View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21660_low_11 (Length: 478)

Name: NF21660_low_11
Description: NF21660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21660_low_11
NF21660_low_11
[»] chr5 (63 HSPs)
chr5 (13-351)||(1215247-1215586)
chr5 (349-423)||(37722890-37722964)
chr5 (349-427)||(9764334-9764412)
chr5 (349-422)||(20523218-20523291)
chr5 (349-426)||(25935286-25935363)
chr5 (348-421)||(37145496-37145569)
chr5 (349-426)||(40090410-40090487)
chr5 (350-421)||(2721557-2721628)
chr5 (348-423)||(22303865-22303940)
chr5 (349-423)||(22766952-22767026)
chr5 (349-426)||(927299-927376)
chr5 (348-421)||(19533902-19533975)
chr5 (349-426)||(40809338-40809415)
chr5 (349-426)||(41762211-41762288)
chr5 (349-425)||(15374045-15374121)
chr5 (352-423)||(9764426-9764497)
chr5 (349-423)||(15373960-15374034)
chr5 (349-423)||(15804322-15804396)
chr5 (349-423)||(26281265-26281339)
chr5 (345-423)||(35379344-35379421)
chr5 (345-423)||(40809422-40809500)
chr5 (349-422)||(3563278-3563351)
chr5 (349-426)||(32390057-32390134)
chr5 (349-426)||(40643903-40643979)
chr5 (343-426)||(16515097-16515180)
chr5 (349-432)||(20523124-20523207)
chr5 (359-425)||(2316376-2316442)
chr5 (349-423)||(2316464-2316537)
chr5 (349-419)||(9894318-9894388)
chr5 (349-422)||(33245368-33245441)
chr5 (366-426)||(6634012-6634072)
chr5 (349-425)||(23092047-23092123)
chr5 (353-421)||(28828436-28828504)
chr5 (349-425)||(32250094-32250169)
chr5 (263-346)||(1207991-1208074)
chr5 (349-423)||(32470967-32471039)
chr5 (348-421)||(14834826-14834899)
chr5 (368-421)||(28828369-28828422)
chr5 (350-426)||(34982213-34982288)
chr5 (375-421)||(13243515-13243561)
chr5 (349-423)||(23091963-23092036)
chr5 (349-391)||(37241598-37241640)
chr5 (340-421)||(32389974-32390055)
chr5 (349-385)||(15270850-15270886)
chr5 (369-421)||(15804399-15804451)
chr5 (349-385)||(17542357-17542393)
chr5 (349-381)||(28489505-28489537)
chr5 (349-385)||(33146211-33146247)
chr5 (349-420)||(6634099-6634170)
chr5 (349-384)||(28490031-28490066)
chr5 (340-386)||(11601076-11601122)
chr5 (348-390)||(12479940-12479982)
chr5 (349-419)||(16515009-16515078)
chr5 (345-391)||(30519036-30519082)
chr5 (345-391)||(30559376-30559422)
chr5 (340-426)||(32470879-32470965)
chr5 (348-385)||(2550348-2550385)
chr5 (348-385)||(12064463-12064500)
chr5 (368-426)||(13243454-13243514)
chr5 (388-425)||(28489479-28489516)
chr5 (348-385)||(34105109-34105146)
chr5 (378-426)||(5658773-5658821)
chr5 (349-385)||(22305132-22305168)
[»] chr8 (47 HSPs)
chr8 (348-426)||(33986001-33986079)
chr8 (349-423)||(3853616-3853690)
chr8 (349-423)||(3858074-3858148)
chr8 (345-423)||(14800041-14800119)
chr8 (349-427)||(17110865-17110943)
chr8 (349-426)||(33377306-33377383)
chr8 (349-425)||(23011732-23011808)
chr8 (349-425)||(42711365-42711441)
chr8 (349-423)||(24044960-24045034)
chr8 (349-423)||(29257360-29257434)
chr8 (349-423)||(44889354-44889428)
chr8 (349-426)||(36103098-36103175)
chr8 (349-421)||(4156252-4156324)
chr8 (349-421)||(29482816-29482888)
chr8 (350-426)||(40046801-40046877)
chr8 (348-426)||(14236-14313)
chr8 (349-423)||(17110954-17111028)
chr8 (349-423)||(28324671-28324745)
chr8 (349-419)||(44346687-44346757)
chr8 (358-423)||(33902667-33902732)
chr8 (353-421)||(13404829-13404897)
chr8 (345-413)||(13404908-13404976)
chr8 (348-423)||(515540-515615)
chr8 (349-420)||(35979013-35979084)
chr8 (349-426)||(33902751-33902828)
chr8 (353-423)||(37268096-37268166)
chr8 (349-425)||(1088286-1088362)
chr8 (353-421)||(3853705-3853773)
chr8 (353-421)||(3858163-3858231)
chr8 (348-408)||(8049269-8049329)
chr8 (366-425)||(14991690-14991749)
chr8 (375-426)||(32626069-32626120)
chr8 (349-390)||(9982669-9982710)
chr8 (349-430)||(11744728-11744809)
chr8 (349-390)||(13144616-13144657)
chr8 (348-385)||(29611408-29611445)
chr8 (349-385)||(26520448-26520484)
chr8 (349-385)||(30444942-30444978)
chr8 (349-385)||(34008819-34008855)
chr8 (346-390)||(35404748-35404792)
chr8 (378-425)||(27322687-27322734)
chr8 (348-385)||(7202885-7202922)
chr8 (366-423)||(31807409-31807465)
chr8 (349-397)||(15186826-15186874)
chr8 (349-397)||(21465318-21465366)
chr8 (348-424)||(31976590-31976665)
chr8 (345-385)||(42739969-42740009)
[»] chr2 (49 HSPs)
chr2 (349-425)||(27033488-27033564)
chr2 (349-421)||(11532252-11532324)
chr2 (349-421)||(11793897-11793969)
chr2 (349-425)||(14365698-14365774)
chr2 (349-427)||(10480115-10480193)
chr2 (349-424)||(14537198-14537273)
chr2 (349-423)||(784878-784952)
chr2 (349-423)||(41461600-41461674)
chr2 (349-426)||(33189256-33189333)
chr2 (349-425)||(769034-769110)
chr2 (349-425)||(11141303-11141379)
chr2 (349-423)||(1583808-1583882)
chr2 (349-423)||(11716408-11716482)
chr2 (349-427)||(17905650-17905728)
chr2 (348-425)||(7228010-7228087)
chr2 (349-425)||(17180295-17180371)
chr2 (348-415)||(30698289-30698356)
chr2 (345-423)||(10244177-10244255)
chr2 (349-423)||(13017779-13017853)
chr2 (349-423)||(35047678-35047752)
chr2 (366-427)||(11684595-11684656)
chr2 (358-423)||(14365793-14365858)
chr2 (349-421)||(44256192-44256263)
chr2 (357-420)||(28740599-28740662)
chr2 (348-398)||(7167665-7167715)
chr2 (349-426)||(3092279-3092356)
chr2 (353-426)||(41461512-41461585)
chr2 (349-397)||(11794002-11794050)
chr2 (349-417)||(40026070-40026138)
chr2 (349-396)||(32839647-32839694)
chr2 (349-427)||(784789-784867)
chr2 (349-387)||(11607257-11607295)
chr2 (366-427)||(11716501-11716563)
chr2 (359-425)||(14954264-14954330)
chr2 (345-418)||(740709-740782)
chr2 (349-385)||(8736440-8736476)
chr2 (349-425)||(39630223-39630298)
chr2 (363-422)||(30751359-30751418)
chr2 (353-423)||(8735844-8735914)
chr2 (349-387)||(11595355-11595393)
chr2 (349-383)||(44255674-44255708)
chr2 (349-423)||(45094470-45094544)
chr2 (349-390)||(10480233-10480274)
chr2 (349-390)||(11532169-11532210)
chr2 (349-390)||(14954352-14954393)
chr2 (348-385)||(32840190-32840227)
chr2 (349-385)||(11684675-11684711)
chr2 (349-385)||(20935744-20935780)
chr2 (345-385)||(41585685-41585725)
[»] chr4 (52 HSPs)
chr4 (345-423)||(31473849-31473927)
chr4 (349-430)||(2125850-2125931)
chr4 (350-433)||(11040958-11041040)
chr4 (349-426)||(4896717-4896794)
chr4 (348-420)||(10633035-10633107)
chr4 (348-426)||(1112602-1112680)
chr4 (349-423)||(10128059-10128133)
chr4 (349-423)||(49111397-49111471)
chr4 (348-425)||(41498574-41498651)
chr4 (348-415)||(1539649-1539716)
chr4 (349-423)||(857324-857398)
chr4 (345-423)||(14982280-14982358)
chr4 (349-423)||(15660268-15660342)
chr4 (349-423)||(36455907-36455981)
chr4 (357-426)||(7352905-7352974)
chr4 (355-423)||(4896648-4896716)
chr4 (352-423)||(5715744-5715815)
chr4 (349-423)||(1107137-1107211)
chr4 (356-426)||(15660180-15660250)
chr4 (349-423)||(28845956-28846030)
chr4 (344-426)||(36456006-36456088)
chr4 (349-421)||(7352814-7352886)
chr4 (351-423)||(16516171-16516243)
chr4 (349-425)||(42844541-42844617)
chr4 (349-423)||(1112707-1112781)
chr4 (349-391)||(16300218-16300260)
chr4 (349-423)||(35470122-35470196)
chr4 (354-423)||(11348327-11348396)
chr4 (353-426)||(26250906-26250979)
chr4 (349-418)||(28845876-28845945)
chr4 (366-422)||(4441338-4441394)
chr4 (353-421)||(10127976-10128044)
chr4 (349-396)||(29091164-29091211)
chr4 (345-423)||(55266856-55266934)
chr4 (348-385)||(27284660-27284697)
chr4 (375-424)||(31742875-31742924)
chr4 (348-425)||(42776635-42776712)
chr4 (357-421)||(19461743-19461807)
chr4 (349-425)||(41139473-41139547)
chr4 (349-385)||(42775643-42775679)
chr4 (357-421)||(42844636-42844700)
chr4 (349-396)||(857266-857313)
chr4 (334-385)||(26250979-26251030)
chr4 (354-421)||(31742778-31742845)
chr4 (349-423)||(41498489-41498564)
chr4 (349-426)||(1107048-1107126)
chr4 (349-391)||(26534525-26534567)
chr4 (345-390)||(9451127-9451172)
chr4 (348-385)||(17727103-17727140)
chr4 (348-385)||(40338250-40338287)
chr4 (376-421)||(42542979-42543024)
chr4 (348-385)||(56339171-56339208)
[»] chr7 (51 HSPs)
chr7 (349-426)||(31632719-31632796)
chr7 (352-426)||(2057392-2057466)
chr7 (349-423)||(26162122-26162196)
chr7 (349-426)||(35776940-35777017)
chr7 (349-425)||(40110735-40110811)
chr7 (345-423)||(2057476-2057554)
chr7 (349-423)||(18789231-18789305)
chr7 (349-423)||(28539153-28539227)
chr7 (349-427)||(43955513-43955591)
chr7 (349-426)||(5644674-5644751)
chr7 (350-423)||(6498751-6498824)
chr7 (349-426)||(40110823-40110900)
chr7 (349-425)||(29065817-29065893)
chr7 (349-425)||(39342627-39342703)
chr7 (349-426)||(14603247-14603324)
chr7 (348-425)||(25189210-25189287)
chr7 (349-426)||(34388262-34388339)
chr7 (353-421)||(43955603-43955671)
chr7 (351-422)||(9784918-9784989)
chr7 (348-419)||(30629061-30629132)
chr7 (349-419)||(23455232-23455302)
chr7 (349-423)||(23548596-23548670)
chr7 (354-423)||(34398938-34399008)
chr7 (349-423)||(35455804-35455878)
chr7 (349-427)||(44915191-44915269)
chr7 (349-425)||(29639200-29639276)
chr7 (353-423)||(5644766-5644836)
chr7 (351-397)||(43791116-43791162)
chr7 (340-385)||(14790151-14790196)
chr7 (348-397)||(22391571-22391620)
chr7 (364-425)||(29195707-29195768)
chr7 (348-425)||(30524253-30524330)
chr7 (353-425)||(21635883-21635955)
chr7 (345-385)||(32650611-32650651)
chr7 (349-425)||(49052784-49052859)
chr7 (349-396)||(18789544-18789591)
chr7 (352-423)||(34388353-34388424)
chr7 (353-423)||(29065908-29065978)
chr7 (349-426)||(40854054-40854132)
chr7 (349-391)||(46069423-46069465)
chr7 (349-390)||(29639119-29639160)
chr7 (349-417)||(21635970-21636038)
chr7 (363-414)||(22351871-22351922)
chr7 (375-426)||(46481943-46481994)
chr7 (349-391)||(49052870-49052912)
chr7 (348-385)||(19865538-19865575)
chr7 (348-385)||(26415991-26416028)
chr7 (349-390)||(31632835-31632876)
chr7 (349-385)||(13814979-13815015)
chr7 (349-385)||(45984378-45984414)
chr7 (349-385)||(45988738-45988774)
[»] chr1 (54 HSPs)
chr1 (349-425)||(23536065-23536141)
chr1 (349-423)||(15034744-15034818)
chr1 (349-423)||(24273219-24273293)
chr1 (348-426)||(43622976-43623054)
chr1 (349-425)||(26501078-26501154)
chr1 (349-425)||(50005077-50005153)
chr1 (349-423)||(4038160-4038234)
chr1 (353-423)||(6470689-6470759)
chr1 (349-423)||(34756427-34756501)
chr1 (352-425)||(4038073-4038146)
chr1 (349-426)||(8224765-8224842)
chr1 (349-426)||(38277412-38277489)
chr1 (349-425)||(15034657-15034733)
chr1 (349-420)||(45565397-45565468)
chr1 (349-423)||(30190221-30190295)
chr1 (349-426)||(27935570-27935647)
chr1 (349-426)||(28632585-28632661)
chr1 (353-421)||(40264119-40264187)
chr1 (349-419)||(27804269-27804339)
chr1 (349-423)||(47165211-47165285)
chr1 (349-427)||(49659213-49659290)
chr1 (351-424)||(32287934-32288007)
chr1 (349-414)||(37448400-37448465)
chr1 (349-425)||(31166308-31166384)
chr1 (353-421)||(50005168-50005236)
chr1 (357-420)||(37036956-37037019)
chr1 (349-416)||(37447901-37447968)
chr1 (366-433)||(44410413-44410480)
chr1 (349-423)||(44410311-44410385)
chr1 (353-422)||(32573011-32573080)
chr1 (348-421)||(38277499-38277571)
chr1 (349-414)||(44570687-44570752)
chr1 (349-421)||(28745799-28745870)
chr1 (353-421)||(34756516-34756584)
chr1 (348-391)||(47541986-47542029)
chr1 (349-418)||(28745881-28745950)
chr1 (349-426)||(29446747-29446823)
chr1 (349-425)||(27804350-27804426)
chr1 (349-385)||(37447358-37447394)
chr1 (348-423)||(49216336-49216412)
chr1 (349-391)||(5474484-5474526)
chr1 (388-426)||(17502195-17502233)
chr1 (349-411)||(31195468-31195530)
chr1 (349-378)||(34003506-34003535)
chr1 (353-390)||(37214852-37214889)
chr1 (364-425)||(39589119-39589180)
chr1 (349-426)||(39887124-39887201)
chr1 (348-385)||(45565478-45565515)
chr1 (345-382)||(50471791-50471828)
chr1 (349-381)||(17502222-17502254)
chr1 (349-385)||(32128068-32128104)
chr1 (349-385)||(32572960-32572996)
chr1 (349-421)||(34003379-34003451)
chr1 (349-385)||(44571239-44571275)
[»] chr3 (49 HSPs)
chr3 (349-423)||(46672801-46672875)
chr3 (349-426)||(27251979-27252056)
chr3 (349-426)||(44692907-44692984)
chr3 (349-425)||(9129429-9129505)
chr3 (349-425)||(9137536-9137612)
chr3 (349-419)||(21307530-21307600)
chr3 (349-423)||(36397987-36398061)
chr3 (348-426)||(42005950-42006028)
chr3 (349-423)||(47767432-47767506)
chr3 (349-426)||(49457340-49457417)
chr3 (352-424)||(5415782-5415854)
chr3 (349-425)||(7302344-7302420)
chr3 (348-423)||(37054394-37054469)
chr3 (349-423)||(5415868-5415942)
chr3 (345-423)||(31189391-31189469)
chr3 (349-423)||(48947605-48947679)
chr3 (349-426)||(34088568-34088645)
chr3 (349-426)||(44436255-44436332)
chr3 (349-426)||(53129841-53129918)
chr3 (349-423)||(28092214-28092288)
chr3 (349-423)||(44692822-44692896)
chr3 (349-425)||(9129342-9129418)
chr3 (349-425)||(9137449-9137525)
chr3 (348-423)||(53470426-53470501)
chr3 (349-415)||(19475824-19475890)
chr3 (349-407)||(31070422-31070480)
chr3 (349-423)||(37321550-37321624)
chr3 (353-423)||(46429485-46429555)
chr3 (369-426)||(35279920-35279977)
chr3 (354-423)||(47284316-47284385)
chr3 (367-427)||(46001360-46001420)
chr3 (349-423)||(39110394-39110468)
chr3 (349-390)||(44436343-44436384)
chr3 (349-397)||(30766579-30766627)
chr3 (353-421)||(39215927-39215995)
chr3 (366-426)||(42130689-42130749)
chr3 (349-396)||(8762153-8762200)
chr3 (349-420)||(52527039-52527110)
chr3 (348-426)||(21730899-21730976)
chr3 (353-423)||(31070495-31070565)
chr3 (356-397)||(8762233-8762274)
chr3 (345-390)||(10793003-10793048)
chr3 (349-390)||(19475930-19475971)
chr3 (345-378)||(28182242-28182275)
chr3 (354-423)||(46635857-46635926)
chr3 (349-391)||(46706682-46706726)
chr3 (349-385)||(332012-332048)
chr3 (353-389)||(13339465-13339501)
chr3 (349-385)||(38506874-38506910)
[»] scaffold0169 (1 HSPs)
scaffold0169 (349-426)||(4072-4149)
[»] chr6 (21 HSPs)
chr6 (348-427)||(28918161-28918240)
chr6 (349-423)||(9285647-9285721)
chr6 (348-423)||(13487275-13487350)
chr6 (349-423)||(29889433-29889507)
chr6 (357-423)||(34244987-34245053)
chr6 (349-421)||(6919710-6919782)
chr6 (349-421)||(9763014-9763086)
chr6 (359-426)||(8574760-8574827)
chr6 (349-423)||(1368477-1368551)
chr6 (366-426)||(6919809-6919869)
chr6 (359-423)||(8574695-8574759)
chr6 (353-425)||(9763101-9763173)
chr6 (343-419)||(15299504-15299579)
chr6 (351-410)||(15299412-15299471)
chr6 (349-427)||(776165-776243)
chr6 (349-390)||(6358250-6358291)
chr6 (348-391)||(15832498-15832541)
chr6 (349-396)||(34364770-34364817)
chr6 (359-423)||(776080-776144)
chr6 (349-385)||(1195371-1195407)
chr6 (383-423)||(33733432-33733472)
[»] scaffold1562 (2 HSPs)
scaffold1562 (352-421)||(493-562)
scaffold1562 (360-426)||(402-468)
[»] scaffold1158 (2 HSPs)
scaffold1158 (352-421)||(2031-2100)
scaffold1158 (360-426)||(2125-2191)
[»] scaffold0129 (2 HSPs)
scaffold0129 (349-426)||(19195-19271)
scaffold0129 (349-421)||(19784-19855)
[»] scaffold0009 (2 HSPs)
scaffold0009 (340-423)||(41997-42080)
scaffold0009 (365-425)||(42079-42139)
[»] scaffold0318 (1 HSPs)
scaffold0318 (349-423)||(2867-2940)
[»] scaffold0048 (1 HSPs)
scaffold0048 (349-421)||(82945-83017)
[»] scaffold0044 (2 HSPs)
scaffold0044 (349-419)||(56359-56429)
scaffold0044 (352-391)||(56306-56345)
[»] scaffold0400 (1 HSPs)
scaffold0400 (349-422)||(4497-4570)
[»] scaffold0365 (1 HSPs)
scaffold0365 (349-422)||(5141-5214)
[»] scaffold0027 (1 HSPs)
scaffold0027 (349-422)||(10887-10960)
[»] scaffold0301 (1 HSPs)
scaffold0301 (349-421)||(7153-7225)
[»] scaffold0337 (1 HSPs)
scaffold0337 (360-425)||(15874-15938)
[»] scaffold0065 (2 HSPs)
scaffold0065 (360-425)||(2916-2980)
scaffold0065 (349-381)||(9585-9617)


