View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21660_low_34 (Length: 258)

Name: NF21660_low_34
Description: NF21660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21660_low_34
NF21660_low_34
[»] chr7 (55 HSPs)
chr7 (18-254)||(11304053-11304289)
chr7 (18-207)||(23664120-23664309)
chr7 (19-207)||(29797417-29797606)
chr7 (19-207)||(29801236-29801425)
chr7 (18-182)||(14105450-14105614)
chr7 (18-182)||(14415467-14415631)
chr7 (18-126)||(17505043-17505151)
chr7 (18-126)||(17548063-17548171)
chr7 (69-201)||(12207693-12207823)
chr7 (69-201)||(12201088-12201218)
chr7 (110-201)||(7530089-7530181)
chr7 (18-94)||(16107969-16108045)
chr7 (102-201)||(39994857-39994957)
chr7 (18-81)||(13864486-13864549)
chr7 (58-202)||(15727367-15727512)
chr7 (166-215)||(11311077-11311126)
chr7 (18-77)||(4325961-4326020)
chr7 (19-81)||(39431311-39431373)
chr7 (24-81)||(23557404-23557461)
chr7 (144-205)||(42042159-42042220)
chr7 (18-94)||(13648147-13648223)
chr7 (18-81)||(44190340-44190403)
chr7 (18-202)||(13256558-13256743)
chr7 (140-201)||(15214541-15214603)
chr7 (188-244)||(14168645-14168702)
chr7 (188-244)||(14172892-14172949)
chr7 (24-81)||(18455712-18455769)
chr7 (18-94)||(1856511-1856587)
chr7 (18-94)||(13917683-13917759)
chr7 (18-94)||(25926410-25926486)
chr7 (18-81)||(16462934-16462997)
chr7 (172-210)||(13664877-13664915)
chr7 (175-208)||(11382865-11382898)
chr7 (175-208)||(11389342-11389375)
chr7 (178-215)||(15168206-15168243)
chr7 (24-81)||(23556215-23556272)
chr7 (188-258)||(10520799-10520871)
chr7 (18-94)||(14188404-14188480)
chr7 (107-163)||(14249708-14249764)
chr7 (175-207)||(16009604-16009636)
chr7 (140-202)||(37726841-37726905)
chr7 (172-216)||(46625987-46626031)
chr7 (140-202)||(13848909-13848972)
chr7 (140-202)||(16574231-16574294)
chr7 (140-202)||(16591368-16591431)
chr7 (188-258)||(33405629-33405700)
chr7 (28-94)||(11661981-11662047)
chr7 (188-256)||(11854502-11854572)
chr7 (172-210)||(13679518-13679556)
chr7 (138-202)||(34958547-34958613)
chr7 (157-202)||(21230960-21231004)
chr7 (175-207)||(10895786-10895818)
chr7 (107-163)||(14265178-14265234)
chr7 (175-207)||(16677323-16677355)
chr7 (175-207)||(17651559-17651591)
[»] chr5 (28 HSPs)
chr5 (19-258)||(37804020-37804258)
chr5 (18-258)||(41875539-41875779)
chr5 (18-207)||(9776971-9777160)
chr5 (175-258)||(28369999-28370082)
chr5 (60-201)||(7786090-7786229)
chr5 (175-258)||(19512414-19512496)
chr5 (63-201)||(26707287-26707423)
chr5 (63-201)||(26977021-26977157)
chr5 (107-202)||(17021914-17022010)
chr5 (188-254)||(23560689-23560755)
chr5 (51-202)||(21553390-21553541)
chr5 (18-94)||(18419317-18419393)
chr5 (18-94)||(27868685-27868761)
chr5 (18-94)||(33472674-33472750)
chr5 (140-202)||(36461032-36461095)
chr5 (138-201)||(17813468-17813533)
chr5 (175-210)||(18407936-18407971)
chr5 (143-203)||(6766749-6766811)
chr5 (188-257)||(20844050-20844120)
chr5 (157-234)||(23111167-23111244)
chr5 (188-258)||(19363549-19363621)
chr5 (187-254)||(21830520-21830588)
chr5 (143-202)||(21980067-21980127)
chr5 (188-258)||(22508484-22508556)
chr5 (18-81)||(22412952-22413015)
chr5 (188-258)||(22501903-22501975)
chr5 (140-202)||(24276499-24276563)
chr5 (140-202)||(24385650-24385714)
[»] chr6 (34 HSPs)
chr6 (18-258)||(12942995-12943235)
chr6 (18-202)||(28288510-28288693)
chr6 (51-201)||(9184999-9185150)
chr6 (102-201)||(18138497-18138596)
chr6 (172-258)||(25397198-25397284)
chr6 (58-202)||(1588649-1588794)
chr6 (166-215)||(25348506-25348555)
chr6 (140-209)||(1341-1411)
chr6 (140-209)||(8300-8370)
chr6 (116-209)||(21470738-21470832)
chr6 (18-94)||(13765212-13765288)
chr6 (18-94)||(23225968-23226044)
chr6 (18-94)||(23956728-23956804)
chr6 (140-202)||(1254820-1254883)
chr6 (188-258)||(10582500-10582570)
chr6 (18-81)||(14978665-14978728)
chr6 (18-81)||(20556156-20556219)
chr6 (148-209)||(21477271-21477332)
chr6 (188-256)||(23232510-23232579)
chr6 (18-79)||(25619023-25619084)
chr6 (116-205)||(25773516-25773607)
chr6 (18-81)||(611665-611728)
chr6 (175-210)||(9187523-9187558)
chr6 (140-202)||(34296193-34296256)
chr6 (18-84)||(31021842-31021908)
chr6 (188-244)||(18787097-18787154)
chr6 (178-215)||(23057969-23058006)
chr6 (140-202)||(1639946-1640010)
chr6 (175-207)||(4477885-4477917)
chr6 (18-94)||(23415770-23415846)
chr6 (175-234)||(23839226-23839286)
chr6 (18-94)||(27557528-27557604)
chr6 (140-202)||(15816661-15816725)
chr6 (166-206)||(18659448-18659488)
[»] chr4 (36 HSPs)
chr4 (19-207)||(15534988-15535176)
chr4 (18-207)||(36038676-36038865)
chr4 (18-200)||(49546949-49547130)
chr4 (18-126)||(33849608-33849716)
chr4 (18-126)||(16277366-16277474)
chr4 (18-126)||(53386976-53387084)
chr4 (69-201)||(32490662-32490792)
chr4 (51-201)||(15415882-15416031)
chr4 (51-201)||(16370724-16370872)
chr4 (80-201)||(15318849-15318969)
chr4 (116-205)||(15076323-15076414)
chr4 (188-257)||(18165378-18165447)
chr4 (18-81)||(15344800-15344863)
chr4 (18-202)||(18230606-18230791)
chr4 (120-205)||(15069727-15069814)
chr4 (18-81)||(12611776-12611839)
chr4 (18-81)||(15447501-15447564)
chr4 (18-81)||(51463152-51463215)
chr4 (18-94)||(28386109-28386185)
chr4 (18-81)||(23802528-23802591)
chr4 (140-202)||(56114762-56114825)
chr4 (188-244)||(17177369-17177426)
chr4 (140-202)||(14035731-14035795)
chr4 (140-202)||(24046480-24046543)
chr4 (24-81)||(13043893-13043950)
chr4 (138-209)||(17143224-17143297)
chr4 (188-258)||(53904435-53904507)
chr4 (140-202)||(21188963-21189026)
chr4 (188-258)||(52501475-52501546)
chr4 (189-257)||(16485671-16485741)
chr4 (138-198)||(30147927-30147989)
chr4 (36-94)||(45005828-45005886)
chr4 (138-201)||(14049590-14049655)
chr4 (157-202)||(15408150-15408194)
chr4 (188-244)||(16228224-16228281)
chr4 (166-207)||(22724681-22724722)
[»] chr2 (27 HSPs)
chr2 (19-207)||(10683930-10684118)
chr2 (19-207)||(20262026-20262214)
chr2 (18-207)||(13100732-13100921)
chr2 (18-126)||(23338478-23338586)
chr2 (18-122)||(20590365-20590469)
chr2 (102-201)||(25652174-25652273)
chr2 (51-201)||(24161179-24161328)
chr2 (175-258)||(6483745-6483829)
chr2 (175-258)||(6487212-6487296)
chr2 (140-202)||(23086390-23086452)
chr2 (18-94)||(41301040-41301116)
chr2 (18-81)||(7187291-7187354)
chr2 (18-81)||(22173101-22173164)
chr2 (18-81)||(43707171-43707234)
chr2 (140-201)||(10039062-10039124)
chr2 (157-210)||(23265153-23265205)
chr2 (157-210)||(23280221-23280273)
chr2 (175-210)||(21908387-21908422)
chr2 (188-258)||(25174883-25174954)
chr2 (18-94)||(21072799-21072875)
chr2 (18-94)||(31345985-31346061)
chr2 (187-233)||(22860992-22861039)
chr2 (177-207)||(23101458-23101488)
chr2 (178-215)||(19661441-19661478)
chr2 (102-163)||(22795837-22795898)
chr2 (230-258)||(24659841-24659869)
chr2 (188-258)||(35243643-35243715)
[»] chr3 (42 HSPs)
chr3 (18-207)||(12305928-12306117)
chr3 (18-209)||(3803679-3803870)
chr3 (18-207)||(29544031-29544220)
chr3 (18-201)||(55291605-55291788)
chr3 (18-200)||(54521628-54521810)
chr3 (18-207)||(46722584-46722773)
chr3 (175-258)||(9534355-9534438)
chr3 (69-201)||(15238978-15239108)
chr3 (18-126)||(10555172-10555280)
chr3 (51-201)||(11325049-11325199)
chr3 (80-205)||(12854988-12855112)
chr3 (18-94)||(13437104-13437180)
chr3 (51-202)||(13837039-13837190)
chr3 (18-81)||(16643948-16644011)
chr3 (18-94)||(42393-42469)
chr3 (18-81)||(6820035-6820098)
chr3 (140-202)||(11913784-11913847)
chr3 (140-202)||(51602525-51602588)
chr3 (189-258)||(11889260-11889329)
chr3 (18-80)||(24152509-24152571)
chr3 (18-84)||(43549776-43549842)
chr3 (18-94)||(5224188-5224264)
chr3 (18-94)||(10833416-10833492)
chr3 (18-94)||(15465960-15466036)
chr3 (175-210)||(17240505-17240540)
chr3 (175-210)||(18929273-18929308)
chr3 (140-202)||(30123374-30123437)
chr3 (18-81)||(50243678-50243741)
chr3 (188-257)||(12153875-12153945)
chr3 (24-94)||(16324651-16324721)
chr3 (178-215)||(14762745-14762782)
chr3 (188-258)||(17497198-17497269)
chr3 (18-94)||(26054545-26054621)
chr3 (188-257)||(13692941-13693012)
chr3 (69-127)||(15233110-15233166)
chr3 (138-202)||(2247650-2247716)
chr3 (140-201)||(30205613-30205675)
chr3 (24-81)||(43929262-43929319)
chr3 (230-258)||(11939004-11939032)
chr3 (230-258)||(11964030-11964058)
chr3 (230-258)||(12364439-12364467)
chr3 (175-207)||(20247784-20247816)
[»] scaffold0004 (2 HSPs)
scaffold0004 (76-201)||(385083-385208)
scaffold0004 (157-215)||(116907-116964)
[»] chr1 (24 HSPs)
chr1 (18-126)||(297221-297329)
chr1 (102-205)||(24476279-24476383)
chr1 (102-205)||(21526781-21526884)
chr1 (116-209)||(25091411-25091505)
chr1 (187-258)||(15315596-15315668)
chr1 (18-94)||(22130136-22130212)
chr1 (18-81)||(13880660-13880723)
chr1 (143-202)||(21180280-21180339)
chr1 (157-215)||(32651583-32651640)
chr1 (188-258)||(36615903-36615975)
chr1 (188-258)||(43089354-43089426)
chr1 (18-94)||(45574130-45574206)
chr1 (188-258)||(18419103-18419174)
chr1 (172-210)||(11158118-11158156)
chr1 (166-207)||(10811778-10811819)
chr1 (138-201)||(13227875-13227940)
chr1 (157-210)||(18712810-18712862)
chr1 (175-234)||(20436991-20437051)
chr1 (18-94)||(28313214-28313290)
chr1 (116-163)||(21986077-21986124)
chr1 (138-198)||(29536063-29536125)
chr1 (188-258)||(21963983-21964055)
chr1 (195-258)||(18025821-18025885)
chr1 (187-258)||(21665177-21665249)
[»] scaffold0090 (1 HSPs)
scaffold0090 (69-201)||(31449-31580)
[»] chr8 (37 HSPs)
chr8 (58-201)||(22617542-22617684)
chr8 (166-215)||(39364939-39364988)
chr8 (140-207)||(364852-364920)
chr8 (18-94)||(8413859-8413935)
chr8 (18-81)||(17460331-17460394)
chr8 (188-258)||(20258090-20258161)
chr8 (51-202)||(20387386-20387536)
chr8 (18-81)||(20455852-20455915)
chr8 (18-81)||(20463060-20463123)
chr8 (188-258)||(21044720-21044791)
chr8 (18-81)||(23661162-23661225)
chr8 (140-203)||(43113015-43113078)
chr8 (175-257)||(18614300-18614380)
chr8 (140-201)||(20494351-20494413)
chr8 (138-201)||(21860535-21860600)
chr8 (138-209)||(38184689-38184762)
chr8 (18-94)||(19882813-19882889)
chr8 (18-94)||(25483552-25483628)
chr8 (188-257)||(21685163-21685234)
chr8 (188-257)||(21689512-21689583)
chr8 (140-202)||(22433615-22433678)
chr8 (188-258)||(35541975-35542046)
chr8 (140-202)||(42559455-42559518)
chr8 (18-84)||(14397031-14397097)
chr8 (18-76)||(20455116-20455174)
chr8 (18-76)||(20460830-20460888)
chr8 (157-234)||(23482020-23482097)
chr8 (151-209)||(28854816-28854874)
chr8 (166-202)||(14056564-14056600)
chr8 (188-258)||(19860534-19860606)
chr8 (172-216)||(21931722-21931766)
chr8 (166-202)||(25111995-25112031)
chr8 (188-249)||(21682790-21682852)
chr8 (37-94)||(11775598-11775655)
chr8 (102-163)||(21299350-21299411)
chr8 (148-205)||(23646721-23646778)
chr8 (175-215)||(29643373-29643413)
[»] scaffold0016 (2 HSPs)
scaffold0016 (102-201)||(182049-182149)
scaffold0016 (19-81)||(174232-174294)
[»] scaffold0154 (1 HSPs)
scaffold0154 (188-258)||(17532-17602)
[»] scaffold0480 (1 HSPs)
scaffold0480 (102-205)||(1419-1523)
[»] scaffold0014 (1 HSPs)
scaffold0014 (51-201)||(189630-189779)
[»] scaffold0053 (1 HSPs)
scaffold0053 (172-258)||(79036-79122)
[»] scaffold0070 (1 HSPs)
scaffold0070 (19-182)||(8957-9119)
[»] scaffold0139 (1 HSPs)
scaffold0139 (172-258)||(14943-15027)
[»] scaffold1439 (1 HSPs)
scaffold1439 (18-81)||(941-1004)
[»] scaffold0790 (1 HSPs)
scaffold0790 (116-202)||(5421-5508)
[»] scaffold0094 (1 HSPs)
scaffold0094 (188-255)||(52290-52357)
[»] scaffold0956 (1 HSPs)
scaffold0956 (24-81)||(2219-2276)
[»] scaffold1276 (1 HSPs)
scaffold1276 (18-202)||(1005-1190)
[»] scaffold0453 (1 HSPs)
scaffold0453 (18-94)||(7121-7197)
[»] scaffold0422 (1 HSPs)
scaffold0422 (18-94)||(3829-3905)
[»] scaffold0364 (2 HSPs)
scaffold0364 (18-81)||(8029-8092)
scaffold0364 (143-206)||(8155-8219)
[»] scaffold0057 (1 HSPs)
scaffold0057 (18-81)||(72302-72365)
[»] scaffold0028 (1 HSPs)
scaffold0028 (172-258)||(69771-69856)
[»] scaffold0077 (1 HSPs)
scaffold0077 (140-257)||(22048-22168)
[»] scaffold0058 (1 HSPs)
scaffold0058 (18-94)||(39923-39999)
[»] scaffold0599 (1 HSPs)
scaffold0599 (140-202)||(1060-1123)
[»] scaffold0371 (1 HSPs)
scaffold0371 (143-202)||(8516-8575)
[»] scaffold0301 (1 HSPs)
scaffold0301 (188-258)||(4225-4295)
[»] scaffold0113 (1 HSPs)
scaffold0113 (188-258)||(26720-26790)
[»] scaffold0035 (1 HSPs)
scaffold0035 (188-258)||(1547-1617)
[»] scaffold0031 (2 HSPs)
scaffold0031 (172-257)||(121928-122015)
scaffold0031 (172-257)||(132804-132891)
[»] scaffold0635 (1 HSPs)
scaffold0635 (140-201)||(7946-8008)
[»] scaffold0106 (1 HSPs)
scaffold0106 (18-80)||(21849-21911)
[»] scaffold0020 (1 HSPs)
scaffold0020 (156-210)||(101920-101973)
[»] scaffold0222 (1 HSPs)
scaffold0222 (157-210)||(16831-16883)
[»] scaffold0180 (1 HSPs)
scaffold0180 (138-209)||(11615-11688)
[»] scaffold0156 (1 HSPs)
scaffold0156 (190-258)||(26603-26671)
[»] scaffold0151 (1 HSPs)
scaffold0151 (18-83)||(9960-10025)
[»] scaffold0071 (1 HSPs)
scaffold0071 (143-202)||(51991-52052)
[»] scaffold0023 (2 HSPs)
scaffold0023 (24-81)||(163205-163262)
scaffold0023 (140-202)||(105988-106052)
[»] scaffold0207 (1 HSPs)
scaffold0207 (102-205)||(9606-9710)
[»] scaffold0200 (1 HSPs)
scaffold0200 (18-94)||(18459-18535)
[»] scaffold0173 (1 HSPs)
scaffold0173 (189-244)||(2306-2362)
[»] scaffold0022 (2 HSPs)
scaffold0022 (189-258)||(37759-37830)
scaffold0022 (189-258)||(135820-135891)
[»] scaffold0001 (3 HSPs)
scaffold0001 (18-94)||(169305-169381)
scaffold0001 (18-94)||(176658-176734)
scaffold0001 (188-251)||(179965-180030)
[»] scaffold0877 (1 HSPs)
scaffold0877 (18-81)||(2151-2214)
[»] scaffold0751 (1 HSPs)
scaffold0751 (188-258)||(1418-1489)
[»] scaffold0607 (1 HSPs)
scaffold0607 (144-201)||(3784-3843)
[»] scaffold0394 (1 HSPs)
scaffold0394 (18-81)||(12915-12978)
[»] scaffold0334 (3 HSPs)
scaffold0334 (188-258)||(9462-9532)
scaffold0334 (24-94)||(1996-2066)
scaffold0334 (143-202)||(2109-2169)
[»] scaffold0293 (1 HSPs)
scaffold0293 (19-94)||(19410-19485)
[»] scaffold0290 (1 HSPs)
scaffold0290 (18-81)||(938-1001)
[»] scaffold0146 (1 HSPs)
scaffold0146 (175-210)||(13660-13695)
[»] scaffold0125 (1 HSPs)
scaffold0125 (18-81)||(1174-1237)
[»] scaffold0083 (1 HSPs)
scaffold0083 (18-81)||(42162-42225)
[»] scaffold0037 (2 HSPs)
scaffold0037 (189-258)||(45348-45416)
scaffold0037 (19-75)||(82864-82920)
[»] scaffold0485 (1 HSPs)
scaffold0485 (140-202)||(3738-3798)
[»] scaffold0461 (1 HSPs)
scaffold0461 (175-209)||(1-35)
[»] scaffold0388 (1 HSPs)
scaffold0388 (51-203)||(15104-15256)
[»] scaffold0556 (1 HSPs)
scaffold0556 (188-244)||(4102-4159)
[»] scaffold0338 (1 HSPs)
scaffold0338 (140-203)||(2844-2909)
[»] scaffold0298 (1 HSPs)
scaffold0298 (138-205)||(587-656)
[»] scaffold0413 (1 HSPs)
scaffold0413 (140-202)||(11646-11710)
[»] scaffold0064 (1 HSPs)
scaffold0064 (143-201)||(68978-69038)
[»] scaffold0042 (1 HSPs)
scaffold0042 (138-196)||(67689-67749)
[»] scaffold0335 (1 HSPs)
scaffold0335 (140-201)||(1778-1841)
[»] scaffold0112 (1 HSPs)
scaffold0112 (18-81)||(23247-23310)
[»] scaffold0317 (1 HSPs)
scaffold0317 (172-210)||(1411-1449)
[»] scaffold0278 (1 HSPs)
scaffold0278 (36-94)||(23829-23887)
[»] scaffold0211 (1 HSPs)
scaffold0211 (188-218)||(10386-10416)
[»] scaffold0117 (3 HSPs)
scaffold0117 (148-202)||(34498-34552)
scaffold0117 (138-201)||(21833-21898)
scaffold0117 (22-94)||(42541-42613)
[»] scaffold0034 (1 HSPs)
scaffold0034 (140-201)||(33931-33993)
[»] scaffold0815 (1 HSPs)
scaffold0815 (172-205)||(1474-1507)
[»] scaffold0672 (1 HSPs)
scaffold0672 (138-201)||(7471-7536)
[»] scaffold0610 (1 HSPs)
scaffold0610 (188-257)||(6540-6607)
[»] scaffold0107 (1 HSPs)
scaffold0107 (157-202)||(40532-40576)
[»] scaffold0046 (1 HSPs)
scaffold0046 (116-161)||(71510-71555)
[»] scaffold0019 (1 HSPs)
scaffold0019 (157-202)||(135484-135528)
[»] scaffold0011 (2 HSPs)
scaffold0011 (188-240)||(147969-148022)
scaffold0011 (188-240)||(155156-155209)
[»] scaffold1461 (1 HSPs)
scaffold1461 (172-216)||(1471-1515)
[»] scaffold0483 (1 HSPs)
scaffold0483 (172-216)||(11007-11051)
[»] scaffold0235 (1 HSPs)
scaffold0235 (157-201)||(22594-22637)
[»] scaffold0216 (1 HSPs)
scaffold0216 (138-200)||(22327-22391)
[»] scaffold0049 (2 HSPs)
scaffold0049 (107-163)||(42111-42167)
scaffold0049 (107-163)||(52806-52862)
[»] scaffold0026 (1 HSPs)
scaffold0026 (103-163)||(36502-36562)


Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 18 - 254
Target Start/End: Original strand, 11304053 - 11304289
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11304053 ctatgtttattctacaatctgaacatcgattcttaacacaattgccatggtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 11304152  T
Q  118 ttcccaatttcaactagaactatgctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttaccttaattcagaagaaaaat 217  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11304153 ttcccaatttcaactagaactatgctaaaccaaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaattcagaagaaaaat 11304252  T
Q  218 ggacaacgatcggattcccttggctctacttgctctt 254  Q
    | |||||||||||||||||||||||||||||||||||    
T  11304253 gcacaacgatcggattcccttggctctacttgctctt 11304289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 18 - 207
Target Start/End: Complemental strand, 23664309 - 23664120
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23664309 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 23664210  T
Q  118 ttcccaatttcaactagaactatgctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttaccttaattca 207  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  23664209 ttcccaatttcaactagaactatgctaaaccaaaatcagaattatataaccattatcattgagagatagtctcacccttacctgaattca 23664120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 29797417 - 29797606
Alignment:
Q  19 tatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaa-acctaacccccaa 117  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29797417 tatgtttattctacaatctgaacatcgattcctaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaaacctaacccccaa 29797516  T
Q  118 ttcccaatttcaactagaactatgctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttaccttaattca 207  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  29797517 ttcccaatttcagctagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttacctgaattca 29797606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 29801236 - 29801425
Alignment:
Q  19 tatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaa-acctaacccccaa 117  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29801236 tatgtttattctacaatctgaacatcgattcctaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaaacctaacccccaa 29801335  T
Q  118 ttcccaatttcaactagaactatgctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttaccttaattca 207  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  29801336 ttcccaatttcagctagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttacctgaattca 29801425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 14105614 - 14105450
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 117  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||| |||| |||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  14105614 ctatgattattctacaacctgaacatcaattcttaacacaattgccatggtttccacacttttcaatccaagaatcatactcccaaaacctaacccccaa 14105515  T
Q  118 ttcccaatttcaactagaactatgctaaatcaaaatcagaattatataactattatcattgagag 182  Q
    |||||||||||| |||||||||| ||||| |||||| ||||||||||||| ||||||||||||||    
