View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21662_low_25 (Length: 271)
Name: NF21662_low_25
Description: NF21662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21662_low_25 |
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Alignment Details
Target: chr8 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 13 - 269
Target Start/End: Original strand, 7446224 - 7446488
Alignment:
| Q |
13 |
tcaaatgtgatagtgccttctttaccatagtgtcttggcacgggttaaaccgccttacaatatgttagtagtacaccaactgtttctagctgtcatgaga |
112 |
Q |
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| T |
7446224 |
tcaaatgtgatagtgtcttctttaccatagtgtcttggcacgggctaaaccgccttacgatatgttagtagtacaccaactgtttctagctgtcatgaga |
7446323 |
T |
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| Q |
113 |
ggtgattttcacaagttgcctcatgttttgatcagaattcaacattgaaaatcggttttccatttcaacaaatcgcctcacaaatttctgtgaaaccaat |
212 |
Q |
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| T |
7446324 |
ggtgattttcacaagttgcctcatggtctgatcagaattgaacattgaaaatcggttttccatttcaacaagtcgcctcacaattttctctgaaaccaat |
7446423 |
T |
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| Q |
213 |
tttcaa--------aattcatcaattttgagtcatgatttcaacaataatcatactaacgatgat |
269 |
Q |
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| T |
7446424 |
tttcaaaattcatcaattcatcaattttgagtcatgatttcaacaataatcatactaaagatgat |
7446488 |
T |
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