View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21662_low_4 (Length: 692)

Name: NF21662_low_4
Description: NF21662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21662_low_4
NF21662_low_4
[»] chr4 (55 HSPs)
chr4 (207-676)||(6542956-6543434)
chr4 (435-665)||(6737583-6737813)
chr4 (14-153)||(25704651-25704790)
chr4 (8-153)||(24706379-24706524)
chr4 (14-153)||(21310425-21310564)
chr4 (8-153)||(14261044-14261189)
chr4 (14-153)||(12071561-12071700)
chr4 (14-153)||(22321405-22321544)
chr4 (8-153)||(40122617-40122762)
chr4 (14-153)||(34324720-34324860)
chr4 (8-153)||(44568837-44568982)
chr4 (8-158)||(21661667-21661817)
chr4 (8-158)||(21670431-21670581)
chr4 (8-146)||(50767871-50768009)
chr4 (14-156)||(20249151-20249292)
chr4 (14-151)||(31892240-31892373)
chr4 (341-425)||(6736057-6736141)
chr4 (38-153)||(1988036-1988150)
chr4 (24-156)||(26676714-26676846)
chr4 (16-105)||(20714488-20714577)
chr4 (16-102)||(32543532-32543617)
chr4 (21-153)||(6129093-6129225)
chr4 (16-153)||(19692723-19692860)
chr4 (16-153)||(19703308-19703445)
chr4 (472-532)||(6503166-6503226)
chr4 (291-430)||(6523998-6524137)
chr4 (30-93)||(34284171-34284234)
chr4 (475-532)||(6506673-6506730)
chr4 (16-105)||(48652268-48652356)
chr4 (125-160)||(19433351-19433386)
chr4 (435-545)||(6594015-6594125)
chr4 (100-138)||(19361662-19361700)
chr4 (16-85)||(18507404-18507472)
chr4 (14-81)||(21064834-21064899)
chr4 (125-157)||(55209808-55209840)
chr4 (125-156)||(2760961-2760992)
chr4 (381-540)||(6646090-6646249)
chr4 (480-539)||(6747960-6748019)
chr4 (125-155)||(2760728-2760758)
chr4 (112-146)||(19362189-19362223)
chr4 (115-161)||(20249006-20249052)
chr4 (125-155)||(55209572-55209602)
chr4 (125-153)||(4467520-4467548)
chr4 (634-670)||(6593899-6593935)
chr4 (115-155)||(12071799-12071839)
chr4 (125-153)||(26169986-26170014)
chr4 (125-153)||(26170221-26170249)
chr4 (125-153)||(29830343-29830371)
chr4 (125-153)||(35381128-35381156)
chr4 (125-153)||(38416650-38416678)
chr4 (125-153)||(38416884-38416912)
chr4 (125-153)||(44232077-44232105)
chr4 (125-153)||(45292066-45292094)
chr4 (125-153)||(47386520-47386548)
chr4 (16-56)||(51777715-51777755)
[»] chr1 (47 HSPs)
chr1 (8-156)||(23045411-23045559)
chr1 (18-156)||(284330-284468)
chr1 (8-153)||(40783789-40783934)
chr1 (14-154)||(321625-321765)
chr1 (8-161)||(47037984-47038135)
chr1 (14-154)||(24772043-24772183)
chr1 (14-152)||(27211102-27211240)
chr1 (14-153)||(23526240-23526379)
chr1 (14-146)||(46771644-46771776)
chr1 (14-133)||(33082765-33082884)
chr1 (14-138)||(52037260-52037382)
chr1 (14-155)||(1749305-1749446)
chr1 (16-157)||(51064893-51065037)
chr1 (100-155)||(41959076-41959131)
chr1 (100-153)||(3943060-3943113)
chr1 (100-153)||(9588670-9588723)
chr1 (25-102)||(1837978-1838053)
chr1 (12-94)||(7765072-7765154)
chr1 (100-153)||(13984991-13985044)
chr1 (16-105)||(31003926-31004012)
chr1 (24-153)||(40261419-40261549)
chr1 (31-105)||(3657125-3657199)
chr1 (16-105)||(52478016-52478103)
chr1 (112-153)||(44227848-44227889)
chr1 (16-103)||(27143151-27143239)
chr1 (16-94)||(18396754-18396832)
chr1 (112-158)||(41959809-41959855)
chr1 (112-153)||(3943763-3943804)
chr1 (16-85)||(31061594-31061662)
chr1 (28-93)||(40562733-40562797)
chr1 (100-153)||(44228228-44228281)
chr1 (16-154)||(34458863-34459000)
chr1 (87-139)||(40564241-40564293)
chr1 (112-153)||(9589631-9589672)
chr1 (70-105)||(14351954-14351989)
chr1 (100-145)||(1168369-1168414)
chr1 (125-154)||(16120674-16120703)
chr1 (125-161)||(40772006-40772043)
chr1 (125-153)||(6402644-6402672)
chr1 (121-153)||(10845481-10845513)
chr1 (125-153)||(11641067-11641095)
chr1 (122-154)||(13984436-13984468)
chr1 (125-153)||(30701718-30701746)
chr1 (125-153)||(36399332-36399360)
chr1 (125-153)||(36757486-36757514)
chr1 (125-153)||(40771772-40771800)
chr1 (125-153)||(52024260-52024288)
[»] chr6 (35 HSPs)
chr6 (8-153)||(29260192-29260337)
chr6 (14-153)||(1605579-1605718)
chr6 (8-154)||(8626481-8626627)
chr6 (8-146)||(30734615-30734753)
chr6 (14-153)||(13757208-13757347)
chr6 (14-153)||(7761301-7761438)
chr6 (14-153)||(15064832-15064971)
chr6 (14-138)||(31559874-31559998)
chr6 (8-155)||(4129433-4129572)
chr6 (8-153)||(17942443-17942590)
chr6 (14-153)||(8235624-8235763)
chr6 (38-147)||(30734772-30734879)
chr6 (16-102)||(21277574-21277659)
chr6 (100-153)||(19996715-19996768)
chr6 (23-105)||(3798151-3798233)
chr6 (16-153)||(14286989-14287125)
chr6 (21-102)||(11370630-11370711)
chr6 (112-153)||(19996322-19996363)
chr6 (125-161)||(4147923-4147959)
chr6 (125-156)||(25476042-25476073)
chr6 (115-153)||(15064695-15064733)
chr6 (115-153)||(17942682-17942720)
chr6 (68-153)||(1814595-1814680)
chr6 (125-154)||(22055006-22055035)
chr6 (125-158)||(32671811-32671844)
chr6 (62-95)||(33845469-33845502)
chr6 (125-153)||(18668688-18668716)
chr6 (125-153)||(18668922-18668950)
chr6 (125-153)||(19087958-19087986)
chr6 (125-153)||(19088192-19088220)
chr6 (125-153)||(20437017-20437045)
chr6 (125-153)||(24623941-24623969)
chr6 (16-56)||(30235447-30235487)
chr6 (125-153)||(32414913-32414941)
chr6 (125-153)||(32420754-32420782)
[»] chr7 (36 HSPs)
chr7 (14-153)||(10981508-10981647)
chr7 (8-153)||(27813811-27813956)
chr7 (8-151)||(36453256-36453399)
chr7 (14-153)||(40348960-40349099)
chr7 (14-155)||(47110449-47110588)
chr7 (8-155)||(25614485-25614630)
chr7 (21-105)||(3091565-3091649)
chr7 (100-153)||(25060133-25060186)
chr7 (21-105)||(7743542-7743625)
chr7 (14-93)||(27942177-27942256)
chr7 (100-153)||(2911548-2911601)
chr7 (24-95)||(16360442-16360511)
chr7 (16-103)||(16662146-16662231)
chr7 (16-103)||(17636506-17636591)
chr7 (14-95)||(3498892-3498973)
chr7 (16-130)||(37983179-37983289)
chr7 (33-147)||(8379948-8380063)
chr7 (112-147)||(25059456-25059491)
chr7 (125-160)||(41898222-41898257)
chr7 (125-156)||(47156024-47156055)
chr7 (125-159)||(28061509-28061543)
chr7 (125-159)||(46103364-46103398)
chr7 (112-153)||(2910859-2910900)
chr7 (25-62)||(28200298-28200335)
chr7 (125-154)||(36623307-36623336)
chr7 (129-162)||(48602427-48602460)
chr7 (125-153)||(16778505-16778533)
chr7 (125-153)||(20885103-20885131)
chr7 (125-153)||(25566548-25566576)
chr7 (125-153)||(28061749-28061777)
chr7 (125-153)||(36623542-36623570)
chr7 (125-153)||(38852081-38852109)
chr7 (125-153)||(41897988-41898016)
chr7 (125-153)||(42877386-42877414)
chr7 (125-153)||(46103597-46103625)
chr7 (125-153)||(47156261-47156289)
[»] scaffold1431 (1 HSPs)
scaffold1431 (8-153)||(31-176)
[»] chr8 (43 HSPs)
chr8 (8-153)||(11174355-11174500)
chr8 (8-153)||(40058435-40058580)
chr8 (14-153)||(2540069-2540208)
chr8 (18-153)||(3585451-3585586)
chr8 (8-154)||(43275531-43275675)
chr8 (8-154)||(37345570-37345716)
chr8 (8-153)||(11646457-11646602)
chr8 (8-153)||(7146913-7147058)
chr8 (8-153)||(40918863-40919006)
chr8 (14-146)||(30999661-30999791)
chr8 (8-161)||(36068072-36068225)
chr8 (14-155)||(27034995-27035135)
chr8 (8-155)||(20546421-20546566)
chr8 (21-153)||(28562421-28562554)
chr8 (100-160)||(45278701-45278761)
chr8 (16-95)||(13881094-13881174)
chr8 (100-153)||(8697898-8697951)
chr8 (100-153)||(41307961-41308014)
chr8 (16-105)||(28326797-28326883)
chr8 (16-151)||(35866616-35866751)
chr8 (14-105)||(37510314-37510405)
chr8 (100-154)||(40486453-40486507)
chr8 (100-153)||(10646592-10646645)
chr8 (21-153)||(28567919-28568051)
chr8 (21-153)||(28575512-28575644)
chr8 (21-94)||(10181002-10181074)
chr8 (112-153)||(41305762-41305803)
chr8 (115-159)||(40918725-40918769)
chr8 (16-95)||(39151464-39151542)
chr8 (115-161)||(7147152-7147198)
chr8 (16-103)||(30906828-30906917)
chr8 (125-159)||(32998674-32998708)
chr8 (125-154)||(132016-132045)
chr8 (115-160)||(43275392-43275437)
chr8 (112-153)||(45278013-45278053)
chr8 (125-153)||(616783-616811)
chr8 (125-153)||(617017-617045)
chr8 (125-153)||(623176-623204)
chr8 (125-153)||(623410-623438)
chr8 (121-153)||(5878317-5878349)
chr8 (125-153)||(14237514-14237542)
chr8 (125-153)||(40494618-40494646)
chr8 (125-153)||(42587482-42587510)
[»] chr3 (50 HSPs)
chr3 (8-153)||(13364843-13364988)
chr3 (8-157)||(46694242-46694391)
chr3 (8-156)||(198852-199000)
chr3 (8-153)||(19241800-19241945)
chr3 (8-154)||(36881281-36881425)
chr3 (8-154)||(23088063-23088209)
chr3 (8-153)||(3383076-3383221)
chr3 (14-153)||(29375138-29375277)
chr3 (14-153)||(43750137-43750276)
chr3 (49-146)||(32835129-32835226)
chr3 (32-153)||(13702769-13702890)
chr3 (75-153)||(27707363-27707441)
chr3 (100-153)||(12094582-12094635)
chr3 (16-101)||(19897067-19897152)
chr3 (100-154)||(19911508-19911562)
chr3 (68-153)||(37293437-37293522)
chr3 (21-94)||(37780996-37781069)
chr3 (100-153)||(44277455-44277508)
chr3 (100-153)||(38805245-38805298)
chr3 (68-136)||(48820444-48820512)
chr3 (112-158)||(44276770-44276816)
chr3 (84-153)||(48963156-48963223)
chr3 (16-130)||(54086577-54086690)
chr3 (25-102)||(1455297-1455374)
chr3 (112-153)||(19912174-19912215)
chr3 (8-65)||(27707120-27707177)
chr3 (112-153)||(38806341-38806382)
chr3 (16-143)||(18356007-18356134)
chr3 (125-159)||(19823894-19823928)
chr3 (16-146)||(53559750-53559880)
chr3 (100-153)||(4235751-4235803)
chr3 (112-153)||(12095423-12095464)
chr3 (24-87)||(17755221-17755284)
chr3 (24-87)||(19056541-19056604)
chr3 (25-103)||(44522491-44522567)
chr3 (125-155)||(13499569-13499599)
chr3 (16-94)||(24064283-24064361)
chr3 (8-105)||(26105079-26105176)
chr3 (125-155)||(42761717-42761747)
chr3 (16-94)||(52805166-52805244)
chr3 (21-62)||(6901655-6901696)
chr3 (125-162)||(20765187-20765224)
chr3 (100-144)||(4226716-4226759)
chr3 (125-153)||(6910568-6910596)
chr3 (125-153)||(20765430-20765458)
chr3 (125-153)||(27010474-27010502)
chr3 (125-153)||(27010708-27010736)
chr3 (125-153)||(42490430-42490458)
chr3 (125-153)||(42761483-42761511)
chr3 (127-159)||(44562020-44562052)
[»] chr2 (30 HSPs)
chr2 (8-153)||(39938170-39938315)
chr2 (8-152)||(23366790-23366934)
chr2 (14-153)||(3518908-3519047)
chr2 (8-153)||(1102503-1102648)
chr2 (26-153)||(37673887-37674014)
chr2 (14-153)||(12969877-12970016)
chr2 (8-125)||(1646317-1646432)
chr2 (14-76)||(22388273-22388335)
chr2 (100-153)||(34224378-34224431)
chr2 (16-94)||(14779838-14779914)
chr2 (38-105)||(35179097-35179164)
chr2 (16-105)||(18078104-18078193)
chr2 (16-105)||(19976380-19976468)
chr2 (26-153)||(39562037-39562162)
chr2 (16-143)||(1002870-1002997)
chr2 (16-102)||(32840312-32840401)
chr2 (115-156)||(12969737-12969778)
chr2 (125-160)||(11841586-11841621)
chr2 (125-159)||(5405230-5405264)
chr2 (115-153)||(40756911-40756949)
chr2 (125-154)||(44365391-44365420)
chr2 (125-153)||(2183191-2183219)
chr2 (125-153)||(7608283-7608311)
chr2 (125-161)||(8042014-8042050)
chr2 (125-153)||(8042256-8042284)
chr2 (125-157)||(13125141-13125173)
chr2 (125-153)||(19141066-19141094)
chr2 (125-153)||(19141300-19141328)
chr2 (125-153)||(39358146-39358174)
chr2 (125-157)||(39358401-39358433)
[»] chr5 (30 HSPs)
chr5 (8-156)||(30720624-30720772)
chr5 (14-153)||(12806991-12807130)
chr5 (14-153)||(25773649-25773788)
chr5 (8-153)||(10285189-10285334)
chr5 (8-153)||(40886742-40886887)
chr5 (8-160)||(36561231-36561383)
chr5 (14-153)||(37900762-37900901)
chr5 (14-142)||(7277560-7277688)
chr5 (14-115)||(25683366-25683467)
chr5 (19-153)||(16983258-16983393)
chr5 (16-164)||(734478-734625)
chr5 (16-105)||(30403101-30403191)
chr5 (16-153)||(39070883-39071020)
chr5 (16-159)||(11319553-11319696)
chr5 (28-103)||(23098386-23098461)
chr5 (104-153)||(15305216-15305265)
chr5 (16-93)||(1056422-1056498)
chr5 (125-162)||(8086264-8086301)
chr5 (112-153)||(15304822-15304863)
chr5 (45-153)||(11796451-11796559)
chr5 (16-94)||(16054173-16054249)
chr5 (125-156)||(33387453-33387484)
