View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21662_high_31 (Length: 242)
Name: NF21662_high_31
Description: NF21662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21662_high_31 |
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Alignment Details
Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 36083405 - 36083632
Alignment:
| Q |
1 |
atatagcctccttttgatgacataatatatgggaccaagaaattaaagcaaataattaaggtggtcaatagactaaatgctaagcaatacttatgtggtt |
100 |
Q |
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| T |
36083405 |
atatagcctccttttgatgacataatatatgtgactaagaaattaaagcaaataattaaggtggtcaatagactaaatgctaagcaatacttatgtggtt |
36083504 |
T |
|
| Q |
101 |
atatcaaaagcaaaacacattgggatcactttgtctccttgaacaaatcctatgttgtaaagatattataaaagnnnnnnngcaaacaacagttagtact |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
36083505 |
atatcaaaagcaaaacacattgggatcactttgtctccttgaacaaatcctatgttgtaaagatattataaaagaaaaaaagcaaacaacagttagtact |
36083604 |
T |
|
| Q |
201 |
aaacagttggaaaatctaacctttttct |
228 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
36083605 |
aaacagttggaaaatctaacctttttct |
36083632 |
T |
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