View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21662_low_22 (Length: 283)
Name: NF21662_low_22
Description: NF21662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21662_low_22 |
 | |
|
| [»] chr1 (27 HSPs) |
| |
|
Alignment Details
Target: chr1 (Bit Score: 275; Significance: 1e-154; HSPs: 27)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 10979566 - 10979284
Alignment:
| Q |
1 |
ttctacactttgatataaagcctcataacatccttcttgatgaaaatttcaatccaaaagtttctgattttggacttgctagactctgtcctacagataa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
10979566 |
ttctacactttgatataaagcctcataacatccttcttgatgaaaatttcaatccaaaagtttctgattttggacttgctagactttgtcctacagataa |
10979467 |
T |
|
| Q |
101 |
aagcattgtgtcattaactgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgta |
200 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10979466 |
aagctttgtgtcattaactgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgta |
10979367 |
T |
|
| Q |
201 |
tatagttttgggatgttgttgatggagatggcaagtagaaggaggaacttgaatgcaatggctgagcaatctagccaaattta |
283 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10979366 |
tatagttttgggatgttgttgatggagatggcaagtagaaggaggaacttgaatgcaatggctgagcaatctagccaaattta |
10979284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 11011132 - 11010850
Alignment:
| Q |
1 |
ttctacactttgatataaagcctcataacatccttcttgatgaaaatttcaatccaaaagtttctgattttggacttgctagactctgtcctacagataa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
11011132 |
ttctacactttgatataaagcctcataacattcttcttgatgaaaatttcaatccaaaagtttctgattttggactagctagactttgtcctacagataa |
11011033 |
T |
|
| Q |
101 |
aagcattgtgtcattaactgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgta |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11011032 |
aagcattgtgtcattaactgcagcaagaggaaccattggatatatggcccctgaactattctacagaaatgttggcacaatatcttacaaagctgatgta |
11010933 |
T |
|
| Q |
201 |
tatagttttgggatgttgttgatggagatggcaagtagaaggaggaacttgaatgcaatggctgagcaatctagccaaattta |
283 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
11010932 |
tatagttttgggatgttgttgatggagatggcaagtagaaggaagaacttgaatgcattggctgagcaatccagccaaattta |
11010850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 11007970 - 11007694
Alignment:
| Q |
1 |
ttctacactttgatataaagcctcataacatccttcttgatgaaaatttcaatccaaaagtttctgattttggacttgctagactctgtcctacagataa |
100 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
11007970 |
ttctacactttgacataaagcctcataacatccttcttgatgaaaatttcaatccaaaagtttctgattttggacttgctagactttgtcctacagataa |
11007871 |
T |
|
| Q |
101 |
aagcattgtgtcattaactgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgta |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||| |||||||||||||||||||| |
|
|
| T |
11007870 |
aagcattgtgtcattaactgcagcaagaggaaccattggatacatggcccctgaactattctaccgaaatgtcggcacgatatcttacaaagctgatgtt |
11007771 |
T |
|
| Q |
201 |
tatagttttgggatgttgttgatggagatggcaagtagaaggaggaacttgaatgcaatggctgagcaatctagcca |
277 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| |||||||| ||||||| ||| | |||||| ||||||||||| |
|
|
| T |
11007770 |
tatagttttgggatgttgttaatggagatggcaaatagaaggaagaacttggatgtattggctggtcaatctagcca |
11007694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 11004890 - 11005172
Alignment:
| Q |
1 |
ttctacactttgatataaagcctcataacatccttcttgatgaaaatttcaatccaaaagtttctgattttggacttgctagactctgtcctacagataa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| | | ||||||||| || |