chr5 (115-153)||(25683229-25683267)
chr5 (125-154)||(978311-978340)
chr5 (125-162)||(40156189-40156226)
chr5 (125-153)||(978077-978105)
chr5 (125-153)||(9502627-9502655)
chr5 (125-153)||(14634157-14634185)
chr5 (127-155)||(24992374-24992402)
chr5 (115-159)||(40886604-40886648)
[»] scaffold0054 (2 HSPs)
scaffold0054 (14-153)||(45454-45593)
scaffold0054 (115-156)||(45692-45733)
[»] scaffold1770 (1 HSPs)
scaffold1770 (8-155)||(168-307)
[»] scaffold0062 (1 HSPs)
scaffold0062 (14-138)||(403-525)
[»] scaffold0056 (1 HSPs)
scaffold0056 (16-103)||(70874-70961)
[»] scaffold0257 (2 HSPs)
scaffold0257 (100-153)||(23467-23520)
scaffold0257 (112-156)||(23872-23916)
[»] scaffold0025 (1 HSPs)
scaffold0025 (14-87)||(65301-65375)
[»] scaffold0022 (1 HSPs)
scaffold0022 (125-155)||(100645-100675)
[»] scaffold0018 (1 HSPs)
scaffold0018 (127-159)||(67764-67796)


Alignment Details
Target: chr4 (Bit Score: 315; Significance: 1e-177; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 207 - 676
Target Start/End: Complemental strand, 6543434 - 6542956
Alignment:
Q  207 ttcagttggtcatttcttctttttctatttcactttaaccaatattcatcaaatccatccatgtcttctactaccaatcctcct---------tacaatg 297  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||             ||| | |    
T  6543434 ttcagttggtcatttcttcttttgctatttcactttaaccaatattcatcaaatccatccatgtcttctactaccaatccaaagagaaagagctacgacg 6543335  T
Q  298 tgtacttgggtttctgtgatgaagatgcgggttcttttgctttggaactctatacagctcttagttcagaagctggaatcatagttttctgggacaatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||| || |    
T  6543334 tgtacttgggtttctgtgatgaagatgcgggttcttttgctttggaactctatacagctcttagttcacaagctgaaatcattgttttctgggacgatta 6543235  T
Q  398 gaggattggaagtggagatcaagaaataccaacatccgtgctgaatgtcattgaacattgcaaacttggtgtagtcatattatcaaagaattatacgaat 497  Q
     |||||||||  ||||||||||||| ||||||| || ||||||||||| |||| | ||| |||| ||| |||||||||||||||||||||||||||| ||    
T  6543234 caggattggatttggagatcaagaagtaccaacctcggtgctgaatgtgattgcagattccaaagttgttgtagtcatattatcaaagaattatacgcat 6543135  T
Q  498 tcaagatggtgtcttcaagaactggagaaaataactgagtgttaccgagccaaagatggacccgttgttttacctgttttctatgatggtgtccattccc 597  Q
    || |||||||||||||||||| |||||||||||||  ||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  6543134 tctagatggtgtcttcaagaattggagaaaataacccagtgttaccgaaccaaagatggtcccgttgttttacctgtgttctatgatggtgtccattccc 6543035  T
Q  598 ccagtagaatattgcaggaagatatgtatggagaggcttttcatgattttctggatagaatctcaatgaaggagaaaac 676  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6543034 ccagtagaatattgcaggaagatatgtatggagaggcttttcatgattttctggatagaatttcaatgaaggagaaaac 6542956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 435 - 665
Target Start/End: Original strand, 6737583 - 6737813
Alignment:
Q  435 gtgctgaatgtcattgaacattgcaaacttggtgtagtcatattatcaaagaattatacgaattcaagatggtgtcttcaagaactggagaaaataactg 534  Q
    ||||||||||| |||||| |||||||| ||| ||||||| ||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||    
T  6737583 gtgctgaatgtgattgaagattgcaaagttgttgtagtcgtattatcaaagaattatactaattctagatggtgtcttcaagaattggagaaaataactg 6737682  T
Q  535 agtgttaccgagccaaagatggacccgttgttttacctgttttctatgatggtgtccattcccccagtagaatattgcaggaagatatgtatggagaggc 634  Q
    ||||||||||| | |||||||| ||| ||||||||||| | ||||||||||||||| |||||||||  |||| |||||||||||||||||  ||||||||    
T  6737683 agtgttaccgaactaaagatggtcccattgttttacctttgttctatgatggtgtctattcccccaacagaagattgcaggaagatatgttcggagaggc 6737782  T
Q  635 ttttcatgattttctggatagaatctcaatg 665  Q
    ||| ||| |||||||||||||||||||||||    
T  6737783 tttacataattttctggatagaatctcaatg 6737813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 25704790 - 25704651
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25704790 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 25704691  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25704690 tttctccaaaatggacatgtattttgaaacggagggagta 25704651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 24706379 - 24706524
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24706379 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 24706478  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  24706479 gtgcaatttctccaaaatggacatgtattttgaaacggatggagta 24706524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 21310564 - 21310425
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21310564 aaaaaaaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 21310465  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21310464 tttctccaaaatggacatgtattttgaaacggagggagta 21310425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 14261189 - 14261044
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14261189 gagaaaaaaataaaatgaaataataaattattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttggtta 14261090  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  14261089 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 14261044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 12071700 - 12071561
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  12071700 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttagtttattggttagtgcaa 12071601  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12071600 tttctccaaaatggacatgtattttgaaacggagggagta 12071561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 22321405 - 22321544
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22321405 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggtttcttggttagtgcaa 22321504  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  22321505 tttctccaaaatggacatgtattttgaaacggaaggagta 22321544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 40122617 - 40122762
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40122617 gagaaaaaaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggttttttggtta 40122716  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
     |||||||||||||||||||||||||||||||||||||||||||||    
T  40122717 ctgcaatttctccaaaatggacatgtattttgaaacggagggagta 40122762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 34324720 - 34324860
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaattt-atttggtttcttggttagtgca 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  34324720 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttaatttagtttcttggttagtgca 34324819  T
Q  113 atttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  34324820 atttctccaaaatggacatgtattttgaaacggagggagta 34324860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 44568982 - 44568837
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  44568982 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggttttttggtta 44568883  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||    
T  44568882 gtgcaatttcttcaaaatggacatgtattttgaaacggaaggagta 44568837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 8 - 158
Target Start/End: Original strand, 21661667 - 21661817
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21661667 gagaaaaaaataaaatgaaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataataaaatttatttggtttcttggtta 21661766  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaatatt 158  Q
     |||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  21661767 ctgcaatttctccaaaatggacatgtattttgaaagggagggagtattatt 21661817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 8 - 158
Target Start/End: Original strand, 21670431 - 21670581
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21670431 gagaaaaaaataaaatgaaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataaaaaaatttatttggtttcttggtta 21670530  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaatatt 158  Q
     |||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  21670531 ctgcaatttctccaaaatggacatgtattttgaaagggagggagtattatt 21670581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 50768009 - 50767871
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  50768009 gagaaaaaaataaaatgaaataataaattattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttgatta 50767910  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacgga 146  Q
    |||||||||||| |||||| | |||||||||||||||||    
T  50767909 gtgcaatttctctaaaatgaatatgtattttgaaacgga 50767871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 20249151 - 20249292
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||| ||| |||||||||||| |||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||| | |||    
T  20249151 aaaatagaataaaataataaatggttaagggtattatagaaa-cacacacataatttcttcaaaaataacaaaatttatttggtttcttggttaatacaa 20249249  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagtaata 156  Q
    ||| |||||||||||||||||||||||||||||| ||||||||    
T  20249250 tttatccaaaatggacatgtattttgaaacggagagagtaata 20249292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 31892373 - 31892240
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||| |||||||||||||||| | || ||||||||||||||||||    || ||||||||||||||| |||||||||||| ||||||||||| |||||    
T  31892373 aaaatagaatgaaataataaatggtcaaaggtattatagaaaacaca----taatttcatcaaaaataataaaatttatttgatttcttggttactgcaa 31892278  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggag 151  Q
    |||||  |||||| ||||||||||||| ||||||||||    
T  31892277 tttctttaaaatgaacatgtattttgatacggagggag 31892240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 341 - 425
Target Start/End: Original strand, 6736057 - 6736141
Alignment:
Q  341 ggaactctatacagctcttagttcagaagctggaatcatagttttctgggacaatgagaggattggaagtggagatcaagaaata 425  Q
    |||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  6736057 ggaactctatacggctcttagttcagaagttggaatcattgttttctgggacaatgagaggattggaagtggagatcgagaaata 6736141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 1988150 - 1988036
Alignment:
Q  38 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 137  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| |||||| |||| |||||||||||| |||| ||||| |||||    
T  1988150 ttaagggtattatagaaaacacatacataatttcatcaaaaataataaaatttatttgatttcttagttactgcaatttctcc-aaatagacatatattt 1988052  T
Q  138 tgaaacggagggagta 153  Q
    | |||| || ||||||    
T  1988051 taaaacagatggagta 1988036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 26676714 - 26676846
Alignment:
Q  24 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 123  Q
    |||||||||||||| |||||||||||||||||| ||||  | | |||||| |||||| |||| ||||||||| || ||||||  ||| ||||||| ||||    
T  26676714 gaaataataaatgagtaagggtattatagaaaaaacacgaagaatttcataaaaaatgacaacatttatttgattccttggtatgtgtaatttcttcaaa 26676813  T
Q  124 atggacatgtattttgaaacggagggagtaata 156  Q
    ||||| | ||||| |||||||||| ||||||||    
T  26676814 atggataagtattgtgaaacggagagagtaata 26676846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 20714488 - 20714577
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaa-cacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 105  Q
    |||| |||||||||||||||| |||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||| ||| |||||    
T  20714488 aatataatgaaataataaatggttaagg-tattatagaaaaacacacacatagtttcatcaaaaataacaaaatttatttgatttattggt 20714577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 32543617 - 32543532
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 102  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||| | | ||||||||||| |||||||| ||||||||||||||    
T  32543617 aataaaatgaaataataaatgattaagggtattata-aaaaaacacaaagaatttcatcaaaattaacaaaaattatttggtttctt 32543532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 21 - 153
Target Start/End: Original strand, 6129093 - 6129225
Alignment:
Q  21 aatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctcc 120  Q