Alignment Details
Target: chr5 (Bit Score: 275; Significance: 1e-153; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 13 - 351
Target Start/End: Complemental strand, 1215586 - 1215247
Alignment:
Q  13 ttgcatatttgtactcgtatactatcaaaggtgcacctacatataccgatcatacatgcatacacgtatatgcgcatacattaacagatataaatagcca 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1215586 ttgcatatttgtactcgtatactatcaaaggtgcacctacatataccgatcatacatgcatacacatatatgcgcatacattaacagatataaatagcca 1215487  T
Q  113 aacaaacatctataaaattaaacac--atatggttacaaaaaatataaacctaagacaagtgttcgcgtgggaaaataaagaatcatttcaaggctttaa 210  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1215486 aacaaacatctataaaattaaacacatatatggttacaaaaaatataaacctaagacaagtgttcgcgtggggaaataaagaatcatttcaaggctttaa 1215387  T
Q  211 ttttcgnnnnnnnnnncaaggtctttcaatgtcttcatcatgcgcttaccatcctacaaatttttgcatactatgatactacttatttctgtaaactaag 310  Q
    |||| |          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1215386 tttttg-aaaaaaaatcaaggtctttcaatgtcttcatcatgcgcttaccatcctacaaatttttgcatactatgatactacttacttctgtaaactaag 1215288  T
Q  311 catatgaaaattcaacaacatgaggattgaaattataaaat 351  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  1215287 catatgaaaattcaacaacatgaggattgaaattatgaaat 1215247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 37722890 - 37722964
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  37722890 aattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaatattcccccatccaaacacactct 37722964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 349 - 427
Target Start/End: Complemental strand, 9764412 - 9764334
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttagt 427  Q
    ||||||||| |||||| |||||||| ||||||||||||| ||| ||||| |||||||||||||||||||||||||||||    
T  9764412 aattcaccttaaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactcttagt 9764334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 349 - 422
Target Start/End: Original strand, 20523218 - 20523291
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactc 422  Q
    ||||||||| |||||| |||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  20523218 aattcaccttaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacacactc 20523291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 349 - 426
Target Start/End: Original strand, 25935286 - 25935363
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    ||||||||||||||||||||||||  |||| |||||||||||| ||||| | ||||||||||||||||||||||||||    
T  25935286 aattcacctcaaagtatttgaatttcctcataacattacattccctcaaaacattcccccatccaaacacactcttag 25935363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 348 - 421
Target Start/End: Original strand, 37145496 - 37145569
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||| | |||||||||||||||| ||||    
T  37145496 aaattcacctcaaagtatttgaattctctcataacattacattccctcaaaacattcccccatccaaacccact 37145569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 349 - 426
Target Start/End: Original strand, 40090410 - 40090487
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||||||||||||||||||||||  |||||||||||||||  ||||| | ||||||||||||||||||||||||||    
T  40090410 aattcacctcaaagtatttgaattccatcaaaacattacatttcctcaaaacattcccccatccaaacacactcttag 40090487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 350 - 421
Target Start/End: Original strand, 2721557 - 2721628
Alignment:
Q  350 attcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    ||||||||||||||| |||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||    
T  2721557 attcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 2721628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 348 - 423
Target Start/End: Original strand, 22303865 - 22303940
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||||||| ||||||||||||  |||||||||||||||| ||||| | |||||||||||||||||||||||    
T  22303865 aaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactct 22303940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 423
Target Start/End: Complemental strand, 22767026 - 22766952
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||| ||||||||||||||| |||||||||||| |||| ||||| | |||||||||||||||||||||||    
T  22767026 aattcaccttaaagtatttgaattccctcaaaacattatattccctcaaaacattcccccatccaaacacactct 22766952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 426
Target Start/End: Complemental strand, 927376 - 927299
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||||| |||||||||||||||| ||||||||| ||||||| ||||| | ||| ||||||||||||||||||||||    
T  927376 aattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttccccatccaaacacactcttag 927299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 421
Target Start/End: Original strand, 19533902 - 19533975
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    |||||||||||||||||||||||||| |||| |||||||||||| ||||| | ||||| |||||||||||||||    
T  19533902 aaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcctccatccaaacacact 19533975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 426
Target Start/End: Complemental strand, 40809415 - 40809338
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||| ||||||||| |||||||| |||||||||||| |||||||||| | ||| ||||||||||||||||||||||    
T  40809415 aattcaactcaaagtagttgaattccctcaaaacattatattctctcaaaacatttccccatccaaacacactcttag 40809338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 426
Target Start/End: Original strand, 41762211 - 41762288
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||||| |||||||||||||||| || |||||| ||||||| ||||| | ||||||||||||||||||||||||||    
T  41762211 aattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactcttag 41762288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 15374045 - 15374121
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    ||||||||| | |||| |||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||||||    
T  15374045 aattcaccttagagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 15374121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 9764426 - 9764497
Alignment:
Q  352 tcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||| | | |||||||||||||||||||||||    
T  9764426 tcacctcaaagtagttgaattccctcaaaacattacattccctcgaaacattcccccatccaaacacactct 9764497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 423
Target Start/End: Complemental strand, 15374034 - 15373960
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||| | ||||  |||||||||||||||||    
T  15374034 aattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaaattcttccatccaaacacactct 15373960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 423
Target Start/End: Complemental strand, 15804396 - 15804322
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||| ||||||||| |||||||| ||||||||| ||||||| ||||| | |||||||||||||||||||||||    
T  15804396 aattcaactcaaagtagttgaattccctcaaaacactacattccctcaaaacattcccccatccaaacacactct 15804322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 26281265 - 26281339
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||| |||||| |||||||| ||||||||||||||||| ||||| |  ||||||||||||||||||||||    
T  26281265 aattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacgttcccccatccaaacacactct 26281339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 345 - 423
Target Start/End: Complemental strand, 35379421 - 35379344
Alignment:
Q  345 ataaaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||| |||||| | ||| |||||||||||||||||||    
T  35379421 ataaaattcacttcaaagaatttgaattccctcaaaacattacattatctcaaaacatt-ccccatccaaacacactct 35379344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 345 - 423
Target Start/End: Original strand, 40809422 - 40809500
Alignment:
Q  345 ataaaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||||||| ||||||  ||||||| ||||||||||||||||||||||| | ||| ||||||| |||||||||||    
T  40809422 ataaaattcaccttaaagtagctgaattcactcaaaacattacattctctcaaaacatttccccatctaaacacactct 40809500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 349 - 422
Target Start/End: Complemental strand, 3563351 - 3563278
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactc 422  Q
    ||||||||| |||||| |||||||| ||||||||||||||||| ||||| | ||||||| ||||||||||||||    
T  3563351 aattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccctatccaaacacactc 3563278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 349 - 426
Target Start/End: Original strand, 32390057 - 32390134
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||| | |||| |  ||||||||||||||||||    
T  32390057 aattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaaattctctaatccaaacacactcttag 32390134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 349 - 426
Target Start/End: Original strand, 40643903 - 40643979
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    ||||||||| ||| || |||||||| ||||||||||||||||| ||||| | ||||||||||||||||||||||||||    
T  40643903 aattcaccttaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactcttag 40643979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 343 - 426
Target Start/End: Original strand, 16515097 - 16515180
Alignment:
Q  343 ttataaaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    ||||| |||||||||||||| | |||||||| ||||||||||||||||| || || | |||| | |||||||||||||||||||    
T  16515097 ttatagaattcacctcaaagaagttgaattccctcaaaacattacattccctaaaaacattctctcatccaaacacactcttag 16515180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 20523207 - 20523124
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttagtgttga 432  Q
    |||||||||||||||| |||||||| |||| || ||||||||| ||||| | |||| |||||||||||||||||| | ||||||    
T  20523207 aattcacctcaaagtagttgaattccctcagaatattacattccctcaaaacattctcccatccaaacacactctaattgttga 20523124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 359 - 425
Target Start/End: Complemental strand, 2316442 - 2316376
Alignment:
Q  359 aaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||| |||||||| ||||||| ||||||||| ||||| | |||||||||||||||||||||||||    
T  2316442 aaagtagttgaattccctcaaaatattacattccctcaaaacattcccccatccaaacacactctta 2316376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 2316464 - 2316537
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||| | |||   |||||||||||||||||    
T  2316464 aattcacctcaaagtagttgaattctctcaaaacattacattccctcaaaacatt-ttccatccaaacacactct 2316537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 419
Target Start/End: Original strand, 9894318 - 9894388
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacaca 419  Q
    ||||||||||||||||||||||||| ||   |||||||||||| ||||| | |||||||||||||||||||    
T  9894318 aattcacctcaaagtatttgaattccctggtaacattacattccctcaaaacattcccccatccaaacaca 9894388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 422
Target Start/End: Original strand, 33245368 - 33245441
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactc 422  Q
    |||||| || |||||| ||||||| ||||||||||||||||||  |||| | ||||||||||||||||||||||    
T  33245368 aattcaacttaaagtagttgaattttctcaaaacattacattccatcaaaacattcccccatccaaacacactc 33245441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 366 - 426
Target Start/End: Complemental strand, 6634072 - 6634012
Alignment:
Q  366 ttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||||| ||||||||||||||||  ||||| |||| |||||||||||||||||||||||    
T  6634072 ttgaattccctcaaaacattacattacctcaaaatatccccccatccaaacacactcttag 6634012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 23092047 - 23092123
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||| || |||||| ||||| || |||||||||||||||||  |||| | |||||||||||||||||||||||||    
T  23092047 aattcatctgaaagtagttgaactccctcaaaacattacattcgttcaaaacattcccccatccaaacacactctta 23092123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 353 - 421
Target Start/End: Original strand, 28828436 - 28828504
Alignment:
Q  353 cacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    ||||||||| || |||||||| ||||||||||||||||  ||||| ||||| |||||||||||||||||    
T  28828436 cacctcaaaataattgaattccctcaaaacattacattacctcaaaatatttccccatccaaacacact 28828504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 32250094 - 32250169
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||| ||||| |||||||||||| ||||||||||||| ||| ||||| | ||| |||||||||||||||||||||    
T  32250094 aattcatctcaaggtatttgaattccctcaaaacattactttccctcaaaacatt-ccccatccaaacacactctta 32250169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 346
Target Start/End: Complemental strand, 1208074 - 1207991
Alignment:
Q  263 cctacaaatttttgcatactatgatactacttatttctgtaaactaagcatatgaaaattcaacaacatgaggattgaaattat 346  Q
    |||||||||| | ||||||||| |||| ||||  ||||||||||||  |||||||||| |||||||||| |||| |||||||||    
T  1208074 cctacaaattctagcatactataataccacttgcttctgtaaactactcatatgaaaactcaacaacatcaggaatgaaattat 1207991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 32470967 - 32471039
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||| ||||||||| |||||||| ||||||||||||||||| ||||||  ||| || ||||||||||||||||    
T  32470967 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaag--atttccacatccaaacacactct 32471039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 421
Target Start/End: Complemental strand, 14834899 - 14834826
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    ||||||||||||||||||||| |||| || |||||||||||||| ||| | | |||| ||||| ||||||||||    
T  14834899 aaattcacctcaaagtatttggattcccttaaaacattacattccctcgaaacattctcccatgcaaacacact 14834826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 421
Target Start/End: Complemental strand, 28828422 - 28828369
Alignment:
Q  368 gaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    |||||| ||||||||||||||||| ||||| | |||||||||||||||||||||    
T  28828422 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 28828369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 426
Target Start/End: Complemental strand, 34982288 - 34982213
Alignment:
Q  350 attcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||||| |||||  |||||||| |||||||||| |||||| ||||| | ||||||| ||||||||||||||||||    
T  34982288 attcaccttaaagtggttgaattccctcaaaacat-acattccctcaaaacattcccctatccaaacacactcttag 34982213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 13243515 - 13243561
Alignment:
Q  375 ctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    ||||||||||||||||  ||||| |||||||||||||||||||||||    
T  13243515 ctcaaaacattacattacctcaaaatattcccccatccaaacacact 13243561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 423
Target Start/End: Complemental strand, 23092036 - 23091963
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||| || |||||| ||||||||  |||||||||||||||| ||||| ||||| ||||||| |||||||||||    
T  23092036 aattcaacttaaagtagttgaattccttcaaaacattacattccctcaaaatatt-ccccatcaaaacacactct 23091963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 391
Target Start/End: Original strand, 37241598 - 37241640
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattc 391  Q
    |||||| |||||||||||||||||| |||||||||||||||||    
T  37241598 aattcagctcaaagtatttgaattccctcaaaacattacattc 37241640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 421
Target Start/End: Complemental strand, 32390055 - 32389974
Alignment:
Q  340 aaattataaaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    |||| ||| ||||||||| | |||| |||||||| ||||||| |||||||||  |||| | |||||| ||||||||||||||    
T  32390055 aaataatagaattcaccttagagtagttgaattccctcaaaatattacattccttcaaaacattccctcatccaaacacact 32389974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 385
Target Start/End: Original strand, 15270850 - 15270886
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    ||||||||||||||||||||||||| |||||||||||    
T  15270850 aattcacctcaaagtatttgaattccctcaaaacatt 15270886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 421
Target Start/End: Original strand, 15804399 - 15804451
Alignment:
Q  369 aattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    ||||| ||||||||||||||||| ||||| | ||| |||||||||||||||||    
T  15804399 aattccctcaaaacattacattccctcaaaacatttccccatccaaacacact 15804451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 385
Target Start/End: Original strand, 17542357 - 17542393
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    ||||||||||||||||||||||||| |||||||||||    
T  17542357 aattcacctcaaagtatttgaattccctcaaaacatt 17542393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 381
Target Start/End: Complemental strand, 28489537 - 28489505
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaa 381  Q
    |||||||||||||||||||||||||||||||||    
T  28489537 aattcacctcaaagtatttgaattctctcaaaa 28489505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 385
Target Start/End: Complemental strand, 33146247 - 33146211
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    ||||||||||||||||||||||||| |||||||||||    
T  33146247 aattcacctcaaagtatttgaattccctcaaaacatt 33146211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 420
Target Start/End: Original strand, 6634099 - 6634170
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacac 420  Q
    |||||||||||||||| ||||| ||  | |||| ||||||||| ||| | || |||||||||||||||||||    
T  6634099 aattcacctcaaagtagttgaactcctttaaaatattacattccctcgaaatgttcccccatccaaacacac 6634170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 384
Target Start/End: Complemental strand, 28490066 - 28490031
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacat 384  Q
    ||||||||||||||||||||||||| ||||||||||    
T  28490066 aattcacctcaaagtatttgaattccctcaaaacat 28490031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 386
Target Start/End: Complemental strand, 11601122 - 11601076
Alignment:
Q  340 aaattataaaattcacctcaaagtatttgaattctctcaaaacatta 386  Q
    |||| ||||||||||||||||| |||||||||||  |||||||||||    
T  11601122 aaataataaaattcacctcaaattatttgaattccttcaaaacatta 11601076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 390
Target Start/End: Complemental strand, 12479982 - 12479940
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacatt 390  Q
    |||||||||||||||||||||||||  |||||||| |||||||    
T  12479982 aaattcacctcaaagtatttgaatttcctcaaaactttacatt 12479940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 419
Target Start/End: Complemental strand, 16515078 - 16515009
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacaca 419  Q
    |||||||||||||| | |||||||| |||||||| |||||||| ||||| | ||| | |||||||||||||    
T  16515078 aattcacctcaaagaagttgaattccctcaaaaccttacattccctcaaaacatt-ctccatccaaacaca 16515009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 391
Target Start/End: Complemental strand, 30519082 - 30519036
Alignment:
Q  345 ataaaattcacctcaaagtatttgaattctctcaaaacattacattc 391  Q
    |||||||||||| |||| ||||||||||| |||| ||||||||||||    
T  30519082 ataaaattcaccgcaaaatatttgaattccctcataacattacattc 30519036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 391
Target Start/End: Complemental strand, 30559422 - 30559376
Alignment:
Q  345 ataaaattcacctcaaagtatttgaattctctcaaaacattacattc 391  Q
    |||||||||||| |||| ||||||||||| |||| ||||||||||||    
T  30559422 ataaaattcaccgcaaaatatttgaattccctcataacattacattc 30559376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 426
Target Start/End: Complemental strand, 32470965 - 32470879
Alignment:
Q  340 aaattataaaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||| ||| |||| |||| ||| || ||||||||  |||||||||||||||| ||||| | ||| | ||||||||| ||||||||||    
T  32470965 aaataatagaatttaccttaaaatagttgaattccttcaaaacattacattccctcaaaacatttctccatccaaatacactcttag 32470879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 385
Target Start/End: Complemental strand, 2550385 - 2550348
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  2550385 aaattcacctcaaagtagttgaattccctcaaaacatt 2550348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 385
Target Start/End: Original strand, 12064463 - 12064500
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  12064463 aaattcacctcaaagtatttaaattccctcaaaacatt 12064500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 426
Target Start/End: Complemental strand, 13243514 - 13243454
Alignment:
Q  368 gaattctctcaaaacattacattctctcaagatattcccccatc--caaacacactcttag 426  Q
    |||||| ||||||||||||||||| ||||| | |||||| ||||  |||||||||||||||    
T  13243514 gaattccctcaaaacattacattccctcaaaacattccctcatccacaaacacactcttag 13243454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 425
Target Start/End: Complemental strand, 28489516 - 28489479
Alignment:
Q  388 attctctcaagatattcccccatccaaacacactctta 425  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  28489516 attctctcaaaatattcccccatccaaacacaatctta 28489479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 385
Target Start/End: Complemental strand, 34105146 - 34105109
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  34105146 aaattcatctcaaagtatttgaattttctcaaaacatt 34105109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 426
Target Start/End: Complemental strand, 5658821 - 5658773
Alignment:
Q  378 aaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||||||||||| ||||| | ||| | ||||||||||||||||||||    
T  5658821 aaaacattacattccctcaaaacatttctccatccaaacacactcttag 5658773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 385
Target Start/End: Complemental strand, 22305168 - 22305132
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    |||||||||||||||| |||||||| |||||||||||    
T  22305168 aattcacctcaaagtagttgaattccctcaaaacatt 22305132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 3e-27; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 348 - 426
Target Start/End: Complemental strand, 33986079 - 33986001
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||||||||||||||||||||||||||||||||||||||||   |||||| ||||||||||||||||||||||||||    
T  33986079 aaattcacctcaaagtatttgaattctctcaaaacattacattacttcaagacattcccccatccaaacacactcttag 33986001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 423
Target Start/End: Complemental strand, 3853690 - 3853616
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||||||||||| |||||||  ||||||||||||||||| ||||| | |||||||||||||||||||||||    
T  3853690 aattcacctcaaagtagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactct 3853616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 423
Target Start/End: Complemental strand, 3858148 - 3858074
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||||||||||| |||||||  ||||||||||||||||| ||||| | |||||||||||||||||||||||    
T  3858148 aattcacctcaaagtagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactct 3858074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 345 - 423
Target Start/End: Original strand, 14800041 - 14800119
Alignment:
Q  345 ataaaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||||||||  ||||| |||||||| ||||||||||||| ||| ||||| |||||||||||||||||||||||||    
T  14800041 ataaaattcaccttgaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 14800119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 427
Target Start/End: Complemental strand, 17110943 - 17110865
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttagt 427  Q
    |||||| ||||||||| |||||||| ||||||||||||||||| ||||| | ||| |||||||||||||||||||||||    
T  17110943 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactcttagt 17110865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 426
Target Start/End: Original strand, 33377306 - 33377383
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||||| |||||||||||||||| ||||||||| || |||| ||||| | ||||||||||||||||||||||||||    
T  33377306 aattcaccccaaagtatttgaattccctcaaaacaatatattccctcaaaacattcccccatccaaacacactcttag 33377383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 23011808 - 23011732
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    ||||||||||||||||||||||||| |||| |||||||||||| ||||| | |||| ||| ||||||||||||||||    
T  23011808 aattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattctcccgtccaaacacactctta 23011732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 42711365 - 42711441
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||| ||||||||| |||||||| ||||||||||||||||| ||||| | ||||||| |||||||||||||||||    
T  42711365 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacattccccaatccaaacacactctta 42711441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 423
Target Start/End: Complemental strand, 24045034 - 24044960
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||||||| ||||||||||||  |||||||||||||||| ||||| | |||||| ||||||||||||||||    
T  24045034 aattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattccctcatccaaacacactct 24044960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 29257360 - 29257434
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||| |||||||||||||||| || |||||| ||||||| ||||| | |||||||||||||||||||||||    
T  29257360 aattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 29257434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 423
Target Start/End: Complemental strand, 44889428 - 44889354
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||| ||||||||||||||||| |||||||||||| |||| ||||| | ||||| |||||||||||||||||    
T  44889428 aattcacatcaaagtatttgaattccctcaaaacattatattccctcaaaacattcctccatccaaacacactct 44889354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 349 - 426
Target Start/End: Complemental strand, 36103175 - 36103098
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    ||||||| ||||||||||||||||  || |||||||||||||| ||||| | ||||| ||||||||||||||||||||    