|
|
| T |
11004890 |
ttctacactttgatataaagcctcataacatccttcttgatgaaaatttcaatccaaaagtttctgattttggattagctagggtttctcctacagacaa |
11004989 |
T |
|
| Q |
101 |
aagcattgtgtcattaactgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgta |
200 |
Q |
| |
|
|||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
11004990 |
aagcattgtgtccttaactgcagcaagaggaaccattggatacatggcccctgaactattctacagaaatgtcggcacaatatctcacaaagctgatgtc |
11005089 |
T |
|
| Q |
201 |
tatagttttgggatgttgttgatggagatggcaagtagaaggaggaacttgaatgcaatggctgagcaatctagccaaattta |
283 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||| |||||||||| |
|
|
| T |
11005090 |
tatagctttgggatgttgttgatggagatggcaagtagaaggaagaacttgaatccattggctgagcaatcttgccaaattta |
11005172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 10974488 - 10974206
Alignment:
| Q |
1 |
ttctacactttgatataaagcctcataacatccttcttgatgaaaatttcaatccaaaagtttctgattttggacttgctagactctgtcctacagataa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
10974488 |
ttctacactttgatataaagcctcataccatccttcttgatgaatatttcaatccaaaagtttctgattttggacttgctagactttgtcctacagataa |
10974389 |
T |
|
| Q |
101 |
aagcattgtgtcattaactgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgta |
200 |
Q |
| |
|
|||||||||| |||||||||| |||||||| || |||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
10974388 |
aagcattgtgccattaactgctgcaagaggaacgattggatacatggcccctgaactgttctacagaaatattggcacaatatcttacaaagctgatgtc |
10974289 |
T |
|
| Q |
201 |
tatagttttgggatgttgttgatggagatggcaagtagaaggaggaacttgaatgcaatggctgagcaatctagccaaattta |
283 |
Q |
| |
|
||||| |||||||||||||| ||||||||||| |||||||||| ||| ||||||||| |||| || ||||||||||||||||| |
|
|
| T |
10974288 |
tatagctttgggatgttgttaatggagatggcgagtagaaggaagaatttgaatgcattggccgatcaatctagccaaattta |
10974206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 11033423 - 11033141
Alignment:
| Q |
1 |
ttctacactttgatataaagcctcataacatccttcttgatgaaaatttcaatccaaaagtttctgattttggacttgctagactctgtcctacagataa |
100 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
11033423 |
ttctacactttgacataaagcctcataacatccttcttgatgagaatttcaacccaaaagtttctgattttggactagctagactttgtcctacagataa |
11033324 |
T |
|
| Q |
101 |
aagcattgtgtcattaactgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgta |
200 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
11033323 |
aagcattgtcacattaactgcagcaagaggaaccattggatatatggcccctgaactattctaccgaaatgtcggcacaatatcttacaaagctgatgtt |
11033224 |
T |
|
| Q |
201 |
tatagttttgggatgttgttgatggagatggcaagtagaaggaggaacttgaatgcaatggctgagcaatctagccaaattta |
283 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||| ||||| ||||| ||||| |
|
|
| T |
11033223 |
tatagttttgggatgttgttgatggagatggcaaatagaaggaagaacttgaatgcattggctgatcaatcaagccagattta |
11033141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 10914831 - 10914549
Alignment:
| Q |
1 |
ttctacactttgatataaagcctcataacatccttcttgatgaaaatttcaatccaaaagtttctgattttggacttgctagactctgtcctacagataa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || || | |||||||||||| |
|
|
| T |
10914831 |
ttctacactttgatataaagcctcataacatccttcttgatgaaaatttcaatccaaaagtttctgattttggactagccaggctttctcctacagataa |
10914732 |
T |
|
| Q |
101 |
aagcattgtgtcattaactgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgta |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| ||||| ||||| |||||| ||||||| |||||||| |||||||||||| |||||||||||||| |