    |||||||||||||||||||||||||||| ||||||| | ||| | | ||| |||||||||||||||||||||||| ||||||| |  ||| ||||||  |    
T  6129093 aatgaaataataaatgattaagggtattgtagaaaaaatacaaagaattttatcaaaaataacaaaatttatttgatttcttgatatgtgtaatttcatc 6129192  T
Q  121 aaaatggacatgtattttgaaacggagggagta 153  Q
    |||   || | ||||| ||||||||||||||||    
T  6129193 aaaggcgataagtattatgaaacggagggagta 6129225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 16 - 153
Target Start/End: Complemental strand, 19692860 - 19692723
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 115  Q
    |||| ||||||||||||||||| ||||| |||||||||||| ||||| | | |||||| |||||| |||| ||||||||| |||||||||  ||  ||||    
T  19692860 aatagaatgaaataataaatgagtaaggatattatagaaaaaacacaaagaatttcataaaaaatgacaacatttatttgatttcttggtatgtataatt 19692761  T
Q  116 tctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||| ||||||||| |  |||| |||||| |||| ||||    
T  19692760 tcttcaaaatggagaattattgtgaaacagaggaagta 19692723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 16 - 153
Target Start/End: Complemental strand, 19703445 - 19703308
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 115  Q
    |||| ||||||||||||||||| ||||| |||||||||||| ||||| | | |||||| |||||| |||| ||||||||| |||||||||  ||  ||||    
T  19703445 aatagaatgaaataataaatgagtaaggatattatagaaaaaacacaaagaatttcataaaaaatgacaacatttatttgatttcttggtatgtataatt 19703346  T
Q  116 tctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||| ||||||||| |  |||| |||||| |||| ||||    
T  19703345 tcttcaaaatggagaattattgtgaaacagaggaagta 19703308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 472 - 532
Target Start/End: Complemental strand, 6503226 - 6503166
Alignment:
Q  472 tcatattatcaaagaattatacgaattcaagatggtgtcttcaagaactggagaaaataac 532  Q
    ||||||| |||||||||||||| || ||||||||||||||||||||| |||||||||||||    
T  6503226 tcatattttcaaagaattatactaaatcaagatggtgtcttcaagaattggagaaaataac 6503166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 291 - 430
Target Start/End: Complemental strand, 6524137 - 6523998
Alignment:
Q  291 tacaatgtgtacttgggtttctgtgatgaagatgcgggttcttttgctttggaactctatacagctcttagttcagaagctggaatcatagttttctggg 390  Q
    ||||||||||||||| |||| ||  |  |||| ||||||||||||||| || ||||||| || |||||||||||||| ||| || |    ||||||||||    
T  6524137 tacaatgtgtacttgagtttttgcaacaaagacgcgggttcttttgctctgcaactctacacggctcttagttcagaggctagagtttctgttttctggg 6524038  T
Q  391 acaatgagaggattggaagtggagatcaagaaataccaac 430  Q
    ||||||  ||| ||||||||||||||| | ||||| ||||    
T  6524037 acaatgcaaggcttggaagtggagatcgacaaatatcaac 6523998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 34284171 - 34284234
Alignment:
Q  30 ataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatt 93  Q
    |||||| |||||||||||||||||||| | ||| ||| ||||||||||| ||||||||||||||    
T  34284171 ataaataattaagggtattatagaaaaaatacaaatagtttcatcaaaagtaacaaaatttatt 34284234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 475 - 532
Target Start/End: Complemental strand, 6506730 - 6506673
Alignment:
Q  475 tattatcaaagaattatacgaattcaagatggtgtcttcaagaactggagaaaataac 532  Q
    |||| ||||||||||||   |||||||||||||||||||||||| |||||||||||||    
T  6506730 tattttcaaagaattattttaattcaagatggtgtcttcaagaattggagaaaataac 6506673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 48652356 - 48652268
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 105  Q
    |||| ||||||||||||||||| |||  || ||| |||||| | ||| | | |||||||||||||||||||||||||||| |||||||||    
T  48652356 aatataatgaaataataaatgagtaaatgtgttaaagaaaa-atacaaagaatttcatcaaaaataacaaaatttatttgatttcttggt 48652268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 125 - 160
Target Start/End: Complemental strand, 19433386 - 19433351
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaatattta 160  Q
    ||||||||||||||||||||||||||||||||||||    
T  19433386 tggacatgtattttgaaacggagggagtaatattta 19433351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 435 - 545
Target Start/End: Complemental strand, 6594125 - 6594015
Alignment:
Q  435 gtgctgaatgtcattgaacattgcaaacttggtgtagtcatattatcaaagaattatacgaattcaagatggtgtcttcaagaactggagaaaataactg 534  Q
    ||||||||||| ||| || | |||||| | | ||||||| | || ||||| |||||||| |||||||| | |||| | |||||| ||||||||||||||     
T  6594125 gtgctgaatgtaattcaagactgcaaagtcgctgtagtcttgttttcaaaaaattatactaattcaagttcgtgtatacaagaattggagaaaataactc 6594026  T
Q  535 agtgttaccga 545  Q
    |||||| ||||    
T  6594025 agtgttgccga 6594015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 138
Target Start/End: Complemental strand, 19361700 - 19361662
Alignment:
Q  100 cttggttagtgcaatttctccaaaatggacatgtatttt 138  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  19361700 cttggttactgcaatttctccaaaatggacatgtatttt 19361662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 18507404 - 18507472
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaa 85  Q
    |||| |||||||||||||||  | |||| |||||||||||| ||||||| | ||||||||||||||||||    
T  18507404 aatataatgaaataataaattgtcaagg-tattatagaaaaaacacacaaaatttcatcaaaaataacaa 18507472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 21064899 - 21064834
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaata 81  Q
    |||||| |||||||||||||||  ||||| |||||||  |||| ||||||||| ||||||||||||||    
T  21064899 aaaatagaatgaaataataaatagttaagagtattat--aaaaaacacacataatttcatcaaaaata 21064834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 125 - 157
Target Start/End: Original strand, 55209808 - 55209840
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaatat 157  Q
    |||||||||||||||||||||||||||||||||    
T  55209808 tggacatgtattttgaaacggagggagtaatat 55209840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 156
Target Start/End: Original strand, 2760961 - 2760992
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaata 156  Q
    ||||||||||||||||||||||||||||||||    
T  2760961 tggacatgtattttgaaacggagggagtaata 2760992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 381 - 540
Target Start/End: Original strand, 6646090 - 6646249
Alignment:
Q  381 gttttctgggacaatgagaggattggaagtggagatcaagaaataccaacatccgtgctgaatgtcattgaacattgcaaacttggtgtagtcatattat 480  Q
    |||||||||||  |||||| | ||||||| || |||| || ||||||||| ||  |  ||||||| || ||| |||||||| ||| |||| |  |||| |    
T  6646090 gttttctgggatgatgagaagcttggaagcggtgatcgaggaataccaacctcaattttgaatgttatagaagattgcaaagttgctgtaatagtatttt 6646189  T
Q  481 caaagaattatacgaattcaagatggtgtcttcaagaactggagaaaataactgagtgtt 540  Q
    |||  ||||||   |||||||||| ||||||||||||| | ||||| ||||| |||||||    
T  6646190 caagaaattatgttaattcaagatcgtgtcttcaagaatttgagaagataaccgagtgtt 6646249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 480 - 539
Target Start/End: Original strand, 6747960 - 6748019
Alignment:
Q  480 tcaaagaattatacgaattcaagatggtgtcttcaagaactggagaaaataactgagtgt 539  Q
    |||||||| |||||  | ||||| ||||||||||| ||| ||||||||||||||||||||    
T  6747960 tcaaagaaatatactgaatcaagctggtgtcttcaggaattggagaaaataactgagtgt 6748019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 155
Target Start/End: Complemental strand, 2760758 - 2760728
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaat 155  Q
    |||||||||||||||||||||||||||||||    
T  2760758 tggacatgtattttgaaacggagggagtaat 2760728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 146
Target Start/End: Original strand, 19362189 - 19362223
Alignment:
Q  112 aatttctccaaaatggacatgtattttgaaacgga 146  Q
    |||||||| ||||||||||||||||||||||||||    
T  19362189 aatttctctaaaatggacatgtattttgaaacgga 19362223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 115 - 161
Target Start/End: Complemental strand, 20249052 - 20249006
Alignment:
Q  115 ttctccaaaatggacatgtattttgaaacggagggagtaatatttat 161  Q
    |||||||||||||||| ||||| |||||||||| ||||| |||||||    
T  20249052 ttctccaaaatggacaagtattatgaaacggagtgagtattatttat 20249006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 155
Target Start/End: Complemental strand, 55209602 - 55209572
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaat 155  Q
    |||||||||||||||||||||||||||||||    
T  55209602 tggacatgtattttgaaacggagggagtaat 55209572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 4467548 - 4467520
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  4467548 tggacatgtattttgaaacggagggagta 4467520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 634 - 670
Target Start/End: Complemental strand, 6593935 - 6593899
Alignment:
Q  634 cttttcatgattttctggatagaatctcaatgaagga 670  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  6593935 cttttcatgattttctggatagaatatcaatggagga 6593899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 12071799 - 12071839
Alignment:
Q  115 ttctccaaaatggacatgtattttgaaacggagggagtaat 155  Q
    ||||| |||||||||| ||||| ||||||||||||||||||    
T  12071799 ttctctaaaatggacaagtattatgaaacggagggagtaat 12071839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 26170014 - 26169986
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  26170014 tggacatgtattttgaaacggagggagta 26169986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 26170221 - 26170249
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  26170221 tggacatgtattttgaaacggagggagta 26170249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 29830371 - 29830343
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  29830371 tggacatgtattttgaaacggagggagta 29830343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 35381128 - 35381156
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  35381128 tggacatgtattttgaaacggagggagta 35381156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 38416678 - 38416650
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  38416678 tggacatgtattttgaaacggagggagta 38416650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 38416884 - 38416912
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  38416884 tggacatgtattttgaaacggagggagta 38416912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 44232105 - 44232077
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  44232105 tggacatgtattttgaaacggagggagta 44232077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 45292066 - 45292094
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  45292066 tggacatgtattttgaaacggagggagta 45292094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 47386520 - 47386548
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  47386520 tggacatgtattttgaaacggagggagta 47386548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 51777755 - 51777715
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaa 56  Q
    ||||| ||||||||||||||| ||||| |||||||||||||    
T  51777755 aataacatgaaataataaatggttaagagtattatagaaaa 51777715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 145; Significance: 6e-76; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 23045411 - 23045559
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23045411 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 23045510  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaata 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23045511 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaata 23045559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 284468 - 284330
Alignment:
Q  18 taaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  284468 taaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttc 284369  T
Q  118 tccaaaatggacatgtattttgaaacggagggagtaata 156  Q
    |||||||||||||||||||||||||||||||||||||||    
T  284368 tccaaaatggacatgtattttgaaacggagggagtaata 284330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 40783789 - 40783934