T  36103175 aattcacatcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacacactcttag 36103098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 421
Target Start/End: Original strand, 4156252 - 4156324
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    |||||| || |||||| |||||||| ||||||||||||||||| ||||| |||||| ||||||||||||||||    
T  4156252 aattcatcttaaagtagttgaattccctcaaaacattacattccctcaaaatattctcccatccaaacacact 4156324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 421
Target Start/End: Original strand, 29482816 - 29482888
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    |||||||| |||||||||||||||| ||||||||| ||| ||| ||||| | |||||||||||||||||||||    
T  29482816 aattcaccccaaagtatttgaattccctcaaaacaatacgttccctcaaaacattcccccatccaaacacact 29482888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 426
Target Start/End: Complemental strand, 40046877 - 40046801
Alignment:
Q  350 attcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    ||||| ||||||||| |||||||| ||||||||||||||||| ||||| | ||||  ||||||||||||||||||||    
T  40046877 attcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacattcatccatccaaacacactcttag 40046801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 426
Target Start/End: Complemental strand, 14313 - 14236
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    ||||||||| |||||||||||||||| || |||||||||||||| ||| | | ||| ||||||||||||||||||||||    
T  14313 aaattcaccccaaagtatttgaattcccttaaaacattacattccctccaaacatt-ccccatccaaacacactcttag 14236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 17110954 - 17111028
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||| |||||| |||||||| ||||||||||||||||| ||||| | ||| | |||||||||||||||||    
T  17110954 aattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttctccatccaaacacactct 17111028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 28324671 - 28324745
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||| ||||| ||||||||||||  |||||||||||||||| ||||| | ||||| |||||||||||||||||    
T  28324671 aattcagctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcctccatccaaacacactct 28324745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 419
Target Start/End: Original strand, 44346687 - 44346757
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacaca 419  Q
    |||||||| |||||||||||||||| || |||||| ||||||| ||||| | |||||||||||||||||||    
T  44346687 aattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacaca 44346757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 423
Target Start/End: Complemental strand, 33902732 - 33902667
Alignment:
Q  358 caaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||| |||||||| ||||||||||||||||| ||||| | ||||| |||||||||||||||||    
T  33902732 caaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 33902667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 353 - 421
Target Start/End: Complemental strand, 13404897 - 13404829
Alignment:
Q  353 cacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    ||||||||| || |||||||| ||||||||||||||||  ||||| ||||| |||||||||||||||||    
T  13404897 cacctcaaaataattgaattccctcaaaacattacattacctcaaaatatttccccatccaaacacact 13404829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 345 - 413
Target Start/End: Original strand, 13404908 - 13404976
Alignment:
Q  345 ataaaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatcca 413  Q
    |||||||||| ||||||||| |||||||| ||||||||||||||||| ||||| | ||||||| |||||    
T  13404908 ataaaattcatctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccctatcca 13404976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 423
Target Start/End: Original strand, 515540 - 515615
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||| |||||||||||||| || || ||||||||||||||  |||| | ||||| |||||||||||||||||    
T  515540 aaattcacatcaaagtatttgaactcccttaaaacattacattccttcaaaacattcctccatccaaacacactct 515615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 420
Target Start/End: Original strand, 35979013 - 35979084
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacac 420  Q
    ||||||||||||||||||||||||| |||  || ||||||||| ||||| | ||||| ||||||||||||||    
T  35979013 aattcacctcaaagtatttgaattccctcttaagattacattccctcaaaacattcctccatccaaacacac 35979084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 426
Target Start/End: Original strand, 33902751 - 33902828
Alignment:
Q  349 aattcacctcaaagta-tttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||||||||||||| ||||||||| |||||||||  |||||| ||||| | |||||||||||| |||||||||||||    
T  33902751 aattcacctcaaagtagtttgaattccctcaaaacaaaacattccctcaa-acattcccccatcccaacacactcttag 33902828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 353 - 423
Target Start/End: Original strand, 37268096 - 37268166
Alignment:
Q  353 cacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||| || || ||||| ||||||||||||||||  ||||| ||||||||| |||||||||||||||    
T  37268096 cacctcaaaataattaaattccctcaaaacattacattacctcaaaatattcccctatccaaacacactct 37268166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 1088286 - 1088362
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||| ||| |||| ||||||||||  ||||||||| ||||||||||||| | ||||| ||| |||||||||||||||    
T  1088286 aatttaccccaaaatatttgaatttcctcaaaacaatacattctctcaaaacattcctccacccaaacacactctta 1088362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 421
Target Start/End: Original strand, 3853705 - 3853773
Alignment:
Q  353 cacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    ||||||||| || |||||||| ||| ||||||||||||  ||||| ||||| |||||||||||||||||    
T  3853705 cacctcaaaataattgaattccctccaaacattacattacctcaaaatatttccccatccaaacacact 3853773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 421
Target Start/End: Original strand, 3858163 - 3858231
Alignment:
Q  353 cacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    ||||||||| || |||||||| ||| ||||||||||||  ||||| ||||| |||||||||||||||||    
T  3858163 cacctcaaaataattgaattccctccaaacattacattacctcaaaatatttccccatccaaacacact 3858231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 408
Target Start/End: Complemental strand, 8049329 - 8049269
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattccccc 408  Q
    ||||| |||||||||||||||||||| |||||||||||| |||| ||||| | ||||||||    
T  8049329 aaatttacctcaaagtatttgaattccctcaaaacattatattccctcaaaacattccccc 8049269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 366 - 425
Target Start/End: Complemental strand, 14991749 - 14991690
Alignment:
Q  366 ttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||||  ||||||||||||||||  ||||| | |||||||||||||||||||||||||    
T  14991749 ttgaattgcctcaaaacattacattacctcaaaacattcccccatccaaacacactctta 14991690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 375 - 426
Target Start/End: Original strand, 32626069 - 32626120
Alignment:
Q  375 ctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    ||||||||||||||||| ||||| | |||||||||||||| |||||||||||    
T  32626069 ctcaaaacattacattccctcaaaagattcccccatccaagcacactcttag 32626120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 349 - 390
Target Start/End: Complemental strand, 9982710 - 9982669
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacatt 390  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  9982710 aattcacctcaaaatatttaaattctctcaaaacattacatt 9982669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 349 - 430
Target Start/End: Original strand, 11744728 - 11744809
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttagtgtt 430  Q
    ||||||||| ||| || ||||||||  ||| |||||||||||| ||| | |||||| | |||||||||||||||||| ||||    
T  11744728 aattcaccttaaactagttgaattccttcacaacattacattccctctaaatattctctcatccaaacacactcttaatgtt 11744809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 349 - 390
Target Start/End: Complemental strand, 13144657 - 13144616
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacatt 390  Q
    ||||||||||||||||||||||||| |||| |||||||||||    
T  13144657 aattcacctcaaagtatttgaattccctcataacattacatt 13144616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 348 - 385
Target Start/End: Complemental strand, 29611445 - 29611408
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    |||||||||||||||||||||||||| |||||||||||    
T  29611445 aaattcacctcaaagtatttgaattccctcaaaacatt 29611408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 385
Target Start/End: Original strand, 26520448 - 26520484
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    ||||||||||||||||||||||||| |||||||||||    
T  26520448 aattcacctcaaagtatttgaattccctcaaaacatt 26520484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 385
Target Start/End: Original strand, 30444942 - 30444978
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    ||||||||||||||||||||||||| |||||||||||    
T  30444942 aattcacctcaaagtatttgaattccctcaaaacatt 30444978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 385
Target Start/End: Complemental strand, 34008855 - 34008819
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    ||||||||||||||||||||||||| |||||||||||    
T  34008855 aattcacctcaaagtatttgaattccctcaaaacatt 34008819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 390
Target Start/End: Original strand, 35404748 - 35404792
Alignment:
Q  346 taaaattcacctcaaagtatttgaattctctcaaaacattacatt 390  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||    
T  35404748 taaaattcacctcaaagtatttgaatttcctcaaaatattacatt 35404792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 425
Target Start/End: Original strand, 27322687 - 27322734
Alignment:
Q  378 aaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||||||||||| ||||| | |||| ||||||||||||||||||||    
T  27322687 aaaacattacattccctcaaaacattctcccatccaaacacactctta 27322734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 385
Target Start/End: Complemental strand, 7202922 - 7202885
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  7202922 aaattcacctcaaagtagttgaattccctcaaaacatt 7202885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 423
Target Start/End: Complemental strand, 31807465 - 31807409
Alignment:
Q  366 ttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||| ||||||||||||||||| ||||| | |||| | ||||||||||||||||    
T  31807465 ttgaattccctcaaaacattacattc-ctcaaaacattctctcatccaaacacactct 31807409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 397
Target Start/End: Original strand, 15186826 - 15186874
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaa 397  Q
    ||||||||| ||| ||||||||||  |||||||||||||||| ||||||    
T  15186826 aattcaccttaaactatttgaatttactcaaaacattacattatctcaa 15186874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 397
Target Start/End: Original strand, 21465318 - 21465366
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaa 397  Q
    |||| |||| ||||||||||||||| |||| |||| |||||||||||||    
T  21465318 aatttaccttaaagtatttgaattccctcataacactacattctctcaa 21465366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 424
Target Start/End: Original strand, 31976590 - 31976665
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctt 424  Q
    ||||||| |||||| ||||||||||  |||||| |||||||||   |||| |||| |||||||||||| ||||||||    
T  31976590 aaattcatctcaaaatatttgaatttcctcaaagcattacattacttcaaaatat-cccccatccaaaaacactctt 31976665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 42740009 - 42739969
Alignment:
Q  345 ataaaattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    |||||||||| ||||||||| |||||||| |||||||||||    
T  42740009 ataaaattcatctcaaagtagttgaattccctcaaaacatt 42739969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 5e-26; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 27033564 - 27033488
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  27033564 aattcacctcaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacacactctta 27033488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 349 - 421
Target Start/End: Original strand, 11532252 - 11532324
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||| | |||||||||||||||||||||||    
T  11532252 aattcacctcaaagtatttgaattccctcaaaacattacattccctccaaatattcccccatccaaacacact 11532324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 349 - 421
Target Start/End: Complemental strand, 11793969 - 11793897
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    ||||||||||||||||||||||||| |||| |||||||||||| ||||| |||||||||||||||||||||||    
T  11793969 aattcacctcaaagtatttgaattccctcataacattacattccctcaaaatattcccccatccaaacacact 11793897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 14365774 - 14365698
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||||||    
T  14365774 aattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 14365698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 349 - 427
Target Start/End: Complemental strand, 10480193 - 10480115
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttagt 427  Q
    ||||||||||||||||||||||||| |||  |||||||||||| ||||| | |||||||||||||||||||||||||||    
T  10480193 aattcacctcaaagtatttgaattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttagt 10480115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 349 - 424
Target Start/End: Complemental strand, 14537273 - 14537198
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctt 424  Q
    |||||||||||||||| |||||||  ||||||||||||||||| ||||| | ||||||||||||||||||||||||    
T  14537273 aattcacctcaaagtagttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacacactctt 14537198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 784878 - 784952
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||| |||||| |||||||| |||||||||||||||||  |||| |||||||||||||||||||||||||    
T  784878 aattcaccttaaagtagttgaattccctcaaaacattacattccatcaaaatattcccccatccaaacacactct 784952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 41461600 - 41461674
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||||||| || |||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||||    
T  41461600 aattcacctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 41461674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 426
Target Start/End: Original strand, 33189256 - 33189333
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||||| |||||||||||||||| || |||||| ||||||| ||||| | ||||||||||||||||||||||||||    
T  33189256 aattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactcttag 33189333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 769110 - 769034
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||||| |||||||||||||||| || |||||| ||||||| ||||| | |||||||||||||||||||||||||    
T  769110 aattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactctta 769034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 11141379 - 11141303
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||||| |||||||||||||||| || |||||| ||||||| ||||| | |||||||||||||||||||||||||    
T  11141379 aattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactctta 11141303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 1583808 - 1583882
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||| |||||||||||||||| || |||||| ||||||| ||||| | |||||||||||||||||||||||    
T  1583808 aattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 1583882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 423
Target Start/End: Complemental strand, 11716482 - 11716408
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||| | ||||  |||||||||||||||||    
T  11716482 aattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcttccatccaaacacactct 11716408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 427
Target Start/End: Complemental strand, 17905728 - 17905650
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttagt 427  Q
    ||||||||||||| |||||||||||  | |||||||||||||||||||| | |||||| ||||| ||||||||||||||    
T  17905728 aattcacctcaaaatatttgaattcctttaaaacattacattctctcaaaacattccctcatcctaacacactcttagt 17905650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 348 - 425
Target Start/End: Original strand, 7228010 - 7228087
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    ||||| ||||||| |||||| |||||  |||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  7228010 aaatttacctcaaggtatttaaattccttcaaaacattacattctctcaaaacatttccccatccaaacacactctta 7228087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 17180371 - 17180295
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||| |||||| || |||||||| ||||||||||||||||| ||||| | |||||| ||||||||||||||||||    
T  17180371 aattcatctcaaaatagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactctta 17180295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 348 - 415
Target Start/End: Complemental strand, 30698356 - 30698289
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaa 415  Q
    ||||||||||||| ||||||||||||  |||||||||||||||| ||||| | |||||||||||||||    
T  30698356 aaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaa 30698289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 345 - 423
Target Start/End: Complemental strand, 10244255 - 10244177
Alignment:
Q  345 ataaaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||||||||  ||||| |||||||| ||||||||||||| ||| ||||  |||||| ||||||||||||||||||    
T  10244255 ataaaattcaccttgaagtagttgaattccctcaaaacattactttccctcagaatattctcccatccaaacacactct 10244177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 423
Target Start/End: Complemental strand, 13017853 - 13017779
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||||||||||||||||||| || |||| ||||||||| ||||| | ||| || ||||||||||||||||    
T  13017853 aattcacctcaaagtatttgaattcccttaaaatattacattccctcaaaacatttccacatccaaacacactct 13017779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 35047678 - 35047752
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||| |||||||||||||||| || |||||| ||||||  ||||| | |||||||||||||||||||||||    
T  35047678 aattcaccccaaagtatttgaattcccttaaaacaatacatttcctcaaaacattcccccatccaaacacactct 35047752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 11684656 - 11684595
Alignment:
Q  366 ttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttagt 427  Q
    |||||||| ||||||||||||||||| ||||| | ||||||||||||||||||| |||||||    
T  11684656 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacattcttagt 11684595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 423
Target Start/End: Original strand, 14365793 - 14365858
Alignment:
Q  358 caaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||| |||||||| ||||||||||||||||| ||||| | ||||| |||||||||||||||||    
T  14365793 caaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 14365858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 349 - 421
Target Start/End: Original strand, 44256192 - 44256263
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    ||||||||||||| || | |||||| ||||||||||||||||  ||||| |||||||||||||||||||||||    
T  44256192 aattcacctcaaaataatcgaattccctcaaaacattacattacctcaa-atattcccccatccaaacacact 44256263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 357 - 420
Target Start/End: Complemental strand, 28740662 - 28740599
Alignment:
Q  357 tcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacac 420  Q
    ||||||||||||||||| ||||||||||||||||| ||||| | ||| |||||| |||||||||    
T  28740662 tcaaagtatttgaattccctcaaaacattacattccctcaaaacatttccccattcaaacacac 28740599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 398
Target Start/End: Original strand, 7167665 - 7167715
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaag 398  Q
    ||||||||||||||||||||||||||  |||||||||||||||| ||||||    
T  7167665 aaattcacctcaaagtatttgaattccttcaaaacattacattccctcaag 7167715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 426
Target Start/End: Complemental strand, 3092356 - 3092279
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||| ||| |||||||||||||||  ||||||||| ||||||| ||||| | ||||| ||||||||| ||||||||||    
T  3092356 aatttaccccaaagtatttgaatttcctcaaaacaatacattccctcaaaacattcctccatccaaatacactcttag 3092279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 353 - 426
Target Start/End: Complemental strand, 41461585 - 41461512
Alignment:
Q  353 cacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    ||||||||| || || ||||| ||||||||||||||||  ||||| ||||| ||||||||||||||||| ||||    
T  41461585 cacctcaaaataattaaattccctcaaaacattacattacctcaaaatatttccccatccaaacacactattag 41461512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 397
Target Start/End: Complemental strand, 11794050 - 11794002
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaa 397  Q
    |||| ||||||||||||||||||||||||| ||||||||||| ||||||    
T  11794050 aatttacctcaaagtatttgaattctctcataacattacattttctcaa 11794002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 40026138 - 40026070
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaaca 417  Q
    ||||||||||||||||||| ||||  |||||||||||| |||  ||||| |||||||||||| ||||||    
T  40026138 aattcacctcaaagtatttaaatttcctcaaaacattatattacctcaaaatattcccccattcaaaca 40026070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 396
Target Start/End: Original strand, 32839647 - 32839694
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctca 396  Q
    ||||||| ||||||||||||||||| ||||||||||||||||| ||||    
T  32839647 aattcacgtcaaagtatttgaattccctcaaaacattacattccctca 32839694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 427
Target Start/End: Complemental strand, 784867 - 784789
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttagt 427  Q
    |||||| ||||||||| || |||||  |||||||||||||||| ||||| | |||   |||||||||||||||||||||    
T  784867 aattcaactcaaagtagttaaattccttcaaaacattacattccctcaaaacatttttccatccaaacacactcttagt 784789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 387
Target Start/End: Complemental strand, 11607295 - 11607257
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattac 387  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  11607295 aattcacctcaaagtatttgaattccctcaaaacattac 11607257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 11716501 - 11716563
Alignment:
Q  366 ttgaattctctcaaaacattacattctctcaagatattcccccatcc-aaacacactcttagt 427  Q
    |||||||| ||||||||||||||||| ||||| | |||||||||||| ||||||| |||||||    
T  11716501 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaacacattcttagt 11716563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 425
Target Start/End: Complemental strand, 14954330 - 14954264
Alignment:
Q  359 aaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||| ||||||||||| |||| ||||||||| ||||| | ||||| | |||||||||||||||||    
T  14954330 aaagtagttgaattctcttaaaagattacattcactcaaaacattcctctatccaaacacactctta 14954264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 418
Target Start/End: Complemental strand, 740782 - 740709
Alignment:
Q  345 ataaaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacac 418  Q
    |||||||||||||||||  || ||||||||| |||||||||||||| |||||| | |||   ||||||||||||    
T  740782 ataaaattcacctcaaatgatatgaattctcacaaaacattacattatctcaaaacatttatccatccaaacac 740709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 385
Target Start/End: Original strand, 8736440 - 8736476
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    ||||||||||||||||||||||||| |||||||||||    
T  8736440 aattcacctcaaagtatttgaattccctcaaaacatt 8736476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 39630298 - 39630223
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    ||||| ||||||| ||||||||||| ||||||||| ||||||| ||||| | ||| | |||| ||||||||||||||    
T  39630298 aattcccctcaaa-tatttgaattccctcaaaacaatacattccctcaaaacatttctccattcaaacacactctta 39630223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 422
Target Start/End: Original strand, 30751359 - 30751418
Alignment:
Q  363 tatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactc 422  Q
    ||||| ||||| |||||||||||||||| |||||| | |||| | |||||||||||||||    
T  30751359 tatttaaattcactcaaaacattacattatctcaaaacattctctcatccaaacacactc 30751418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 423
Target Start/End: Complemental strand, 8735914 - 8735844
Alignment:
Q  353 cacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||||||||||||||| |||  ||||||| |||| ||||| | ||   ||||||||||||||||||    
T  8735914 cacctcaaagtatttgaattccctcgtaacattatattccctcaaaacatgttcccatccaaacacactct 8735844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 387
Target Start/End: Complemental strand, 11595393 - 11595355
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattac 387  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  11595393 aattcacctcaaaatatttgaattccctcaaaacattac 11595355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 383
Target Start/End: Complemental strand, 44255708 - 44255674
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaaca 383  Q
    |||||||| ||||||||||||||||||||||||||    
T  44255708 aattcaccccaaagtatttgaattctctcaaaaca 44255674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 45094470 - 45094544
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||| | |||||| || ||||| |||||||||||| |||| ||||| | |||||| ||| ||||||||||||    
T  45094470 aattcactttaaagtagttaaattccctcaaaacattatattccctcaaaacattccctcattcaaacacactct 45094544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 390
Target Start/End: Complemental strand, 10480274 - 10480233
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacatt 390  Q
    |||| ||||||||||||||||||||||||| | |||||||||    
T  10480274 aatttacctcaaagtatttgaattctctcatagcattacatt 10480233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 390