T  14105514 ttcccaatttcagctagaactattctaaaccaaaattagaattatataaccattatcattgagag 14105450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 14415631 - 14415467
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 117  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||| |||| |||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  14415631 ctatgattattctacaacctgaacatcaattcttaacacaattgccatggtttccacacttttcaatccaagaatcatactcccaaaacctaacccccaa 14415532  T
Q  118 ttcccaatttcaactagaactatgctaaatcaaaatcagaattatataactattatcattgagag 182  Q
    |||||||||||| |||||||||| ||||| |||||| ||||||||||||| ||||||||||||||    
T  14415531 ttcccaatttcagctagaactattctaaaccaaaattagaattatataaccattatcattgagag 14415467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 17505151 - 17505043
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 117  Q
    ||||| ||||||||| | ||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17505151 ctatgattattctaccacctgaacatcaattcttaacacaattgccatggtttctacacttttcaatccaagaatcatactcccaaaacctaacccccaa 17505052  T
Q  118 ttcccaatt 126  Q
    |||||||||    
T  17505051 ttcccaatt 17505043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 17548063 - 17548171
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 117  Q
    ||||| ||||||||| | ||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17548063 ctatgattattctaccacctgaacatcaattcttaacacaattgccatggtttctacacttttcaatccaagaatcatactcccaaaacctaacccccaa 17548162  T
Q  118 ttcccaatt 126  Q
    |||||||||    
T  17548163 ttcccaatt 17548171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 69 - 201
Target Start/End: Complemental strand, 12207823 - 12207693
Alignment:
Q  69 ttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataact 168  Q
    ||||||||| || ||| ||| || |||||||  ||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||| || |||     
T  12207823 ttctacactctttaattcaaaaagcatactc--aaaacctaacccccaattcccaatttcaactagaaccttgctaaaccaaaatcagaattgtacaacc 12207726  T
Q  169 attatcattgagagatagtctcacccttacctt 201  Q
    |||||||||||||| ||||||||||||||||||    
T  12207725 attatcattgagagttagtctcacccttacctt 12207693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 69 - 201
Target Start/End: Complemental strand, 12201218 - 12201088
Alignment:
Q  69 ttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataact 168  Q
    ||||||||| || |||  || ||||||||||  |||||||||||||||||||||||||||||||||||   ||||||| ||||||||||||| || ||||    
T  12201218 ttctacactctttaattgaaaaatcatactc--aaaacctaacccccaattcccaatttcaactagaatcttgctaaaccaaaatcagaattgtacaact 12201121  T
Q  169 attatcattgagagatagtctcacccttacctt 201  Q
    |||| ||||||||| ||||||||||||||||||    
T  12201120 attaccattgagagttagtctcacccttacctt 12201088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 110 - 201
Target Start/End: Original strand, 7530089 - 7530181
Alignment:
Q  110 acccccaattcccaatttcaactagaactat-gctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttacctt 201  Q
    |||||||||| |||| ||||||||||||| | |||||||||||||||||| |||| |||| ||||||||||||| ||||||||||||||||||    
T  7530089 acccccaatttccaaattcaactagaactcttgctaaatcaaaatcagaagtatacaactgttatcattgagagttagtctcacccttacctt 7530181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 16108045 - 16107969
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    |||||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  16108045 ctatgtttattctacaatctgaacatcgattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 16107969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 39994957 - 39994857
Alignment:
Q  102 aaaacctaacccccaattcccaatttcaactagaactat-gctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttacct 200  Q
    ||||||||||||| |||| |||| ||||||||||||  | | |||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||    
T  39994957 aaaacctaacccctaatttccaaattcaactagaacccttgttaaatcaaaatcagaagtatagaactattatcattgagagttagtctcacctttacct 39994858  T
Q  201 t 201  Q
    |    
T  39994857 t 39994857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 13864549 - 13864486
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13864549 ctatgattattatacaatctgaacatcaattcttaacacaattgtcatgatttctacacttttc 13864486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 202
Target Start/End: Complemental strand, 15727512 - 15727367
Alignment:
Q  58 attgtcatgatttctacacttttcaatccaagaatc-atactccaaaaacctaacccccaattcccaatttcaactagaac--tatgctaaatcaaaatc 154  Q
    ||||||||| ||||||||||||||||| ||| |||| ||| ||  ||||||||| || ||| |||||| || |||||||||  | || |||||||| |||    
T  15727512 attgtcatggtttctacacttttcaattcaaaaatctataatc--aaaacctaaacctcaaatcccaaatt-aactagaaccctttgttaaatcaacatc 15727416  T
Q  155 agaattatata-actattatcattgagagatagtctcacccttacctta 202  Q
    ||||||||||| ||||| ||||||||||| |||||||||||||||||||    
T  15727415 agaattatatagactataatcattgagagttagtctcacccttacctta 15727367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 11311077 - 11311126
Alignment:
Q  166 actattatcattgagagatagtctcacccttaccttaattcagaagaaaa 215  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11311077 actattattattgagagatagtctcacccttaccttaattcagaagaaaa 11311126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 4325961 - 4326020
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacact 77  Q
    ||||| ||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||    
T  4325961 ctatgattattctacaacctgaacatcaattcttaacacaattgtcatggtttctacact 4326020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 39431373 - 39431311
Alignment:
Q  19 tatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    |||| ||||||||||| ||||||||| |||||||||||||||| |||| ||||||||||||||    
T  39431373 tatgattattctacaacctgaacatcaattcttaacacaattgacatggtttctacacttttc 39431311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 23557404 - 23557461
Alignment:
Q  24 ttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||||||||| ||||||||| |||| |||||||||||||||| ||||||||||||||    
T  23557404 ttattctacaacctgaacatcaattcataacacaattgtcatggtttctacacttttc 23557461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 42042159 - 42042220
Alignment:
Q  144 aaatcaaaatcagaattatataactattatcattgagagatagtctcacccttaccttaatt 205  Q
    |||||||||||||||| ||| | |||| ||||||||||| ||||||||||||||||||||||    
T  42042159 aaatcaaaatcagaatcatacatctataatcattgagagttagtctcacccttaccttaatt 42042220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 13648147 - 13648223
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||| ||||||||||| || |||||| ||||||||||||||| | ||| ||||||||||||||||| ||| |||||    
T  13648147 ctatgattattctacaacctaaacatcaattcttaacacaattttgatggtttctacacttttcaattcaaaaatca 13648223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 44190403 - 44190340
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| ||||||||||| ||||||||| ||||||||| ||||||||||| ||||| ||||||||    
T  44190403 ctatgattattctacaacctgaacatcaattcttaactcaattgtcatgttttcttcacttttc 44190340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 13256558 - 13256743
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaat-catactccaaaaacctaaccccca 116  Q
    ||||| |||| ||||||  |||||||| |||||||||||||||   ||||||||||||||||||||| ||| |||  ||| ||  |||||||||  ||||    
T  13256558 ctatgattatcctacaacttgaacatcaattcttaacacaatttcgatgatttctacacttttcaattcaaaaataaataatc--aaaacctaa-tccca 13256654  T
Q  117 attcccaatttcaactagaa--ctatgctaaatcaaaatcagaattata-taactattatcattgagagatagtctcacccttacctta 202  Q
    |||||||| || ||| | ||  |  || ||||||||||||||||| | |  |||||| ||||||||||| ||| |||||||||||||||    
T  13256655 attcccaaatttaacaacaacccattgataaatcaaaatcagaatcaaacaaactataatcattgagagttagcctcacccttacctta 13256743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 15214541 - 15214603
Alignment:
Q  140 tgctaaatcaaaatcagaattatataa-ctattatcattgagagatagtctcacccttacctt 201  Q
    |||||||||||||||||||||||| || |||| ||||||||||| ||| ||||||||||||||    
T  15214541 tgctaaatcaaaatcagaattatacaaactataatcattgagagttagcctcacccttacctt 15214603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 14168702 - 14168645
Alignment:
Q  188 ctcacccttaccttaattcagaa-gaaaaatggacaacgatcggattcccttggctct 244  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||| |||||||||    
T  14168702 ctcacccttaccttaattcagaaggacaaatgcacaacgatcggattctcttggctct 14168645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 14172949 - 14172892
Alignment:
Q  188 ctcacccttaccttaattcagaa-gaaaaatggacaacgatcggattcccttggctct 244  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||| |||||||||    
T  14172949 ctcacccttaccttaattcagaaggacaaatgcacaacgatcggattctcttggctct 14172892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 18455769 - 18455712
Alignment:
Q  24 ttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||||||||| ||||||||| |||||||||||||||  |||| ||||||||||||||    
T  18455769 ttattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 18455712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 1856587 - 1856511
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||||||||||||||  |||||| || |||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  1856587 ctatgtttattctacagcctgaacttcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 1856511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 13917759 - 13917683
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||||||||||||||  |||||| || |||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  13917759 ctatgtttattctacagcctgaacttcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 13917683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 25926486 - 25926410
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||||||||||||||  |||||| || |||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  25926486 ctatgtttattctacagcctgaacttcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 25926410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 16462934 - 16462997
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||| |||  ||||||||| ||||    
T  16462934 ctatgattattctacaacctgaacatcaattcttaacacaattgccatcgtttctacacatttc 16462997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 13664877 - 13664915
Alignment:
Q  172 atcattgagagatagtctcacccttaccttaattcagaa 210  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  13664877 atcattgaaagatagtctcacccttaccttaattcagaa 13664915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 11382898 - 11382865
Alignment:
Q  175 attgagagatagtctcacccttaccttaattcag 208  Q
    ||||||||||||||||||||||||||||||||||    
T  11382898 attgagagatagtctcacccttaccttaattcag 11382865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 11389375 - 11389342
Alignment:
Q  175 attgagagatagtctcacccttaccttaattcag 208  Q
    ||||||||||||||||||||||||||||||||||    
T  11389375 attgagagatagtctcacccttaccttaattcag 11389342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 15168206 - 15168243
Alignment:
Q  178 gagagatagtctcacccttaccttaattcagaagaaaa 215  Q
    |||||||||||||||||||||||||||| |||||||||    
T  15168206 gagagatagtctcacccttaccttaatttagaagaaaa 15168243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 23556215 - 23556272
Alignment:
Q  24 ttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||||||||| || |||||| |||| |||||| ||||||||| ||||||||||||||    
T  23556215 ttattctacaaccttaacatcaattcataacacgattgtcatggtttctacacttttc 23556272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 10520799 - 10520871
Alignment:
Q  188 ctcacccttaccttaattcagaa-gaaaaatggacaacga-tcggattcccttggctctacttgctcttctct 258  Q
    ||||||||||||||||||||||| |||||||| ||| | | || | ||| |||||||||||||||||||||||    
T  10520799 ctcacccttaccttaattcagaaggaaaaatgcacagcaattcaggttcacttggctctacttgctcttctct 10520871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 14188480 - 14188404
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||| |||||||||||  |||||||| |||||||||||||||   ||| ||||||||| ||||||| ||| |||||    
T  14188480 ctatgattattctacaacttgaacatcaattcttaacacaatttcgatggtttctacacatttcaattcaaaaatca 14188404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 14249764 - 14249708
Alignment:
Q  107 ctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattata 163  Q
    |||| ||| |||||||||||| ||| ||||||||| |||| ||||||||||||||||    
T  14249764 ctaaacccaaattcccaattttaaccagaactatgttaaaccaaaatcagaattata 14249708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 207
Target Start/End: Original strand, 16009604 - 16009636
Alignment:
Q  175 attgagagatagtctcacccttaccttaattca 207  Q
    |||||||||||||||||||||||||||||||||    
T  16009604 attgagagatagtctcacccttaccttaattca 16009636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 37726905 - 37726841
Alignment:
Q  140 tgctaaatcaaaatcagaa-ttatataa-ctattatcattgagagatagtctcacccttacctta 202  Q
    ||||||||||| ||||||| |||||||| |||  ||||||||||| |||||||||||||||||||    
T  37726905 tgctaaatcaacatcagaagttatataatctaaaatcattgagagttagtctcacccttacctta 37726841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 46625987 - 46626031
Alignment:
Q  172 atcattgagagatagtctcacccttaccttaattcagaagaaaaa 216  Q
    ||||||||||| |||||||||||||| ||||||||||||| ||||    
T  46625987 atcattgagagttagtctcacccttatcttaattcagaaggaaaa 46626031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 13848972 - 13848909
Alignment:
Q  140 tgctaaatcaaaatcagaattatataa-ctattatcattgagagatagtctcacccttacctta 202  Q
    ||||||| || |||||||||||||||| |||| | ||||||||| ||| |||||||||||||||    
T  13848972 tgctaaaacagaatcagaattatataaactataaccattgagagttagcctcacccttacctta 13848909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 16574231 - 16574294
Alignment:
Q  140 tgctaaatcaaaatcagaattatataa-ctattatcattgagagatagtctcacccttacctta 202  Q
    ||||||| || |||||||||||||||| |||| | ||||||||| ||| |||||||||||||||    
T  16574231 tgctaaaacagaatcagaattatataaactataaccattgagagttagcctcacccttacctta 16574294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 16591431 - 16591368
Alignment:
Q  140 tgctaaatcaaaatcagaattatataa-ctattatcattgagagatagtctcacccttacctta 202  Q
    ||||||| || |||||||||||||||| |||| | ||||||||| ||| |||||||||||||||    
T  16591431 tgctaaaacagaatcagaattatataaactataaccattgagagttagcctcacccttacctta 16591368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 33405629 - 33405700
Alignment:
Q  188 ctcacccttaccttaattcagaa-gaaaaatggacaacgatcggattcccttggctctacttgctcttctct 258  Q
    |||||||||||||||||| |||| |||||||| ||| | || |||||| || || |||||||||||||||||    
T  33405629 ctcacccttaccttaatttagaatgaaaaatgcacagcaattggattctctgggttctacttgctcttctct 33405700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 11661981 - 11662047
Alignment:
Q  28 tctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||||| ||||||||| |||||||||||||||   ||| ||| ||||||||||||| ||| |||||    
T  11661981 tctacaacctgaacatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatca 11662047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 256
Target Start/End: Complemental strand, 11854572 - 11854502
Alignment:
Q  188 ctcacccttaccttaattcagaa-gaaaaatggacaacga-tcggattcccttggctctacttgctcttct 256  Q
    ||||||||||||||||||||||| |||||||| ||| | | || | ||| |||||||||||||||||||||    
T  11854572 ctcacccttaccttaattcagaaggaaaaatgcacagcaattcaggttcacttggctctacttgctcttct 11854502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 13679518 - 13679556
Alignment:
Q  172 atcattgagagatagtctcacccttaccttaattcagaa 210  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  13679518 atcattgaaagatagtctcacccttaccttatttcagaa 13679556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 34958547 - 34958613
Alignment:
Q  138 tatgctaaatcaaaatcagaa-ttatataact-attatcattgagagatagtctcacccttacctta 202  Q
    |||| |||||||||||||||| |||||||| | || || |||||||| |||||||||||||||||||    
T  34958547 tatgttaaatcaaaatcagaagttatataatttataattattgagagttagtctcacccttacctta 34958613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 21231004 - 21230960
Alignment:
Q  157 aattatataactattatcattgagagatagtctcacccttacctta 202  Q
    ||||||||| |||| || ||||||||||||||||||||||||||||    
T  21231004 aattatata-ctatgattattgagagatagtctcacccttacctta 21230960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 207
Target Start/End: Complemental strand, 10895818 - 10895786
Alignment:
Q  175 attgagagatagtctcacccttaccttaattca 207  Q
    |||||||||||||||||||||||| ||||||||    
T  10895818 attgagagatagtctcacccttacgttaattca 10895786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 14265234 - 14265178
Alignment:
Q  107 ctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattata 163  Q
    |||| ||| |||||||||||| ||| ||||||||| ||||  |||||||||||||||    
T  14265234 ctaaacccaaattcccaattttaaccagaactatgttaaactaaaatcagaattata 14265178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 207
Target Start/End: Original strand, 16677323 - 16677355
Alignment:
Q  175 attgagagatagtctcacccttaccttaattca 207  Q
    |||||||||||||||||||||||||| ||||||    
T  16677323 attgagagatagtctcacccttacctgaattca 16677355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 207
Target Start/End: Original strand, 17651559 - 17651591
Alignment:
Q  175 attgagagatagtctcacccttaccttaattca 207  Q
    |||||||||||||||||||||||||| ||||||    
T  17651559 attgagagatagtctcacccttacctgaattca 17651591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 216; Significance: 1e-119; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 19 - 258
Target Start/End: Complemental strand, 37804258 - 37804020
Alignment:
Q  19 tatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaat 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37804258 tatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaat 37804159  T
Q  119 tcccaatttcaactagaactatgctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttaccttaattcagaagaaaaatg 218  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  37804158 tcccaatttctactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcgcccttaccttaattcagaagaaaaatg 37804059  T
Q  219 gacaacgatcggattcccttggctctacttgctcttctct 258  Q
     ||||||||| |||||||||||||||||||||||||||||    
T  37804058 cacaacgatc-gattcccttggctctacttgctcttctct 37804020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 41875779 - 41875539
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 117  Q
    ||||| |||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41875779 ctatgattattctacagtctgaacatcgattcttaacacaattgccatggtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 41875680  T
Q  118 ttcccaatttcaactagaactatgctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttaccttaattcagaagaaaaat 217  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  41875679 ttcccaatttcaactagaactatgctaaaccaaaatcagaattatataaccattatcaatgagagagagtctcacccttaccttaattcagaagaaaaat 41875580  T
Q  218 ggacaacgatcggattcccttggctctacttgctcttctct 258  Q
    | |||||||||||||||||||||||||||||||||||||||    
T  41875579 gcacaacgatcggattcccttggctctacttgctcttctct 41875539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 9776971 - 9777160
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 117  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9776971 ctatgtttattctacaatctgaacatcgattcttaacataattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 9777070  T
Q  118 ttcccaatttcaactagaactatgctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttaccttaattca 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  9777071 ttcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttacctgaattca 9777160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 28370082 - 28369999
Alignment:
Q  175 attgagagatagtctcacccttaccttaattcagaagaaaaatggacaacgatcggattcccttggctctacttgctcttctct 258  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  28370082 attgagagatagtctcacccttaccttaattcagaagaaaaatgcacaacgatcagattcccttggctctacttgctcttctct 28369999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 60 - 201
Target Start/End: Original strand, 7786090 - 7786229
Alignment:
Q  60 tgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaat 159  Q
    |||||||  ||||||||| || ||| ||| ||||||||||  ||||||||||||||||||||||||||||||| ||||  ||||||| |||||| |||||    
T  7786090 tgtcatggattctacactctttaattcaaaaatcatactc--aaaacctaacccccaattcccaatttcaactggaaccctgctaaaccaaaattagaat 7786187  T
Q  160 tatataactattatcattgagagatagtctcacccttacctt 201  Q
    | |||||| |||||||||||||| ||||||||||||||||||    
T  7786188 tgtataaccattatcattgagagttagtctcacccttacctt 7786229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 175 - 258
Target Start/End: Original strand, 19512414 - 19512496
Alignment:
Q  175 attgagagatagtctcacccttaccttaattcagaagaaaaatggacaacgatcggattcccttggctctacttgctcttctct 258  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||    
T  19512414 attgagagatagtctcacccttaccttaattcagaag-aaaatgcacaacgatcagattcccttggctctacttgctcttctct 19512496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 26707287 - 26707423
Alignment:
Q  63 catgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattat 162  Q
    ||||| || |||||| || ||| ||| ||||||||||  |||||||||| |||||||||||||||||||||||||  ||||||| |||||||||| || |    
T  26707287 catgaattttacactatttaattcaaaaatcatactc--aaaacctaactcccaattcccaatttcaactagaaccttgctaaaccaaaatcagagttgt 26707384  T
Q  163 ataactattatcattgagagatagtctcacccttacctt 201  Q
    ||||| |||| ||||||||| ||||||||||||||||||    
T  26707385 ataaccattaccattgagagttagtctcacccttacctt 26707423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 26977021 - 26977157
Alignment:
Q  63 catgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattat 162  Q
    ||||| || |||||| || ||| ||| ||||||||||  |||||||||| |||||||||||||||||||||||||  ||||||| |||||||||| || |    
T  26977021 catgaattttacactatttaattcaaaaatcatactc--aaaacctaactcccaattcccaatttcaactagaaccttgctaaaccaaaatcagagttgt 26977118  T
Q  163 ataactattatcattgagagatagtctcacccttacctt 201  Q
    ||||| |||| ||||||||| ||||||||||||||||||    
T  26977119 ataaccattaccattgagagttagtctcacccttacctt 26977157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 107 - 202
Target Start/End: Complemental strand, 17022010 - 17021914
Alignment:
Q  107 ctaacccccaattcccaatttcaactagaactatgctaaatc-aaaatcagaattatataactattatcattgagagatagtctcacccttacctta 202  Q
    |||| ||| |||||||||||| ||| |||||||||||||||| ||||||||||||||| ||| ||||  ||||||||||||||||||||||||||||    
T  17022010 ctaaacccaaattcccaattttaaccagaactatgctaaatccaaaatcagaattatacaaccattactattgagagatagtctcacccttacctta 17021914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 23560755 - 23560689
Alignment:
Q  188 ctcacccttaccttaattcagaagaaaaatggacaacgatcggattcccttggctctacttgctctt 254  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||    
T  23560755 ctcacccttacattaattcagaagaaaaatgcacaacgatcggattcgcttggctcaacttgctctt 23560689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 202
Target Start/End: Complemental strand, 21553541 - 21553390
Alignment:
Q  51 taacacaattgtcatgatttctacacttttcaatccaagaatca-tactccaaaaacctaacccccaattcccaatttcaactagaacta--tgctaaat 147  Q
    |||||||||||||||| ||||||||||||||||| ||| ||||| |  ||  ||||||||| ||| |||||||||||| ||| |||||    |||||||     
T  21553541 taacacaattgtcatggtttctacacttttcaattcaaaaatcaatgatc--aaaacctaaaccc-aattcccaattt-aaccagaaccccttgctaaaa 21553446  T
Q  148 caaaatcagaattatata-actattatcattgagagatagtctcacccttacctta 202  Q
    |||||||||||||||||| ||||| | ||||||||| ||| |||||||||||||||    
T  21553445 caaaatcagaattatatagactataaccattgagagttagcctcacccttacctta 21553390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 18419317 - 18419393
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  18419317 ctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 18419393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 27868761 - 27868685
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  27868761 ctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 27868685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 33472750 - 33472674
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  33472750 ctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 33472674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 36461032 - 36461095
Alignment:
Q  140 tgctaaatcaaaatcagaattatataa-ctattatcattgagagatagtctcacccttacctta 202  Q
    |||||||||||||||||||||||| || |||| ||||||||||| ||| |||||||||||||||    
T  36461032 tgctaaatcaaaatcagaattatacaaactataatcattgagagttagcctcacccttacctta 36461095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 201
Target Start/End: Original strand, 17813468 - 17813533
Alignment:
Q  138 tatgctaaatcaaaatcagaa-ttatataa-ctattatcattgagagatagtctcacccttacctt 201  Q
    |||| |||||||||||||||| |||||||| |||| ||||||||||| ||||||||||||||||||    
T  17813468 tatgttaaatcaaaatcagaagttatataatctataatcattgagagttagtctcacccttacctt 17813533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 18407971 - 18407936
Alignment:
Q  175 attgagagatagtctcacccttaccttaattcagaa 210  Q
    ||||||||||||||||||||||||||||||||||||    
T  18407971 attgagagatagtctcacccttaccttaattcagaa 18407936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 6766749 - 6766811
Alignment:
Q  143 taaatcaaaatcagaa-ttatataa-ctattatcattgagagatagtctcacccttaccttaa 203  Q
    ||||||||||| |||| |||||||| |||| ||||||||||| ||||||||||||||||||||    
T  6766749 taaatcaaaataagaagttatataatctataatcattgagagttagtctcacccttaccttaa 6766811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 20844050 - 20844120
Alignment:
Q  188 ctcacccttaccttaattcagaagaaaaatggacaacga-tcggattcccttggctctacttgctcttctc 257  Q
    ||||| ||||||||||||||||||||||||| ||| | | || | ||| ||||||||||||||||||||||    
T  20844050 ctcactcttaccttaattcagaagaaaaatgcacatcaattcaggttcacttggctctacttgctcttctc 20844120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 23111244 - 23111167
Alignment:
Q  157 aattatataactattatcattgagagatagtctcacccttaccttaattcagaagaa-aaatggacaacgatcggattc 234  Q
    ||||||||| |||| || ||||||||||||||||||||||||||||||| ||| ||| ||| | ||||| |||||||||    
T  23111244 aattatata-ctatgattattgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatcggattc 23111167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 19363549 - 19363621
Alignment:
Q  188 ctcacccttaccttaattcagaagaa-aaatggacaacgat-cggattcccttggctctacttgctcttctct 258  Q
    |||||| ||||||||||||||||| | ||||| ||| | || ||||||||||||| |||||||||||||||||    
T  19363549 ctcaccgttaccttaattcagaagcacaaatgcacagcaattcggattcccttggttctacttgctcttctct 19363621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 21830520 - 21830588
Alignment:
Q  187 tctcacccttaccttaattcag-aagaaaaatggacaacgatcggattcccttggctctacttgctctt 254  Q
    |||||||||||||||||||||| |||| ||||| ||| | ||  ||||| |||||||||||||||||||    
T  21830520 tctcacccttaccttaattcagaaagacaaatgcacatcaatttgattctcttggctctacttgctctt 21830588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 21980127 - 21980067
Alignment:
Q  143 taaatcaaaatcagaattatataa-ctattatcattgagagatagtctcacccttacctta 202  Q
    ||||||||||||||||||||| || |||| ||||||||||| | | |||||||||||||||    
T  21980127 taaatcaaaatcagaattatacaaactataatcattgagagttggcctcacccttacctta 21980067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 22508484 - 22508556
Alignment:
Q  188 ctcacccttaccttaattcagaa-gaaaaatggacaacgatcggattccctt-ggctctacttgctcttctct 258  Q
    ||||||||||||||||||||||| |||||||| ||||| |  |||||| ||| || |||||||||||||||||    
T  22508484 ctcacccttaccttaattcagaatgaaaaatgcacaacaaaaggattctcttgggttctacttgctcttctct 22508556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 22412952 - 22413015
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| |||||||||||  | |||||| |||||||||||||||  |||| ||||||||||||||    
T  22412952 ctatgattattctacaacataaacatcaattcttaacacaattaccatggtttctacacttttc 22413015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 22501903 - 22501975
Alignment:
Q  188 ctcacccttaccttaattcagaa-gaaaaatggacaacgatcggattccctt-ggctctacttgctcttctct 258  Q
    ||||||||||||||||||||||| |||||||| ||| | |  |||||| ||| || |||||||||||||||||    
T  22501903 ctcacccttaccttaattcagaatgaaaaatgcacagcaaaaggattctcttgggttctacttgctcttctct 22501975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 24276563 - 24276499
Alignment:
Q  140 tgctaaatcaaaatcagaatt-atataa-ctattatcattgagagatagtctcacccttacctta 202  Q
    ||||||||||| ||||||||| |||||| |||  ||||||||||| ||| |||||||||||||||    
T  24276563 tgctaaatcaacatcagaatttatataaactagaatcattgagagttagcctcacccttacctta 24276499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 24385650 - 24385714
Alignment:
Q  140 tgctaaatcaaaatcagaatt-atataa-ctattatcattgagagatagtctcacccttacctta 202  Q
    ||||||||||| ||||||||| |||||| |||  ||||||||||| ||| |||||||||||||||    
T  24385650 tgctaaatcaacatcagaatttatataaactagaatcattgagagttagcctcacccttacctta 24385714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 213; Significance: 1e-117; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 12942995 - 12943235
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 117  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12942995 ctatatttattctacaatctgaacatcgattcttaacacaattgccatcgtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 12943094  T
Q  118 ttcccaatttcaactagaactatgctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttaccttaattcagaagaaaaat 217  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12943095 ttcccaatttcaactagaactatgctaaaccaaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaattcagaagaaaaat 12943194  T
Q  218 ggacaacgatcggattcccttggctctacttgctcttctct 258  Q
    | |||||||||||||||||||||||||||||||||||||||    
T  12943195 gcacaacgatcggattcccttggctctacttgctcttctct 12943235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 18 - 202
Target Start/End: Complemental strand, 28288693 - 28288510
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  28288693 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaa-cctaacccccaa 28288595  T
Q  118 ttcccaatttcaactagaactatgctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttacctta 202  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28288594 ttcccaatttcaactagaactatgctaaaccaaaatcagaattatataaccattatcattgagagatagtctcacccttacctta 28288510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 51 - 201
Target Start/End: Complemental strand, 9185150 - 9184999
Alignment:
Q  51 taacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattccc-aatttcaactagaactatgctaaatca 149  Q
    |||||| | |||||||  |||||||||||| ||| ||| ||||||||||||||| ||||||| | |||| || |||||||||||||||  ||||||| ||    
T  9185150 taacactaatgtcatggattctacactttttaattcaaaaatcatactccaaaa-cctaacctctaatttcctaatttcaactagaaccttgctaaacca 9185052  T
Q  150 aaatcagaa-ttatataactattatcattgagagatagtctcacccttacctt 201  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  9185051 aaatcagaaattatataaccattatcattgagagatagtctcacccttacctt 9184999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 18138497 - 18138596
Alignment:
Q  102 aaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaa-tcagaattatataactattatcattgagagatagtctcacccttacct 200  Q
    ||||||||||||| ||||| ||||||||||| ||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  18138497 aaaacctaacccc-aattctcaatttcaactggaactatgctaaaccaaaaatcagaattatataaccattatcattgagagatagtctcacctttacct 18138595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 258
Target Start/End: Original strand, 25397198 - 25397284
Alignment:
Q  172 atcattgagagatagtctcacccttaccttaattcagaagaaaaatggacaacgatcggattcccttggctctacttgctcttctct 258  Q
    ||||| ||||| ||| ||||||||||||||||||||||||||||| | |||||||||||||||  || |||||||||||||||||||    
T  25397198 atcatcgagagttagcctcacccttaccttaattcagaagaaaaacgcacaacgatcggattcttttagctctacttgctcttctct 25397284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 202
Target Start/End: Original strand, 1588649 - 1588794
Alignment:
Q  58 attgtcatgatttctacacttttcaatccaagaatc-atactccaaaaacctaacccccaattcccaatttcaactagaac--tatgctaaatcaaaatc 154  Q
    ||||||||| ||||||||||||||||| ||| |||| ||| ||  ||||||||| || ||| |||||| || |||||||||  | || |||||||| |||    
T  1588649 attgtcatggtttctacacttttcaattcaaaaatctataatc--aaaacctaaacctcaaatcccaaatt-aactagaaccctttgttaaatcaacatc 1588745  T
Q  155 agaattatata-actattatcattgagagatagtctcacccttacctta 202  Q
    ||||||||||| ||||| ||||||||||| |||||||||||||||||||    
T  1588746 agaattatatagactataatcattgagagttagtctcacccttacctta 1588794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 25348506 - 25348555
Alignment:
Q  166 actattatcattgagagatagtctcacccttaccttaattcagaagaaaa 215  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25348506 actattattattgagagatagtctcacccttaccttaattcagaagaaaa 25348555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 1341 - 1411
Alignment:
Q  140 tgctaaatcaaaatcagaattatataa-ctattatcattgagagatagtctcacccttaccttaattcaga 209  Q
    |||||||||||||||||||||||| || |||| ||||||||||| ||  ||||||||||||||||||||||    
T  1341 tgctaaatcaaaatcagaattatacaaactataatcattgagagttaacctcacccttaccttaattcaga 1411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 8300 - 8370
Alignment:
Q  140 tgctaaatcaaaatcagaattatataa-ctattatcattgagagatagtctcacccttaccttaattcaga 209  Q
    |||||||||||||||||||||||| || |||| ||||||||||| ||  ||||||||||||||||||||||    
T  8300 tgctaaatcaaaatcagaattatacaaactataatcattgagagttaacctcacccttaccttaattcaga 8370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 209
Target Start/End: Original strand, 21470738 - 21470832
Alignment:
Q  116 aattcccaatttcaactagaactatgctaaatc-aaaatcagaattatataactattatcattgagagatagtctcacccttaccttaattcaga 209  Q
    ||||||||||||| || |||||||||||||| | ||||||| ||||||||||  ||||   |||| ||||||||||||| |||||||||||||||    
T  21470738 aattcccaatttctaccagaactatgctaaacccaaaatcaaaattatataatcattaatgttgaaagatagtctcaccattaccttaattcaga 21470832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 13765212 - 13765288
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  13765212 ctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 13765288  T

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Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 23226044 - 23225968
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  23226044 ctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 23225968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 23956728 - 23956804
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  23956728 ctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 23956804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 1254820 - 1254883
Alignment:
Q  140 tgctaaatcaaaatcagaattatataa-ctattatcattgagagatagtctcacccttacctta 202  Q
    |||||||||||||||||||||||| || |||| ||||||||||| ||| |||||||||||||||    
T  1254820 tgctaaatcaaaatcagaattatacaaactataatcattgagagttagcctcacccttacctta 1254883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 10582570 - 10582500
Alignment:
Q  188 ctcacccttaccttaattcagaagaaaaatggacaacga-tcggattcccttggctctacttgctcttctct 258  Q
    ||||||||||||||||||||||||||||||| ||||| | |||| || |||||||||||||| |||||||||    
T  10582570 ctcacccttaccttaattcagaagaaaaatgcacaacaattcgggtt-ccttggctctactttctcttctct 10582500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 14978728 - 14978665
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||  |||| ||||||||||||||    
T  14978728 ctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 14978665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 20556219 - 20556156
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||  |||| ||||||||||||||    
T  20556219 ctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 20556156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 209
Target Start/End: Original strand, 21477271 - 21477332
Alignment:
Q  148 caaaatcagaattatataactattatcattgagagatagtctcacccttaccttaattcaga 209  Q
    |||||||||||||||||||  ||||   |||| |||||||||||||||||||||||||||||    
T  21477271 caaaatcagaattatataatcattaatgttgaaagatagtctcacccttaccttaattcaga 21477332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 256
Target Start/End: Complemental strand, 23232579 - 23232510
Alignment:
Q  188 ctcacccttaccttaattcagaa-gaaaaatggacaacgatcggattcccttggctctacttgctcttct 256  Q
    ||||||||||||||||||||||| || ||||| ||||| ||  ||||| |||||||||||||||||||||    
T  23232579 ctcacccttaccttaattcagaaagacaaatgcacaacaatttgattctcttggctctacttgctcttct 23232510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 25619084 - 25619023
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttt 79  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||  |||| ||||||||||||    
T  25619084 ctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttt 25619023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 25773516 - 25773607
Alignment:
Q  116 aattcccaatttcaactagaactatgctaaatc--aaaatcagaattatataactattatcattgagagatagtctcacccttaccttaatt 205  Q
    ||||||||||||| || |||||||||||||| |  ||||||||| ||||||||  ||||   |||| |||||||||||| ||||||||||||    
T  25773516 aattcccaatttctaccagaactatgctaaacccaaaaatcagacttatataatcattaatgttgaaagatagtctcactcttaccttaatt 25773607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 611665 - 611728
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| ||||||||| | ||||||||  |||| |||||||||||||||| ||||||||||||||    
T  611665 ctatgattattctaccacctgaacattaattcctaacacaattgtcatggtttctacacttttc 611728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 210
Target Start/End: Original strand, 9187523 - 9187558
Alignment:
Q  175 attgagagatagtctcacccttaccttaattcagaa 210  Q
    ||||||||||||||||||||||||||||||||||||    
T  9187523 attgagagatagtctcacccttaccttaattcagaa 9187558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 34296256 - 34296193
Alignment:
Q  140 tgctaaatcaaaatcagaattata-taactattatcattgagagatagtctcacccttacctta 202  Q
    ||||||||||||||||||||||||  |||||| ||||||||||| ||  |||||||||||||||    
T  34296256 tgctaaatcaaaatcagaattatacaaactataatcattgagagttaacctcacccttacctta 34296193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 31021908 - 31021842
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaat 84  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||   ||  |||||||||||||||||    
T  31021908 ctatgattattctacaacctgaacatcaattcttaacacaatttcgatagtttctacacttttcaat 31021842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 18787097 - 18787154
Alignment:
Q  188 ctcacccttaccttaattcagaa-gaaaaatggacaacgatcggattcccttggctct 244  Q
    ||||||||||||||||||||||| |||||||| ||||| || |||||| |||||||||    
T  18787097 ctcacccttaccttaattcagaaggaaaaatgcacaacaattggattctcttggctct 18787154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 23057969 - 23058006