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  40783789 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggtta 40783888  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  40783889 gtgcaatttctccaaaatgaacatgtattttgaaacggagggagta 40783934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 321765 - 321625
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  321765 aaaataaaatgaaataataaatgattaaggatattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 321666  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagtaa 154  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  321665 tttctccaaaatgaacatgtattttgaaacggagggagtaa 321625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 8 - 161
Target Start/End: Original strand, 47037984 - 47038135
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||| ||||    
T  47037984 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacac--acatattttcatcaaaaataacaaaatttatttgatttcttagtta 47038081  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaatatttat 161  Q
    || |||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  47038082 gtacaatttctccaaaatggacatgtattttgaaacggatggagtagtatttat 47038135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 24772043 - 24772183
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||| ||| |||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24772043 aaaatagaataaaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 24772142  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagtaa 154  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  24772143 tttcttcaaaatggacatgtattttgaaacggagggagtaa 24772183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 14 - 152
Target Start/End: Original strand, 27211102 - 27211240
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||| ||| |||||||||||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||    
T  27211102 aaaatagaataaaataataaatggttaagggtattatagaaaacacacatataatttcctcaaaaataacaaaatttatttggtttcttggttattgcaa 27211201  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagt 152  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27211202 tttctccaaaatggacatgtattttgaaacggagggagt 27211240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 23526379 - 23526240
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||    
T  23526379 aaaatagaatgaaataataaatggttaagggtattatagaaaacacacacataatttcatcaaaaataacaaaatttatttggtttcttgattactgcaa 23526280  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||| ||||||||||||||| ||| ||||||    
T  23526279 tttctccaaaatgaacatgtattttgaaatggaaggagta 23526240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 46771776 - 46771644
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||| ||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||| |||||    
T  46771776 aaaatagaatgaaaaaataaatggttaagggtattatagaaaacacacacataatttcatcaaaaataacaaaatttatttaatttcttggttactgcaa 46771677  T
Q  114 tttctccaaaatggacatgtattttgaaacgga 146  Q
    |||||||||||||||||||||||||||||||||    
T  46771676 tttctccaaaatggacatgtattttgaaacgga 46771644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 14 - 133
Target Start/End: Complemental strand, 33082884 - 33082765
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||| ||| |||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  33082884 aaaatagaataaaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttgatttcttggttagtgcaa 33082785  T
Q  114 tttctccaaaatggacatgt 133  Q
    |||||||||||| |||||||    
T  33082784 tttctccaaaatagacatgt 33082765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 52037260 - 52037382
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||| |||||||||||||||| ||||| |||||||||||||||||||  || ||| ||||||||||| |||||||||||||||| |||| || |||||    
T  52037260 aaaatagaatgaaataataaatggttaagagtattatagaaaacacaca--taattttatcaaaaataataaaatttatttggttttttggataatgcaa 52037357  T
Q  114 tttctccaaaatggacatgtatttt 138  Q
    |||||| ||||||||||||||||||    
T  52037358 tttctctaaaatggacatgtatttt 52037382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 1749446 - 1749305
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||| ||| |||||||||||| |||| | |||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||| ||| ||  |    
T  1749446 aaaatagaataaaataataaatggttaatgctattatagaaaacacacatataatttcatcaaaaataacaaaatttatttgatttcttgattactgtga 1749347  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagtaat 155  Q
    ||| |   ||||||| ||||||||| |||||||  |||||||    
T  1749346 ttttttttaaatggaaatgtattttaaaacggatcgagtaat 1749305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 16 - 157
Target Start/End: Original strand, 51064893 - 51065037
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtatt---atagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgca 112  Q
    |||| |||||||||||||| || ||||||||||   |||||||| ||||| | | ||||||||||||| |||| ||||||||| || ||||||  ||| |    
T  51064893 aatataatgaaataataaacgagtaagggtattattatagaaaaaacacaaagaatttcatcaaaaatgacaacatttatttgattccttggtatgtgta 51064992  T
Q  113 atttctccaaaatggacatgtattttgaaacggagggagtaatat 157  Q
    ||||||  |||||||||| ||||| ||||||||||||||||||||    
T  51064993 atttctttaaaatggacaagtattgtgaaacggagggagtaatat 51065037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 100 - 155
Target Start/End: Complemental strand, 41959131 - 41959076
Alignment:
Q  100 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 155  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41959131 cttggttattgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 41959076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 100 - 153
Target Start/End: Complemental strand, 3943113 - 3943060
Alignment:
Q  100 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3943113 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 3943060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 100 - 153
Target Start/End: Complemental strand, 9588723 - 9588670
Alignment:
Q  100 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9588723 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 9588670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 1837978 - 1838053
Alignment:
Q  25 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 102  Q
    ||||||||||||  |||||||||||||||||| |||||  || |||||||||||||||||||||||||||| ||||||    
T  1837978 aaataataaatgggtaagggtattatagaaaaaacaca--taatttcatcaaaaataacaaaatttatttgatttctt 1838053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 7765154 - 7765072
Alignment:
Q  12 agaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 94  Q
    |||||| ||||| |||||||||||| ||| ||||||||  ||||||||||| ||| ||||| |||||||||||||||||||||    
T  7765154 agaaaaaaaaattaaataataaatggttatgggtattacggaaaacacacatataatttcaccaaaaataacaaaatttattt 7765072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 100 - 153
Target Start/End: Original strand, 13984991 - 13985044
Alignment:
Q  100 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  13984991 cttggttactgcaatttctccaaaatggacatgtattttgaaacggatggagta 13985044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 31003926 - 31004012
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 105  Q
    |||| ||| |||||||||||| ||||||||||||||||||| | ||||||| |||||| ||||||   |||||||||||| |||||||||    
T  31003926 aatagaattaaataataaatggttaagggtattatagaaaaaatacacatactttcattaaaaat---aaaatttatttgatttcttggt 31004012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 153
Target Start/End: Original strand, 40261419 - 40261549
Alignment:
Q  24 gaaataataaatgattaagggtattatagaaaaca-cacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtg-caatttctcca 121  Q
    ||||||||||||| |||| | |||||||||||| | |||||  | ||||||||||| |||||||||||||||| |||||||||  |||  ||||||| ||    
T  40261419 gaaataataaatggttaatgatattatagaaaaaaacacacgcaatttcatcaaaattaacaaaatttatttgatttcttggtatgtgtaaatttct-ca 40261517  T
Q  122 aaatggacatgtattttgaaacggagggagta 153  Q
    |||   ||||||||| ||||||||||||||||    
T  40261518 aaagcaacatgtattgtgaaacggagggagta 40261549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 3657199 - 3657125
Alignment:
Q  31 taaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 105  Q
    |||||| |||||| |||||||||||| ||| ||| | |||||| ||||||||||||||||||||| |||||||||    
T  3657199 taaatggttaaggttattatagaaaaaacatacaaaatttcattaaaaataacaaaatttatttgatttcttggt 3657125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 52478103 - 52478016
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 105  Q
    |||| |||||||| ||||||  |||||| |||||||||||| ||||| |   |||||||||||||||||||||||||||| |||||||||    
T  52478103 aatagaatgaaatgataaatttttaaggttattatagaaaaaacacaaaa--tttcatcaaaaataacaaaatttatttgatttcttggt 52478016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 153
Target Start/End: Complemental strand, 44227889 - 44227848
Alignment:
Q  112 aatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  44227889 aatttctccaaaatggacatgtattttgaaacggagggagta 44227848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 27143151 - 27143239
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaaca-cacacatattttcatcaaaaataacaaaatttatttggtttcttg 103  Q
    |||| ||||||||||||||||||||||  |||||||||||| | | |||  | |||| ||||||||||||||||||||||| |||||||    
T  27143151 aatagaatgaaataataaatgattaagaatattatagaaaaaaactcacggaatttcctcaaaaataacaaaatttatttgatttcttg 27143239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 18396832 - 18396754
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 94  Q
    |||| ||||||||||| |||| ||||   ||||||||||||  |||||||| |||||| ||||||||||||||||||||    
T  18396832 aatagaatgaaataatgaatggttaaatatattatagaaaaaccacacataatttcataaaaaataacaaaatttattt 18396754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 41959809 - 41959855
Alignment:
Q  112 aatttctccaaaatggacatgtattttgaaacggagggagtaatatt 158  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||    
T  41959809 aatttctctaaaatggacatgtattttgaaacggagggagtattatt 41959855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 112 - 153
Target Start/End: Original strand, 3943763 - 3943804
Alignment:
Q  112 aatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  3943763 aatttctctaaaatggacatgtattttgaaacggagggagta 3943804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 31061594 - 31061662
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaa 85  Q
    |||| |||||||||||||||| ||| ||||||||| ||||| ||||||||| |||||| |||||||||||    
T  31061594 aatataatgaaataataaatggtta-gggtattatggaaaaaacacacataatttcataaaaaataacaa 31061662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 40562733 - 40562797
Alignment:
Q  28 taataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatt 93  Q
    ||||||||| |||| |||||||||||||||||| | ||| ||| ||||||||||||||||||||||    
T  40562733 taataaatggttaatggtattatagaaaacacatatataattt-atcaaaaataacaaaatttatt 40562797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 100 - 153
Target Start/End: Original strand, 44228228 - 44228281
Alignment:
Q  100 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||  ||||||||||||||||||||||||||||||||| ||||| ||||    
T  44228228 cttggttacagcaatttctccaaaatggacatgtattttgaaatggaggtagta 44228281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 34458863 - 34459000
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 115  Q
    |||| ||||||||||||||| | ||||| |||||||||||  | ||||| | |||||| |||||||  |||||||||||| |||||||||  ||| ||||    
T  34458863 aatagaatgaaataataaattagtaaggttattatagaaa--aaacacagaatttcataaaaaatagaaaaatttatttgatttcttggtatgtgtaatt 34458960  T