Target Start/End: Original strand, 11532169 - 11532210
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacatt 390  Q
    |||| |||||||||||||||||||| |||| |||||||||||    
T  11532169 aatttacctcaaagtatttgaattccctcataacattacatt 11532210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 390
Target Start/End: Original strand, 14954352 - 14954393
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacatt 390  Q
    ||||||||| |||||| |||||||| ||||||||||||||||    
T  14954352 aattcaccttaaagtagttgaattccctcaaaacattacatt 14954393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 385
Target Start/End: Original strand, 32840190 - 32840227
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  32840190 aaattcacctcaaagtatttaaattccctcaaaacatt 32840227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 385
Target Start/End: Original strand, 11684675 - 11684711
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    |||||||||||||||| |||||||| |||||||||||    
T  11684675 aattcacctcaaagtagttgaattccctcaaaacatt 11684711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 385
Target Start/End: Complemental strand, 20935780 - 20935744
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  20935780 aattcacatcaaagtatttgaattccctcaaaacatt 20935744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 41585685 - 41585725
Alignment:
Q  345 ataaaattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    ||||| ||||| ||||||||||||||||| |||||||||||    
T  41585685 ataaatttcacttcaaagtatttgaattccctcaaaacatt 41585725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 8e-25; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 345 - 423
Target Start/End: Complemental strand, 31473927 - 31473849
Alignment:
Q  345 ataaaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||| ||||| | |||||||||||||||||||||||    
T  31473927 ataaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 31473849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 349 - 430
Target Start/End: Complemental strand, 2125931 - 2125850
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttagtgtt 430  Q
    |||||||| |||||||||||||||| ||||||||| ||||||| ||||| ||||||||||||||||||||||||| ||||||    
T  2125931 aattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaatattcccccatccaaacacactctaagtgtt 2125850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 350 - 433
Target Start/End: Complemental strand, 11041040 - 11040958
Alignment:
Q  350 attcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttagtgttgag 433  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||| || ||||||    
T  11041040 attcacctcaaagtagttgaattctctcaaaacattacattccctcaaaatatt-ccccatccaaacacactctaagagttgag 11040958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 349 - 426
Target Start/End: Original strand, 4896717 - 4896794
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||    
T  4896717 aattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactattag 4896794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 348 - 420
Target Start/End: Complemental strand, 10633107 - 10633035
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacac 420  Q
    |||||||||||||||||||||||||| |||| |||||||||||| ||||| | ||||||||||||||||||||    
T  10633107 aaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacac 10633035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 348 - 426
Target Start/End: Complemental strand, 1112680 - 1112602
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||  ||||| | ||||||||||||||||||||||||||    
T  1112680 aaattcacctcaaagtagttgaattccctcgaaacattacatttcctcaaaacattcccccatccaaacacactcttag 1112602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 10128059 - 10128133
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||| ||||||||| |||||||| ||||||||||||||||||||||| | ||||||||||||||| |||||||    
T  10128059 aattcatctcaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaatacactct 10128133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 49111397 - 49111471
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||||||| || |||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||||    
T  49111397 aattcacctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 49111471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 425
Target Start/End: Original strand, 41498574 - 41498651
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||||||||||| || ||||||||  |||||||||||||||| ||||| ||||||| |||||||||||||||||||    
T  41498574 aaattcacctcaaaataattgaattccttcaaaacattacattccctcaaaatattcctccatccaaacacactctta 41498651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 348 - 415
Target Start/End: Complemental strand, 1539716 - 1539649
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaa 415  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||| | ||||| |||||||||    
T  1539716 aaattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaa 1539649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 857324 - 857398
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||| ||||||||| |||||||| ||||||||||||||||| ||||| | ||| |||||||||||||||||||    
T  857324 aattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactct 857398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 345 - 423
Target Start/End: Complemental strand, 14982358 - 14982280
Alignment:
Q  345 ataaaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||||||| |||||| || ||||| ||||||||||||||||| ||||| | ||||| |||||||||||||||||    
T  14982358 ataaaattcaccttaaagtagttaaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 14982280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 15660268 - 15660342
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||| ||||||||| |||||||| ||||||||||||||||| ||||| | |||||| ||||||||||||||||    
T  15660268 aattcagctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 15660342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 423
Target Start/End: Complemental strand, 36455981 - 36455907
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||| |||||| |||||||| |||||||||||| |||| ||||| | |||||||||||||||||||||||    
T  36455981 aattcaccttaaagtagttgaattccctcaaaacattagattccctcaaaacattcccccatccaaacacactct 36455907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 357 - 426
Target Start/End: Original strand, 7352905 - 7352974
Alignment:
Q  357 tcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||||| |||||||| ||||||||||||||||| ||||| | ||| ||||||||||||||||||||||    
T  7352905 tcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactcttag 7352974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 355 - 423
Target Start/End: Complemental strand, 4896716 - 4896648
Alignment:
Q  355 cctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||| || |||||||| ||||||||||||||||  ||||| |||||||||||||||||||||||||    
T  4896716 cctcaaaataattgaattccctcaaaacattacattacctcaaaatattcccccatccaaacacactct 4896648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 5715815 - 5715744
Alignment:
Q  352 tcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||| ||||||||||||||||  |||||||||||||||| |||||| | |||||| ||||||||||||||||    
T  5715815 tcacatcaaagtatttgaattacctcaaaacattacattatctcaaaacattccctcatccaaacacactct 5715744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 1107137 - 1107211
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||| | |||| |||||||| |||||||||||| |||| ||||| ||||||||||||||||| |||||||    
T  1107137 aattcaccttagagtagttgaattccctcaaaacattatattccctcaaaatattcccccatccaaatacactct 1107211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 426
Target Start/End: Complemental strand, 15660250 - 15660180
Alignment:
Q  356 ctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||| || |||||||| ||||||||||||||||  ||||| ||||||||| ||||||||||||||||||    
T  15660250 ctcaaaataattgaattccctcaaaacattacattacctcaaaatattcccctatccaaacacactcttag 15660180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 28845956 - 28846030
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||| ||||||||| |||||||| |||||||||||| |||| ||||| | ||| |||||||||||||||||||    
T  28845956 aattcaactcaaagtagttgaattccctcaaaacattatattccctcaaaacatttccccatccaaacacactct 28846030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 344 - 426
Target Start/End: Original strand, 36456006 - 36456088
Alignment:
Q  344 tataaaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||| ||||||||| |||||| |||||||  ||||||| ||||||||| ||||| | ||||| ||||||||||||||||||||    
T  36456006 tatagaattcaccttaaagtagttgaatttcctcaaaatattacattccctcaaaacattcctccatccaaacacactcttag 36456088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 349 - 421
Target Start/End: Complemental strand, 7352886 - 7352814
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    ||||||||| ||| || ||||||||  |||||||||||||||| ||||| | |||||||||||||||||||||    
T  7352886 aattcaccttaaaatagttgaattccatcaaaacattacattccctcaaaacattcccccatccaaacacact 7352814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 351 - 423
Target Start/End: Complemental strand, 16516243 - 16516171
Alignment:
Q  351 ttcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||| ||||||||||| |||||  ||||||||||||||||  |||| | |||||||||||||||||||||||    
T  16516243 ttcacatcaaagtatttaaattccttcaaaacattacattccgtcaaaacattcccccatccaaacacactct 16516171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 42844617 - 42844541
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||||||||||||| ||||||||  |||||| ||||||||| ||||| | ||||||||||| | |||||||||||    
T  42844617 aattcacctcaaagtagttgaattccttcaaaatattacattccctcaaaacattcccccatctatacacactctta 42844541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 1112707 - 1112781
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||||||||||| |||||||| ||| ||||||||||||  ||||| | || |||||||||||||| |||||    
T  1112707 aattcacctcaaagtagttgaattccctcgaaacattacatttgctcaaaacatccccccatccaaacaaactct 1112781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 391
Target Start/End: Original strand, 16300218 - 16300260
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattc 391  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  16300218 aattcacctcaaagtatttgaattttctcaaaacattacattc 16300260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 423
Target Start/End: Complemental strand, 35470196 - 35470122
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||| |||||||||||||||| ||||||||| ||||||| ||||| | ||| | ||||| |||||||||||    
T  35470196 aattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttcaccatctaaacacactct 35470122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 423
Target Start/End: Original strand, 11348327 - 11348396
Alignment:
Q  354 acctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||||  |||||||| ||||||||||||||||| || || | ||||||||||||||| |||||||    
T  11348327 acctcaaagttgttgaattccctcaaaacattacattcccttaaaacattcccccatccaaatacactct 11348396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 353 - 426
Target Start/End: Complemental strand, 26250979 - 26250906
Alignment:
Q  353 cacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    ||||||||| || |||||||  ||||||||||||||||  ||||| |||||||| |||||||||||||| ||||    
T  26250979 cacctcaaaataattgaatttcctcaaaacattacattacctcaaaatattccctcatccaaacacactattag 26250906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 418
Target Start/End: Complemental strand, 28845945 - 28845876
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacac 418  Q
    ||||||||| |||||| |||||||| ||| ||||||||||||| ||||| | ||||| ||||||||||||    
T  28845945 aattcaccttaaagtagttgaattccctcgaaacattacattccctcaaaacattcctccatccaaacac 28845876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 422
Target Start/End: Complemental strand, 4441394 - 4441338
Alignment:
Q  366 ttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactc 422  Q
    |||||||| ||||||||||||||||| ||||| | ||||| ||||||||||||||||    
T  4441394 ttgaattccctcaaaacattacattccctcaaaacattccaccatccaaacacactc 4441338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 421
Target Start/End: Complemental strand, 10128044 - 10127976
Alignment:
Q  353 cacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    ||||||||| || ||||||||  |||||||||||||||   |||| |||||||||||||||||||||||    
T  10128044 cacctcaaaataattgaattccttcaaaacattacattacttcaaaatattcccccatccaaacacact 10127976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 396
Target Start/End: Complemental strand, 29091211 - 29091164
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctca 396  Q
    ||||||| ||||||||||||||||| ||||||||||||||||| ||||    
T  29091211 aattcacatcaaagtatttgaattccctcaaaacattacattccctca 29091164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 423
Target Start/End: Original strand, 55266856 - 55266934
Alignment:
Q  345 ataaaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||||||| |||||| |||||||| ||||||| |||| |||  ||||| | ||||  |||||||||||||||||    
T  55266856 ataaaattcaccttaaagtagttgaattccctcaaaatattatatttcctcaaaacattcatccatccaaacacactct 55266934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 348 - 385
Target Start/End: Original strand, 27284660 - 27284697
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  27284660 aaattcacctcaaagtatttgaattctcttaaaacatt 27284697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 375 - 424
Target Start/End: Original strand, 31742875 - 31742924
Alignment:
Q  375 ctcaaaacattacattctctcaagatattcccccatccaaacacactctt 424  Q
    ||||||||||||||||| ||||| | ||||| ||||||||||||||||||    
T  31742875 ctcaaaacattacattccctcaaaacattcctccatccaaacacactctt 31742924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 348 - 425
Target Start/End: Complemental strand, 42776712 - 42776635
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||||||| ||||||||||||||  |||||||||||||||   || || | ||||  |||||||||||||||||||    
T  42776712 aaattcacctaaaagtatttgaatttactcaaaacattacataacctaaaaacattcttccatccaaacacactctta 42776635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 421
Target Start/End: Original strand, 19461743 - 19461807
Alignment:
Q  357 tcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    ||||| ||||||||||| ||||||||||||||||   |||| ||||| ||||||||||| |||||    
T  19461743 tcaaattatttgaattcgctcaaaacattacattacttcaaaatatttccccatccaaaaacact 19461807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 41139547 - 41139473
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    ||||||||| ||||||||||||||  ||||||||||||||||  ||||| |  || |||||||||||||||||||||    
T  41139547 aattcacctaaaagtatttgaatttcctcaaaacattacattacctcaa-agctt-ccccatccaaacacactctta 41139473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 385
Target Start/End: Complemental strand, 42775679 - 42775643
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    ||||||||||||||||||||||||| |||||||||||    
T  42775679 aattcacctcaaagtatttgaattccctcaaaacatt 42775643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 421
Target Start/End: Original strand, 42844636 - 42844700
Alignment:
Q  357 tcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    ||||| || |||| ||| ||||||||||||||||  ||||| ||||| |||||||||||||||||    
T  42844636 tcaaaataattgatttccctcaaaacattacattacctcaaaatatttccccatccaaacacact 42844700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 396
Target Start/End: Complemental strand, 857313 - 857266
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctca 396  Q
    ||||||||| |||||| |||||||| ||||||||||||||||| ||||    
T  857313 aattcaccttaaagtagttgaattccctcaaaacattacattccctca 857266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 385
Target Start/End: Original strand, 26250979 - 26251030
Alignment:
Q  334 ggattgaaattataaaattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    ||||| |||| ||| |||||||||||||||| |||||||| |||||||||||    
T  26250979 ggattcaaataatagaattcacctcaaagtagttgaattccctcaaaacatt 26251030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 31742845 - 31742778
Alignment:
Q  354 acctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    |||||||| || |||||||| |||||||||||||| |  || || ||||||| |||||||||||||||    
T  31742845 acctcaaaataattgaattccctcaaaacattacactaccttaaaatattcctccatccaaacacact 31742778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 423
Target Start/End: Complemental strand, 41498564 - 41498489
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaa-cattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||| |||||  |||||||| ||||||| |||||  ||||||||| | | |||||||||||||||||||||    
T  41498564 aattcaccttaaagtggttgaattccctcaaaaacattattttctctcaaaacaatcccccatccaaacacactct 41498489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 426
Target Start/End: Complemental strand, 1107126 - 1107048
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctc-tcaagatattcccccatccaaacacactcttag 426  Q
    |||||| ||||||||| ||||||||  |||||||||||||||| | | || | ||| || |||||||||||||||||||    
T  1107126 aattcatctcaaagtagttgaattccttcaaaacattacattcccttaaaaaaatttcctcatccaaacacactcttag 1107048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 391
Target Start/End: Complemental strand, 26534567 - 26534525
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattc 391  Q
    |||||||  |||||||||||||||| |||||||||||||||||    
T  26534567 aattcacaacaaagtatttgaattccctcaaaacattacattc 26534525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 9451127 - 9451172
Alignment:
Q  345 ataaaattcacctcaaagtatttgaattctctcaaaacattacatt 390  Q
    |||||||| | || |||||||||||| |||||||||||||||||||    
T  9451127 ataaaatttagctaaaagtatttgaactctctcaaaacattacatt 9451172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 385
Target Start/End: Complemental strand, 17727140 - 17727103
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    |||||||||||||||||||||||||| | |||||||||    
T  17727140 aaattcacctcaaagtatttgaattcccacaaaacatt 17727103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 385
Target Start/End: Original strand, 40338250 - 40338287
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  40338250 aaattcacctcaaagtatttgaattccatcaaaacatt 40338287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Original strand, 42542979 - 42543024
Alignment:
Q  376 tcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    |||||||||||||||| ||||| | ||||| |||||||||||||||    
T  42542979 tcaaaacattacattccctcaaaacattccaccatccaaacacact 42543024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 385
Target Start/End: Complemental strand, 56339208 - 56339171
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  56339208 aaattcacatcaaagtatttgaattccctcaaaacatt 56339171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 3e-24; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 349 - 426
Target Start/End: Complemental strand, 31632796 - 31632719
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    ||||||||||||||||||||||||| |||| |||||||||||| ||||| | ||||||||||||||||||||||||||    
T  31632796 aattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactcttag 31632719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 352 - 426
Target Start/End: Complemental strand, 2057466 - 2057392
Alignment:
Q  352 tcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||||| | ||||||||||||||||||||||||||    
T  2057466 tcacctcaaagtagttgaattccctcaaaacattacattcgctcaaaacattcccccatccaaacacactcttag 2057392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 26162122 - 26162196
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||||||||||||||||||| |||| |||||||||||| ||||| | |||||||||||||||||||||||    
T  26162122 aattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 26162196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 349 - 426
Target Start/End: Original strand, 35776940 - 35777017
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    ||||||||||||||||||||||||| |||| |||||||||||| ||||| | |||||| |||||||||||||||||||    
T  35776940 aattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattccctcatccaaacacactcttag 35777017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 40110811 - 40110735
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    ||||||||| |||||| |||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||||||    
T  40110811 aattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 40110735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 345 - 423
Target Start/End: Original strand, 2057476 - 2057554
Alignment:
Q  345 ataaaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||||||||  ||||| |||||||| ||||||||||||| ||| ||||| |||||||||||||||||||||||||    
T  2057476 ataaaattcaccttgaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 2057554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 18789231 - 18789305
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||| ||||||||||||||| |||| ||||||| |||||||||| ||||||| |||||||||||||||||    
T  18789231 aattcaccttaaagtatttgaattccctcataacattatattctctcaaaatattcctccatccaaacacactct 18789305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 28539153 - 28539227
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||| |||||||||||||||| ||||||||| ||||||| ||||| | |||||||||||||||||||||||    
T  28539153 aattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacacactct 28539227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 427
Target Start/End: Complemental strand, 43955591 - 43955513
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttagt 427  Q
    |||||| || |||||| |||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||||||||    
T  43955591 aattcatcttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactcttagt 43955513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 426
Target Start/End: Complemental strand, 5644751 - 5644674
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||| | ||||| |||| |||||||||||||||    
T  5644751 aattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacacactcttag 5644674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 6498751 - 6498824
Alignment:
Q  350 attcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||| ||||||||||||||||| ||||||||||||||||| ||||| | ||||| |||||||||||||||||    
T  6498751 attcacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 6498824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 426
Target Start/End: Original strand, 40110823 - 40110900
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||| | | ||| ||||||||||||||||||||||    
T  40110823 aattcacctcaaagtagttgaattccctcaaaacattacattccctcgaaacatttccccatccaaacacactcttag 40110900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 29065893 - 29065817
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||| | ||||  |||||||||||||||||||    
T  29065893 aattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcatccatccaaacacactctta 29065817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 39342627 - 39342703
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||||| |||||||||||||||| || |||||| ||||||| ||||| | |||||||||||||||||||||||||    
T  39342627 aattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactctta 39342703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 349 - 426
Target Start/End: Original strand, 14603247 - 14603324
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||| ||| |||||||||||||||| || |||||| ||||||| ||||| | ||||||||||||||||||||||||||    
T  14603247 aatttaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactcttag 14603324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 348 - 425
Target Start/End: Original strand, 25189210 - 25189287
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||||| ||||||||||||||||| ||||||||||| ||||  ||||| | |||||| ||||||||||||||||||    
T  25189210 aaattcacttcaaagtatttgaattccctcaaaacattgcattacctcaaaacattcccacatccaaacacactctta 25189287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 349 - 426
Target Start/End: Complemental strand, 34388339 - 34388262
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    ||||||||| |||||| ||||||||||||| |||||||| ||  ||||| ||||| ||||||||||||||||||||||    
T  34388339 aattcaccttaaagtagttgaattctctcagaacattacttttcctcaaaatatttccccatccaaacacactcttag 34388262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 353 - 421
Target Start/End: Original strand, 43955603 - 43955671
Alignment:
Q  353 cacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    ||||| |||||| |||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||    
T  43955603 caccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 43955671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 351 - 422
Target Start/End: Original strand, 9784918 - 9784989
Alignment:
Q  351 ttcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactc 422  Q
    |||||| |||||||||||||||| ||||||||| ||||||| ||||| | ||||| ||||||||||||||||    
T  9784918 ttcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcctccatccaaacacactc 9784989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 348 - 419
Target Start/End: Complemental strand, 30629132 - 30629061
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacaca 419  Q
    ||||||||| |||||||||| |||||||| |||||| ||||||| ||||| | |||||||||||||||||||    
T  30629132 aaattcaccccaaagtatttaaattctcttaaaacaatacattccctcaaaacattcccccatccaaacaca 30629061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 419
Target Start/End: Original strand, 23455232 - 23455302
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacaca 419  Q
    |||||||| |||||||||||||||| ||||||||| ||||||| ||||| | |||||| ||||||||||||    