|
|
| T |
10914731 |
aagcattgtgtcattaactgcagcaagaggaaccatcggatatatggcccctgaattattctatagaaatgtcggcacaatatctcacaaagctgatgta |
10914632 |
T |
|
| Q |
201 |
tatagttttgggatgttgttgatggagatggcaagtagaaggaggaacttgaatgcaatggctgagcaatctagccaaattta |
283 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||| ||||||| ||| ||||||||| ||||||| |||||||| ||||||| |
|
|
| T |
10914631 |
tatagctttgggatgttgttaatggagatggcaagcagaaggaagaatttgaatgcattggctgatcaatctagtgaaattta |
10914549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 11028475 - 11028757
Alignment:
| Q |
1 |
ttctacactttgatataaagcctcataacatccttcttgatgaaaatttcaatccaaaagtttctgattttggacttgctagactctgtcctacagataa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||| |||||||| |||||||||| ||| |
|
|
| T |
11028475 |
ttctacactttgatataaagcctcataacatccttcttgatgagaattttaatccaaaagtttctgatttcggactagctagactttgtcctacaggtaa |
11028574 |
T |
|
| Q |
101 |
aagcattgtgtcattaactgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgta |
200 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
11028575 |
tagcattgtgtcattaactgcagcaagaagaaccattggatacatggcccctgaactattctatagaaatgttggcacaatatcttacaaagctgatgtc |
11028674 |
T |
|
| Q |
201 |
tatagttttgggatgttgttgatggagatggcaagtagaaggaggaacttgaatgcaatggctgagcaatctagccaaattta |
283 |
Q |
| |
|
||||| |||||||||||||| |||||||| || | |||||||| ||| | ||||||| ||||||| ||||||||||||||||| |
|
|
| T |
11028675 |
tatagctttgggatgttgttaatggagattgcgaatagaaggaagaattagaatgcattggctgaacaatctagccaaattta |
11028757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 10903668 - 10903389
Alignment:
| Q |
1 |
ttctacactttgatataaagcctcataacatccttcttgatgaaaatttcaatccaaaagtttctgattttggacttgctagactctgtcctacagataa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||| | |||||||||||| |
|
|
| T |
10903668 |
ttctacactttgatataaagcctcataacattcttcttgatgaaagtttcaatccaaaagtttctgattttggacttgccagactttctcctacagataa |
10903569 |
T |
|
| Q |
101 |
aagcattgtgtcattaactgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgta |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||||| | |||||||||||||||||||| |
|
|
| T |
10903568 |
aagcattgtgtcattaactgcagcaagaggaaccattggata---tgcccctgaacttttctacagaaatgttggaatgatatcttacaaagctgatgtc |
10903472 |
T |
|
| Q |
201 |
tatagttttgggatgttgttgatggagatggcaagtagaaggaggaacttgaatgcaatggctgagcaatctagccaaattta |
283 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||| |||| || ||||||||||||||||| |
|
|
| T |
10903471 |
tatagctttgggatgttgttaatggagatggcaagtagaaggaagaacttgaatgcattggccgaacaatctagccaaattta |
10903389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 102 - 265
Target Start/End: Complemental strand, 10901730 - 10901567
Alignment:
| Q |
102 |
agcattgtgtcattaactgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgtat |
201 |
Q |
| |
|
|||||||| |||||||| ||||||||||| ||||||||||||||||| |||||| |||||||||||||||| |||||||||||| ||||||||||||| | |
|
|
| T |
10901730 |
agcattgtttcattaacagcagcaagaggaaccattggatacatggcccctgaattattctacagaaatgtcggcacaatatctcacaaagctgatgtct |
10901631 |
T |
|
| Q |
202 |
atagttttgggatgttgttgatggagatggcaagtagaaggaggaacttgaatgcaatggctga |
265 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
10901630 |
atagttttggaatgttgttgatggagatggcaagtagaaggaagaacttgaatgcattggctga |
10901567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 237
Target Start/End: Complemental strand, 9320136 - 9319908
Alignment:
| Q |
9 |
tttgatataaagcctcataacatccttcttgatgaaaatttcaatccaaaagtttctgattttggacttgctagactctgtcctacagataaaagcattg |
108 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||||| || || | || |||||||| || ||||| ||||||| || | ||||| || | ||||||| |
|
|
| T |
9320136 |
tttgatatcaagccccataacatccttcttgatgagaactttatccccaaagtttcagactttggtcttgctaagctttatcctaatgagattagcattg |
9320037 |
T |
|
| Q |
109 |
tgtcattaactgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgtatatagttt |
208 |
Q |
| |
|
| | ||||||||||||||||| || |||||||| |||||||||||| | ||||||| |||| |||| | |||| ||||| |||||||||||||| || |
|
|
| T |
9320036 |
tcactttaactgcagcaagaggaacaattggatatatggctcctgaattgttctacaaaaatattggaggagtatcctacaaggctgatgtatatagctt |
9319937 |
T |
|
| Q |
209 |
tgggatgttgttgatggagatggcaagta |
237 |
Q |
| |
|
|| ||| | |||||||| |||||||||| |
|
|
| T |
9319936 |
cggaatgcttttgatggaaatggcaagta |
9319908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 243
Target Start/End: Complemental strand, 8964746 - 8964512
Alignment:
| Q |
9 |
tttgatataaagcctcataacatccttcttgatgaaaatttcaatccaaaagtttctgattttggacttgctagactctgtcctacagataaaagcattg |
108 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||| ||||||| |||||||| ||||| |||||| | |||| || | |||| ||| || ||||||| |
|
|
| T |
8964746 |
tttgatattaagcctcacaacatccttcttgatgagaatttcaccccaaaagtctctgactttggattggctaagctatatcctgtagagaatagcattg |
8964647 |
T |
|
| Q |
109 |
tgtcattaactgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgtatatagttt |
208 |
Q |
| |
|
| || | || || |||||||| ||||||||||| |||||||| ||| | ||||| | |||| |||| | | || || || |||||||| ||||| || |
|
|
| T |
8964646 |
tcacaatgacagcggcaagaggtaccattggatatatggctccagaattgttctataaaaatattgggggagtgtcctataaggctgatgtttatagctt |
8964547 |
T |
|
| Q |
209 |
tgggatgttgttgatggagatggcaagtagaagga |
243 |
Q |
| |
|
||||||| | ||||||||||||||| ||| ||||| |
|
|
| T |
8964546 |
tgggatgcttttgatggagatggcaggtaaaagga |
8964512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 211
Target Start/End: Original strand, 9453700 - 9453902
Alignment:
| Q |
9 |
tttgatataaagcctcataacatccttcttgatgaaaatttcaatccaaaagtttctgattttggacttgctagactctgtcctacagataaaagcattg |
108 |
Q |
| |
|
|||||||| |||||||| |||||||||||||| |||||||||| || |||||||| |||||||| ||||| | || | ||||| || || ||||||| |
|
|
| T |
9453700 |
tttgatattaagcctcacaacatccttcttgacgaaaatttcatccctaaagtttcagattttggtcttgcaaagctttatcctattgacaatagcattg |
9453799 |
T |
|
| Q |
109 |
tgtcattaactgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgtatatagttt |
208 |
Q |
| |
|
| | || || ||||||||||| || ||||| ||||||||||||||| | |||||| |||| |||| | |||||| |||| || ||||| |||||||| |
|
|
| T |
9453800 |
tcgctttgacagcagcaagaggaacaattggttacatggctcctgaattgttctaccaaaatattgggagaatatcacacaaggccgatgtgtatagttt |
9453899 |
T |
|
| Q |
209 |
tgg |
211 |
Q |
| |
|
||| |
|
|
| T |
9453900 |
tgg |
9453902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 9 - 254
Target Start/End: Original strand, 9432713 - 9432958
Alignment:
| Q |
9 |
tttgatataaagcctcataacatccttcttgatgaaaatttcaatccaaaagtttctgattttggacttgctagactctgtcctacagataaaagcattg |
108 |
Q |
| |
|
|||||||| |||||||| ||||||||||| || |||||||||| || |||||||| || ||||| ||||| | || | ||||| || |||||||||| |
|
|
| T |
9432713 |
tttgatattaagcctcacaacatccttctggacgaaaatttcatccctaaagtttcggactttggtcttgcaaagctttatcctattgacaaaagcattg |
9432812 |
T |
|
| Q |
109 |
tgtcattaactgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgtatatagttt |
208 |
Q |
| |
|
| || || ||||||||||| || ||||| ||||||||||||||| | |||||| |||| |||| | |||||| |||| || ||||| |||||||| |
|
|
| T |
9432813 |
ccactttgacggcagcaagaggaacaattggttacatggctcctgaattgttctaccaaaatattgggagaatatcacacaaggccgatgtgtatagttt |
9432912 |
T |
|
| Q |
209 |
tgggatgttgttgatggagatggcaagtagaaggaggaacttgaat |
254 |
Q |
| |
|
||| ||| | ||||| || || ||||||||||| || || |||||| |
|
|
| T |
9432913 |
tggaatgcttttgattgaaatcgcaagtagaagaagaaatttgaat |
9432958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 237
Target Start/End: Original strand, 9318166 - 9318394
Alignment:
| Q |
9 |
tttgatataaagcctcataacatccttcttgatgaaaatttcaatccaaaagtttctgattttggacttgctagactctgtcctacagataaaagcattg |
108 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||||| || || | ||| |||||||| || ||||| || || | || | ||| | || | ||||||| |
|
|
| T |
9318166 |
tttgatatcaagccccataacatccttcttgatgagaactttattcccaaagtttcagactttggtctggcaaagctttatccaaatgacattagcattg |
9318265 |
T |
|
| Q |
109 |
tgtcattaactgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgtatatagttt |
208 |
Q |
| |
|
| | ||||||||||| ||||| || ||||||||||||||||||||| | ||||||| |||| |||| | |||| ||||| || ||||||||||| || |
|
|
| T |
9318266 |
tcactttaactgcagctagaggaacaattggatacatggctcctgaattgttctacaaaaatattggaggagtatcctacaaggccgatgtatatagctt |
9318365 |
T |
|
| Q |
209 |
tgggatgttgttgatggagatggcaagta |
237 |
Q |
| |
|
||| ||| | |||||||| |||||||||| |
|
|
| T |
9318366 |
tggaatgcttttgatggaaatggcaagta |
9318394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 237
Target Start/End: Complemental strand, 9350453 - 9350225
Alignment:
| Q |
9 |
tttgatataaagcctcataacatccttcttgatgaaaatttcaatccaaaagtttctgattttggacttgctagactctgtcctacagataaaagcattg |
108 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||||| || || | || |||||||| || ||||| ||||||| || | ||||| || | ||||||| |
|
|
| T |
9350453 |
tttgatatcaagccccataacatccttcttgatgagaactttatccccaaagtttcagactttggtcttgctaagctttatcctaatgagattagcattg |
9350354 |
T |
|
| Q |
109 |
tgtcattaactgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgtatatagttt |
208 |
Q |
| |
|
| | ||||||||||||||||| || |||||||| ||||||||||| | ||||||| |||| |||| | |||| ||||| |||||||||||||| || |
|
|
| T |
9350353 |
tcactttaactgcagcaagaggaacaattggatatatggctcctgagttgttctacaaaaatattggaggagtatcctacaaggctgatgtatatagctt |
9350254 |
T |
|
| Q |
209 |
tgggatgttgttgatggagatggcaagta |
237 |
Q |
| |
|
|| ||| | |||||||| || ||||||| |
|
|
| T |
9350253 |
cggaatgcttttgatggaaatcgcaagta |
9350225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 8999902 - 8999663
Alignment:
| Q |
4 |
tacactttgatataaagcctcataacatccttcttgatgaaaatttcaatccaaaagtttctgattttggacttgctagactctgtcctacagataaaag |
103 |
Q |
| |
|
|||| |||||||| |||||||| |||||||||||||||||||| |||| |||||||| ||||| || ||| | |||| || | ||| || || || |
|
|
| T |
8999902 |
tacattttgatatcaagcctcacaacatccttcttgatgaaaacttcacaccaaaagtctctgacttcggattggctaagctatatcccgtggagaatag |
8999803 |
T |
|
| Q |
104 |
cattgtgtcattaactgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgtatat |
203 |
Q |
| |
|
|||||| || | ||||| |||||||| ||||||||||| |||||||| ||| | ||||| | |||| |||| | | ||||| || |||||||| ||| |
|
|
| T |
8999802 |
cattgtcacaatgactgcggcaagaggtaccattggatatatggctccagaattgttctataaaaatattgggggagtgtcttataaggctgatgtttat |
8999703 |
T |
|
| Q |
204 |
agttttgggatgttgttgatggagatggcaagtagaagga |
243 |
Q |
| |
|