Alignment:
Q  178 gagagatagtctcacccttaccttaattcagaagaaaa 215  Q
    |||||||||||||||||||||||||||| |||||||||    
T  23057969 gagagatagtctcacccttaccttaatttagaagaaaa 23058006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 1639946 - 1640010
Alignment:
Q  140 tgctaaatcaaaatcagaatt-atataa-ctattatcattgagagatagtctcacccttacctta 202  Q
    ||||||||||| ||||||||| |||||| |||| ||||||||||| ||| |||||||||||||||    
T  1639946 tgctaaatcaatatcagaatttatataaactataatcattgagagttagcctcacccttacctta 1640010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 207
Target Start/End: Original strand, 4477885 - 4477917
Alignment:
Q  175 attgagagatagtctcacccttaccttaattca 207  Q
    |||||||||||||||||||||||||||||||||    
T  4477885 attgagagatagtctcacccttaccttaattca 4477917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 23415770 - 23415846
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||||||||||||||  |||||| || |||||||||||||||   ||| ||||||| ||||||||| ||| |||||    
T  23415770 ctatgtttattctacagcctgaacttcaattcttaacacaatttcgatggtttctacgcttttcaattcaaaaatca 23415846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 23839226 - 23839286
Alignment:
Q  175 attgagagatagtctcacccttaccttaattcagaagaa-aaatggacaacgatcggattc 234  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||| | ||||| |||||||||    
T  23839226 attgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatcggattc 23839286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 27557528 - 27557604
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||||||||||||||| |||||| || ||| |||||||||||    || ||||||||||||||||| ||| |||||    
T  27557528 ctatgtttattctacaacctgaacttcaattattaacacaatttcgttggtttctacacttttcaattcaaaaatca 27557604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 15816725 - 15816661
Alignment:
Q  140 tgctaaatcaaaatcagaa-ttatataa-ctattatcattgagagatagtctcacccttacctta 202  Q
    ||||||||||| ||||||| |||||||| | |  ||||||||||| |||||||||||||||||||    
T  15816725 tgctaaatcaacatcagaagttatataatcgaaaatcattgagagttagtctcacccttacctta 15816661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 18659448 - 18659488
Alignment:
Q  166 actattatcattgagagatagtctcacccttaccttaattc 206  Q
    ||||| || |||||||| |||||||||||||||||||||||    
T  18659448 actatgattattgagagttagtctcacccttaccttaattc 18659488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 181; Significance: 7e-98; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 15534988 - 15535176
Alignment:
Q  19 tatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaat 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15534988 tatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaat 15535087  T
Q  119 tcccaatttcaactagaactatgctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttaccttaattca 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  15535088 tcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttacctgaattca 15535176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 36038676 - 36038865
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36038676 ctatgtttattctacaatctgaacatcgattcttaacacaattgccatcgtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 36038775  T
Q  118 ttcccaatttcaactagaactatgctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttaccttaattca 207  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||    
T  36038776 ttcccaatttcaactagaactatgctaaaccaaaatcagaattatataaccattaccattgagagatagtctcacccttacctgaattca 36038865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 18 - 200
Target Start/End: Complemental strand, 49547130 - 49546949
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  49547130 ctatgtttattctacaatctgaacatcgattcttaacacaattgccatggtttctacacttttcaatccaaga-tcgtactccaaaaacctaacccccaa 49547032  T
Q  118 ttcccaatttcaactagaactatgctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttacct 200  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  49547031 ttcccaatttcaactagaactatgctaaaccaagatcagaattatataaccattatcattgagagatagtctcacccttacct 49546949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 33849608 - 33849716
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 117  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  33849608 ctatgtttattctacaacatgaacatcgattcttaacacaattgtcatggtttctacacttttcaattcaagaatcatactcccaaaacctaacccccaa 33849707  T
Q  118 ttcccaatt 126  Q
    |||||||||    
T  33849708 ttcccaatt 33849716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 16277474 - 16277366
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 117  Q
    ||||| ||||||||| | ||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16277474 ctatgattattctaccacctgaacatcaattcttaacacaattgccatggtttctacacttttcaatccaagaatcatactcccaaaacctaacccccaa 16277375  T
Q  118 ttcccaatt 126  Q
    |||||||||    
T  16277374 ttcccaatt 16277366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 53387084 - 53386976
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 117  Q
    ||||| ||||||||| | ||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  53387084 ctatgattattctaccacctgaacatcaattcttaacacaattgccatggtttctacacttttcaatccaagaatcatactcccaaaacctaacccccaa 53386985  T
Q  118 ttcccaatt 126  Q
    |||||||||    
T  53386984 ttcccaatt 53386976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 69 - 201
Target Start/End: Original strand, 32490662 - 32490792
Alignment:
Q  69 ttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataact 168  Q
    ||||||||| || ||| ||| ||||||||||  ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||     
T  32490662 ttctacactctttaattcaaaaatcatactc--aaaacctaacccccaattcccaatttcaactagaaccttgctaaatcaaaatcagaattgtataacc 32490759  T
Q  169 attatcattgagagatagtctcacccttacctt 201  Q
    ||||  |||||||| ||||||||||||||||||    
T  32490760 attactattgagagttagtctcacccttacctt 32490792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 51 - 201
Target Start/End: Complemental strand, 15416031 - 15415882
Alignment:
Q  51 taacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactat-gctaaatca 149  Q
    |||||| |||| ||||  |||||||||||||||| ||| ||||||| ||  |||||||||||||||| |||||| ||||||||||||  | |||||||||    
T  15416031 taacactattgccatggattctacacttttcaattcaaaaatcataatc--aaaacctaacccccaaatcccaaattcaactagaacccttgctaaatca 15415934  T
Q  150 aaatcagaattatataactattatcattgagagatagtctcacccttacctt 201  Q
    ||||||||| |||| |||||||||||||||||| ||||||||||||||||||    
T  15415933 aaatcagaagtatagaactattatcattgagagttagtctcacccttacctt 15415882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 51 - 201
Target Start/End: Complemental strand, 16370872 - 16370724
Alignment:
Q  51 taacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactat-gctaaatca 149  Q
    |||||| |||| |||  |||||||||| |||||| ||| ||||||| ||  |||||||||||||||||| |||| ||||||||||||  | |||||||||    
T  16370872 taacaccattgccatagtttctacactcttcaattcaaaaatcataatc--aaaacctaacccccaatttccaaattcaactagaacccttgctaaatca 16370775  T
Q  150 aaatcagaattatataactattatcattgagagatagtctcacccttacctt 201  Q
    ||||||||| |||| | |||||||||||||||| ||||||||||||||||||    
T  16370774 aaatcagaagtataca-ctattatcattgagagttagtctcacccttacctt 16370724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 80 - 201
Target Start/End: Original strand, 15318849 - 15318969
Alignment:
Q  80 tcaatccaagaatcatactccaaaaacctaacccccaa-ttcccaatttcaactagaactatgctaaatcaaaatcagaattatataactattatcattg 178  Q
    ||||||||| |||||||||   | |||||||||| ||| ||||||||||||||||||||| || |||||||||||||||||| || ||| | ||||||||    
T  15318849 tcaatccaaaaatcatactt--agaacctaacccgcaaattcccaatttcaactagaactttgttaaatcaaaatcagaattgtagaaccaatatcattg 15318946  T
Q  179 agagatagtctcacccttacctt 201  Q
    |||||||||||||||||||||||    
T  15318947 agagatagtctcacccttacctt 15318969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 15076323 - 15076414
Alignment:
Q  116 aattcccaatttcaactagaactatgctaaatc--aaaatcagaattatataactattatcattgagagatagtctcacccttaccttaatt 205  Q
    |||||| |||||| |||||||||||||||||||  ||||||||||||| ||||| || || |||||||||||||||||||||||||||||||    
T  15076323 aattccaaatttctactagaactatgctaaatccaaaaatcagaattacataaccatcattattgagagatagtctcacccttaccttaatt 15076414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 188 - 257
Target Start/End: Complemental strand, 18165447 - 18165378
Alignment:
Q  188 ctcacccttaccttaattcagaagaaaaatggacaacgatcggattcccttggctctacttgctcttctc 257  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||| ||||||||    
T  18165447 ctcacccttaccttaatccagaagaaaaatgcacaacgatcggattcgcttggctctacttactcttctc 18165378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 15344800 - 15344863
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  15344800 ctatgattattctacaacctgaacatcaattcttaacacaattgtcatgatttctacacttttc 15344863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 18230606 - 18230791
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatc-atactccaaaaacctaaccccca 116  Q
    ||||| |||| |||||| ||||||||| |||||||||||||||   ||||||||||||||||||||| ||| |||| ||| ||  |||||||||  ||||    
T  18230606 ctatgattatcctacaacctgaacatcaattcttaacacaatttcgatgatttctacacttttcaattcaaaaatcaataatc--aaaacctaa-tccca 18230702  T
Q  117 attcccaatttcaactagaa--ctatgctaaatcaaaatcagaattata-taactattatcattgagagatagtctcacccttacctta 202  Q
    |||||||| || ||| | ||  |  || ||||||||||||||||| |||  |||||| ||||||||||| ||| |||||||||||||||    
T  18230703 attcccaaatttaaccacaaccccttgttaaatcaaaatcagaatcatacaaactataatcattgagagttagcctcacccttacctta 18230791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 205
Target Start/End: Original strand, 15069727 - 15069814
Alignment:
Q  120 cccaatttcaactagaactatgctaaatc--aaaatcagaattatataactattatcattgagagatagtctcacccttaccttaatt 205  Q
    ||||||||| |||| |||||||||||| |  ||||||||||||| ||||| || || |||||||||||||||||||||||||||||||    
T  15069727 cccaatttctactataactatgctaaacccaaaaatcagaattacataaccatcattattgagagatagtctcacccttaccttaatt 15069814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 12611776 - 12611839
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| ||||||||||| ||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  12611776 ctatgattattctacaacctgaacatcaattcttaacacaattatcatggtttctacacttttc 12611839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 15447564 - 15447501
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| ||||||||||| ||||||||| ||||||||||||||||||||| ||||| ||||||||    
T  15447564 ctatgattattctacaacctgaacatcaattcttaacacaattgtcatggtttctgcacttttc 15447501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 51463215 - 51463152
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| ||||||||||| ||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  51463215 ctatgattattctacaacctgaacatcaattcttaacacaattatcatggtttctacacttttc 51463152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 28386109 - 28386185
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  28386109 ctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 28386185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 23802591 - 23802528
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||  |||| ||||||||||||||    
T  23802591 ctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 23802528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 56114825 - 56114762
Alignment:
Q  140 tgctaaatcaaaatcagaattatataa-ctattatcattgagagatagtctcacccttacctta 202  Q
    |||||||||||||||||||||||| || |||| ||||||||||| ||| |||||||||||||||    
T  56114825 tgctaaatcaaaatcagaattatacaaactataatcattgagagttagcctcacccttacctta 56114762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 17177369 - 17177426
Alignment:
Q  188 ctcacccttaccttaattcagaa-gaaaaatggacaacgatcggattcccttggctct 244  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||| |||||||||    
T  17177369 ctcacccttaccttaattcagaaagacaaatgcacaacgatcggattctcttggctct 17177426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 14035731 - 14035795
Alignment:
Q  140 tgctaaatcaaaatcagaa-ttatataa-ctattatcattgagagatagtctcacccttacctta 202  Q
    ||||||||||| ||||||| |||||||| |||| ||||||||||| |||||||||||||||||||    
T  14035731 tgctaaatcaacatcagaagttatataatctataatcattgagagttagtctcacccttacctta 14035795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 24046543 - 24046480
Alignment:
Q  140 tgctaaatcaaaatcagaattata-taactattatcattgagagatagtctcacccttacctta 202  Q
    ||||||||||||||||||||||||  |||||| ||||||||||| ||| ||||| |||||||||    
T  24046543 tgctaaatcaaaatcagaattatacaaactataatcattgagagttagcctcacacttacctta 24046480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 13043950 - 13043893
Alignment:
Q  24 ttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||||||||| ||||||||| |||||||||||||||   ||| ||||||||||||||    
T  13043950 ttattctacaacctgaacatcaattcttaacacaattactatggtttctacacttttc 13043893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 17143224 - 17143297
Alignment:
Q  138 tatgctaaatcaaaatcagaa-ttatataact-attatcattgagagatagtctcacccttaccttaattcaga 209  Q
    |||| ||||||||||||| || |||||||| | || || |||||||| ||||||||||||||||||||||||||    
T  17143224 tatgttaaatcaaaatcaaaagttatataatttataattattgagagttagtctcacccttaccttaattcaga 17143297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 53904507 - 53904435
Alignment:
Q  188 ctcacccttaccttaattcagaa-gaaaaatggacaacga-tcggattcccttggctctacttgctcttctct 258  Q
    ||||||||||||||||||||||| |||||||| ||| | | || | ||| |||||||||||||||||||||||    
T  53904507 ctcacccttaccttaattcagaaggaaaaatgcacagcaattcaggttcacttggctctacttgctcttctct 53904435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 21189026 - 21188963
Alignment:
Q  140 tgctaaatcaaaatcagaattatat-aactattatcattgagagatagtctcacccttacctta 202  Q
    |||||||||| |||||||||||||| |||||| |||||||| || ||  |||||||||||||||    
T  21189026 tgctaaatcagaatcagaattatataaactataatcattgaaagttaacctcacccttacctta 21188963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 52501475 - 52501546
Alignment:
Q  188 ctcacccttaccttaattcagaa-gaaaaatggacaacgatcggattcccttggctctacttgctcttctct 258  Q
    ||||||||||||||||||||||| |||||||| ||| | || | |||| || || |||||||||||||||||    
T  52501475 ctcacccttaccttaattcagaatgaaaaatgcacagcaattgaattctctgggttctacttgctcttctct 52501546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 257
Target Start/End: Original strand, 16485671 - 16485741
Alignment:
Q  189 tcacccttaccttaattcagaagaa-aaatggacaacgatcggattcccttggctctactt-gctcttctc 257  Q
    ||||||||||||||||||||| ||| ||||| |||   ||||||||| ||||||||||||| |||||||||    
T  16485671 tcacccttaccttaattcagatgaacaaatgcacagaaatcggattcacttggctctacttggctcttctc 16485741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 30147927 - 30147989
Alignment:
Q  138 tatgctaaatcaaaatcagaa-ttatataa-ctattatcattgagagatagtctcacccttac 198  Q
    |||| |||||||||||||||| |||||||| |||| || |||||||| |||||||||||||||    
T  30147927 tatgttaaatcaaaatcagaagttatataatctataattattgagagttagtctcacccttac 30147989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 45005828 - 45005886
Alignment:
Q  36 ctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||||||| |||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  45005828 ctgaacatcaattcttaacacaatttcaatggtttctacacttttcaattcaaaaatca 45005886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 201
Target Start/End: Original strand, 14049590 - 14049655
Alignment:
Q  138 tatgctaaatcaaaatcagaa-ttatataa-ctattatcattgagagatagtctcacccttacctt 201  Q
    |||| |||||||||||||||| |||||||| |||| || |||||||| | ||||||||||||||||    
T  14049590 tatgttaaatcaaaatcagaagttatataatctataattattgagagttggtctcacccttacctt 14049655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 15408150 - 15408194
Alignment:
Q  157 aattatataactattatcattgagagatagtctcacccttacctta 202  Q
    ||||||||| |||| || ||||||||||||||||||||||||||||    
T  15408150 aattatata-ctatgattattgagagatagtctcacccttacctta 15408194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 16228281 - 16228224
Alignment:
Q  188 ctcacccttaccttaattcagaagaa-aaatggacaacgatcggattcccttggctct 244  Q
    |||||||||||||||| ||||| ||| ||||| ||||| ||||||||| |||||||||    
T  16228281 ctcacccttaccttaaatcagatgaacaaatgcacaacaatcggattctcttggctct 16228224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 22724722 - 22724681
Alignment:
Q  166 actattatcattgagagatagtctcacccttaccttaattca 207  Q
    |||||||| ||||||||||||||||||||||| || ||||||    
T  22724722 actattattattgagagatagtctcacccttatctgaattca 22724681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 181; Significance: 7e-98; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 19 - 207
Target Start/End: Complemental strand, 10684118 - 10683930
Alignment:
Q  19 tatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaat 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10684118 tatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaat 10684019  T
Q  119 tcccaatttcaactagaactatgctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttaccttaattca 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  10684018 tcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttacctgaattca 10683930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 20262026 - 20262214
Alignment:
Q  19 tatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaat 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20262026 tatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaat 20262125  T
Q  119 tcccaatttcaactagaactatgctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttaccttaattca 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  20262126 tcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttacctgaattca 20262214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 18 - 207
Target Start/End: Complemental strand, 13100921 - 13100732
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 117  Q
    ||||| |||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13100921 ctatgattattctacagtctgaacatcgattcttaacacaattgccatggtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 13100822  T
Q  118 ttcccaatttcaactagaactatgctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttaccttaattca 207  Q
    ||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  13100821 ttcacaatttcaactagaactatgctaaaccaaaatcagaattatataaccattatcattgagagatagtctcacccttacctgaattca 13100732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 23338586 - 23338478
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 117  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  23338586 ctatgtttattctacaacctgaacatcgattcttaacacaattgccatggtttctacacttttcaattcaagaatcatactcccaaaacctaacccccaa 23338487  T
Q  118 ttcccaatt 126  Q
    |||||||||    
T  23338486 ttcccaatt 23338478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 122
Target Start/End: Complemental strand, 20590469 - 20590365
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 117  Q
    ||||| ||||||||| | ||||||||| |||||||||||||||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  20590469 ctatgattattctaccacctgaacatcaattcttaacacaattgccatggtttctacacttttcaatccaataatcatactcccaaaacctaacccccaa 20590370  T
Q  118 ttccc 122  Q
    |||||    
T  20590369 ttccc 20590365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 25652174 - 25652273