T  23455232 aattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattccctcatccaaacaca 23455302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 23548596 - 23548670
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||| |||||||||||||||  ||||||||| ||||||| ||||| | ||||| |||||||||||||||||    
T  23548596 aattcaccccaaagtatttgaatttcctcaaaacaatacattccctcaaaacattcctccatccaaacacactct 23548670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 354 - 423
Target Start/End: Original strand, 34398938 - 34399008
Alignment:
Q  354 acctcaaagtatttgaattctc-tcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||||| |||||||| | |||||||||||||||| ||||| | |||||||||||||||||||||||    
T  34398938 acctcaaagtagttgaattcacctcaaaacattacattccctcaaaacattcccccatccaaacacactct 34399008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 423
Target Start/End: Complemental strand, 35455878 - 35455804
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||| ||| |||||||||||||||| || |||||| ||||||| ||||| | |||||||||||||||||||||||    
T  35455878 aatttaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 35455804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 427
Target Start/End: Complemental strand, 44915269 - 44915191
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttagt 427  Q
    |||||||||||||||| ||||||||  |||||||||||| ||| ||||| | |||| | ||||||||||||||||||||    
T  44915269 aattcacctcaaagtagttgaattccttcaaaacattacgttccctcaaaaaattctctcatccaaacacactcttagt 44915191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 29639200 - 29639276
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    ||||||||||||| ||||||||||  |||| |||||||||||| || || | ||||||||||||| |||||||||||    
T  29639200 aattcacctcaaaatatttgaatttcctcataacattacattccctgaaaacattcccccatccatacacactctta 29639276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 353 - 423
Target Start/End: Original strand, 5644766 - 5644836
Alignment:
Q  353 cacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||| || |||||||| ||||||||||||||||  ||||| |  ||||||||||||||||||||||    
T  5644766 cacctcaaaataattgaattccctcaaaacattacattacctcaaaacgttcccccatccaaacacactct 5644836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 397
Target Start/End: Complemental strand, 43791162 - 43791116
Alignment:
Q  351 ttcacctcaaagtatttgaattctctcaaaacattacattctctcaa 397  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||    
T  43791162 ttcacctcaaagtatttgaattccctcaaaacattacattccctcaa 43791116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 14790196 - 14790151
Alignment:
Q  340 aaattataaaattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||    
T  14790196 aaataataaaattcacctcaaagtatttgaattccctcaaaacatt 14790151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 397
Target Start/End: Original strand, 22391571 - 22391620
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaa 397  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| |||||    
T  22391571 aaattcacctcaaaatatttaaattctctcaaaacattacattccctcaa 22391620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 364 - 425
Target Start/End: Complemental strand, 29195768 - 29195707
Alignment:
Q  364 atttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||| |||||| |||||||||||||||  ||||| ||||||| |||||||||||||||||||    
T  29195768 atttaaattctttcaaaacattacattacctcaaaatattcctccatccaaacacactctta 29195707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 425
Target Start/End: Complemental strand, 30524330 - 30524253
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    ||||||| | |||||||||||||||| |||||||||||||||||  |||| | ||| | ||||||| |||||||||||    
T  30524330 aaattcatcccaaagtatttgaattccctcaaaacattacattccttcaaaacattactccatccatacacactctta 30524253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 425
Target Start/End: Complemental strand, 21635955 - 21635883
Alignment:
Q  353 cacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    ||||||||| || |||||| | ||||||||||||||||  ||||| |||||| ||||||||| ||||||||||    
T  21635955 cacctcaaaataattgaatcccctcaaaacattacattacctcaaaatattctcccatccaagcacactctta 21635883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 32650651 - 32650611
Alignment:
Q  345 ataaaattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  32650651 ataaaattcacctcaaagtatttgaattccctcaaaacatt 32650611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 49052859 - 49052784
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||| ||||||||| |||||||| ||||||||||||||||| ||||| | |||  | ||||||||||||||||||    
T  49052859 aattcaactcaaagtagttgaattcactcaaaacattacattc-ctcaaaacattttctcatccaaacacactctta 49052784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 396
Target Start/End: Complemental strand, 18789591 - 18789544
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctca 396  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||||    
T  18789591 aattcacctcaaagtatttgaattccctcgtaacattacattctctca 18789544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 34388353 - 34388424
Alignment:
Q  352 tcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||||||| |||||||| ||||||| ||||||||| ||||| | |||||  ||| ||||||||||||    
T  34388353 tcacctcaaagtagttgaattccctcaaaatattacattccctcaaaacattccatcattcaaacacactct 34388424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 423
Target Start/End: Original strand, 29065908 - 29065978
Alignment:
Q  353 cacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||| || |||||||| ||||||||||||||||  || || | ||||| |||||||||||||||||    
T  29065908 cacctcaaaataattgaattccctcaaaacattacattaccttaaaacattcctccatccaaacacactct 29065978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 426
Target Start/End: Original strand, 40854054 - 40854132
Alignment:
Q  349 aattcacctcaaagtatttgaattctc-tcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||| ||||||||| |||||||| | |||||| ||||||||| ||||  | ||| ||||||||||||||||||||||    
T  40854054 aattcaactcaaagtagttgaattcccctcaaaatattacattccctcagaacatttccccatccaaacacactcttag 40854132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 391
Target Start/End: Complemental strand, 46069465 - 46069423
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattc 391  Q
    |||||||||||||||| |||||||| |||||||||||||||||    
T  46069465 aattcacctcaaagtagttgaattccctcaaaacattacattc 46069423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 349 - 390
Target Start/End: Original strand, 29639119 - 29639160
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacatt 390  Q
    |||| ||||||||||||||||||||||||| |||||||||||    
T  29639119 aatttacctcaaagtatttgaattctctcataacattacatt 29639160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 21635970 - 21636038
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaaca 417  Q
    |||||| ||||||||| || |||||  |||||||||||||||| ||||| | ||| |||||||||||||    
T  21635970 aattcatctcaaagtagttaaattccttcaaaacattacattccctcaaaacatttccccatccaaaca 21636038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 414
Target Start/End: Original strand, 22351871 - 22351922
Alignment:
Q  363 tatttgaattctctcaaaacattacattctctcaagatattcccccatccaa 414  Q
    ||||||||||||||||||||||||||||  | ||| | ||||||||||||||    
T  22351871 tatttgaattctctcaaaacattacattaccccaaaacattcccccatccaa 22351922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 426
Target Start/End: Complemental strand, 46481994 - 46481943
Alignment:
Q  375 ctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||||||||||||||| || | |||||  |||||||||||||||||||||    
T  46481994 ctcaaaacattacattctttcgaaatattttcccatccaaacacactcttag 46481943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 391
Target Start/End: Original strand, 49052870 - 49052912
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattc 391  Q
    ||||||||| |||||| |||||||| |||||||||||||||||    
T  49052870 aattcaccttaaagtagttgaattccctcaaaacattacattc 49052912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 385
Target Start/End: Original strand, 19865538 - 19865575
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    |||||||||||||||||||||||||  |||||||||||    
T  19865538 aaattcacctcaaagtatttgaatttcctcaaaacatt 19865575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 385
Target Start/End: Complemental strand, 26416028 - 26415991
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  26416028 aaattcacctcaaagtatttgaattcttttaaaacatt 26415991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 390
Target Start/End: Complemental strand, 31632876 - 31632835
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacatt 390  Q
    |||| |||||||||||||||||||| |||| |||||||||||    
T  31632876 aatttacctcaaagtatttgaattccctcataacattacatt 31632835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 385
Target Start/End: Original strand, 13814979 - 13815015
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  13814979 aattcacatcaaagtatttgaattccctcaaaacatt 13815015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 385
Target Start/End: Complemental strand, 45984414 - 45984378
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    ||||||||||||||||||||||||| || ||||||||    
T  45984414 aattcacctcaaagtatttgaattcccttaaaacatt 45984378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 385
Target Start/End: Complemental strand, 45988774 - 45988738
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    ||||||||||||||||||||||||| || ||||||||    
T  45988774 aattcacctcaaagtatttgaattcccttaaaacatt 45988738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 23536141 - 23536065
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||||||    
T  23536141 aattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 23536065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 15034744 - 15034818
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||||    
T  15034744 aattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 15034818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 24273219 - 24273293
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||||||||||||||||||| |||| |||||||||||| ||||| | |||||||||||||||||||||||    
T  24273219 aattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 24273293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 348 - 426
Target Start/End: Original strand, 43622976 - 43623054
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||||||||||||||||| |||| ||||||||||||||||||  |||| | ||||||||||||||||||||||||||    
T  43622976 aaattcacctcaaagtatttaaattttctcaaaacattacattccatcaaaacattcccccatccaaacacactcttag 43623054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 26501078 - 26501154
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    ||||||| ||||||||||||||||| ||||||||||||||||| ||||| | ||||| |||||||||||||||||||    
T  26501078 aattcacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctta 26501154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 50005153 - 50005077
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||||||||||| | |||||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  50005153 aattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaacacactctta 50005077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 4038160 - 4038234
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||| |||||| |||||||| ||||||||||||| ||| ||||| |||||||||||||||||||||||||    
T  4038160 aattcaccttaaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 4038234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 353 - 423
Target Start/End: Original strand, 6470689 - 6470759
Alignment:
Q  353 cacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||||| |||||||||| ||||||||||||||||||||||| | ||||| |||||||||||||||||    
T  6470689 cacctcaaagaatttgaattccctcaaaacattacattctctcaaaacattccgccatccaaacacactct 6470759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 423
Target Start/End: Complemental strand, 34756501 - 34756427
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||| | |||||||||||||||||| ||||    
T  34756501 aattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacactctct 34756427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 425
Target Start/End: Complemental strand, 4038146 - 4038073
Alignment:
Q  352 tcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||||| | ||||||||| |||||||||||||||    
T  4038146 tcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccacccaaacacactctta 4038073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 426
Target Start/End: Complemental strand, 8224842 - 8224765
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||| ||||| | |||||| |||||||||||||||||||    
T  8224842 aattcacatcaaagtatttcaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactcttag 8224765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 426
Target Start/End: Complemental strand, 38277489 - 38277412
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||||||||||||| ||||||||  |||||||||||||||| ||||| |||||| | |||||||||||||||||||    
T  38277489 aattcacctcaaagtagttgaattccttcaaaacattacattccctcaaaatattctctcatccaaacacactcttag 38277412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 15034733 - 15034657
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    ||||||||| |||||| |||||||| ||||||||||||||||| ||||| | ||||| |||||||||||||||||||    
T  15034733 aattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctta 15034657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 420
Target Start/End: Complemental strand, 45565468 - 45565397
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacac 420  Q
    ||||||||| ||| || |||||||| ||||||||||||||||||||||| | ||||||||||||||||||||    
T  45565468 aattcaccttaaaatagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacacac 45565397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 30190221 - 30190295
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||||||| || |||||||  ||||||||||||||||| ||||| | |||||||||||||||||||||||    
T  30190221 aattcacctcaaaatagttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacacactct 30190295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 349 - 426
Target Start/End: Original strand, 27935570 - 27935647
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||| ||||||||| |||||||  ||||||||||||||||| ||||| ||||| | ||||||||||||||||||||    
T  27935570 aattcaactcaaagtagttgaatttcctcaaaacattacattccctcaaaatatttctccatccaaacacactcttag 27935647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 349 - 426
Target Start/End: Original strand, 28632585 - 28632661
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||| | | |||||| |||||||||||||| ||||    
T  28632585 aattcacctcaaagtatt-gaattctctcaaaacattacattccctccaaacattccctcatccaaacacactattag 28632661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 353 - 421
Target Start/End: Original strand, 40264119 - 40264187
Alignment:
Q  353 cacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    ||||||||| || |||||||| ||||||||||||||||  ||||| |||||||||||||||||||||||    
T  40264119 cacctcaaaataattgaattccctcaaaacattacattacctcaaaatattcccccatccaaacacact 40264187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 419
Target Start/End: Complemental strand, 27804339 - 27804269
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacaca 419  Q
    ||||||||||||| || |||||||| ||||||| ||||||||| ||||| | |||||||||||||||||||    
T  27804339 aattcacctcaaaatagttgaattccctcaaaatattacattccctcaaaacattcccccatccaaacaca 27804269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 47165211 - 47165285
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||| ||||||||||||||| ||||||||||||||||  ||||| | ||| | |||||||||||||||||    
T  47165211 aattcaccttaaagtatttgaattccctcaaaacattacatttcctcaaaacatttctccatccaaacacactct 47165285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 427
Target Start/End: Complemental strand, 49659290 - 49659213
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttagt 427  Q
    ||||||||||||||||||| ||||| |||  |||||||||||| ||||| | ||| |||||||||||||||||||||||    
T  49659290 aattcacctcaaagtatttaaattccctcgtaacattacattccctcaatacatt-ccccatccaaacacactcttagt 49659213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 351 - 424
Target Start/End: Original strand, 32287934 - 32288007
Alignment:
Q  351 ttcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctt 424  Q
    ||||| ||||||||||||||||  ||||||||||||||||| ||||| |  |||| ||||||||||||||||||    
T  32287934 ttcacttcaaagtatttgaatttcctcaaaacattacattccctcaaaactttcctccatccaaacacactctt 32288007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 37448400 - 37448465
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaa 414  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||||||||| | |||||| |||||||    
T  37448400 aattcacatcaaagtatttaaattccctcaaaacattacattctctcaaaacattccctcatccaa 37448465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 31166384 - 31166308
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||| |||||| |||||| ||||  ||||||||||||||| |||||| | |||||| ||||||||||||||||||    
T  31166384 aattcatctcaaaatatttgcattccatcaaaacattacattatctcaaaacattccctcatccaaacacactctta 31166308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 353 - 421
Target Start/End: Original strand, 50005168 - 50005236
Alignment:
Q  353 cacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    ||||||||| || |||||||| ||||||||||||||||  ||||| ||||||| |||||||||||||||    
T  50005168 cacctcaaaataattgaattccctcaaaacattacattacctcaaaatattcctccatccaaacacact 50005236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 357 - 420
Target Start/End: Original strand, 37036956 - 37037019
Alignment:
Q  357 tcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacac 420  Q
    ||||| ||||||||||| ||||||||||||||||| ||||| | |||||| |||||||||||||    
T  37036956 tcaaaatatttgaattccctcaaaacattacattcactcaaaacattccctcatccaaacacac 37037019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 416
Target Start/End: Original strand, 37447901 - 37447968
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaac 416  Q
    |||||||||||| ||||||||||||  |||||||||||||||| ||| | ||||||||| ||||||||    
T  37447901 aattcacctcaaggtatttgaattccttcaaaacattacattccctccaaatattcccctatccaaac 37447968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 433
Target Start/End: Original strand, 44410413 - 44410480
Alignment:
Q  366 ttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttagtgttgag 433  Q
    |||||||| |||||||| |||||||  ||||| ||||||||| |||||||||||||||||||| ||||    
T  44410413 ttgaattccctcaaaactttacattacctcaaaatattccccaatccaaacacactcttagtgatgag 44410480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 423
Target Start/End: Complemental strand, 44410385 - 44410311
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||||||| || |||||||| || |||||||||||||| ||||| | |||| |||||||||| |||||||    
T  44410385 aattcacctcaaaatagttgaattcgcttaaaacattacattccctcaaaacattctcccatccaaatacactct 44410311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 353 - 422
Target Start/End: Original strand, 32573011 - 32573080
Alignment:
Q  353 cacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactc 422  Q
    |||||||||  | |||||||| ||||||||||||||||  ||||| |||||||||||||||| |||||||    
T  32573011 cacctcaaaagaattgaattccctcaaaacattacattacctcaaaatattcccccatccaatcacactc 32573080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 421
Target Start/End: Original strand, 38277499 - 38277571
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    |||| ||||||||| || |||||||| ||||||||||||||||  ||||| ||||| |||||||||||||||||    
T  38277499 aaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatatt-ccccatccaaacacact 38277571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 44570752 - 44570687
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaa 414  Q
    |||||||||||| ||||||||||||  |||||||||||||||| ||||| | |||| |||||||||    
T  44570752 aattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattctcccatccaa 44570687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 421
Target Start/End: Complemental strand, 28745870 - 28745799
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    ||||||||| ||| || |||||||| |||||| |||||||||| ||||| ||||||||||||||||| |||||    
T  28745870 aattcaccttaaa-taattgaattccctcaaaccattacattccctcaaaatattcccccatccaaatacact 28745799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 421
Target Start/End: Original strand, 34756516 - 34756584
Alignment:
Q  353 cacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    ||||||||| || |||||||| |||||||||||| |||  ||||| ||||| |||||||||||||||||    
T  34756516 cacctcaaaataattgaattccctcaaaacattatattacctcaaaatatttccccatccaaacacact 34756584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 391
Target Start/End: Original strand, 47541986 - 47542029
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattc 391  Q
    |||||||||||||||||||| |||||||||| ||||||||||||    
T  47541986 aaattcacctcaaagtatttaaattctctcataacattacattc 47542029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 349 - 418
Target Start/End: Original strand, 28745881 - 28745950
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacac 418  Q
    ||||||||||||| || |||||||| ||||||| ||||||||| || || |||||| | |||||||||||    
T  28745881 aattcacctcaaaatagttgaattccctcaaaatattacattcccttaaaatattctctcatccaaacac 28745950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 349 - 426
Target Start/End: Complemental strand, 29446823 - 29446747
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    ||||||||| ||| || |||||||| |||||||||||||||||  |||| | |||||||| | |||||||||||||||    
T  29446823 aattcaccttaaa-tagttgaattccctcaaaacattacattccttcaaaacattcccccgttcaaacacactcttag 29446747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 27804350 - 27804426
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||| || |||||| ||||||||  || ||||||||||||  ||||| | ||||| |||||||||||||||||||    
T  27804350 aattcaacttaaagtagttgaattccttctaaacattacatttcctcaaaacattcctccatccaaacacactctta 27804426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 385
Target Start/End: Original strand, 37447358 - 37447394
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    ||||||| |||||||||||||||||||||||||||||    
T  37447358 aattcacatcaaagtatttgaattctctcaaaacatt 37447394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 423
Target Start/End: Original strand, 49216336 - 49216412
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaaca-ttacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||| |||||||||||||||||||| ||| ||||| |||| |||| |||| | ||| || ||||||||||||||||    
T  49216336 aaatttacctcaaagtatttgaattccctcgaaacatttacgttctttcaaaacatttccacatccaaacacactct 49216412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 391
Target Start/End: Original strand, 5474484 - 5474526
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattc 391  Q
    ||||||||| |||||| |||||||| |||||||||||||||||    
T  5474484 aattcaccttaaagtagttgaattccctcaaaacattacattc 5474526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 426
Target Start/End: Complemental strand, 17502233 - 17502195
Alignment:
Q  388 attctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  17502233 attctctcaaaatattccctcatccaaacacactcttag 17502195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 411
Target Start/End: Complemental strand, 31195530 - 31195468
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatc 411  Q
    ||||||||||||| ||||| ||||  |||| |||||||||||| ||||| ||||||| |||||    
T  31195530 aattcacctcaaaatatttaaatttcctcagaacattacattccctcaaaatattcctccatc 31195468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 378
Target Start/End: Complemental strand, 34003535 - 34003506
Alignment:
Q  349 aattcacctcaaagtatttgaattctctca 378  Q
    ||||||||||||||||||||||||||||||    
T  34003535 aattcacctcaaagtatttgaattctctca 34003506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 390
Target Start/End: Complemental strand, 37214889 - 37214852
Alignment:
Q  353 cacctcaaagtatttgaattctctcaaaacattacatt 390  Q
    ||||||||| || |||||||||||||||||||||||||    
T  37214889 cacctcaaaataattgaattctctcaaaacattacatt 37214852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 425
Target Start/End: Original strand, 39589119 - 39589180
Alignment:
Q  364 atttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||| |||||| |||||| ||||| ||  ||||||||| ||||||||||||||||| |||||    
T  39589119 atttcaattctttcaaaaaattacgttacctcaagataatcccccatccaaacacattctta 39589180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 426
Target Start/End: Complemental strand, 39887201 - 39887124
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    ||||||| ||||||||||||||||   ||||||||| | |||| || || | |||||| |||| ||||||||||||||    
T  39887201 aattcacatcaaagtatttgaatttcttcaaaacatcatattcccttaaaacattccctcatctaaacacactcttag 39887124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 385
Target Start/End: Original strand, 45565478 - 45565515
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  45565478 aaattcacctcaaagtagttgaattccctcaaaacatt 45565515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 382
Target Start/End: Complemental strand, 50471828 - 50471791
Alignment:
Q  345 ataaaattcacctcaaagtatttgaattctctcaaaac 382  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  50471828 ataaaattcacctgaaagtatttgaattccctcaaaac 50471791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 381
Target Start/End: Complemental strand, 17502254 - 17502222
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaa 381  Q
    |||||||||||||||| ||||||||||||||||    