Q  116 t-ctccaaaatggacatgtattttgaaacggagggagtaa 154  Q
    | ||  ||||  |||| ||||| ||||||||| |||||||    
T  34458961 tcctaaaaaaacgacaagtattgtgaaacggatggagtaa 34459000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 40564241 - 40564293
Alignment:
Q  87 atttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttg 139  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||| |||||||    
T  40564241 atttatttggtttcttggttactgcgatttttccaaaatggacatatattttg 40564293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 153
Target Start/End: Original strand, 9589631 - 9589672
Alignment:
Q  112 aatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||| ||||| |||||||||||||||||||||||||||    
T  9589631 aatttctctaaaatagacatgtattttgaaacggagggagta 9589672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 105
Target Start/End: Original strand, 14351954 - 14351989
Alignment:
Q  70 tcatcaaaaataacaaaatttatttggtttcttggt 105  Q
    |||||||||||||||||||||||||| |||||||||    
T  14351954 tcatcaaaaataacaaaatttatttgttttcttggt 14351989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 1168414 - 1168369
Alignment:
Q  100 cttggttagtgcaatttctccaaaatggacatgtattttgaaacgg 145  Q
    |||||||| |||||||||| |||||  |||||||||||||||||||    
T  1168414 cttggttactgcaatttcttcaaaaacgacatgtattttgaaacgg 1168369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 154
Target Start/End: Original strand, 16120674 - 16120703
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaa 154  Q
    ||||||||||||||||||||||||||||||    
T  16120674 tggacatgtattttgaaacggagggagtaa 16120703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 40772006 - 40772043
Alignment:
Q  125 tggacatgtattttgaaacggagggagta-atatttat 161  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  40772006 tggacatgtattttgaaacggagggagtatatatttat 40772043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 6402644 - 6402672
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  6402644 tggacatgtattttgaaacggagggagta 6402672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 121 - 153
Target Start/End: Complemental strand, 10845513 - 10845481
Alignment:
Q  121 aaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||||||||||| |||||    
T  10845513 aaaatggacatgtattttgaaacggagtgagta 10845481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 11641095 - 11641067
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  11641095 tggacatgtattttgaaacggagggagta 11641067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 13984468 - 13984436
Alignment:
Q  122 aaatggacatgtattttgaaacggagggagtaa 154  Q
    ||||||| |||||||||||||||||||||||||    
T  13984468 aaatggatatgtattttgaaacggagggagtaa 13984436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 30701746 - 30701718
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  30701746 tggacatgtattttgaaacggagggagta 30701718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 36399332 - 36399360
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  36399332 tggacatgtattttgaaacggagggagta 36399360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 36757514 - 36757486
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  36757514 tggacatgtattttgaaacggagggagta 36757486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 40771800 - 40771772
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  40771800 tggacatgtattttgaaacggagggagta 40771772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 52024260 - 52024288
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  52024260 tggacatgtattttgaaacggagggagta 52024288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 142; Significance: 4e-74; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 29260337 - 29260192
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29260337 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 29260238  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  29260237 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 29260192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 1605718 - 1605579
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1605718 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 1605619  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  1605618 tttctccaaaatggacatgtattttgaaacggagggagta 1605579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 8626627 - 8626481
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8626627 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 8626528  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 154  Q
     |||||||||| |||||||||||||||||||||||||||||||||||    
T  8626527 atgcaatttcttcaaaatggacatgtattttgaaacggagggagtaa 8626481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 30734615 - 30734753
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30734615 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 30734714  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacgga 146  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30734715 gtgcaatttctccaaaatggacatgtattttgaaacgga 30734753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 13757347 - 13757208
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  13757347 aaaataaaatgaaataataattgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgtaa 13757248  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  13757247 tttctccaaaatggacatgtattttgaaacggagagagta 13757208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 7761438 - 7761301
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7761438 aaaataaaatgaaataataaatgattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttatttagtttcttggttagtgcaa 7761341  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7761340 tttctccaaaatggacatgtattttgaaacggagggagta 7761301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 15064832 - 15064971
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||| ||| |||||||||||| ||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||    
T  15064832 aaaatataatcaaataataaatggttaagggtagtataaaaaacacacacataatttcatcaaaaataacaaaatttatttggtttcttggttgctgcaa 15064931  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  15064932 tttctctaaaatggacatgtattttgaaacggagggagta 15064971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 31559874 - 31559998
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||| |||||    
T  31559874 aaaaaaaaatgaaataataaatgattaagggtattacagaaaacatacacatattttcatcaaaaataacaaaatttatttgattttttggttaatgcaa 31559973  T
Q  114 tttctccaaaatggacatgtatttt 138  Q
    |||||||||||||||||||||||||    
T  31559974 tttctccaaaatggacatgtatttt 31559998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 8 - 155
Target Start/End: Complemental strand, 4129572 - 4129433
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||        |||||    
T  4129572 gagaaaaaaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttattt--------ggtta 4129481  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 155  Q
     ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  4129480 ctgcaatttctccaaagtggatatgtattttgaaacggagggagtaat 4129433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 17942590 - 17942443
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaat--aacaaaatttatttggtttcttggt 105  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||| ||||| |||||| |||||||||||||  || ||||  ||||||||||||||||    
T  17942590 gagaaaaaaataaaatgaaataataaatggttaagggtattatagagaacacgcacataatttcatcaaaaataaaaaaaaaaatatttggtttcttggt 17942491  T
Q  106 tagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    || ||||||||||| |||||||||||||||||||||||| ||||||||    
T  17942490 tactgcaatttctcaaaaatggacatgtattttgaaacgaagggagta 17942443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 8235763 - 8235624
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||| ||||||| |||||||||||| |||||    
T  8235763 aaaatagaatgaaataataaatgattaagggtattatagaaaacacacacataatatcataaaaaataacaaattttatttcgtttcttggttactgcaa 8235664  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||| ||||||| ||||||||||| |||  |||||||||    
T  8235663 tttcttcaaaatgtacatgtattttaaaatagagggagta 8235624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 38 - 147
Target Start/End: Original strand, 30734772 - 30734879
Alignment:
Q  38 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 137  Q
    |||||||||||||||||||||||||  || |||||||||||||||||||||||||||| ||| || |||| |||||||||| ||||||||||||||||||    
T  30734772 ttaagggtattatagaaaacacaca--taatttcatcaaaaataacaaaatttatttgatttttttgttactgcaatttcttcaaaatggacatgtattt 30734869  T
Q  138 tgaaacggag 147  Q
    ||||||||||    
T  30734870 tgaaacggag 30734879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 21277574 - 21277659
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 102  Q
    |||| |||||| || ||||| |||||||||||||||||||| ||||| | |||||||| ||||||||||||||||||||| ||||||    
T  21277574 aatagaatgaagtactaaataattaagggtattatagaaaa-acacataaattttcataaaaaataacaaaatttatttgatttctt 21277659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 100 - 153
Target Start/End: Original strand, 19996715 - 19996768
Alignment:
Q  100 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  19996715 cttggttactgcaatttctccaaaatagacatgtattttgaaacggagggagta 19996768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 3798233 - 3798151
Alignment:
Q  23 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 105  Q
    ||||||||||||||  ||||||| |||||||||| ||||| |||  ||||| ||||||||||||||||||||| ||| |||||    
T  3798233 tgaaataataaatgtgtaagggtgttatagaaaaaacacaaataacttcatgaaaaataacaaaatttatttgattttttggt 3798151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 153
Target Start/End: Complemental strand, 14287125 - 14286989
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 115  Q
    ||||||||||||||||||| |  |||||||||||||||||| |  |||| | |||||| ||||||||||||||||||||| ||| ||||   ||| ||||    
T  14287125 aataaaatgaaataataaaggggtaagggtattatagaaaa-aagcacagaatttcataaaaaataacaaaatttatttgatttattggcatgtgtaatt 14287027  T
Q  116 tctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |   |||||   ||| ||||| ||||||||||||||||    
T  14287026 ttctcaaaaactacaagtattgtgaaacggagggagta 14286989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 11370630 - 11370711
Alignment:
Q  21 aatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 102  Q
    |||| ||||||||||| ||||| |||||||| |||| |||||   | | |||||||||||||||||||||||||| ||||||    
T  11370630 aatggaataataaatggttaagagtattataaaaaaaacacaatgaatatcatcaaaaataacaaaatttatttgatttctt 11370711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 112 - 153
Target Start/End: Complemental strand, 19996363 - 19996322
Alignment:
Q  112 aatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  19996363 aatttctctaaaatggacatgtattttgaaacggagggagta 19996322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 4147959 - 4147923
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaatatttat 161  Q
    ||||||||||||||||||||||||||||| |||||||    
T  4147959 tggacatgtattttgaaacggagggagtattatttat 4147923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 156
Target Start/End: Original strand, 25476042 - 25476073
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaata 156  Q
    ||||||||||||||||||||||||||||||||    
T  25476042 tggacatgtattttgaaacggagggagtaata 25476073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 15064733 - 15064695
Alignment:
Q  115 ttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  15064733 ttctccaaaatggacaagtattatgaaacggagggagta 15064695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 17942682 - 17942720