|| ||||||||| | ||||||||||||||| ||| ||||| |
|
|
| T |
8999702 |
agctttgggatgcttttgatggagatggcaggtaaaagga |
8999663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 117 - 235
Target Start/End: Original strand, 9082523 - 9082641
Alignment:
| Q |
117 |
actgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgtatatagttttgggatgt |
216 |
Q |
| |
|
|||||||||||||| || |||||||| ||||||||||| ||||||||| |||| | || | | || ||||| |||||||| ||||||||||||||| |
|
|
| T |
9082523 |
actgcagcaagaggtacaattggatatatggctcctgagttattctacaaaaatatagggggagtgtcgtacaaggctgatgtttatagttttgggatgc |
9082622 |
T |
|
| Q |
217 |
tgttgatggagatggcaag |
235 |
Q |
| |
|
| ||||||||||||||||| |
|
|
| T |
9082623 |
ttttgatggagatggcaag |
9082641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 238
Target Start/End: Complemental strand, 9399866 - 9399637
Alignment:
| Q |
9 |
tttgatataaagcctcataacatccttcttgatgaaaatttcaatccaaaagtttctgattttggacttgctagactctgtcctacagataaaagcattg |
108 |
Q |
| |
|
|||||||| |||||||| |||||||||||||| |||||||||| || |||||||| || ||||| ||||| | || | ||||| || |||||||||| |
|
|
| T |
9399866 |
tttgatattaagcctcacaacatccttcttgacgaaaatttcatccctaaagtttcggactttggtcttgcaaagctttatcctattgacaaaagcattg |
9399767 |
T |
|
| Q |
109 |
tgtcattaactgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgtatatagttt |
208 |
Q |
| |
|
| || | ||||||||||| || ||||| ||||||||||||||||| |||| | |||| |||| |||||| || || |||||||| ||||| || |
|
|
| T |
9399766 |
ccactttgatggcagcaagaggaacaattggttacatggctcctgaactgttcttccaaaatattgggggaatatcatataaggctgatgtgtatagctt |
9399667 |
T |
|
| Q |
209 |
tgggatgttgttgatggagatggcaagtag |
238 |
Q |
| |
|
||| ||| | ||||| || || |||||||| |
|
|
| T |
9399666 |
tggtatgcttttgattgaaattgcaagtag |
9399637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 243
Target Start/End: Original strand, 8873944 - 8874178
Alignment:
| Q |
9 |
tttgatataaagcctcataacatccttcttgatgaaaatttcaatccaaaagtttctgattttggacttgctagactctgtcctacagataaaagcattg |
108 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||| || || | ||| ||||| ||||| |||||| | |||| || | |||| || || ||||||| |
|
|
| T |
8873944 |
tttgatattaagcctcacaacatccttcttgatgagaactttactccgaaagtctctgactttggattggctaagctatatcctgtggagaatagcattg |
8874043 |
T |
|
| Q |
109 |
tgtcattaactgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgtatatagttt |
208 |
Q |
| |
|
| || | ||||| |||||||| ||||||||||| |||||||| ||| | || || | |||| |||| | | || || || |||||||| |||||||| |
|
|
| T |
8874044 |
tcacaatgactgcggcaagaggtaccattggatatatggctccagaattgttttataaaaatattggtggagtgtcctataaggctgatgtttatagttt |
8874143 |
T |
|
| Q |
209 |
tgggatgttgttgatggagatggcaagtagaagga |
243 |
Q |
| |
|
||||||| | ||||||| ||||||| ||| ||||| |
|
|
| T |
8874144 |
tgggatgcttttgatggtgatggcaggtaaaagga |
8874178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 9384467 - 9384225
Alignment:
| Q |
1 |
ttctacactttgatataaagcctcataacatccttcttgatgaaaatttcaatccaaaagtttctgattttggacttgctagactctgtcctacagataa |
100 |
Q |
| |
|
||||||| |||||||| ||||||||||| || ||||| || ||| | || |||||| ||||| |||||||||||||| | || | |||| | | |
|
|
| T |
9384467 |
ttctacattttgatatcaagcctcataatattcttctagacgaagagtttgttccaaaggtttcggattttggacttgcaaagctatatcctgtgaacga |
9384368 |
T |
|
| Q |
101 |
aagcattgtgtcattaactgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgta |
200 |
Q |
| |
|
|||||||| | |||||||| |||||||| || | || ||||||||||||||||| ||||||| |||| |||| | | |||||||| ||||||||| |
