View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21660_high_32 (Length: 293)
Name: NF21660_high_32
Description: NF21660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21660_high_32 |
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Alignment Details
Target: chr4 (Bit Score: 175; Significance: 3e-94; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 84 - 282
Target Start/End: Complemental strand, 10768657 - 10768459
Alignment:
| Q |
84 |
tttgaggttaagtggaaatatatttgtatttatctcaaccaagcatttacttagggactttgtttggtgtacattcagatttccactaatggaggatcga |
183 |
Q |
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| T |
10768657 |
tttgaggttaagtggaaatatatttgtatttatctcaaccaagcatttacttagggactttgttaggtgtacattcagatttccacttatggaggattga |
10768558 |
T |
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| Q |
184 |
tccatgacatgtaataaaagtatgctttcctattgcaagctagtagtactcattagtaggaaaaagagttttcaaaacaagtcaatgtaatgagttcat |
282 |
Q |
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| T |
10768557 |
tccattacatataatcaaagtatgctttcctattgcaagctagtagtactcattagtaggaaaaagagttttcaaaacaagtcaatgtaatgagttcat |
10768459 |
T |
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