Alignment:
Q  115 ttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  17942682 ttctccaaaatggacaagtattatgaaacggagggagta 17942720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 153
Target Start/End: Complemental strand, 1814680 - 1814595
Alignment:
Q  68 tttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||| |||||||| ||||||| |  ||| |||||   |||||  |||| ||||| ||||||||| ||||||    
T  1814680 tttcatcaaaaataacaaagtttatttgatttcttgatatgtgtaattttctcaaaagcgacaagtattgtgaaacggatggagta 1814595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 154
Target Start/End: Original strand, 22055006 - 22055035
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaa 154  Q
    ||||||||||||||||||||||||||||||    
T  22055006 tggacatgtattttgaaacggagggagtaa 22055035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 158
Target Start/End: Complemental strand, 32671844 - 32671811
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaatatt 158  Q
    ||||||||||||||||||||||||||||| ||||    
T  32671844 tggacatgtattttgaaacggagggagtattatt 32671811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 95
Target Start/End: Original strand, 33845469 - 33845502
Alignment:
Q  62 acatattttcatcaaaaataacaaaatttatttg 95  Q
    ||||| ||||||||||||||||||||||||||||    
T  33845469 acataatttcatcaaaaataacaaaatttatttg 33845502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 18668716 - 18668688
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  18668716 tggacatgtattttgaaacggagggagta 18668688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 18668922 - 18668950
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  18668922 tggacatgtattttgaaacggagggagta 18668950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 19087986 - 19087958
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  19087986 tggacatgtattttgaaacggagggagta 19087958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 19088192 - 19088220
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  19088192 tggacatgtattttgaaacggagggagta 19088220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 20437045 - 20437017
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  20437045 tggacatgtattttgaaacggagggagta 20437017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 24623969 - 24623941
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  24623969 tggacatgtattttgaaacggagggagta 24623941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 30235447 - 30235487
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaa 56  Q
    |||| |||||||||||||||||||||| ||| |||||||||    
T  30235447 aatagaatgaaataataaatgattaagagtaatatagaaaa 30235487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 32414913 - 32414941
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  32414913 tggacatgtattttgaaacggagggagta 32414941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 32420754 - 32420782
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  32420754 tggacatgtattttgaaacggagggagta 32420782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 140; Significance: 6e-73; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 10981647 - 10981508
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10981647 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 10981548  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10981547 tttctccaaaatggacatgtattttgaaacggagggagta 10981508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 27813956 - 27813811
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27813956 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacatacatattttcatcaaaaataacaaaatttatttggtttcttggtta 27813857  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  27813856 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 27813811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 36453256 - 36453399
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36453256 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaaaacacacatattttcatcaaaaataataaaatttatttggtttcttggtta 36453355  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggag 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  36453356 gtgcaatttctccaaaatggacatgtattttgaaacggagggag 36453399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 40349099 - 40348960
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  40349099 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaa 40349000  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  40348999 tttctccaaaatggacatgtattttgaaacggaaggagta 40348960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 47110588 - 47110449
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  47110588 aaaataaaataaaataataaatgattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttattttgtttcttggttagtgcaa 47110491  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagtaat 155  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  47110490 tttctccaaaatggacatgtattttgaaatggagggagtaat 47110449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 8 - 155
Target Start/End: Original strand, 25614485 - 25614630
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| |||||||||||||||||||||||||||||||||||  |||||||||  |||||||||||||||||||||||||||||||||||||| |||||||    
T  25614485 gagaaaaaaataaaatgaaataataaatgattaagggtatttcagaaaacac--acatattttcatcaaaaataacaaaatttatttggttttttggtta 25614582  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 155  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25614583 gtgcaatttctccaaaatggacatgtattttgaaacggaaggagtaat 25614630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 3091649 - 3091565
Alignment:
Q  21 aatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 105  Q
    |||||||||||||||| ||||||||||||||||||| ||||| | | |||||||||||||||||||||||||||| ||| |||||    
T  3091649 aatgaaataataaatggttaagggtattatagaaaaaacacaaagaatttcatcaaaaataacaaaatttatttgattttttggt 3091565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 100 - 153
Target Start/End: Original strand, 25060133 - 25060186
Alignment:
Q  100 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25060133 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 25060186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 7743542 - 7743625
Alignment:
Q  21 aatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 105  Q
    ||||||||||||||| ||||| |||||||||||||  | ||||||| |||||||||||||||||||||||||||| | |||||||    
T  7743542 aatgaaataataaataattaacggtattatagaaagaa-acacataatttcatcaaaaataacaaaatttatttgatatcttggt 7743625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 27942177 - 27942256
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatt 93  Q
    |||||| |||||||||||||||| |||| |||||||||||||| ||||||||| | |||| |||||||| ||||||||||    
T  27942177 aaaatagaatgaaataataaatggttaaaggtattatagaaaaaacacacataatctcattaaaaataaaaaaatttatt 27942256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 100 - 153
Target Start/End: Original strand, 2911548 - 2911601
Alignment:
Q  100 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  2911548 cttggttactgcaatttctccaaaatggacatgtattttgaaatggagggagta 2911601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 16360511 - 16360442
Alignment:
Q  24 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttg 95  Q
    ||||||||||||| ||||||||||||||||||  | ||||| | ||||||||||||||||||||||||||||    
T  16360511 gaaataataaatggttaagggtattatagaaa--aaacacagaatttcatcaaaaataacaaaatttatttg 16360442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 16662231 - 16662146
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 103  Q
    |||| ||| |||||||||||| |||||||||||||| |||| ||||| ||  |||||||||||||||||||||||||||  |||||||    
T  16662231 aatataataaaataataaatggttaagggtattataaaaaaaacacaaat--tttcatcaaaaataacaaaatttattttatttcttg 16662146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 17636591 - 17636506
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 103  Q
    |||| ||| |||||||||||| |||||||||||||| |||| ||||| ||  |||||||||||||||||||||||||||  |||||||    
T  17636591 aatataataaaataataaatggttaagggtattataaaaaaaacacaaat--tttcatcaaaaataacaaaatttattttatttcttg 17636506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 3498892 - 3498973
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttg 95  Q
    ||||||||||||||||||||||| ||||  ||||||||||||| | ||| | | |||||| ||||||||||||||| |||||    
T  3498892 aaaataaaatgaaataataaatggttaaaagtattatagaaaagatacaaaaaatttcataaaaaataacaaaattaatttg 3498973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 37983289 - 37983179
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 115  Q
    |||| |||||||||||||||| |||| ||||||||| |||||| | |     |||||||||||||||||||||||||||| ||||||| |  ||| ||||    
T  37983289 aatataatgaaataataaatggttaaaggtattataaaaaacataaaa----tttcatcaaaaataacaaaatttatttgatttcttgatatgtgtaatt 37983194  T
Q  116 tctccaaaatggaca 130  Q
    ||  |||||||||||    
T  37983193 tcctcaaaatggaca 37983179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 8380063 - 8379948
Alignment:
Q  33 aatgattaagggtattatagaaaaca-cacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacat 131  Q
    |||||||| ||||||||||||||| | |||| | |  ||||| || |||||||||||||||||| |||||| ||   || ||||||  |||||| ||||     
T  8380063 aatgattaggggtattatagaaaaaagcacaaaaaagttcattaacaataacaaaatttatttgatttcttagtatatgtaatttcctcaaaatcgacaa 8379964  T
Q  132 gtattttgaaacggag 147  Q
    ||||| ||||||||||    
T  8379963 gtattgtgaaacggag 8379948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 25059491 - 25059456
Alignment:
Q  112 aatttctccaaaatggacatgtattttgaaacggag 147  Q
    |||||||| |||||||||||||||||||||||||||    
T  25059491 aatttctctaaaatggacatgtattttgaaacggag 25059456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 160
Target Start/End: Original strand, 41898222 - 41898257
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaatattta 160  Q
    ||||||||||||||||||||||||||||| ||||||    
T  41898222 tggacatgtattttgaaacggagggagtattattta 41898257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 156
Target Start/End: Complemental strand, 47156055 - 47156024
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaata 156  Q
    ||||||||||||||||||||||||||||||||    
T  47156055 tggacatgtattttgaaacggagggagtaata 47156024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 159
Target Start/End: Complemental strand, 28061543 - 28061509
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaatattt 159  Q
    ||||||||||||||||||||||||||||| |||||    
T  28061543 tggacatgtattttgaaacggagggagtattattt 28061509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 159
Target Start/End: Complemental strand, 46103398 - 46103364
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaatattt 159  Q
    ||||||||||||||||||||||||||||| |||||    
T  46103398 tggacatgtattttgaaacggagggagtactattt 46103364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 153
Target Start/End: Complemental strand, 2910900 - 2910859
Alignment:
Q  112 aatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||  ||||| |||||||||||||||||||||||||||    
T  2910900 aatttctttaaaatagacatgtattttgaaacggagggagta 2910859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 28200335 - 28200298
Alignment:
Q  25 aaataataaatgattaagggtattatagaaaacacaca 62  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  28200335 aaataataaatgattaaggatattatagaaaaaacaca 28200298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 154
Target Start/End: Complemental strand, 36623336 - 36623307
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaa 154  Q