T  17502254 aattcacctcaaagtagttgaattctctcaaaa 17502222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 385
Target Start/End: Complemental strand, 32128104 - 32128068
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    |||||||| |||||||||||||||| |||||||||||    
T  32128104 aattcaccacaaagtatttgaattccctcaaaacatt 32128068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 385
Target Start/End: Complemental strand, 32572996 - 32572960
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    |||||||||||||||| |||||||| |||||||||||    
T  32572996 aattcacctcaaagtagttgaattccctcaaaacatt 32572960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 421
Target Start/End: Complemental strand, 34003451 - 34003379
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    ||||||||||||||||||||||| | ||||||| |||| |||   | || |||||| | ||||||||||||||    
T  34003451 aattcacctcaaagtatttgaatgccctcaaaatattatattgctttaaaatattcactcatccaaacacact 34003379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 385
Target Start/End: Complemental strand, 44571275 - 44571239
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  44571275 aattcacttcaaagtatttgaattccctcaaaacatt 44571239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 46672801 - 46672875
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||||    
T  46672801 aattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 46672875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 349 - 426
Target Start/End: Original strand, 27251979 - 27252056
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||| | || |||||||||||||||||||||||    
T  27251979 aattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacatccccccatccaaacacactcttag 27252056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 349 - 426
Target Start/End: Original strand, 44692907 - 44692984
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||| | ||||| ||||||||||||||||||||    
T  44692907 aattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactcttag 44692984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 9129429 - 9129505
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||| | |||||| ||||||||||||||||||    
T  9129429 aattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactctta 9129505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 9137536 - 9137612
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||| | |||||| ||||||||||||||||||    
T  9137536 aattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactctta 9137612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 419
Target Start/End: Original strand, 21307530 - 21307600
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacaca 419  Q
    ||||||||||||||||||||||||| ||||||||||||||||| | ||| | |||||||||||||||||||    
T  21307530 aattcacctcaaagtatttgaattccctcaaaacattacattcccgcaaaacattcccccatccaaacaca 21307600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 36397987 - 36398061
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||| |||||||||||||||| ||||||||| ||||||| ||||| | |||||||||||||||||||||||    
T  36397987 aattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacacactct 36398061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 348 - 426
Target Start/End: Original strand, 42005950 - 42006028
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    ||||||||||||| |||||| |||||  |||||||||||||||| ||||| | ||||||||||||||||||||||||||    
T  42005950 aaattcacctcaaggtatttaaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactcttag 42006028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 423
Target Start/End: Complemental strand, 47767506 - 47767432
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||||||| ||||||||||||  |||||||||||||||| ||||| | |||||||||||||||||||||||    
T  47767506 aattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactct 47767432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 426
Target Start/End: Complemental strand, 49457417 - 49457340
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    ||||||||| |||||  |||||||| ||||||||||||||||| ||||| | ||||||||||||||||||||||||||    
T  49457417 aattcaccttaaagtggttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactcttag 49457340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 352 - 424
Target Start/End: Complemental strand, 5415854 - 5415782
Alignment:
Q  352 tcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctt 424  Q
    |||||| |||||| |||||||| ||||||||||||||||| ||||| ||||||||| ||||||||||||||||    
T  5415854 tcaccttaaagtagttgaattccctcaaaacattacattccctcaaaatattcccctatccaaacacactctt 5415782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 7302420 - 7302344
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||||||||| |||| |||||||  |||||||||||||||||||||| | |||||| ||||||||||||||||||    
T  7302420 aattcacctcaaggtatctgaattccttcaaaacattacattctctcaaaacattccctcatccaaacacactctta 7302344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 348 - 423
Target Start/End: Complemental strand, 37054469 - 37054394
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||||||| ||||||||||||  |||||||||||||||| || || | |||||||||||||||||||||||    
T  37054469 aaattcacctcaaggtatttgaattccttcaaaacattacattcccttaaaacattcccccatccaaacacactct 37054394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 5415868 - 5415942
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||| |||||| ||||||||  |||||||||||| ||| ||||| |||||||||||||||||||||||||    
T  5415868 aattcaccttaaagtagttgaattccatcaaaacattactttccctcaaaatattcccccatccaaacacactct 5415942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 345 - 423
Target Start/End: Original strand, 31189391 - 31189469
Alignment:
Q  345 ataaaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||| |||||||||||||||||||||||||||||||||||||  ||||| | |||| | ||| ||||||||||||    
T  31189391 ataaaatttacctcaaagtatttgaattctctcaaaacattacattacctcaaaacattctctcattcaaacacactct 31189469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 423
Target Start/End: Complemental strand, 48947679 - 48947605
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||| |||||||||||||||||||||||||| ||||||| ||||| | ||||  |||||||||||||||||    
T  48947679 aattcaccccaaagtatttgaattctctcaaaacaatacattccctcaaaacattcttccatccaaacacactct 48947605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 349 - 426
Target Start/End: Complemental strand, 34088645 - 34088568
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||||| |||||||||||||||| ||||||||| ||||||| ||||| | ||| | ||||||||||||||||||||    
T  34088645 aattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttctccatccaaacacactcttag 34088568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 349 - 426
Target Start/End: Complemental strand, 44436332 - 44436255
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    ||||||||| ||| || |||||||  ||||||||||||||||| ||||| | ||||||||||||||||||||||||||    
T  44436332 aattcaccttaaaatagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactcttag 44436255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 349 - 426
Target Start/End: Original strand, 53129841 - 53129918
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||||| |||||||||||||||| || |||||||||||||| ||| | | |||||| |||||||||||||||||||    
T  53129841 aattcaccccaaagtatttgaattcccttaaaacattacattccctcgaaacattccctcatccaaacacactcttag 53129918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 423
Target Start/End: Complemental strand, 28092288 - 28092214
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||||||||||| |||||||| |||||||||| |||||  ||||| | ||||||||||||||||| |||||    
T  28092288 aattcacctcaaagtaattgaattccctcaaaacatcacatttcctcaaaacattcccccatccaaacatactct 28092214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 423
Target Start/End: Complemental strand, 44692896 - 44692822
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||| |||||  |||||||| ||||||||||||| ||| ||||| | |||||||||||||||||||||||    
T  44692896 aattcaccttaaagtggttgaattccctcaaaacattactttccctcaaaacattcccccatccaaacacactct 44692822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 9129418 - 9129342
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||| || |||||| ||||||||  |||||||||||||||| ||||| ||| || ||||||||||||||||||||    
T  9129418 aattcaacttaaagtagttgaattccatcaaaacattacattccctcaaaatagtctcccatccaaacacactctta 9129342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 9137525 - 9137449
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    |||||| || |||||| ||||||||  |||||||||||||||| ||||| ||| || ||||||||||||||||||||    
T  9137525 aattcaacttaaagtagttgaattccatcaaaacattacattccctcaaaatagtctcccatccaaacacactctta 9137449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 423
Target Start/End: Original strand, 53470426 - 53470501
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||| |||||||||||||||| ||||||||| || |||| ||||| | ||| || ||||||||||||||||    
T  53470426 aaattcaccccaaagtatttgaattccctcaaaacaatagattccctcaaaacatttcctcatccaaacacactct 53470501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 415
Target Start/End: Complemental strand, 19475890 - 19475824
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaa 415  Q
    ||||||||||||||||||||||||  |||| |||||||||||| ||||| | ||||| |||||||||    
T  19475890 aattcacctcaaagtatttgaattacctcataacattacattccctcaaaacattcctccatccaaa 19475824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 407
Target Start/End: Complemental strand, 31070480 - 31070422
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccc 407  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||| | |||||||    
T  31070480 aattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccc 31070422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 423
Target Start/End: Complemental strand, 37321624 - 37321550
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||| |||||| |||||||  ||||||||||||| ||  ||||| ||||||||||||||||| |||||||    
T  37321624 aattcaccttaaagtagttgaatttcctcaaaacattacttttcctcaaaatattcccccatccaaatacactct 37321550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 353 - 423
Target Start/End: Original strand, 46429485 - 46429555
Alignment:
Q  353 cacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||| || ||||||||  |||||||||||||||  ||||| |||||||| ||||||||||||||||    
T  46429485 cacctcaaaataattgaattccttcaaaacattacattacctcaaaatattccctcatccaaacacactct 46429555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 426
Target Start/End: Original strand, 35279920 - 35279977
Alignment:
Q  369 aattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    ||||| ||||||||||||||||| ||||| | ||||||||||||||||||| ||||||    
T  35279920 aattcactcaaaacattacattccctcaaaacattcccccatccaaacacattcttag 35279977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 423
Target Start/End: Original strand, 47284316 - 47284385
Alignment:
Q  354 acctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||| || |||||||| ||||||||||||||||  ||||| |||||| | ||||||||||||||||    
T  47284316 acctcaaaataattgaattccctcaaaacattacattacctcaaaatattctctcatccaaacacactct 47284385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 427
Target Start/End: Complemental strand, 46001420 - 46001360
Alignment:
Q  367 tgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttagt 427  Q
    ||||||| ||| ||||||||||||  ||||| ||||||| |||||||||||||||||||||    
T  46001420 tgaattccctcgaaacattacattacctcaaaatattccgccatccaaacacactcttagt 46001360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 423
Target Start/End: Complemental strand, 39110468 - 39110394
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||| ||||||||| |||||||| | ||||||||||||||| ||||| | ||| |  ||||||||||||||||    
T  39110468 aattcaactcaaagtagttgaattcccacaaaacattacattcgctcaaaacatttcttcatccaaacacactct 39110394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 349 - 390
Target Start/End: Original strand, 44436343 - 44436384
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacatt 390  Q
    |||||||||||||||| |||||||| ||||||||||||||||    
T  44436343 aattcacctcaaagtagttgaattccctcaaaacattacatt 44436384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 397
Target Start/End: Complemental strand, 30766627 - 30766579
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaa 397  Q
    |||||||||||| ||||||||||||  |||||||||||||||| |||||    
T  30766627 aattcacctcaaggtatttgaattccttcaaaacattacattccctcaa 30766579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 421
Target Start/End: Original strand, 39215927 - 39215995
Alignment:
Q  353 cacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    ||||||||| || ||||||| ||||||||||||| |||  ||||| |||||| | ||||||||||||||    
T  39215927 cacctcaaaataattgaattttctcaaaacattatattacctcaaaatattctctcatccaaacacact 39215995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 426
Target Start/End: Complemental strand, 42130749 - 42130689
Alignment:
Q  366 ttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||||| |||||||||||||||   ||||| ||||||||||| ||||||||||| ||||    
T  42130749 ttgaattccctcaaaacattacatcacctcaaaatattcccccacccaaacacactattag 42130689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 396
Target Start/End: Complemental strand, 8762200 - 8762153
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctca 396  Q
    ||||||| ||||||||||||||||| |||| ||||||||||| |||||    
T  8762200 aattcacatcaaagtatttgaattccctcataacattacattatctca 8762153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 420
Target Start/End: Complemental strand, 52527110 - 52527039
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacac 420  Q
    |||| ||||||||||||||||||||   || |||||||||| |  |||| | ||||||||||||||||||||    
T  52527110 aatttacctcaaagtatttgaattcctccataacattacatcccttcaaaacattcccccatccaaacacac 52527039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 426
Target Start/End: Complemental strand, 21730976 - 21730899
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    ||||||| |||||| |||||||||||  ||||||||||||||   || | || |||||| |||||||||||||||||||    
T  21730976 aaattcatctcaaa-tatttgaattccttcaaaacattacataaccttaggacattccctcatccaaacacactcttag 21730899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 423
Target Start/End: Original strand, 31070495 - 31070565
Alignment:
Q  353 cacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||| || |||||||| ||||||||||||||||  ||||| |||||| || || |||||| |||||    
T  31070495 cacctcaaaataattgaattccctcaaaacattacattacctcaaaatattctccaattcaaacatactct 31070565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 397
Target Start/End: Complemental strand, 8762274 - 8762233
Alignment:
Q  356 ctcaaagtatttgaattctctcaaaacattacattctctcaa 397  Q
    |||||||||||||||||| |||| ||||||||||| ||||||    
T  8762274 ctcaaagtatttgaattccctcataacattacattttctcaa 8762233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 10793003 - 10793048
Alignment:
Q  345 ataaaattcacctcaaagtatttgaattctctcaaaacattacatt 390  Q
    |||||||| |||| |||  |||||||||||||||||||||||||||    
T  10793003 ataaaatttacctaaaacgatttgaattctctcaaaacattacatt 10793048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 390
Target Start/End: Complemental strand, 19475971 - 19475930
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacatt 390  Q
    |||| |||||||||||||||||||| |||| |||||||||||    
T  19475971 aatttacctcaaagtatttgaattccctcataacattacatt 19475930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 378
Target Start/End: Original strand, 28182242 - 28182275
Alignment:
Q  345 ataaaattcacctcaaagtatttgaattctctca 378  Q
    ||||||||||||||||||||||||||||| ||||    
T  28182242 ataaaattcacctcaaagtatttgaattccctca 28182275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 423
Target Start/End: Complemental strand, 46635926 - 46635857
Alignment:
Q  354 acctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||| ||||||||||||||  ||||||||||||||||  ||||| | |||  | ||||||||||||||||    
T  46635926 acctaaaagtatttgaatttcctcaaaacattacattagctcaaaacattttctcatccaaacacactct 46635857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 391
Target Start/End: Complemental strand, 46706726 - 46706682
Alignment:
Q  349 aattcacctcaaagtattt--gaattctctcaaaacattacattc 391  Q
    |||||||||||||||||||  |||||||||| |||||||||||||    
T  46706726 aattcacctcaaagtatttaagaattctctcgaaacattacattc 46706682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 385
Target Start/End: Complemental strand, 332048 - 332012
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    |||||||||||||||| |||||||| |||||||||||    
T  332048 aattcacctcaaagtagttgaattccctcaaaacatt 332012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 353 - 389
Target Start/End: Original strand, 13339465 - 13339501
Alignment:
Q  353 cacctcaaagtatttgaattctctcaaaacattacat 389  Q
    ||||| ||||| |||||||||||||||||||||||||    
T  13339465 cacctaaaagtctttgaattctctcaaaacattacat 13339501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 385
Target Start/End: Original strand, 38506874 - 38506910
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  38506874 aattcacctcaaattatttgaattccctcaaaacatt 38506910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 349 - 426
Target Start/End: Complemental strand, 4149 - 4072
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||   ||||||||||||||||||    
T  4149 aattcacctcaaagtatttgaattccctcaaaacattacattctctcaaaacattcctttatccaaacacactcttag 4072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 348 - 427
Target Start/End: Complemental strand, 28918240 - 28918161
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttagt 427  Q
    |||||||||||||||||||||||||  || |||||||||||||| ||||| | ||||| |||||||||||||||||||||    
T  28918240 aaattcacctcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacacactcttagt 28918161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 423
Target Start/End: Complemental strand, 9285721 - 9285647
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||| ||||||||| |||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||||    
T  9285721 aattcagctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 9285647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 348 - 423
Target Start/End: Complemental strand, 13487350 - 13487275
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||||||||||||||||||||| |||| |||| ||||||| ||||| | ||||||||||| |||||||||||    
T  13487350 aaattcacctcaaagtatttgaattccctcataacactacattccctcaaaacattcccccatctaaacacactct 13487275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 29889433 - 29889507
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||| ||||||||||||||||| |||||||||||||||||  |||| | ||||| |||||||||||||||||    
T  29889433 aattcacatcaaagtatttgaattccctcaaaacattacattccatcaaaacattcctccatccaaacacactct 29889507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 357 - 423
Target Start/End: Original strand, 34244987 - 34245053
Alignment:
Q  357 tcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||||||||||| ||||||||||||||||| ||||| | ||||| |||||||||||||||||    
T  34244987 tcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 34245053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 421
Target Start/End: Complemental strand, 6919782 - 6919710
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    |||||||||||||||| |||||||| ||||||||||||||||| |||||   ||||| |||||||||||||||    
T  6919782 aattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaccattcctccatccaaacacact 6919710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 421
Target Start/End: Complemental strand, 9763086 - 9763014
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||| | ||| |||| ||||||||||||    
T  9763086 aattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccttccaaacacact 9763014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 359 - 426
Target Start/End: Original strand, 8574760 - 8574827
Alignment:
Q  359 aaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||| |||||||| ||||||||||||||||| ||||| | ||| ||||||||||||||||||||||    
T  8574760 aaagtagttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacacactcttag 8574827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 423
Target Start/End: Complemental strand, 1368551 - 1368477
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||||||||||  |||||||||| || |||| ||||||||||||||| | ||||| |||||||||||||||||    
T  1368551 aattcacctcaaaacatttgaattcccttaaaatattacattctctcaaaacattcctccatccaaacacactct 1368477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 366 - 426
Target Start/End: Original strand, 6919809 - 6919869
Alignment:
Q  366 ttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    |||||||| ||||||||||||| ||| ||||| | ||||||||||||||||||||||||||    
T  6919809 ttgaattccctcaaaacattactttccctcaaaacattcccccatccaaacacactcttag 6919869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 359 - 423
Target Start/End: Complemental strand, 8574759 - 8574695
Alignment:
Q  359 aaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||| |||||||| ||||||||||||||||| ||||| | ||| |||||||||||||||||||    
T  8574759 aaagtagttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacacactct 8574695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 353 - 425
Target Start/End: Original strand, 9763101 - 9763173
Alignment:
Q  353 cacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    ||||||| | || |||||||| ||||||||||||||||  ||||| ||||||| |||||||||||||||||||    
T  9763101 cacctcacaataattgaattccctcaaaacattacattacctcaaaatattcctccatccaaacacactctta 9763173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 343 - 419
Target Start/End: Original strand, 15299504 - 15299579
Alignment:
Q  343 ttataaaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacaca 419  Q
    |||| ||||||||||||||||| ||||||||  |||||||||||||||| ||||| | ||| |||||||||||||||    
T  15299504 ttattaaattcacctcaaagtagttgaattccttcaaaacattacattccctcaaaacatt-ccccatccaaacaca 15299579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 410
Target Start/End: Complemental strand, 15299471 - 15299412
Alignment:
Q  351 ttcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccat 410  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| | ||||| ||||    
T  15299471 ttcacctcaaagtagttgaattctctcaaaacattacattcgctcaaaacattcctccat 15299412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 427
Target Start/End: Original strand, 776165 - 776243
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttagt 427  Q
    ||||||||| |||||| |||||||  ||||||||||||||||| ||||| | |||  || |||||||||||||||||||    
T  776165 aattcaccttaaagtagttgaatttcctcaaaacattacattccctcaaaacattttcctatccaaacacactcttagt 776243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 349 - 390
Target Start/End: Original strand, 6358250 - 6358291
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacatt 390  Q
    |||||||| |||||||||| ||||||||||||||||||||||    
T  6358250 aattcaccacaaagtatttaaattctctcaaaacattacatt 6358291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 391
Target Start/End: Complemental strand, 15832541 - 15832498
Alignment:
Q  348 aaattcacctcaaagtatttgaattctctcaaaacattacattc 391  Q
    ||||||||| |||||||||||||||| || ||||||||||||||    
T  15832541 aaattcaccccaaagtatttgaattcccttaaaacattacattc 15832498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 396
Target Start/End: Complemental strand, 34364817 - 34364770
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctca 396  Q
    ||||||||||||||||||| ||||| |||| |||||||||||| ||||    
T  34364817 aattcacctcaaagtatttaaattccctcataacattacattccctca 34364770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 423
Target Start/End: Complemental strand, 776144 - 776080
Alignment:
Q  359 aaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||||| |||||||  ||||||||||||||||| ||||| | ||| | ||||| |||||||||||    
T  776144 aaagtagttgaatttcctcaaaacattacattccctcaaaacatttctccatctaaacacactct 776080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 385
Target Start/End: Complemental strand, 1195407 - 1195371
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacatt 385  Q
    |||||||||||||||||||||| || |||||||||||    
T  1195407 aattcacctcaaagtatttgaaatccctcaaaacatt 1195371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 423
Target Start/End: Complemental strand, 33733472 - 33733432
Alignment:
Q  383 attacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||| ||||| | |||||||||||||||||||||||    
T  33733472 attacattccctcaaaacattcccccatccaaacacactct 33733432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 421
Target Start/End: Original strand, 493 - 562
Alignment:
Q  352 tcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||    
T  493 tcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 360 - 426
Target Start/End: Complemental strand, 468 - 402
Alignment:
Q  360 aagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    ||||| |||||||| ||||||||||||  ||| ||||| ||||||||||||||||||||||||||||    
T  468 aagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 421
Target Start/End: Complemental strand, 2100 - 2031
Alignment:
Q  352 tcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||    
T  2100 tcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 2031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 360 - 426
Target Start/End: Original strand, 2125 - 2191
Alignment:
Q  360 aagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    ||||| |||||||| ||||||||||||  ||| ||||| ||||||||||||||||||||||||||||    
T  2125 aagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 2191  T