Alignment:
Q  102 aaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttacctt 201  Q
    |||||||||||||||||||||||||||||||||||   ||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  25652174 aaaacctaacccccaattcccaatttcaactagaatcttgctaaaccaaaatcagaattgtataactattatcattgagagttagtcccacccttacctt 25652273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 51 - 201
Target Start/End: Original strand, 24161179 - 24161328
Alignment:
Q  51 taacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactat-gctaaatca 149  Q
    |||||| |||| |||| ||| |||||| || ||| ||| ||||||| ||  |||| ||||||||||||| |||| ||||||||||||  | |||||||||    
T  24161179 taacaccattgccatggtttttacactctttaattcaaaaatcataatc--aaaatctaacccccaatttccaaattcaactagaacccttgctaaatca 24161276  T
Q  150 aaatcagaattatataactattatcattgagagatagtctcacccttacctt 201  Q
    ||||||||| |||| |||||||||||||||||| ||||||||||||||||||    
T  24161277 aaatcagaagtatacaactattatcattgagagttagtctcacccttacctt 24161328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 258
Target Start/End: Original strand, 6483745 - 6483829
Alignment:
Q  175 attgagagatagtctcacccttaccttaattcagaagaa-aaatggacaacgatcggattcccttggctctacttgctcttctct 258  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||| | ||||| ||| |||||||||||||||||||||||||||||    
T  6483745 attgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatccgattcccttggctctacttgctcttctct 6483829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 258
Target Start/End: Original strand, 6487212 - 6487296
Alignment:
Q  175 attgagagatagtctcacccttaccttaattcagaagaa-aaatggacaacgatcggattcccttggctctacttgctcttctct 258  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||| | ||||| ||| |||||||||||||||||||||||||||||    
T  6487212 attgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatccgattcccttggctctacttgctcttctct 6487296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 23086390 - 23086452
Alignment:
Q  140 tgctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttacctta 202  Q
    |||||||||||||||||||||||| | |||| ||||||||||| ||| |||||||||||||||    
T  23086390 tgctaaatcaaaatcagaattatacatctataatcattgagagttagcctcacccttacctta 23086452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 41301116 - 41301040
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  41301116 ctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 41301040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 7187291 - 7187354
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| ||||||||||| | ||||||| ||||||||||||||| ||||| ||||||||||||||    
T  7187291 ctatgattattctacaaccagaacatcaattcttaacacaattatcatggtttctacacttttc 7187354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 22173164 - 22173101
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||  |||| ||||||||||||||    
T  22173164 ctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 22173101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 43707234 - 43707171
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| |||||||||||  |||||||| |||||||||||||||| |||| ||||||||||||||    
T  43707234 ctatgattattctacaacttgaacatcaattcttaacacaattgccatggtttctacacttttc 43707171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 10039124 - 10039062
Alignment:
Q  140 tgctaaatcaaaatcagaattatataa-ctattatcattgagagatagtctcacccttacctt 201  Q
    |||||||||||||||||||||||| || |||| ||||||||||| ||| ||||||||||||||    
T  10039124 tgctaaatcaaaatcagaattatacaaactataatcattgagagttagcctcacccttacctt 10039062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 23265153 - 23265205
Alignment:
Q  157 aattatataactattatcattgagagatagtctcacccttaccttaattcagaa 210  Q
    ||||||||| |||| || ||||||||||||||||||||||||||||||||||||    
T  23265153 aattatata-ctatgattattgagagatagtctcacccttaccttaattcagaa 23265205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 23280221 - 23280273
Alignment:
Q  157 aattatataactattatcattgagagatagtctcacccttaccttaattcagaa 210  Q
    ||||||||| |||| || ||||||||||||||||||||||||||||||||||||    
T  23280221 aattatata-ctatgattattgagagatagtctcacccttaccttaattcagaa 23280273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 210
Target Start/End: Original strand, 21908387 - 21908422
Alignment:
Q  175 attgagagatagtctcacccttaccttaattcagaa 210  Q
    ||||||||||||||||||||||||||||||||||||    
T  21908387 attgagagatagtctcacccttaccttaattcagaa 21908422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 25174883 - 25174954
Alignment:
Q  188 ctcacccttaccttaattcagaagaaaaatggacaacga--tcggattcccttggctctacttgctcttctct 258  Q
    ||||||||||||||||||||||||||||||| ||| | |  || | || ||||||||||||||||||||||||    
T  25174883 ctcacccttaccttaattcagaagaaaaatgcacagcaaattcaggtt-ccttggctctacttgctcttctct 25174954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 21072875 - 21072799
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||| |||||| |||| ||||||||| |||||||||||||||   ||| ||| ||||||||||||| ||| |||||    
T  21072875 ctatgattattccacaacctgaacatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatca 21072799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 31345985 - 31346061
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    |||||||||||||| |  |||||| || |||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  31345985 ctatgtttattctatagcctgaacttcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 31346061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 22860992 - 22861039
Alignment:
Q  187 tctcacccttaccttaattcag-aagaaaaatggacaacgatcggatt 233  Q
    |||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  22860992 tctcacccttaccttaattcagaaagacaaatgtacaacgatcggatt 22861039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 207
Target Start/End: Complemental strand, 23101488 - 23101458
Alignment:
Q  177 tgagagatagtctcacccttaccttaattca 207  Q
    |||||||||||||||||||||||||||||||    
T  23101488 tgagagatagtctcacccttaccttaattca 23101458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 19661478 - 19661441
Alignment:
Q  178 gagagatagtctcacccttaccttaattcagaagaaaa 215  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  19661478 gagagaaagtctcacccttaccttaatttagaagaaaa 19661441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 22795898 - 22795837
Alignment:
Q  102 aaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattata 163  Q
    ||||||||  ||| ||||||||||||| || ||||||| | |||| ||||||||||||||||    
T  22795898 aaaacctagacccaaattcccaatttctaccagaactaggttaaaccaaaatcagaattata 22795837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 230 - 258
Target Start/End: Original strand, 24659841 - 24659869
Alignment:
Q  230 gattcccttggctctacttgctcttctct 258  Q
    |||||||||||||||||||||||||||||    
T  24659841 gattcccttggctctacttgctcttctct 24659869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 35243715 - 35243643
Alignment:
Q  188 ctcacccttaccttaattcagaa-gaaaaatggacaacgatcggattccctt-ggctctacttgctcttctct 258  Q
    ||||||||||||||||||||||| ||||||||  || | | ||||||| ||| || |||||||||||||||||    
T  35243715 ctcacccttaccttaattcagaatgaaaaatgctcagccaacggattctcttgggttctacttgctcttctct 35243643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 178; Significance: 4e-96; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 12305928 - 12306117
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12305928 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 12306027  T
Q  118 ttcccaatttcaactagaactatgctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttaccttaattca 207  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12306028 ttcccaatttcaactagaactatgctaaaccaaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaattca 12306117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 3803679 - 3803870
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3803679 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatggtttctacacttttcaattcaagaatcatactccaaaaacctaacccccaa 3803778  T
Q  118 ttcccaatttcaactagaactatgctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttaccttaattcaga 209  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3803779 ttcccaatttcaactagaactatgctaaaccaaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaattcaga 3803870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 18 - 207
Target Start/End: Complemental strand, 29544220 - 29544031
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29544220 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcataccccaaaaacctaacccccaa 29544121  T
Q  118 ttcccaatttcaactagaactatgctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttaccttaattca 207  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  29544120 ttcccaatttcaactagaactatgctaaaccaaaatcagaattatataaccattatcattgagagatagtctcacccttacctgaattca 29544031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 18 - 201
Target Start/End: Complemental strand, 55291788 - 55291605
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 117  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  55291788 ctatgattattctacaacctgaacatcaattcttaacacaattgccatggtttctacacttttcaatccaagaatcatactcccaaaacctaacccccaa 55291689  T
Q  118 ttcccaatttcaactagaactatgctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttacctt 201  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  55291688 ttcccaatttcaactagaactattctaaaccaaaatcagaattatataaccattatcattgagagatagtctcacccttacctt 55291605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 18 - 200
Target Start/End: Original strand, 54521628 - 54521810
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 117  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  54521628 ctatatttattctacaatctgaacatcgattcttaacacaattgccatggtttctacacttttcaatccaagaatcatactccaaaaacctaaccctcaa 54521727  T
Q  118 ttcccaatttcaactagaactatgctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttacct 200  Q
    || |||||||||||||||||||||||||| ||| |||||||||||||||| |||||| |||||||||||||||||||||||||    
T  54521728 tttccaatttcaactagaactatgctaaaccaagatcagaattatataaccattatccttgagagatagtctcacccttacct 54521810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 18 - 207
Target Start/End: Complemental strand, 46722773 - 46722584
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 117  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||| |||  |||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  46722773 ctatgattattctacaacctgaacatcaattcttaacacaattgccatagtttccacacttttcaatccaagaatcatactcccaaaacctaacccccaa 46722674  T
Q  118 ttcccaatttcaactagaactatgctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttaccttaattca 207  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||  |   |||||||||||| ||||||    
T  46722673 ttcccaatttcaactagaactattctaaaccaaaatcagaattatataaccattatcattgagagtaaacatcacccttacctgaattca 46722584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 175 - 258
Target Start/End: Original strand, 9534355 - 9534438
Alignment:
Q  175 attgagagatagtctcacccttaccttaattcagaagaaaaatggacaacgatcggattcccttggctctacttgctcttctct 258  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9534355 attgagagatagtctcacccttaccttaattcagaagaaaaatgcacaacgatcggattcccttggctctacttgctcttctct 9534438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 69 - 201
Target Start/End: Original strand, 15238978 - 15239108
Alignment:
Q  69 ttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataact 168  Q
    ||||||||| || ||| ||| ||||||||||  |||||||||||||||||||||||||| |||||||||  ||||||| ||||||||||||| ||||||     
T  15238978 ttctacactctttaattcaaaaatcatactc--aaaacctaacccccaattcccaattttaactagaaccttgctaaaccaaaatcagaattgtataacc 15239075  T
Q  169 attatcattgagagatagtctcacccttacctt 201  Q
    |||||||||||||| ||||||||||||||||||    
T  15239076 attatcattgagagttagtctcacccttacctt 15239108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 10555172 - 10555280
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 117  Q
    ||||| ||||||||| | ||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  10555172 ctatgattattctaccacctgaacatcaattcttaacacaattgccatggtttctacacttttcaatccaagaatcatactcccaaaacctaaaccccaa 10555271  T
Q  118 ttcccaatt 126  Q
    |||||||||    
T  10555272 ttcccaatt 10555280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 51 - 201
Target Start/End: Complemental strand, 11325199 - 11325049
Alignment:
Q  51 taacacaattgtcatgatttctacacttttcaatccaagaa-tcatactccaaaaacctaacccccaattcccaatttcaactagaac-tatgctaaatc 148  Q
    |||||| |||| |||| |||||||||| |||||| ||| || ||||| ||  ||||||||||||||| || |||| |||||||||||| | || ||||||    
T  11325199 taacactattgccatggtttctacactcttcaattcaaaaaatcatagtc--aaaacctaacccccattttccaaattcaactagaacctttgttaaatc 11325102  T
Q  149 aaaatcagaattatataactattatcattgagagatagtctcacccttacctt 201  Q
    |||||||||| |||| |||||||| ||||||||| ||||||||||||||||||    
T  11325101 aaaatcagaagtatagaactattaacattgagagttagtctcacccttacctt 11325049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 80 - 205
Target Start/End: Complemental strand, 12855112 - 12854988
Alignment:
Q  80 tcaatccaagaatcatactccaaaaacctaacccccaa-ttcccaatttcaactagaactatgctaaatcaaaatcagaattatataactattatcattg 178  Q
    ||||||||| |||||||||   | ||||||||| |||| || || ||||||||||||||| || |||||||||||||||||| |||||| ||||||||||    
T  12855112 tcaatccaaaaatcatactt--agaacctaacctccaaatttcctatttcaactagaactttgttaaatcaaaatcagaattgtataaccattatcattg 12855015  T
Q  179 agagatagtctcacccttaccttaatt 205  Q
    |||||||||||   |||||||||||||    
T  12855014 agagatagtctactccttaccttaatt 12854988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 13437104 - 13437180
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||||||||||||||| |||||||||||||||||||||||||    || ||||||||||||||||| ||| |||||    
T  13437104 ctatgtttattctacaacctgaacatcgattcttaacacaatttcgttggtttctacacttttcaattcaaaaatca 13437180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 202
Target Start/End: Original strand, 13837039 - 13837190
Alignment:
Q  51 taacacaattgtcatgatttctacacttttcaatccaagaatca-tactccaaaaacctaacccccaattcccaatttcaactagaactat-gctaaatc 148  Q
    |||||||||||||||| |||||||||| |||||| ||| ||| | || ||  ||||||||| ||| | |||| ||||| ||| |||||  | |||||| |    
T  13837039 taacacaattgtcatggtttctacactcttcaattcaaaaattaatattc--aaaacctaatcccaatttccaaattt-aaccagaacccttgctaaaac 13837135  T
Q  149 aaaatcagaattatata-actattatcattgagagatagtctcacccttacctta 202  Q
    ||||||||||||||| | ||||| ||||||||||| |||||||||||||||||||    
T  13837136 aaaatcagaattatacagactataatcattgagagttagtctcacccttacctta 13837190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 16643948 - 16644011
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| ||||||||||| ||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  16643948 ctatgattattctacaacctgaacatcaattcttaacacaattatcatggtttctacacttttc 16644011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 42393 - 42469
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  42393 ctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 42469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 6820035 - 6820098
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||| |||  ||||||||||||||    
T  6820035 ctatgattattctacaacctgaacatcaattcttaacacaattgacatagtttctacacttttc 6820098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 11913784 - 11913847
Alignment:
Q  140 tgctaaatcaaaatcagaattatataa-ctattatcattgagagatagtctcacccttacctta 202  Q
    |||||||||||||||||||||||| || |||| ||||||||||| ||| |||||||||||||||    
T  11913784 tgctaaatcaaaatcagaattatacaacctataatcattgagagttagcctcacccttacctta 11913847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 51602588 - 51602525
Alignment:
Q  140 tgctaaatcaaaatcagaattatataa-ctattatcattgagagatagtctcacccttacctta 202  Q
    |||||||||||||||||||||||| || |||| ||||||||||| ||| |||||||||||||||    
T  51602588 tgctaaatcaaaatcagaattatacaatctataatcattgagagttagcctcacccttacctta 51602525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 258
Target Start/End: Original strand, 11889260 - 11889329
Alignment:
Q  189 tcacccttaccttaattcagaagaaaaatggacaacga-tcggattcccttggctctacttgctcttctct 258  Q
    |||||||||||||||||||||||||||||| ||||| | || | || ||||||||||||||||||||||||    
T  11889260 tcacccttaccttaattcagaagaaaaatgcacaacaattcaggtt-ccttggctctacttgctcttctct 11889329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 24152571 - 24152509
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacactttt 80  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||  |||| |||||||||||||    
T  24152571 ctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacactttt 24152509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 43549842 - 43549776
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaat 84  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||   ||| |||||||||||||||||    
T  43549842 ctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacacttttcaat 43549776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 5224188 - 5224264
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||||||||||||||  |||||| || |||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  5224188 ctatgtttattctacagcctgaacttcaattcttaacacaatttcaatggtttctacacttttcaattcaaaaatca 5224264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 10833492 - 10833416
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||| ||||||| ||||||| ||||| |||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  10833492 ctatgattattctgcaatctggacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 10833416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 15465960 - 15466036
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||||||||||||||  |||||| || |||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  15465960 ctatgtttattctacagcctgaacttcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 15466036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 17240540 - 17240505
Alignment:
Q  175 attgagagatagtctcacccttaccttaattcagaa 210  Q
    ||||||||||||||||||||||||||||||||||||    
T  17240540 attgagagatagtctcacccttaccttaattcagaa 17240505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 210
Target Start/End: Original strand, 18929273 - 18929308
Alignment:
Q  175 attgagagatagtctcacccttaccttaattcagaa 210  Q
    ||||||||||||||||||||||||||||||||||||    
T  18929273 attgagagatagtctcacccttaccttaattcagaa 18929308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 30123437 - 30123374
Alignment:
Q  140 tgctaaatcaaaatcagaattata-taactattatcattgagagatagtctcacccttacctta 202  Q
    ||||||||||||||||||||||||  |||||| ||||||||||| ||| |||| ||||||||||    
T  30123437 tgctaaatcaaaatcagaattatacaaactataatcattgagagttagcctcaaccttacctta 30123374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 50243678 - 50243741
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| |||||||||||  |||||||| |||||||||||||||  |||| ||||||||||||||    
T  50243678 ctatgattattctacaacatgaacatcaattcttaacacaattaccatggtttctacacttttc 50243741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 12153875 - 12153945
Alignment:
Q  188 ctcacccttaccttaattcagaagaaaaatggacaacga-tcggattcccttggctctacttgctcttctc 257  Q
    ||||||||||||||||||||||||||||||| ||| | | || | ||| |||||||||||||||| |||||    
