctaaatataaaattttgagctaatttattttggcagaaccttttataa 5029341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2510700 - 2510639
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  2510700 gaaaatttggacctaaaaataaaattttgaattaatttattgtggcggaaccttttataatg 2510639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17920714 - 17920775
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17920714 gaaaatttagaccaaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 17920775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30740740 - 30740801
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  30740740 gaaaatatggacctaaaaataaaattttgagctaatttattgtagcggaaccttttataatg 30740801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 36040013 - 36040074
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  36040013 gaaaatttggatctaaaaataaaattttgagttaatttattgtggcggaaccttttataatg 36040074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 24424350 - 24424411
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||| |||||||||||||||||||||| ||||||||| |||||||||||| |||||||    
T  24424350 gaaaatttagacctaaaaataaaattttgagttaatttattgtggcggaaccttctataatg 24424411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 33574905 - 33574844
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||| |||||||| | |||||||||||||||||||| ||||||||||||||||||||    
T  33574905 gaaaatttgcacctaaaattcaaattttgagctaatttattgtggcggaaccttttataatg 33574844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 42335595 - 42335656
Alignment:
Q  2 aaaatttggacctaaaaataaaatttt-gagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||    
T  42335595 aaaatttggacctaaaaataaaatttttgagctaaattattgtggcggaaccttttataatg 42335656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 47229635 - 47229689
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttt 55  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||    
T  47229635 gaaaatttggatctaaaaataaaattttgagctaatttattgtggctgaaccttt 47229689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 46158134 - 46158194
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataat 61  Q
    |||||||| |||| |||||||||||||||| |||||||||| ||||| |||||||||||||    
T  46158134 gaaaatttagaccaaaaaataaaattttgaactaatttattgtggcgaaaccttttataat 46158194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 47784882 - 47784944
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattt-tggcggaaccttttataatg 62  Q
    |||||||||||||||||||||||||||| ||||  ||| ||| ||||||||||||||||||||    
T  47784882 gaaaatttggacctaaaaataaaattttaagcttttttttttatggcggaaccttttataatg 47784944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41098431 - 41098370
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||| ||||||| |||||||||||||||||||||| |||||  || ||||| ||||||||||    
T  41098431 gaaattttggacttaaaaataaaattttgagctaacttattgcggaggaacgttttataatg 41098370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 498767 - 498727
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttatt 41  Q
    |||||||||||| ||||||||||||||| ||||||||||||    
T  498767 gaaaatttggacttaaaaataaaattttaagctaatttatt 498727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 7626587 - 7626543
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttgg 45  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||    
T  7626587 gaaaatttggatctaaaaattaaattttgagctaattttttttgg 7626543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 33772457 - 33772517
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||| |||||||||||||||||||||| |||||  || ||||  ||||||||||    
T  33772457 aaaatttggacttaaaaataaaattttgagctaacttattgcggaggaatattttataatg 33772517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 154 - 189
Target Start/End: Complemental strand, 47784306 - 47784271
Alignment:
Q  154 tgcagatatttataggaccaaaaatttaattaaccc 189  Q
    |||||||||||||||||||||||| |||||||||||    
T  47784306 tgcagatatttataggaccaaaaacttaattaaccc 47784271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 499101 - 499068
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagcta 34  Q
    |||||||||||||||| |||||||||||||||||    
T  499101 gaaaatttggacctaataataaaattttgagcta 499068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 27428796 - 27428763
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagcta 34  Q
    |||||||||||||||| |||||||||||||||||    
T  27428796 gaaaatttggacctaataataaaattttgagcta 27428763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 33772123 - 33772156
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagcta 34  Q
    |||||||||||||||| |||||||||||||||||    
T  33772123 gaaaatttggacctaataataaaattttgagcta 33772156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 41327510 - 41327571
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||| |||||||||  ||||||||||||||||| || ||| ||||| || |||||||    
T  41327510 gaaaatttgaacctaaaaaacaaattttgagctaattttttgtggaggaactttgtataatg 41327571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 47228991 - 47228946
Alignment:
Q  154 tgcagatatttata-ggaccaaaaatttaattaacccaaaaataaa 198  Q
    |||||||||||||| |||||||||| |||||||| |||||||||||    
T  47228991 tgcagatatttataaggaccaaaaacttaattaatccaaaaataaa 47228946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 47463639 - 47463700
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||| ||||||| ||||||||||||||| || |||||  || ||||| ||||||||||    
T  47463639 gaaaatttagacctaacaataaaattttgagccaacttattgcggaggaacgttttataatg 47463700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 6972377 - 6972413
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaattt 38  Q
    |||||||||||||| |||| |||||||||||||||||    
T  6972377 aaaatttggacctagaaatcaaattttgagctaattt 6972413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27428462 - 27428422
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttatt 41  Q
    |||||||||||| ||||||||||||||| |||||| |||||    
T  27428462 gaaaatttggacttaaaaataaaattttaagctaacttatt 27428422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0991 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 911 - 850
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  911 gaaaatttggacctaaaactaaaattttgagctaatttattgtggcggaaccttttataatg 850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0493 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0493
Description:

Target: scaffold0493; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6892 - 6831
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  6892 gaaaatttggacctaaaaataaaattttgagctaagttattgtggcggaaccttttataatg 6831  T

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Target: scaffold0618 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 9346 - 9286
Alignment:
Q  2 aaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9346 aaaatttgcacctaaaaataaaattttgagctaatttattgtggcggaaccttttataatg 9286  T

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Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 235564 - 235625
Alignment:
Q  1 gaaaatttggacctaaaaataaaattttgagctaatttattttggcggaaccttttataatg 62  Q
    |||||||| |||||||||||||||||||||| ||| ||||| ||| ||||| ||||||||||    
T  235564 gaaaatttagacctaaaaataaaattttgagataacttattgtggaggaacgttttataatg 235625  T

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