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Target: scaffold0129 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 426
Target Start/End: Complemental strand, 19271 - 19195
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactcttag 426  Q
    ||||||||||||| ||||||||||| ||||||||||||||||| ||||| ||| ||||||||||||||||||| ||||    
T  19271 aattcacctcaaaatatttgaattc-ctcaaaacattacattccctcaaaatactcccccatccaaacacacttttag 19195  T

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Target: scaffold0129; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 421
Target Start/End: Original strand, 19784 - 19855
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    |||||||||||||||||||||||| ||| |||||||||||||| ||||| | | |||||||||||||||||||    
T  19784 aattcacctcaaagtatttgaattttcttaaaacattacattccctcaaaaca-tcccccatccaaacacact 19855  T

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Target: scaffold0009 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 423
Target Start/End: Complemental strand, 42080 - 41997
Alignment:
Q  340 aaattataaaattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    |||| ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||| | ||||| |||| ||||||||||||    
T  42080 aaataatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacacactct 41997  T

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Target: scaffold0009; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 365 - 425
Target Start/End: Original strand, 42079 - 42139
Alignment:
Q  365 tttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    ||||||||||||||||||||||||||| ||||| |  ||||||||||||||||||||||||    
T  42079 tttgaattctctcaaaacattacattccctcaaaacgttcccccatccaaacacactctta 42139  T