T  12153875 ctcacccttaccttaattcagaagaaaaatgcacagcaattcaggttcacttggctctacttgctgttctc 12153945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 16324721 - 16324651
Alignment:
Q  24 ttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||||||||| ||||||||| |||||||||||||||   ||| |||||||||||| |||| ||| |||||    
T  16324721 ttattctacaacctgaacatcaattcttaacacaatttcaatggtttctacactttccaattcaaaaatca 16324651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 14762782 - 14762745
Alignment:
Q  178 gagagatagtctcacccttaccttaattcagaagaaaa 215  Q
    |||||||||||||||||||||||||||| |||||||||    
T  14762782 gagagatagtctcacccttaccttaatttagaagaaaa 14762745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 17497198 - 17497269
Alignment:
Q  188 ctcacccttaccttaattcagaa-gaaaaatggacaacgat-cggattcccttggctctacttgctcttctct 258  Q
    ||||||||||||||||||||||| || ||||| ||| | || |||||||| ||||||||||||||||||||||    
T  17497198 ctcacccttaccttaattcagaaagacaaatgcacagcaattcggattcc-ttggctctacttgctcttctct 17497269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 26054621 - 26054545
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||||||||||||||  |||||| || |||||||||||||||   ||| |||||||| |||||||| ||| |||||    
T  26054621 ctatgtttattctacagcctgaacttcaattcttaacacaatttcgatggtttctacaattttcaattcaaaaatca 26054545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 13692941 - 13693012
Alignment:
Q  188 ctcacccttaccttaattcagaa-gaaaaatggacaacga-tcggattcccttggctctacttgctcttctc 257  Q
    ||||||||||||||||||||||| |||||||| ||| | | || | ||| ||||||||||||||||||||||    
T  13692941 ctcacccttaccttaattcagaaggaaaaatgcacagcaattcaggttcacttggctctacttgctcttctc 13693012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 15233110 - 15233166
Alignment:
Q  69 ttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaattt 127  Q
    ||||||||| || ||| ||| ||||||||||  ||||||||||||||||||||||||||    
T  15233110 ttctacactctttaattcaaaaatcatactc--aaaacctaacccccaattcccaattt 15233166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 2247716 - 2247650
Alignment:
Q  138 tatgctaaatcaaaatcagaa-ttatataact-attatcattgagagatagtctcacccttacctta 202  Q
    |||| |||||||||||||||| |||||||| | || || |||||||| |||||||||||||||||||    
T  2247716 tatgttaaatcaaaatcagaagttatataatttataattattgagagttagtctcacccttacctta 2247650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 30205675 - 30205613
Alignment:
Q  140 tgctaaatcaaaatcagaattatata-actattatcattgagagatagtctcacccttacctt 201  Q
    ||||||| || ||||||||||||||| ||||| |  |||||||| ||||||||||||||||||    
T  30205675 tgctaaaacagaatcagaattatatagactataactattgagagttagtctcacccttacctt 30205613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 43929262 - 43929319
Alignment:
Q  24 ttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||||||||| || |||||| | |||||||||||||  |||| ||||||||||||||    
T  43929262 ttattctacaacctaaacatcaagtcttaacacaattagcatggtttctacacttttc 43929319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 230 - 258
Target Start/End: Complemental strand, 11939032 - 11939004
Alignment:
Q  230 gattcccttggctctacttgctcttctct 258  Q
    |||||||||||||||||||||||||||||    
T  11939032 gattcccttggctctacttgctcttctct 11939004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 230 - 258
Target Start/End: Complemental strand, 11964058 - 11964030
Alignment:
Q  230 gattcccttggctctacttgctcttctct 258  Q
    |||||||||||||||||||||||||||||    
T  11964058 gattcccttggctctacttgctcttctct 11964030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 230 - 258
Target Start/End: Original strand, 12364439 - 12364467
Alignment:
Q  230 gattcccttggctctacttgctcttctct 258  Q
    |||||||||||||||||||||||||||||    
T  12364439 gattcccttggctctacttgctcttctct 12364467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 207
Target Start/End: Complemental strand, 20247816 - 20247784
Alignment:
Q  175 attgagagatagtctcacccttaccttaattca 207  Q
    |||||||||||||||||||||||||| ||||||    
T  20247816 attgagagatagtctcacccttacctgaattca 20247784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 76 - 201
Target Start/End: Original strand, 385083 - 385208
Alignment:
Q  76 cttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataactattatca 175  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  385083 cttttcaatccaaaaatcatactccaaaaacctaatccccaattcccaatttcaactagaactatgctaaaccaaaatcagaattatataaccattatca 385182  T
Q  176 ttgagagatagtctcacccttacctt 201  Q
    ||||||||||||||||||||||||||    
T  385183 ttgagagatagtctcacccttacctt 385208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 116907 - 116964
Alignment:
Q  157 aattatataactattatcattgagagatagtctcacccttaccttaattcagaagaaaa 215  Q
    ||||||||| |||| || ||||||||||||||||||||||||||||||| |||||||||    
T  116907 aattatata-ctatgattattgagagatagtctcacccttaccttaatttagaagaaaa 116964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 5e-43; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 297221 - 297329
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 117  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  297221 ctatgtttattctacaacctgaacatcgattcttaacacaattgccatggtttctacacttttcaattcaagaatcatactcccaaaacctaacccccaa 297320  T
Q  118 ttcccaatt 126  Q
    |||||||||    
T  297321 ttcccaatt 297329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 205
Target Start/End: Original strand, 24476279 - 24476383
Alignment:
Q  102 aaaacctaacccccaattcccaatttcaactagaactatgctaaatc-aaaatcagaattatataactattatcattgagagatagtctcacccttacct 200  Q
    |||| |||| ||| ||||||||||||| ||||||||||||||||| | ||||||||||||| ||||| || || ||||||||||||||||||||||||||    
T  24476279 aaaatctaaacccaaattcccaatttctactagaactatgctaaacccaaaatcagaattacataaccatcattattgagagatagtctcacccttacct 24476378  T
Q  201 taatt 205  Q
    |||||    
T  24476379 taatt 24476383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 102 - 205
Target Start/End: Complemental strand, 21526884 - 21526781
Alignment:
Q  102 aaaacctaacccccaattcccaatttcaactagaacta-tgctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttacct 200  Q
    ||||||||||||||||||| |||||||||||||||| | ||||||| ||||||||||| ||||  ||||| ||||||||||| || ||||||||||||||    
T  21526884 aaaacctaacccccaattctcaatttcaactagaaccattgctaaaccaaaatcagaagtata-cactatcatcattgagagttattctcacccttacct 21526786  T
Q  201 taatt 205  Q
    |||||    
T  21526785 taatt 21526781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 209
Target Start/End: Complemental strand, 25091505 - 25091411
Alignment:
Q  116 aattcccaatttcaactagaactatgctaaatc-aaaatcagaattatataactattatcattgagagatagtctcacccttaccttaattcaga 209  Q
    ||||||||||| | ||||||||||||||||| | ||||||||||| | |||||  |||| |||||||||||||||||||||||||||||||||||    
T  25091505 aattcccaattactactagaactatgctaaacccaaaatcagaatcacataaccgttattattgagagatagtctcacccttaccttaattcaga 25091411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 258
Target Start/End: Complemental strand, 15315668 - 15315596
Alignment:
Q  187 tctcacccttaccttaattcagaagaaaaatggacaacga-tcggattcccttggctctacttgctcttctct 258  Q
    |||||||||||||||||||||||||||||||| ||| | | || | ||| |||||||||||||||||||||||    
T  15315668 tctcacccttaccttaattcagaagaaaaatgcacagcaattcaggttcgcttggctctacttgctcttctct 15315596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 22130212 - 22130136
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||| ||||||||||| || |||||| ||||||||||||||| | ||| ||||||||||||||||| ||| |||||    
T  22130212 ctatgattattctacaaccttaacatcaattcttaacacaattttgatggtttctacacttttcaattcaaaaatca 22130136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 13880723 - 13880660
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||  |||| ||||||||||||||    
T  13880723 ctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 13880660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 21180339 - 21180280
Alignment:
Q  143 taaatcaaaatcagaattatataactattatcattgagagatagtctcacccttacctta 202  Q
    ||||||||||||||||| ||| | |||| ||||||||||| |||||||||||||||||||    
T  21180339 taaatcaaaatcagaatcatacatctataatcattgagagttagtctcacccttacctta 21180280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 32651583 - 32651640
Alignment:
Q  157 aattatataactattatcattgagagatagtctcacccttaccttaattcagaagaaaa 215  Q
    ||||||||| |||| || ||||||||||||||||||||||||||||||| |||||||||    
T  32651583 aattatata-ctatgattattgagagatagtctcacccttaccttaatttagaagaaaa 32651640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 36615903 - 36615975
Alignment:
Q  188 ctcacccttaccttaattcagaagaa-aaatggacaacgat-cggattcccttggctctacttgctcttctct 258  Q
    |||||||||||||||||||||||| | ||||| ||| | || ||||||||||||| |||||||||||||||||    
T  36615903 ctcacccttaccttaattcagaagcacaaatgcacagcaattcggattcccttggttctacttgctcttctct 36615975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 43089354 - 43089426
Alignment:
Q  188 ctcacccttaccttaattcagaagaa-aaatggacaacgat-cggattcccttggctctacttgctcttctct 258  Q
    |||||||||||||||||||||||| | ||||| ||| | || ||||||||||||| |||||||||||||||||    
T  43089354 ctcacccttaccttaattcagaagcacaaatgcacagcaattcggattcccttggttctacttgctcttctct 43089426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 45574206 - 45574130
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||   ||| ||||| ||||||||||| ||| |||||    
T  45574206 ctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctgcacttttcaattcaaaaatca 45574130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 18419103 - 18419174
Alignment:
Q  188 ctcacccttaccttaattcagaa-gaaaaatggacaacgatcggattcccttggctctacttgctcttctct 258  Q
    ||||||||||||||||||||||| |||||||| ||||| || | |||| || || |||||||||||||||||    
T  18419103 ctcacccttaccttaattcagaatgaaaaatgcacaacaattgaattctctgggttctacttgctcttctct 18419174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 11158118 - 11158156
Alignment:
Q  172 atcattgagagatagtctcacccttaccttaattcagaa 210  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  11158118 atcattgagagttagtctcacccttaccttaattcagaa 11158156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 10811819 - 10811778
Alignment:
Q  166 actattatcattgagagatagtctcacccttaccttaattca 207  Q
    |||||||| |||||||||||||||||||||||||| ||||||    
T  10811819 actattattattgagagatagtctcacccttacctgaattca 10811778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 201
Target Start/End: Original strand, 13227875 - 13227940
Alignment:
Q  138 tatgctaaatcaaaatcagaa-ttatataa-ctattatcattgagagatagtctcacccttacctt 201  Q
    |||| |||||||||||||||| |||||||| |||| || |||||||| ||||||||||||||||||    
T  13227875 tatgttaaatcaaaatcagaagttatataatctataattattgagagttagtctcacccttacctt 13227940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 18712810 - 18712862
Alignment:
Q  157 aattatataactattatcattgagagatagtctcacccttaccttaattcagaa 210  Q
    ||||||||| |||| || |||||||||||||||||||| |||||||||||||||    
T  18712810 aattatata-ctatgattattgagagatagtctcacccataccttaattcagaa 18712862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 20437051 - 20436991
Alignment:
Q  175 attgagagatagtctcacccttaccttaattcagaagaa-aaatggacaacgatcggattc 234  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||| | ||||| |||||||||    
T  20437051 attgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatcggattc 20436991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 28313214 - 28313290
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||| |||||| |||| ||||||||| |||||||||||||||   ||| ||| ||||||||||||| ||| |||||    
T  28313214 ctatgattattccacaacctgaacatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatca 28313290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 163
Target Start/End: Complemental strand, 21986124 - 21986077
Alignment:
Q  116 aattcccaatttcaactagaactatgctaaatcaaaatcagaattata 163  Q
    |||||||||||| ||| ||||||||| |||| ||||||||||||||||    
T  21986124 aattcccaattttaaccagaactatgttaaaccaaaatcagaattata 21986077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 29536063 - 29536125
Alignment:
Q  138 tatgctaaatcaaaatcagaa-ttatataa-ctattatcattgagagatagtctcacccttac 198  Q
    |||| |||||||||||||||| |||||||| |||| || |||||||| |||||||||||||||    
T  29536063 tatgttaaatcaaaatcagaagttatataatctataattattgagagttagtctcacccttac 29536125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 21963983 - 21964055
Alignment:
Q  188 ctcacccttaccttaattcag--aagaaaaatggacaacgatcggattcccttggctctacttgctcttctct 258  Q
    |||||||||||||||||||||  |||||||||| ||| | |  |||||  ||||| |||||||||||||||||    
T  21963983 ctcacccttaccttaattcagcaaagaaaaatgtacagcaaaaggattatcttggttctacttgctcttctct 21964055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 18025885 - 18025821
Alignment:
Q  195 ttaccttaattcagaa-gaaaaatggacaacgatcggattcccttggctctacttgctcttctct 258  Q
    |||||||||||||||| |||||||| ||| | || |||||| || || |||||||||||||||||    
T  18025885 ttaccttaattcagaatgaaaaatgcacagcaattggattctctgggttctacttgctcttctct 18025821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 258
Target Start/End: Original strand, 21665177 - 21665249
Alignment:
Q  187 tctcacccttaccttaattcagaagaaaaa-tggacaacgatcggattcccttggctctacttgctcttctct 258  Q
    |||||||||||||||| ||  | ||||||| || ||||| ||  ||||| |||||||||||||||||||||||    
T  21665177 tctcacccttaccttagttttgcagaaaaaatgcacaacaatttgattctcttggctctacttgctcttctct 21665249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 69 - 201
Target Start/End: Complemental strand, 31580 - 31449
Alignment:
Q  69 ttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactat-gctaaatcaaaatcagaattatataac 167  Q
    ||||||||| || ||| ||| ||||||| ||  ||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||| |||| |||    
T  31580 ttctacactctttaattcaaaaatcataatc--aaaacctaacccccaattcccaatttcaactagaacccttgctaaaccaaaatcagaagtatacaac 31483  T
Q  168 tattatcattgagagatagtctcacccttacctt 201  Q
    ||||||||||||||| ||||||||||||||||||    
T  31482 tattatcattgagagttagtctcacccttacctt 31449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 58 - 201
Target Start/End: Original strand, 22617542 - 22617684
Alignment:
Q  58 attgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactat-gctaaatcaaaatcag 156  Q
    |||| |||| |||||||||| || ||| ||| ||||| | ||  ||||||||||||||||||||||||||||||||||||  | |||||| |||||||||    
T  22617542 attgccatggtttctacactctttaattcaaaaatcaaaatc--aaaacctaacccccaattcccaatttcaactagaacccttgctaaaccaaaatcag 22617639  T
Q  157 aattatataactattatcattgagagatagtctcacccttacctt 201  Q
    || |||| |||||||||||||||||| ||||||||||||||||||    
T  22617640 aagtatacaactattatcattgagagttagtctcacccttacctt 22617684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 39364939 - 39364988
Alignment:
Q  166 actattatcattgagagatagtctcacccttaccttaattcagaagaaaa 215  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  39364939 actattattattgagagatagtctcacccttaccttaattcagaagaaaa 39364988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 364852 - 364920
Alignment:
Q  140 tgctaaatcaaaatcagaattatataa-ctattatcattgagagatagtctcacccttaccttaattca 207  Q
    |||||||||||||||||||||||| || |||| ||||||||||| ||||||||||||||||| ||||||    
T  364852 tgctaaatcaaaatcagaattatacaaactataatcattgagagttagtctcacccttacctgaattca 364920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 8413935 - 8413859
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  8413935 ctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 8413859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 17460394 - 17460331
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||  |||| ||||||||||||||    
T  17460394 ctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 17460331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 20258161 - 20258090
Alignment:
Q  188 ctcacccttaccttaattcagaagaaaaa-tggacaacgatcggattcccttggctctacttgctcttctct 258  Q
    |||||||||||||||||| |||||||||| || ||  |||| |||||| |||||||||||||||||||||||    
T  20258161 ctcacccttaccttaatttagaagaaaaaatgcaccgcgattggattctcttggctctacttgctcttctct 20258090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 202
Target Start/End: Original strand, 20387386 - 20387536
Alignment:
Q  51 taacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaacta--tgctaaatc 148  Q
    |||||| ||||||||| ||||||||||||||||| ||| |||||    |  ||||||||| ||| ||||||||| || ||| |||||    |||||||||    
T  20387386 taacactattgtcatggtttctacacttttcaattcaaaaatcaataac--aaaacctaatccc-aattcccaaatttaaccagaaccccttgctaaatc 20387482  T
Q  149 aaaatcagaattatataactattatcattgagagatagtctcacccttacctta 202  Q
    ||||||||||||||| ||| || |  |||||||| ||| |||||||||||||||    
T  20387483 aaaatcagaattatacaaccataactattgagagttagcctcacccttacctta 20387536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 20455852 - 20455915
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||  |||| ||||||||||||||    
T  20455852 ctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 20455915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 20463060 - 20463123
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||  |||| ||||||||||||||    
T  20463060 ctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 20463123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 21044791 - 21044720
Alignment:
Q  188 ctcacccttaccttaattcagaagaaaaa-tggacaacgatcggattcccttggctctacttgctcttctct 258  Q
    |||||||||||||||||| |||||||||| || ||  |||| |||||| |||||||||||||||||||||||    
T  21044791 ctcacccttaccttaatttagaagaaaaaatgcaccgcgattggattctcttggctctacttgctcttctct 21044720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 23661162 - 23661225
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||  |||| ||||||||||||||    
T  23661162 ctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 23661225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 43113015 - 43113078
Alignment:
Q  140 tgctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttaccttaa 203  Q
    ||||||| || ||||||||||||| |||||| ||||||||||| ||| ||||||||||||||||    
T  43113015 tgctaaaacataatcagaattataaaactataatcattgagagttagcctcacccttaccttaa 43113078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 257
Target Start/End: Original strand, 18614300 - 18614380
Alignment:
Q  175 attgagagatagtctcacccttaccttaattcagaagaaaaatggacaacgatcggattcccttggctctacttgctcttctc 257  Q
    ||||||||||||||||||||||||||||||| ||||| |||| | |||| |||||||||| | || ||||||||| |||||||    
T  18614300 attgagagatagtctcacccttaccttaatttagaag-aaaacgcacaatgatcggattctc-tgactctacttgttcttctc 18614380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 20494413 - 20494351
Alignment:
Q  140 tgctaaatcaaaatcagaattatataa-ctattatcattgagagatagtctcacccttacctt 201  Q
    |||||||||||||||||||||||| || |||| ||||||||||| ||| ||||||||||||||    
T  20494413 tgctaaatcaaaatcagaattatacaaactataatcattgagagttagcctcacccttacctt 20494351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 21860600 - 21860535
Alignment:
Q  138 tatgctaaatcaaaatcagaa-ttatataa-ctattatcattgagagatagtctcacccttacctt 201  Q
    |||| |||||||||||||||| |||||||| |||| ||||||||||| ||||||||||||||||||    
T  21860600 tatgttaaatcaaaatcagaagttatataatctataatcattgagagttagtctcacccttacctt 21860535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 38184762 - 38184689
Alignment:
Q  138 tatgctaaatcaaaatcagaa-ttatataact-attatcattgagagatagtctcacccttaccttaattcaga 209  Q
    |||| |||||||||||||||| |||||||| | || || |||||||| ||||||||||||||||||||||||||    