    ||||||||||||||||||||||||||||||    
T  36623336 tggacatgtattttgaaacggagggagtaa 36623307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 48602460 - 48602427
Alignment:
Q  129 catgtattttgaaacggagggagtaatatttata 162  Q
    ||||||||||||||||||||||||| ||||||||    
T  48602460 catgtattttgaaacggagggagtagtatttata 48602427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 16778533 - 16778505
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  16778533 tggacatgtattttgaaacggagggagta 16778505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 20885131 - 20885103
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  20885131 tggacatgtattttgaaacggagggagta 20885103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 25566576 - 25566548
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  25566576 tggacatgtattttgaaacggagggagta 25566548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 28061749 - 28061777
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  28061749 tggacatgtattttgaaacggagggagta 28061777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 36623542 - 36623570
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  36623542 tggacatgtattttgaaacggagggagta 36623570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 38852081 - 38852109
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  38852081 tggacatgtattttgaaacggagggagta 38852109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 41898016 - 41897988
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  41898016 tggacatgtattttgaaacggagggagta 41897988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 42877414 - 42877386
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  42877414 tggacatgtattttgaaacggagggagta 42877386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 46103597 - 46103625
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  46103597 tggacatgtattttgaaacggagggagta 46103625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 47156261 - 47156289
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  47156261 tggacatgtattttgaaacggagggagta 47156289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1431 (Bit Score: 138; Significance: 9e-72; HSPs: 1)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 31 - 176
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 130  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  131 gtgcaatttctccaaaatggacatgtattttgaaacggagagagta 176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 9e-72; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 11174355 - 11174500
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11174355 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 11174454  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  11174455 gtgcaatttctccaaaatgaacatgtattttgaaacggagggagta 11174500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 40058435 - 40058580
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40058435 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 40058534  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  40058535 gtgcaatttctccgaaatggacatgtattttgaaacggagggagta 40058580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 2540069 - 2540208
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2540069 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 2540168  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  2540169 tttctccaaaatggacatgtattttgaaacggaggaagta 2540208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 3585586 - 3585451
Alignment:
Q  18 taaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3585586 taaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttc 3585487  T
Q  118 tccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||||||||||||||||||||    
T  3585486 tccaaaatggacatgtattttgaaacggagggagta 3585451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 8 - 154
Target Start/End: Original strand, 43275531 - 43275675
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  43275531 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacac--acatattttcatcaaaaataacaaaatttatttggtttcttggtta 43275628  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  43275629 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 43275675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 37345716 - 37345570
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  37345716 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcattaaaaataacaaaatttatttggtttcttggttg 37345617  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 154  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  37345616 gtgcaatttcttcaaaatggacatgtattttgaaacggagggagtaa 37345570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 11646457 - 11646602
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11646457 gagaaaaaagtaaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggtta 11646556  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  11646557 gtgcaatttctccaaaatggacatgtattttgaaacgaagggagta 11646602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 7147058 - 7146913
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7147058 gagaaaaaaataaaatgaaataataaatgattaagggtattataaaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 7146959  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
     |||||||||| ||||||||||||||||||||||||||| ||||||    
T  7146958 ctgcaatttcttcaaaatggacatgtattttgaaacggaaggagta 7146913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 40918863 - 40919006
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| |||||||||||||||||||||||||||||||||    
T  40918863 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacaca--tgttttcataaaaaataacaaaatttatttggtttcttggtta 40918960  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  40918961 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 40919006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 30999661 - 30999791
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30999661 aaaataaaatgaaataataaatgattaagggtattatagaaaacac--acatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 30999758  T
Q  114 tttctccaaaatggacatgtattttgaaacgga 146  Q
    |||||||||||| ||||||||||||||||||||    
T  30999759 tttctccaaaattgacatgtattttgaaacgga 30999791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 8 - 161
Target Start/End: Complemental strand, 36068225 - 36068072
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||    
T  36068225 gagaaaaaagtaaaatgaaataattaatgattaagggtattatagaaaacacacatatattttcattaaaaataacaaaatttatttggttttttggtta 36068126  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaatatttat 161  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  36068125 gtacaattcctccaaaatggacatgtattttgaaacggagggagtaatttttat 36068072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 27035135 - 27034995
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||| |||||||||||||||| |||||||||||||||||| |||| ||||| ||||||||||||||| |||| ||||||||||||||||||| |||||    
T  27035135 aaaatagaatgaaataataaatggttaagggtattatagaaa-cacagacataatttcatcaaaaataaaaaaaattatttggtttcttggttactgcaa 27035037  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagtaat 155  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  27035036 tttctccaaaatggacatgtattttgaaacggagggagtaat 27034995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 8 - 155
Target Start/End: Original strand, 20546421 - 20546566
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| |||||| |||||||||||||||  |||||||||| ||| ||||||||||  || |||||||||||||||||||||||||||  ||||||| ||     
T  20546421 gagaaaaaaatataatgaaataataaattgttaagggtatcatataaaacacaca--taatttcatcaaaaataacaaaatttatttaatttcttgattg 20546518  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 155  Q
     |||||||||| |||||||||||| |||||||||| ||||||||||||    
T  20546519 ttgcaatttcttcaaaatggacatatattttgaaatggagggagtaat 20546566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 21 - 153
Target Start/End: Complemental strand, 28562554 - 28562421
Alignment:
Q  21 aatgaaataataaatgattaagggtattatagaaaaca-cacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctc 119  Q
    |||||||| |||||||| |||||||||||||||||| | |||| | | ||||||||||||| |||| ||||||||| || ||||||  ||| |||||||     
T  28562554 aatgaaatcataaatgagtaagggtattatagaaaaaaacacaaagaatttcatcaaaaatgacaacatttatttgattccttggtatgtgtaatttctt 28562455  T
Q  120 caaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||| ||||||||||||||||| ||||    
T  28562454 caaaatggacaagtattttgaaacggaggaagta 28562421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 45278701 - 45278761
Alignment:
Q  100 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaatattta 160  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45278701 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaatattta 45278761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 13881094 - 13881174
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatag-aaaacacacacatattttcatcaaaaataacaaaatttatttg 95  Q
    |||| |||||||||||||||||||||||||||||||| |||| || |||| | ||||||||||||||||||||||||||||    
T  13881094 aatataatgaaataataaatgattaagggtattatagaaaaaaacgcacacaatttcatcaaaaataacaaaatttatttg 13881174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 100 - 153
Target Start/End: Original strand, 8697898 - 8697951
Alignment:
Q  100 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8697898 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 8697951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 100 - 153
Target Start/End: Original strand, 41307961 - 41308014
Alignment:
Q  100 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  41307961 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 41308014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 28326797 - 28326883
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 105  Q
    |||| |||||||||||||||  ||||| ||||||| |||||   ||||||| |||||||||||||||||||||||||||| |||||||||    
T  28326797 aatagaatgaaataataaatagttaagagtattattgaaaa---acacataatttcatcaaaaataacaaaatttatttgatttcttggt 28326883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 16 - 151
Target Start/End: Complemental strand, 35866751 - 35866616
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 115  Q
    |||| ||| |||||||||||| ||||||||||||||||||| ||||| | | |||||| ||||||||||| |||||| |  |||||||||   |  ||||    
T  35866751 aatagaataaaataataaatgtttaagggtattatagaaaaaacacaaagaatttcatgaaaaataacaacatttatctaatttcttggtatatataatt 35866652  T
Q  116 tctccaaaatggacatgtattttgaaacggagggag 151  Q
    |||  |||||||||| ||||| ||||||||| ||||    
T  35866651 tctttaaaatggacaagtattgtgaaacggaaggag 35866616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 37510405 - 37510314
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 105  Q
    |||||||||||||||| |||||||||||||||||||| ||||| | | | | | ||| || |||||||||||||||||||| ||||||||||    
T  37510405 aaaataaaatgaaatattaaatgattaagggtattattgaaaaaatagaaagaattttattaaaaataacaaaatttatttagtttcttggt 37510314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 100 - 154
Target Start/End: Original strand, 40486453 - 40486507
Alignment:
Q  100 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 154  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  40486453 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtaa 40486507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 100 - 153
Target Start/End: Complemental strand, 10646645 - 10646592
Alignment:
Q  100 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  10646645 cttggttactgcaatttctccaaaatggacatgtattttgaaacggaggaagta 10646592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 21 - 153