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Target: scaffold0318 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 423
Target Start/End: Complemental strand, 2940 - 2867
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactct 423  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||| | | ||||||||||| |||||||||||    
T  2940 aattcacctcaaa-tatttgaattccctcaaaacattacattctctcgaaacattcccccatctaaacacactct 2867  T

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Target: scaffold0048 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 421
Target Start/End: Complemental strand, 83017 - 82945
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    ||||||||| |||||| |||||||| ||||||||||||||||| ||||| | |||| ||||||||||||||||    
T  83017 aattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcacccatccaaacacact 82945  T

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Target: scaffold0044 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 419
Target Start/End: Original strand, 56359 - 56429
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacaca 419  Q
    ||||||||| |||||| |||||||| ||||||||||||| ||| ||||| |||||||| ||||||||||||    
T  56359 aattcaccttaaagtagttgaattccctcaaaacattactttccctcaaaatattccctcatccaaacaca 56429  T

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Target: scaffold0044; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Complemental strand, 56345 - 56306
Alignment:
Q  352 tcacctcaaagtatttgaattctctcaaaacattacattc 391  Q
    ||||||||||||| |||||||| |||||||||||||||||    
T  56345 tcacctcaaagtagttgaattccctcaaaacattacattc 56306  T

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Target: scaffold0400 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 422
Target Start/End: Original strand, 4497 - 4570
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactc 422  Q
    |||||||| |||| ||||||||||  |||||||||||| |||| ||||| | |||||| |||||||||||||||    
T  4497 aattcaccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacactc 4570  T

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Target: scaffold0365 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 422
Target Start/End: Original strand, 5141 - 5214
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactc 422  Q
    |||||||| |||| ||||||||||  |||||||||||| |||| ||||| | |||||| |||||||||||||||    
T  5141 aattcaccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacactc 5214  T

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Target: scaffold0027 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 422
Target Start/End: Complemental strand, 10960 - 10887
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactc 422  Q
    ||||||| ||||||||||||||||| ||||||||||||||||| || || | ||||  |||| |||||||||||    
T  10960 aattcacgtcaaagtatttgaattccctcaaaacattacattcccttaaaacattcttccattcaaacacactc 10887  T

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Target: scaffold0301 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 421
Target Start/End: Complemental strand, 7225 - 7153
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacact 421  Q
    |||||||  |||||||||||||||| || |||||| ||||||| ||||| | ||||| |||||||||||||||    
T  7225 aattcactccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 7153  T

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Target: scaffold0337 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 425
Target Start/End: Original strand, 15874 - 15938
Alignment:
Q  360 aagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    ||||||||||||||||||| | |||||||||| | ||| | | |||||||||||||||||||||||    
T  15874 aagtatttgaattctctcatagcattacattc-cccaaaacaatcccccatccaaacacactctta 15938  T

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Target: scaffold0065 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 425
Target Start/End: Original strand, 2916 - 2980
Alignment:
Q  360 aagtatttgaattctctcaaaacattacattctctcaagatattcccccatccaaacacactctta 425  Q
    ||||||||||||||||||| | |||||||||| | ||| | | |||||||||||||||||||||||    
T  2916 aagtatttgaattctctcatagcattacattc-cccaaaacaatcccccatccaaacacactctta 2980  T

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Target: scaffold0065; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 381
Target Start/End: Original strand, 9585 - 9617
Alignment:
Q  349 aattcacctcaaagtatttgaattctctcaaaa 381  Q
    |||| ||||||||||||||||||||||||||||    
T  9585 aatttacctcaaagtatttgaattctctcaaaa 9617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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