T  38184762 tatgttaaatcaaaatcagaagttatataatttataattattgagagttagtctcacccttaccttaattcaga 38184689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 19882813 - 19882889
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||| ||||||||||| ||||||||| ||| |||||||||||   ||| ||||||||||||||||| ||| |||||    
T  19882813 ctatgattattctacaacctgaacatcaatttttaacacaatttcgatggtttctacacttttcaattcaaaaatca 19882889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 25483628 - 25483552
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||| ||||||||||| || |||||| |||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  25483628 ctatgattattctacaacctaaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 25483552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 257
Target Start/End: Complemental strand, 21685234 - 21685163
Alignment:
Q  188 ctcacccttaccttaattcagaagaa-aaatggacaacgatcggattcccttggctctactt-gctcttctc 257  Q
    |||||||||||||||||||||| ||| ||||| ||||| ||| | ||||||||||||||||| |||||||||    
T  21685234 ctcacccttaccttaattcagatgaacaaatgcacaacaatctggttcccttggctctacttggctcttctc 21685163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 257
Target Start/End: Complemental strand, 21689583 - 21689512
Alignment:
Q  188 ctcacccttaccttaattcagaagaa-aaatggacaacgatcggattcccttggctctactt-gctcttctc 257  Q
    |||||||||||||||||||||| ||| ||||| ||||| ||| | ||||||||||||||||| |||||||||    
T  21689583 ctcacccttaccttaattcagatgaacaaatgcacaacaatctggttcccttggctctacttggctcttctc 21689512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 22433678 - 22433615
Alignment:
Q  140 tgctaaatcaaaatcagaattatata-actattatcattgagagatagtctcacccttacctta 202  Q
    ||||||| |||||||||||||||| | ||||| ||||||||||| ||| |||||||||||||||    
T  22433678 tgctaaaacaaaatcagaattatacagactataatcattgagagttagcctcacccttacctta 22433615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 35541975 - 35542046
Alignment:
Q  188 ctcacccttaccttaattcagaa-gaaaaatggacaacgatcggattcccttggctctacttgctcttctct 258  Q
    ||||||||||||||||||||||| |||||||| ||||| || | |||| || || |||||||||||||||||    
T  35541975 ctcacccttaccttaattcagaatgaaaaatgcacaacaattgaattctctgggttctacttgctcttctct 35542046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 42559518 - 42559455
Alignment:
Q  140 tgctaaatcaaaatcagaattatataa-ctattatcattgagagatagtctcacccttacctta 202  Q
    |||||||||||||||| ||||||| || |||| ||||||||||| ||| |||||||||||||||    
T  42559518 tgctaaatcaaaatcataattatacaaactataatcattgagagttagcctcacccttacctta 42559455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 14397097 - 14397031
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaat 84  Q
    ||||||||||||||||  |||||| || |||||||||||||||   ||| |||||||||||||||||    
T  14397097 ctatgtttattctacagcctgaacttcaattcttaacacaatttcgatggtttctacacttttcaat 14397031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 20455116 - 20455174
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacac 76  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||  |||| |||||||||    
T  20455116 ctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacac 20455174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 20460830 - 20460888
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacac 76  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||  |||| |||||||||    
T  20460830 ctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacac 20460888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 23482097 - 23482020
Alignment:
Q  157 aattatataactattatcattgagagatagtctcacccttaccttaattcagaagaa-aaatggacaacgatcggattc 234  Q
    ||||||||| |||| || ||||||||||||||||||||||||||||||| ||| ||| ||| | ||||| |||||||||    
T  23482097 aattatata-ctatgattattgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatcggattc 23482020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 28854816 - 28854874
Alignment:
Q  151 aatcagaattatataactattatcattgagagatagtctcacccttaccttaattcaga 209  Q
    |||||||||||||||||||  |||||||  || ||| ||||||||||||||||||||||    
T  28854816 aatcagaattatataactaaaatcattgcaagttagcctcacccttaccttaattcaga 28854874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 202
Target Start/End: Complemental strand, 14056600 - 14056564
Alignment:
Q  166 actattatcattgagagatagtctcacccttacctta 202  Q
    |||||||| ||||||||||||||||||||||||||||    
T  14056600 actattattattgagagatagtctcacccttacctta 14056564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 19860534 - 19860606
Alignment:
Q  188 ctcacccttaccttaattcagaa-gaaaaatggacaacga-tcggattcccttggctctacttgctcttctct 258  Q
    ||||||||||||||||||||||| ||||||||  |||| | |||| ||| |||||||||||||||||| ||||    
T  19860534 ctcacccttaccttaattcagaaggaaaaatgctcaacaattcgggttcacttggctctacttgctctactct 19860606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 21931722 - 21931766
Alignment:
Q  172 atcattgagagatagtctcacccttaccttaattcagaagaaaaa 216  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||    
T  21931722 atcattgagagttagcctcacccttaccttaattcagatgaaaaa 21931766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 202
Target Start/End: Original strand, 25111995 - 25112031
Alignment:
Q  166 actattatcattgagagatagtctcacccttacctta 202  Q
    |||||||| ||||||||||||||||||||||||||||    
T  25111995 actattattattgagagatagtctcacccttacctta 25112031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 21682852 - 21682790
Alignment:
Q  188 ctcacccttaccttaattcagaagaa-aaatggacaacgatcggattcccttggctctacttg 249  Q
    ||||||||||||||||||  || ||| ||||| ||||| || |||||||||||||||||||||    
T  21682852 ctcacccttaccttaatttggatgaacaaatgcacaacaataggattcccttggctctacttg 21682790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 11775598 - 11775655
Alignment:
Q  37 tgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    |||||||| |||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  11775598 tgaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 11775655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 21299411 - 21299350
Alignment:
Q  102 aaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattata 163  Q
    ||||||||  ||| ||||||||||||| || ||||||| | |||| ||||||||||||||||    
T  21299411 aaaacctagacccaaattcccaatttctaccagaactaggttaaaccaaaatcagaattata 21299350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 205
Target Start/End: Complemental strand, 23646778 - 23646721
Alignment:
Q  148 caaaatcagaattatataactattatcattgagagatagtctcacccttaccttaatt 205  Q
    ||||||||||| | ||||||||||    ||||||||||||||||||||| ||||||||    
T  23646778 caaaatcagaactttataactattgatgttgagagatagtctcacccttgccttaatt 23646721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 29643413 - 29643373
Alignment:
Q  175 attgagagatagtctcacccttaccttaattcagaagaaaa 215  Q
    ||||| ||||| ||||||||||||||||||| |||||||||    
T  29643413 attgaaagataatctcacccttaccttaatttagaagaaaa 29643373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 182149 - 182049
Alignment:
Q  102 aaaacctaacccccaattcccaatttcaactagaac-tatgctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttacct 200  Q
    ||||||||||||||| |||||||||||||||||||| | ||||||| ||||||||||| |||| |||||||||||||||||| |||||||||||||||||    
T  182149 aaaacctaacccccacttcccaatttcaactagaacctttgctaaaccaaaatcagaagtatacaactattatcattgagagttagtctcacccttacct 182050  T
Q  201 t 201  Q
    |    
T  182049 t 182049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 174294 - 174232
Alignment:
Q  19 tatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    |||| ||||||||||| |||| |||| ||||||||||||||||||||| ||||||||||||||    
T  174294 tatgattattctacaacctgaccatcaattcttaacacaattgtcatggtttctacacttttc 174232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 17602 - 17532
Alignment:
Q  188 ctcacccttaccttaattcagaagaaaaatggacaacgatcggattcccttggctctacttgctcttctct 258  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  17602 ctcacccttaccttaattcagaagaaaaatgcacaacgatcggattcccttggctctacttcctcttctct 17532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 205
Target Start/End: Original strand, 1419 - 1523
Alignment:
Q  102 aaaacctaacccccaattcccaatttcaactagaactatgctaaatc-aaaatcagaattatataactattatcattgagagatagtctcacccttacct 200  Q
    |||| |||| ||| ||||||||||||| |||||||||||| |||| | ||||||||||| | ||||| ||||||||||||||||||||||||||||||||    
T  1419 aaaatctaaacccaaattcccaatttctactagaactatgttaaacccaaaatcagaataacataaccattatcattgagagatagtctcacccttacct 1518  T
Q  201 taatt 205  Q
    |||||    
T  1519 taatt 1523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 51 - 201
Target Start/End: Original strand, 189630 - 189779
Alignment:
Q  51 taacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactat-gctaaatca 149  Q
    |||||| |||| |||| ||| |||||| |||||| ||| ||||||| ||  ||||||||||||||| || |||| ||||||||||||  | | |||||||    
T  189630 taacaccattgccatggtttgtacactcttcaattcaaaaatcataatc--aaaacctaacccccattttccaaattcaactagaacccttgttaaatca 189727  T
Q  150 aaatcagaattatataactattatcattgagagatagtctcacccttacctt 201  Q
    ||||||||| |||| |||||||||||||||||| | ||||||||||||||||    
T  189728 aaatcagaagtatagaactattatcattgagagttggtctcacccttacctt 189779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 172 - 258
Target Start/End: Complemental strand, 79122 - 79036
Alignment:
Q  172 atcattgagagatagtctcacccttaccttaattcagaagaaaaatggacaacgatcggattcccttggctctacttgctcttctct 258  Q
    ||||||||||| ||| |||||||||||||||||| |||||||||| | ||||||||||||||| || ||||||||||||||||||||    
T  79122 atcattgagagttagcctcacccttaccttaatttagaagaaaaacgcacaacgatcggattctctcggctctacttgctcttctct 79036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 8957 - 9119
Alignment:
Q  19 tatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaat 118  Q
    |||| ||||||||||| ||||||||| |||||||||||||||| |||| |||||||||||||| |  ||| | | ||| ||  |||||||||  ||||||    
T  8957 tatgattattctacaacctgaacatcaattcttaacacaattgccatggtttctacacttttctaatcaaaattaataatc--aaaacctaa-tcccaat 9053  T
Q  119 tcccaatttcaactagaa--ctatgctaaatcaaaatcagaattatataactattatcattgagag 182  Q
    |||||| || ||| ||||  |  |||||||||||||||||||||||| |||||| |||||||||||    
T  9054 tcccaaatttaaccagaaccccttgctaaatcaaaatcagaattatacaactataatcattgagag 9119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 258
Target Start/End: Complemental strand, 15027 - 14943
Alignment:
Q  172 atcattgagagatagtctcacccttaccttaattcagaagaaaaatggacaacgatcggattcccttggctctacttgctcttctct 258  Q
    ||||||||||| |||||||||||||||||||||| |||||||||  | |||||||||||||||||||||||||||||| ||||||||    
T  15027 atcattgagagttagtctcacccttaccttaatt-agaagaaaac-gcacaacgatcggattcccttggctctacttgttcttctct 14943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 941 - 1004
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| ||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||    
T  941 ctatgattattctacaacctgaacatcaattcttaacacaattatcatgatttctacacttttc 1004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 202
Target Start/End: Original strand, 5421 - 5508
Alignment:
Q  116 aattcccaatttcaactagaactatgctaaatc-aaaatcagaattatataactattatcattgagagatagtctcacccttacctta 202  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||| ||||| | ||||  ||||| ||||||||||||||||||||||    
T  5421 aattcccaattttaaccagaactatgctaaatccaaaatcagaatcatatacccattactattgaaagatagtctcacccttacctta 5508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 52290 - 52357
Alignment:
Q  188 ctcacccttaccttaattcagaagaaaaatggacaacgatcggattcccttggctctacttgctcttc 255  Q
    |||||||||||||||||| ||| ||||| || ||||||||||||||| ||||||||||||||||||||    
T  52290 ctcacccttaccttaatttagacgaaaagtgcacaacgatcggattcgcttggctctacttgctcttc 52357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 2276 - 2219
Alignment:
Q  24 ttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  2276 ttattctacaacctgaacatcaattcttaacacaattgtcatggtttctacacttttc 2219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 1005 - 1190
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaa 117  Q
    ||||| |||| |||||| ||||||||| | |||||||||||||   ||| ||||||||||||||||| ||| ||||| |   ||||| ||||| ||| ||    
T  1005 ctatgattatcctacaacctgaacatcaactcttaacacaatttctatggtttctacacttttcaattcaaaaatcaaaaatcaaaa-cctaatccc-aa 1102  T
Q  118 ttcccaatttcaactagaacta--tgctaaatcaaaatcagaattatataa-ctattatcattgagagatagtctcacccttacctta 202  Q
    ||||||| || ||| | |||    |||||||||||||||||||| ||| || |||| ||||||||||| ||| |||||||||||||||    
T  1103 ttcccaaatttaaccacaaccccttgctaaatcaaaatcagaatcatacaaactataatcattgagagttagcctcacccttacctta 1190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 7197 - 7121
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||||||||||||||  |||||||||||||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  7197 ctatgtttattctacagcctgaacatcgattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 7121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 3829 - 3905
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    |||||||||||| |||| |||||||||||||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  3829 ctatgtttattcaacaacctgaacatcgattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 3905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 8029 - 8092
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| ||||||||||| ||||||||| |||||||| ||||||| |||||||||||||||||||    
T  8029 ctatgattattctacaacctgaacatcaattcttaaaacaattgccatgatttctacacttttc 8092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 206
Target Start/End: Original strand, 8155 - 8219
Alignment:
Q  143 taaatcaaaatcagaattatataa-ctattatcattgagagatagtctcacccttaccttaattc 206  Q
    |||||||| |||||||||||| || |||| ||||||||||| ||||||||||||||| |||||||    
T  8155 taaatcaagatcagaattatacaaactataatcattgagagttagtctcacccttactttaattc 8219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 72302 - 72365
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| ||||||||||| ||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  72302 ctatgattattctacaacctgaacatcaattcttaacacaattatcatggtttctacacttttc 72365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 258
Target Start/End: Original strand, 69771 - 69856
Alignment:
Q  172 atcattgagagatagtctcacccttaccttaattcagaagaaaaatggacaacgatcggattcccttggctctacttgctcttctct 258  Q
    |||||||| || |||||||||||||||||||||| ||||| |||| |  ||||||||| |||| |||||||||||||| ||||||||    
T  69771 atcattgaaagttagtctcacccttaccttaatttagaag-aaaacgcgcaacgatcgaattctcttggctctacttgttcttctct 69856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 257
Target Start/End: Complemental strand, 22168 - 22048
Alignment:
Q  140 tgctaaatcaaaatcagaattatataa-ctattatcattgagagatagtctcacccttaccttaattcagaagaa-aaatggacaacgatcggattccct 237  Q
    |||||||||||||||| ||||||| || |||| ||||||||||| ||| |||| ||||||||||||||||| ||| ||| | || || ||| | ||| ||    
T  22168 tgctaaatcaaaatcataattatacaaactataatcattgagagttagcctcatccttaccttaattcagatgaacaaaagcacgacaatctggttcact 22069  T
Q  238 tggctctactt-gctcttctc 257  Q
    ||||||||||| |||||||||    
T  22068 tggctctacttggctcttctc 22048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 39999 - 39923
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  39999 ctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 39923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 1060 - 1123
Alignment:
Q  140 tgctaaatcaaaatcagaattatataa-ctattatcattgagagatagtctcacccttacctta 202  Q
    |||||||||||||||||||||||| || |||| ||||||||||| ||| |||||||||||||||    
T  1060 tgctaaatcaaaatcagaattatacaaactataatcattgagagttagcctcacccttacctta 1123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 8516 - 8575
Alignment:
Q  143 taaatcaaaatcagaattatataactattatcattgagagatagtctcacccttacctta 202  Q
    ||||||||||||||||||||| | |||| ||||||||||| ||| |||||||||||||||    
T  8516 taaatcaaaatcagaattatacatctataatcattgagagttagcctcacccttacctta 8575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 4225 - 4295
Alignment:
Q  188 ctcacccttaccttaattcagaagaaaaatggacaacga-tcggattcccttggctctacttgctcttctct 258  Q
    ||||||||||||||||||||||||||||||| ||||  | |||| || ||||||||||||||||||||||||    
T  4225 ctcacccttaccttaattcagaagaaaaatgcacaataattcgggtt-ccttggctctacttgctcttctct 4295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 26790 - 26720
Alignment:
Q  188 ctcacccttaccttaattcagaagaaaaatggacaacga-tcggattcccttggctctacttgctcttctct 258  Q
    ||||||||||||||||||||||||||||||| ||| | | |||| || ||||||||||||||||||||||||    
T  26790 ctcacccttaccttaattcagaagaaaaatgcacagcaattcgggtt-ccttggctctacttgctcttctct 26720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 1547 - 1617
Alignment:
Q  188 ctcacccttaccttaattcagaagaaaaatggacaacga-tcggattcccttggctctacttgctcttctct 258  Q
    ||||||||||||||||||||||||||||||| ||| | | |||| || ||||||||||||||||||||||||    
T  1547 ctcacccttaccttaattcagaagaaaaatgcacagcaattcgggtt-ccttggctctacttgctcttctct 1617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 121928 - 122015
Alignment:
Q  172 atcattgagagatagtctcacccttaccttaattcagaagaa-aaatggacaacgatcggattcccttggctctactt-gctcttctc 257  Q
    ||||||||||| ||| |||||||||||||||||||||| ||| ||||| ||||| ||| | ||| ||||||||||||| |||||||||    
T  121928 atcattgagagttagcctcacccttaccttaattcagatgaacaaatgcacaacaatctggttcacttggctctacttggctcttctc 122015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 132804 - 132891
Alignment:
Q  172 atcattgagagatagtctcacccttaccttaattcagaagaa-aaatggacaacgatcggattcccttggctctactt-gctcttctc 257  Q
    ||||||||||| ||| |||||||||||||||||||||| ||| ||||| ||||| ||| | ||| ||||||||||||| |||||||||    
T  132804 atcattgagagttagcctcacccttaccttaattcagatgaacaaatgcacaacaatctggttcacttggctctacttggctcttctc 132891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 7946 - 8008
Alignment:
Q  140 tgctaaatcaaaatcagaattatataa-ctattatcattgagagatagtctcacccttacctt 201  Q
    |||||||||||||||||||||||| || |||| ||||||||||| ||| ||||||||||||||    
T  7946 tgctaaatcaaaatcagaattatacaaactataatcattgagagttagcctcacccttacctt 8008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 21849 - 21911
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacactttt 80  Q
    ||||| ||||||||||| ||||||||| ||| |||||||||||| |||| |||||||||||||    
T  21849 ctatgattattctacaacctgaacatcaattgttaacacaattgccatggtttctacactttt 21911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 101973 - 101920
Alignment:
Q  156 gaattatataactattatcattgagagatagtctcacccttaccttaattcagaa 210  Q
    |||||||||| |||| || ||||||||||||||||||||||||||||||||||||    
T  101973 gaattatata-ctatgattattgagagatagtctcacccttaccttaattcagaa 101920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 16831 - 16883
Alignment:
Q  157 aattatataactattatcattgagagatagtctcacccttaccttaattcagaa 210  Q
    ||||||||| |||| || ||||||||||||||||||||||||||||||||||||    
T  16831 aattatata-ctatgattattgagagatagtctcacccttaccttaattcagaa 16883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 11615 - 11688
Alignment:
Q  138 tatgctaaatcaaaatcagaa-ttatataact-attatcattgagagatagtctcacccttaccttaattcaga 209  Q
    |||| |||||||||||||||| |||||||| | || || |||||||| ||||||||||||||||||||||||||    
T  11615 tatgttaaatcaaaatcagaaattatataatttataattattgagagttagtctcacccttaccttaattcaga 11688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 26603 - 26671
Alignment:
Q  190 cacccttaccttaattcagaagaaaaatggacaacga-tcggattcccttggctctacttgctcttctct 258  Q