|
|
| T |
9384367 |
tagcattgttaccttaactgcggcaagaggaactttgggttacatggctcctgaactgttctacaaaaatattggtggagtgtcttacaaggctgatgta |
9384268 |
T |
|
| Q |
201 |
tatagttttgggatgttgttgatggagatggcaagtagaagga |
243 |
Q |
| |
|
||||| ||||| ||| | |||||||| |||||| ||| ||||| |
|
|
| T |
9384267 |
tatagctttggaatgcttttgatggaaatggcaggtaaaagga |
9384225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 255
Target Start/End: Complemental strand, 9488784 - 9488538
Alignment:
| Q |
9 |
tttgatataaagcctcataacatccttcttgatgaaaatttcaatccaaaagtttctgattttggacttgctagactctgtcctacagataaaagcattg |
108 |
Q |
| |
|
||||| ||||||||||||||||| |||||||| | ||| |||| |||||| ||||| |||||| |||| || | | | ||| || || || ||||||| |
|
|
| T |
9488784 |
tttgacataaagcctcataacattcttcttgacgtaaacttcactccaaaggtttcagattttagactagcaaagttatatccaacggacaatagcattg |
9488685 |
T |
|
| Q |
109 |
tgtcattaactgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgtatatagttt |
208 |
Q |
| |
|
|||| | || || |||||||| || || ||||||||||| || ||| | ||||| | ||| |||| | |||| |||||||| ||||| ||||| || |
|
|
| T |
9488684 |
tgtctcttacagctgcaagaggaactatgggatacatggcaccagaattgttctataagaatattggaggagtatcgtacaaagcagatgtttatagctt |
9488585 |
T |
|
| Q |
209 |
tgggatgttgttgatggagatggcaagtagaaggaggaacttgaatg |
255 |
Q |
| |
|
||| |||||||| ||||| ||||| ||||| || |||||| |||||| |
|
|
| T |
9488584 |
tggaatgttgttaatggaaatggcgagtaggagaaggaacatgaatg |
9488538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 9233927 - 9234159
Alignment:
| Q |
1 |
ttctacactttgatataaagcctcataacatccttcttgatgaaaatttcaatccaaaagtttctgattttggacttgctagactctgtcctacagataa |
100 |
Q |
| |
|
||||||| |||||||| ||||||||||| || ||||| || ||| ||||| |||||| ||||| |||||||||||||| | || | ||| | | |
|
|
| T |
9233927 |
ttctacattttgatatcaagcctcataatattcttctagacgaagatttcgttccaaaggtttcggattttggacttgcaaagctttaccctgtgaacga |
9234026 |
T |
|
| Q |
101 |
aagcattgtgtcattaactgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgta |
200 |
Q |
| |
|
|||||||| | |||||||| |||||||| || | || ||||||||||||||| | ||||||| |||| |||| | | || ||||||||||||||| |
|
|
| T |
9234027 |
tagcattgttccgttaactgcggcaagaggaactttgggttacatggctcctgaattgttctacaaaaatattggtggagtgtcgtacaaagctgatgta |
9234126 |
T |
|
| Q |
201 |
tatagttttgggatgttgttgatggagatggca |
233 |
Q |
| |
|
|| |||||||| ||| | |||||||| |||||| |
|
|
| T |
9234127 |
tacagttttggaatgcttttgatggaaatggca |
9234159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 237
Target Start/End: Original strand, 9255009 - 9255132
Alignment:
| Q |
114 |
ttaactgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgtatatagttttggga |
213 |
Q |
| |
|
||||| |||||||| ||||| ||||||||||||||||||||| | |||||| |||| |||| | |||| ||||| || ||||||||||| ||||| | |
|
|
| T |
9255009 |
ttaaccgcagcaagggggacaattggatacatggctcctgaattgttctaccaaaatattggaggagtatcgtacaaggccgatgtatatagctttggaa |
9255108 |
T |
|
| Q |
214 |
tgttgttgatggagatggcaagta |
237 |
Q |
| |
|
|| | ||||| || |||||||||| |
|
|
| T |
9255109 |
tgcttttgattgaaatggcaagta |
9255132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 233
Target Start/End: Original strand, 9096793 - 9096909
Alignment:
| Q |
117 |
actgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgtatatagttttgggatgt |
216 |
Q |
| |
|
||||| |||||||| || |||||||| |||||||| ||| | ||||||| |||| |||| | | || || ||||||||||| ||||| ||||||||| |
|
|
| T |
9096793 |
actgctgcaagaggtacaattggatatatggctccagaattgttctacaaaaatattgggggagtttcctataaagctgatgtttatagctttgggatgc |