    ||||||||||||||||||||||||||||| ||| | | |||| || ||||||||||||||||||||||||    
T  26603 cacccttaccttaattcagaagaaaaatgcacagcaattcgggtt-ccttggctctacttgctcttctct 26671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 9960 - 10025
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaa 83  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||   ||| ||||||||||||||||    
T  9960 ctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacacttttcaa 10025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 51991 - 52052
Alignment:
Q  143 taaatcaaaatcagaa-ttatataa-ctattatcattgagagatagtctcacccttacctta 202  Q
    |||||||||||||||| |||||||| |||| ||||||||||| |||||||||||||||||||    
T  51991 taaatcaaaatcagaagttatataatctataatcattgagagttagtctcacccttacctta 52052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 163205 - 163262
Alignment:
Q  24 ttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||||||||| ||||||||| |||||||||||||||  |||| ||||||||||||||    
T  163205 ttattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 163262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 105988 - 106052
Alignment:
Q  140 tgctaaatcaaaatcagaa-ttatataa-ctattatcattgagagatagtctcacccttacctta 202  Q
    ||||||||||| |||| || |||||||| |||  ||||||||||| |||||||||||||||||||    
T  105988 tgctaaatcaacatcaaaagttatataatctaaaatcattgagagttagtctcacccttacctta 106052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 102 - 205
Target Start/End: Original strand, 9606 - 9710
Alignment:
Q  102 aaaacctaacccccaattcccaatttcaactagaactatgctaaatc-aaaatcagaattatataactattatcattgagagatagtctcacccttacct 200  Q
    |||| |||| ||| ||||||||| ||| || ||||||||| |||| | ||||||||||||| ||| | || |  ||||||||||| ||||||||||||||    
T  9606 aaaatctaaacccaaattcccaaattctaccagaactatgttaaacccaaaatcagaattacatagccatcactattgagagataatctcacccttacct 9705  T
Q  201 taatt 205  Q
    |||||    
T  9706 taatt 9710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 18459 - 18535
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||||||||||||||  |||||| || |||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  18459 ctatgtttattctacagcctgaacttcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 18535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 2306 - 2362
Alignment:
Q  189 tcacccttaccttaattcagaa-gaaaaatggacaacgatcggattcccttggctct 244  Q
    |||||||||||||||||||||| || ||||| ||||||||||||||| |||||||||    
T  2306 tcacccttaccttaattcagaaggacaaatgcacaacgatcggattctcttggctct 2362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 258
Target Start/End: Complemental strand, 37830 - 37759
Alignment:
Q  189 tcacccttaccttaattcagaag--aaaaatggacaacgatcggattcccttggctctacttgctcttctct 258  Q
    |||||||||||||||||||||||  ||||||| ||   ||| |||||| |||||||||||||||||||||||    
T  37830 tcacccttaccttaattcagaaggaaaaaatgcaccgtgattggattctcttggctctacttgctcttctct 37759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 258
Target Start/End: Complemental strand, 135891 - 135820
Alignment:
Q  189 tcacccttaccttaattcagaag--aaaaatggacaacgatcggattcccttggctctacttgctcttctct 258  Q
    |||||||||||||||||||||||  ||||||| ||   ||| |||||| |||||||||||||||||||||||    
T  135891 tcacccttaccttaattcagaaggaaaaaatgcaccgtgattggattctcttggctctacttgctcttctct 135820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 169305 - 169381
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||| ||||||||||| |||||| || |||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  169305 ctatgattattctacaacctgaacttcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 169381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 176658 - 176734
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||| ||||||||||| |||||| || |||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  176658 ctatgattattctacaacctgaacttcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 176734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 251
Target Start/End: Original strand, 179965 - 180030
Alignment:
Q  188 ctcacccttaccttaattcagaag-aaaaatggacaacga-tcggattcccttggctctacttgct 251  Q
    |||||||||||||||||||||||| | ||||| ||||| | |||||||||||||| ||||||||||    
T  179965 ctcacccttaccttaattcagaagcacaaatgcacaacaattcggattcccttggttctacttgct 180030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 2214 - 2151
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| ||||||||||| |||||||||  ||||||||||||||  |||| ||||||||||||||    
T  2214 ctatgattattctacaacctgaacatcagttcttaacacaattaccatggtttctacacttttc 2151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 1418 - 1489
Alignment:
Q  188 ctcacccttaccttaattcagaagaaaaatggacaacgatcgga-ttcccttggctctacttgctcttctct 258  Q
    |||||||||||||||||||||||| |||||| ||| | |||  | ||| |||||||||||||||||||||||    
T  1418 ctcacccttaccttaattcagaaggaaaatgcacagcaatccaagttcacttggctctacttgctcttctct 1489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 3784 - 3843
Alignment:
Q  144 aaatcaaaatcagaa-ttatataa-ctattatcattgagagatagtctcacccttacctt 201  Q
    ||||||||||||||| |||||||| |||| ||||||||||| ||||||||||||||||||    
T  3784 aaatcaaaatcagaagttatataatctataatcattgagagttagtctcacccttacctt 3843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 12915 - 12978
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| |||||||||||  |||||||| |||||||||||||||  |||| ||||||||||||||    
T  12915 ctatgattattctacaacatgaacatcaattcttaacacaattaccatggtttctacacttttc 12978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 9462 - 9532
Alignment:
Q  188 ctcacccttaccttaattcagaagaaaaatggacaacga-tcggattcccttggctctacttgctcttctct 258  Q
    ||||||||||||||||||||||||||||||| ||| | | |||| ||  |||||||||||||||||||||||    
T  9462 ctcacccttaccttaattcagaagaaaaatgcacagcaattcgggtt-gcttggctctacttgctcttctct 9532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 1996 - 2066
Alignment:
Q  24 ttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||||||||| || |||||| |||||||||||||||  |||  ||||||||||||||||| ||| |||||    
T  1996 ttattctacaacctaaacatcaattcttaacacaattagcatagtttctacacttttcaattcaaaaatca 2066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 2109 - 2169
Alignment:
Q  143 taaatcaaaatcagaattatataa-ctattatcattgagagatagtctcacccttacctta 202  Q
    ||||||||||||||||||||| || ||||  |||||||||| ||| |||||||||||||||    
T  2109 taaatcaaaatcagaattatacaaactatattcattgagagctagcctcacccttacctta 2169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 19485 - 19410
Alignment:
Q  19 tatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    |||||||||||||||  |||||| || |||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  19485 tatgtttattctacagcctgaacttcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 19410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 938 - 1001
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| ||||||||||| ||||||||| | |||||||||||||  |||| ||||||||||||||    
T  938 ctatgattattctacaacctgaacatcaactcttaacacaattaccatggtttctacacttttc 1001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 210
Target Start/End: Original strand, 13660 - 13695
Alignment:
Q  175 attgagagatagtctcacccttaccttaattcagaa 210  Q
    ||||||||||||||||||||||||||||||||||||    
T  13660 attgagagatagtctcacccttaccttaattcagaa 13695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 1237 - 1174
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| ||||||||||| ||||||||| ||| |||||||||||  |||| ||||||||||||||    
T  1237 ctatgattattctacaacctgaacatcaatttttaacacaattaccatggtttctacacttttc 1174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 42162 - 42225
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| |||||||||||  |||||||| |||||||||||||||  |||| ||||||||||||||    
T  42162 ctatgattattctacaacatgaacatcaattcttaacacaattaccatggtttctacacttttc 42225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 258
Target Start/End: Original strand, 45348 - 45416
Alignment:
Q  189 tcacccttaccttaattcagaagaaaaatggacaacga-tcggattcccttggctctacttgctcttctct 258  Q
    |||||||||||||||||||||||||||||| ||| | | |||| ||  |||||||||||||||||||||||    
T  45348 tcacccttaccttaattcagaagaaaaatgcacagcaattcgggtt--cttggctctacttgctcttctct 45416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 82864 - 82920
Alignment:
Q  19 tatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctaca 75  Q
    |||| |||||||||||  |||||||| ||||||||||||||| ||||| ||||||||    
T  82864 tatgattattctacaacttgaacatcaattcttaacacaattatcatggtttctaca 82920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 3738 - 3798
Alignment:
Q  140 tgctaaatcaaaatcagaattatataactattatcattgagagatagtctcacccttacctta 202  Q
    |||||||||||||||||||||||| | ||| |||||||||||| ||| |||||||||||||||    
T  3738 tgctaaatcaaaatcagaattata-atcta-tatcattgagagttagcctcacccttacctta 3798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 209
Target Start/End: Complemental strand, 35 - 1
Alignment:
Q  175 attgagagatagtctcacccttaccttaattcaga 209  Q
    |||||||||||||||||||||||||||||||||||    
T  35 attgagagatagtctcacccttaccttaattcaga 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 203
Target Start/End: Complemental strand, 15256 - 15104
Alignment:
Q  51 taacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactat-gctaaatca 149  Q
    |||||| |||| ||||| |||||||||||||||| ||| ||||| ||    |||||||||| || ||||||||| || |||| ||||  | ||||||| |    
T  15256 taacactattgccatgaattctacacttttcaattcaaaaatca-acaattaaaacctaactcc-aattcccaaatttaacttgaacccttgctaaatta 15159  T
Q  150 aaatcagaattatata-actattatcattgagagatagtctcacccttaccttaa 203  Q
    |||||||||||||| | ||||| || |||||||| ||| ||||| ||||||||||    
T  15158 aaatcagaattatacagactataattattgagagttagcctcacgcttaccttaa 15104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 4159 - 4102
Alignment:
Q  188 ctcacccttaccttaattcagaa-gaaaaatggacaacgatcggattcccttggctct 244  Q
    |||||| |||||||||||||||| || ||||| ||||||||||||||| |||||||||    
T  4159 ctcaccattaccttaattcagaaagacaaatgcacaacgatcggattctcttggctct 4102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 2909 - 2844
Alignment:
Q  140 tgctaaatcaaaatcagaa-ttatataa-ctattatcattgagagatagtctcacccttaccttaa 203  Q
    ||||||||||| ||||||| |||||||| |||  ||||||||||| ||||||||||||||||||||    
T  2909 tgctaaatcaacatcagaagttatataatctaaaatcattgagagttagtctcacccttaccttaa 2844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 205
Target Start/End: Original strand, 587 - 656
Alignment:
Q  138 tatgctaaatcaaaatcagaa-ttatataact-attatcattgagagatagtctcacccttaccttaatt 205  Q
    |||| |||||||||||||||| |||||||| | || || |||||||| ||||||||||||||||||||||    
T  587 tatgttaaatcaaaatcagaagttatataatttataattattgagagttagtctcacccttaccttaatt 656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 11646 - 11710
Alignment:
Q  140 tgctaaatcaaaatcagaa-ttatataa-ctattatcattgagagatagtctcacccttacctta 202  Q
    ||||||||||| ||||||| |||||||| |||  ||||||||||| |||||||||||||||||||    
T  11646 tgctaaatcaacatcagaagttatataatctaaaatcattgagagttagtctcacccttacctta 11710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 68978 - 69038
Alignment:
Q  143 taaatcaaaatcagaa-ttatataa-ctattatcattgagagatagtctcacccttacctt 201  Q
    |||||||||||||||| |||||||| |||| || |||||||| ||||||||||||||||||    
T  68978 taaatcaaaatcagaagttatataatctataattattgagagttagtctcacccttacctt 69038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 67689 - 67749
Alignment:
Q  138 tatgctaaatcaaaatcagaa-ttatataa-ctattatcattgagagatagtctcaccctt 196  Q
    |||| |||||||||||||||| |||||||| |||| ||||||||||| |||||||||||||    
T  67689 tatgttaaatcaaaatcagaagttatataatctataatcattgagagttagtctcaccctt 67749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 1778 - 1841
Alignment:
Q  140 tgctaaatcaaaatcagaa-ttatataa-ctattatcattgagagatagtctcacccttacctt 201  Q
    ||||||||||| ||||||| |||||||| |||  ||||||||||| ||||||||||||||||||    
T  1778 tgctaaatcaacatcagaagttatataatctaaaatcattgagagttagtctcacccttacctt 1841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 23310 - 23247
Alignment:
Q  18 ctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttc 81  Q
    ||||| |||||||||||  |||||||| |||||||||||||||  |||| |||||||| |||||    
T  23310 ctatgattattctacaacatgaacatcaattcttaacacaattaccatggtttctacatttttc 23247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 1411 - 1449
Alignment:
Q  172 atcattgagagatagtctcacccttaccttaattcagaa 210  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  1411 atcattgaaagatagtctcacccttaccttatttcagaa 1449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 23887 - 23829
Alignment:
Q  36 ctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||||||| |||||||||||||||   ||| ||||||||||||||||| ||| |||||    
T  23887 ctgaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 23829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 218
Target Start/End: Original strand, 10386 - 10416
Alignment:
Q  188 ctcacccttaccttaattcagaagaaaaatg 218  Q
    |||||||||||||||||||||||||||||||    
T  10386 ctcacccttaccttaattcagaagaaaaatg 10416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 34498 - 34552
Alignment:
Q  148 caaaatcagaattatataactattatcattgagagatagtctcacccttacctta 202  Q
    |||||||||||| ||| | |||| ||||||||||| ||| |||||||||||||||    
T  34498 caaaatcagaatcatacatctataatcattgagagttagcctcacccttacctta 34552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 201
Target Start/End: Original strand, 21833 - 21898
Alignment:
Q  138 tatgctaaatcaaaatcagaa-ttatataac-tattatcattgagagatagtctcacccttacctt 201  Q
    |||| |||||||||||||||| ||||||||  ||| || |||||||| ||||||||||||||||||    
T  21833 tatgttaaatcaaaatcagaagttatataatatataattattgagagttagtctcacccttacctt 21898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 42541 - 42613
Alignment:
Q  22 gtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatca 94  Q
    ||||||||||||  |||||| || ||||||||||| |||   ||| ||||||||||||||||| ||| |||||    
T  42541 gtttattctacagcctgaacttcaattcttaacactatttcaatggtttctacacttttcaattcaaaaatca 42613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 33993 - 33931
Alignment:
Q  140 tgctaaatcaaaatcagaattatataa-ctattatcattgagagatagtctcacccttacctt 201  Q
    ||||||| || |||||||||||||||| |||| | ||||||||| ||| ||||||||||||||    
T  33993 tgctaaaacagaatcagaattatataaactataaccattgagagttagcctcacccttacctt 33931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 1474 - 1507
Alignment:
Q  172 atcattgagagatagtctcacccttaccttaatt 205  Q
    ||||||||||| ||||||||||||||||||||||    
T  1474 atcattgagagttagtctcacccttaccttaatt 1507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 7536 - 7471
Alignment:
Q  138 tatgctaaatcaaaatcagaa-ttatataa-ctattatcattgagagatagtctcacccttacctt 201  Q
    |||| ||||||||||| |||| |||||||| |||| || |||||||| ||||||||||||||||||    
T  7536 tatgttaaatcaaaattagaagttatataatctataattattgagagttagtctcacccttacctt 7471  T

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Target: scaffold0610 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 6540 - 6607
Alignment:
Q  188 ctcacccttaccttaattcagaagaaaaatggacaacgatcggattcccttggctctacttgctcttctc 257  Q
    |||||||||||||||||| ||||| |||| | |||||||||| |||| | |||||||||||| |||||||    
T  6540 ctcacccttaccttaatttagaag-aaaacgcacaacgatcgaattctc-tggctctacttgttcttctc 6607  T

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Target: scaffold0107 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 40576 - 40532
Alignment:
Q  157 aattatataactattatcattgagagatagtctcacccttacctta 202  Q
    ||||||||| |||| || ||||||||||||||||||||||||||||    
T  40576 aattatata-ctatgattattgagagatagtctcacccttacctta 40532  T

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Target: scaffold0046 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 161
Target Start/End: Original strand, 71510 - 71555
Alignment:
Q  116 aattcccaatttcaactagaactatgctaaatcaaaatcagaatta 161  Q
    |||||||||||| ||| ||||||||| |||| ||||||||||||||    
T  71510 aattcccaattttaaccagaactatgttaaaccaaaatcagaatta 71555  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 135484 - 135528
Alignment:
Q  157 aattatataactattatcattgagagatagtctcacccttacctta 202  Q
    ||||||||| |||| || ||||||||||||||||||||||||||||    
T  135484 aattatata-ctatgattattgagagatagtctcacccttacctta 135528  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 147969 - 148022
Alignment:
Q  188 ctcacccttaccttaattcagaagaa-aaatggacaacgatcggattcccttgg 240  Q
    |||||||||||||||| |||||| || ||||| ||||||||||||||| |||||    
T  147969 ctcacccttaccttaaatcagaaaaacaaatgcacaacgatcggattctcttgg 148022  T

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Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 155156 - 155209
Alignment:
Q  188 ctcacccttaccttaattcagaa-gaaaaatggacaacgatcggattcccttgg 240  Q
    |||||||||||||||| |||||| || ||||| ||||||||||||||| |||||    
T  155156 ctcacccttaccttaaatcagaaagacaaatgcacaacgatcggattctcttgg 155209  T

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Target: scaffold1461 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 1515 - 1471
Alignment:
Q  172 atcattgagagatagtctcacccttaccttaattcagaagaaaaa 216  Q
    |||||||  ||||| ||||||||||||||||||| ||||||||||    
T  1515 atcattgcaagataatctcacccttaccttaatttagaagaaaaa 1471  T

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Target: scaffold0483 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 11051 - 11007
Alignment:
Q  172 atcattgagagatagtctcacccttaccttaattcagaagaaaaa 216  Q
    |||||||  ||||| ||||||||||||||||||| ||||||||||    
T  11051 atcattgcaagataatctcacccttaccttaatttagaagaaaaa 11007  T

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Target: scaffold0235 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 22637 - 22594
Alignment:
Q  157 aattatataactattatcattgagagatagtctcacccttacctt 201  Q
    ||||||||| |||| || |||||||||||||||||||||||||||    
T  22637 aattatata-ctatgattattgagagatagtctcacccttacctt 22594  T

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Target: scaffold0216 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 22327 - 22391
Alignment:
Q  138 tatgctaaatcaaaatcagaa-ttatataa-ctattatcattgagagatagtctcacccttacct 200  Q
    |||| ||||||||||||| || |||||||| |||| || |||||||| |||||||||||||||||    
T  22327 tatgttaaatcaaaatcataagttatataatctataattattgagagttagtctcacccttacct 22391  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 42167 - 42111
Alignment:
Q  107 ctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattata 163  Q
    |||| ||| |||||||||||| ||| ||||||||| |||| |||| |||||||||||    
T  42167 ctaaacccaaattcccaattttaaccagaactatgttaaaccaaactcagaattata 42111  T

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Target: scaffold0049; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 52862 - 52806
Alignment:
Q  107 ctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattata 163  Q
    |||| ||| |||||||||||| ||| ||||||||| |||| |||| |||||||||||    
T  52862 ctaaacccaaattcccaattttaaccagaactatgttaaaccaaactcagaattata 52806  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 36502 - 36562
Alignment:
Q  103 aaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattata 163  Q
    |||||||| ||| ||||||||||||| || ||||  ||| |||| ||||||||||||||||    
T  36502 aaacctaaacccaaattcccaatttctaccagaaacatgttaaaccaaaatcagaattata 36562  T

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