9096892 |
T |
|
| Q |
217 |
tgttgatggagatggca |
233 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
9096893 |
ttttgatggagatggca |
9096909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 9464352 - 9464285
Alignment:
| Q |
9 |
tttgatataaagcctcataacatccttcttgatgaaaatttcaatccaaaagtttctgattttggact |
76 |
Q |
| |
|
||||| ||||||||||||||||| |||||||| | ||| |||| |||||| ||||| |||||| |||| |
|
|
| T |
9464352 |
tttgacataaagcctcataacattcttcttgacgtaaacttcactccaaaggtttcggatttttgact |
9464285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 283
Target Start/End: Original strand, 10993818 - 10993856
Alignment:
| Q |
245 |
gaacttgaatgcaatggctgagcaatctagccaaattta |
283 |
Q |
| |
|
||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
10993818 |
gaacttgaatgcattagctgagcaatctagccaaattta |
10993856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 237
Target Start/End: Original strand, 15927072 - 15927300
Alignment:
| Q |
9 |
tttgatataaagcctcataacatccttcttgatgaaaatttcaatccaaaagtttctgattttggacttgctagactctgtcctacagataaaagcattg |
108 |
Q |
| |
|
||||| || ||||| |||||||||||||||||||| || || | || |||||||| || ||||| ||||| | || | ||||| || | || |||| |
|
|
| T |
15927072 |
tttgacatcaagccccataacatccttcttgatgagaactttatccccaaagtttccgactttggtcttgcaaagctttatcctaatgagattagtattg |
15927171 |
T |
|
| Q |
109 |
tgtcattaactgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgtatatagttt |
208 |
Q |
| |
|
| | ||||||||||||||||| || ||||||||||||||||||||| ||||||||| |||| |||| | | || || || || ||||||||||| || |
|
|
| T |
15927172 |
tcactttaactgcagcaagaggaacgattggatacatggctcctgaattattctacaaaaatattggaggagtttcgtataaggccgatgtatatagctt |
15927271 |
T |
|
| Q |
209 |
tgggatgttgttgatggagatggcaagta |
237 |
Q |
| |
|
||| ||| | |||||||| |||||||||| |
|
|
| T |
15927272 |
tggaatgcttttgatggaaatggcaagta |
15927300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 9159721 - 9159598
Alignment:
| Q |
114 |
ttaactgcagcaagagggaccattggatacatggctcctgaactattctacagaaatgttggcacaatatcttacaaagctgatgtatatagttttggga |
213 |
Q |
| |
|
||||||||||||||||| || ||||| || |||||||| || | ||||||| |||| |||| | |||| ||||| |||||||| ||||||||||| | |
|
|
| T |
9159721 |
ttaactgcagcaagaggaacaattggttatatggctcccgagttgttctacaaaaatattggtggagtatcatacaaggctgatgtttatagttttggaa |
9159622 |
T |
|
| Q |
214 |
tgttgttgatggagatggcaagta |
237 |
Q |
| |
|
|| | |||||||| |||||||||| |
|
|
| T |
9159621 |
tgcttttgatggaaatggcaagta |
9159598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 40225285 - 40225245
Alignment:
| Q |
39 |
gatgaaaatttcaatccaaaagtttctgattttggacttgc |
79 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
40225285 |
gatgaaaatttcaatccaaaactctctgattttggacttgc |
40225245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 27692659 - 27692614
Alignment:
| Q |
4 |
tacactttgatataaagcctcataacatccttcttgatgaaaattt |
49 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||| || ||||| |
|
|
| T |
27692659 |
tacactttgatataaaacctcataacattcttcttgacgagaattt |
27692614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 7945893 - 7945933
Alignment:
| Q |
39 |
gatgaaaatttcaatccaaaagtttctgattttggacttgc |
79 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| ||||| |
|
|
| T |
7945893 |
gatgaaaatttcaatccaaagctttctgattttggtcttgc |
7945933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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