Target Start/End: Complemental strand, 28568051 - 28567919
Alignment:
Q  21 aatgaaataataaatgattaagggtattatagaaaac-acacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctc 119  Q
    |||||||||||||||||  | |||||||||||||||  ||||| | | |||||| |||||| |||| ||||||||| ||  |||||  ||| |||||||     
T  28568051 aatgaaataataaatgagca-gggtattatagaaaaagacacaaagaatttcataaaaaatgacaacatttatttgattcattggtatgtgtaatttctt 28567953  T
Q  120 caaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||| ||||||||||||||||| ||||    
T  28567952 caaaatggacaagtattttgaaacggaggaagta 28567919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 21 - 153
Target Start/End: Complemental strand, 28575644 - 28575512
Alignment:
Q  21 aatgaaataataaatgattaagggtattatagaaaac-acacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctc 119  Q
    |||||||||||||||||  | |||||||||||||||  ||||| | | |||||| |||||| |||| ||||||||| ||  |||||  ||| |||||||     
T  28575644 aatgaaataataaatgagca-gggtattatagaaaaagacacaaagaatttcataaaaaatgacaacatttatttgattcattggtatgtgtaatttctt 28575546  T
Q  120 caaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||| ||||||||||||||||| ||||    
T  28575545 caaaatggacaagtattttgaaacggaggaagta 28575512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 10181002 - 10181074
Alignment:
Q  21 aatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 94  Q
    |||||||||||||||| |||| ||||||||| |||| ||| || || ||| || ||||||||||||||||||||    
T  10181002 aatgaaataataaatggttaacggtattata-aaaaaacaaacgtaattttataaaaaataacaaaatttattt 10181074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 153
Target Start/End: Complemental strand, 41305803 - 41305762
Alignment:
Q  112 aatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||| ||||||||||||||||||||||||||| |||||    
T  41305803 aatttctctaaaatggacatgtattttgaaacggagagagta 41305762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 40918769 - 40918725
Alignment:
Q  115 ttctccaaaatggacatgtattttgaaacggagggagtaatattt 159  Q
    ||||| |||||||||| ||||| ||||||||||||||||||||||    
T  40918769 ttctctaaaatggacaagtattatgaaacggagggagtaatattt 40918725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 39151542 - 39151464
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttg 95  Q
    |||| ||| |||||||||||||| ||   |||||||||||| | | ||||| ||||||||||||||||||| ||||||||    
T  39151542 aatagaataaaataataaatgataaattatattatagaaaaaa-atacataatttcatcaaaaataacaaagtttatttg 39151464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 115 - 161
Target Start/End: Original strand, 7147152 - 7147198
Alignment:
Q  115 ttctccaaaatggacatgtattttgaaacggagggagtaatatttat 161  Q
    ||||| |||||||||| ||||| |||||||||||||||| |||||||    
T  7147152 ttctctaaaatggacaagtattatgaaacggagggagtagtatttat 7147198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 30906828 - 30906917
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacac--acatattttcatcaaaaataacaaaatttatttggtttcttg 103  Q
    |||| ||| |||||||||||| |||||| | | |||||||| | ||  ||| | |||||| ||||||||||||||||||||| |||||||    
T  30906828 aatagaattaaataataaatggttaaggttttcatagaaaaaaaactcacaaaatttcataaaaaataacaaaatttatttgatttcttg 30906917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 159
Target Start/End: Original strand, 32998674 - 32998708
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaatattt 159  Q
    |||||||||||||||||||| ||||||||||||||    
T  32998674 tggacatgtattttgaaacgaagggagtaatattt 32998708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 154
Target Start/End: Complemental strand, 132045 - 132016
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaa 154  Q
    ||||||||||||||||||||||||||||||    
T  132045 tggacatgtattttgaaacggagggagtaa 132016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 160
Target Start/End: Complemental strand, 43275437 - 43275392
Alignment:
Q  115 ttctccaaaatggacatgtattttgaaacggagggagtaatattta 160  Q
    ||||| |||||||||| ||||| |||||||||||||||| ||||||    
T  43275437 ttctctaaaatggacaagtattatgaaacggagggagtattattta 43275392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 153
Target Start/End: Complemental strand, 45278053 - 45278013
Alignment:
Q  112 aatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||| ||||||||||||||||||||||| |||||||||    
T  45278053 aatttctctaaaatggacatgtattttgaaac-gagggagta 45278013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 616811 - 616783
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  616811 tggacatgtattttgaaacggagggagta 616783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 617017 - 617045
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  617017 tggacatgtattttgaaacggagggagta 617045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 623204 - 623176
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  623204 tggacatgtattttgaaacggagggagta 623176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 623410 - 623438
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  623410 tggacatgtattttgaaacggagggagta 623438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 121 - 153
Target Start/End: Complemental strand, 5878349 - 5878317
Alignment:
Q  121 aaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||| |||||||||||||||    
T  5878349 aaaatggacatgtatttggaaacggagggagta 5878317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 14237514 - 14237542
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  14237514 tggacatgtattttgaaacggagggagta 14237542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 40494618 - 40494646
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  40494618 tggacatgtattttgaaacggagggagta 40494646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 42587482 - 42587510
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  42587482 tggacatgtattttgaaacggagggagta 42587510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 138; Significance: 9e-72; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 13364988 - 13364843
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13364988 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 13364889  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  13364888 gtgcaatttctccaaaatgaacatgtattttgaaacggagggagta 13364843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 8 - 157
Target Start/End: Original strand, 46694242 - 46694391
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  46694242 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttgatta 46694341  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaatat 157  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46694342 gtgcaatttctccaaaaaggacatgtattttgaaacggagggagtaatat 46694391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 199000 - 198852
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |    
T  199000 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggtca 198901  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaata 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  198900 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaata 198852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 19241800 - 19241945
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19241800 gagaaaaaagtaaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggtta 19241899  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  19241900 gtgcaatttcaccaaaatggacatgtattttgaaacggagggagta 19241945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 36881425 - 36881281
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  36881425 gagaaaaaaataaaatgaaataataaataattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttatttggtttcttggtta 36881328  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  36881327 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 36881281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 8 - 154
Target Start/End: Original strand, 23088063 - 23088209
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23088063 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 23088162  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 154  Q
    ||||||||||| |||||| ||||| ||||||||||| ||||||||||    
T  23088163 gtgcaatttcttcaaaatagacatatattttgaaacagagggagtaa 23088209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 3383221 - 3383076
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3383221 gagaaaaaaataaaatgaaataataaatgtttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 3383122  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
     ||||||||||||||||||||||| |||||||||||||| ||||||    
T  3383121 ctgcaatttctccaaaatggacatatattttgaaacggaaggagta 3383076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 29375277 - 29375138
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  29375277 aaaaaaaaaagaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataagaaaatttatttggtttcttggttactgcaa 29375178  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  29375177 tttctccaaaatggacatgtattttgaaacggagggagta 29375138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 43750276 - 43750137
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||| |||||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| | |||    
T  43750276 aaaatagaatgaaataataaatggttaagtgtattatagaaaacacacatataatttcatcaaaaataacaaaatttatttggtttcttggttactccaa 43750177  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  43750176 tttctccaaaatggacatgtattttgaaacgaagggagta 43750137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 49 - 146
Target Start/End: Original strand, 32835129 - 32835226
Alignment:
Q  49 atagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacgga 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32835129 atagaaaacacacacataatttcatcaaaaataacaaaatttatttgttttcttggttattgcaatttctccaaaatggacatgtattttgaaacgga 32835226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 32 - 153
Target Start/End: Complemental strand, 13702890 - 13702769
Alignment:
Q  32 aaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacat 131  Q
    ||||| |||| |||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| | |||    
T  13702890 aaatggttaaaggtattatagaaaacaaacatataatttcatcaaaaatatcaaaatttatttggtttcttggttactgcaatttctccaaaataggcat 13702791  T
Q  132 gtattttgaaacggagggagta 153  Q
    ||||||| ||| ||| ||||||    
T  13702790 gtattttaaaatggatggagta 13702769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 27707363 - 27707441
Alignment:
Q  75 aaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  27707363 aaaaataacaaaatttatttggtttcttggttactgcaatttctccaaaatggacatgtatttcgaaacggagggagta 27707441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 100 - 153
Target Start/End: Complemental strand, 12094635 - 12094582
Alignment:
Q  100 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12094635 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 12094582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 19897067 - 19897152
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttct 101  Q
    |||| |||||||||||||| || |||||||||||||||||| ||||| | | |||||| ||||||||||||||||||||| |||||    
T  19897067 aatagaatgaaataataaaagagtaagggtattatagaaaaaacacaaagaatttcataaaaaataacaaaatttatttgatttct 19897152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 100 - 154
Target Start/End: Complemental strand, 19911562 - 19911508
Alignment:
Q  100 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 154  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  19911562 cttggttactgcaatttctccaaaatgaacatgtattttgaaacggagggagtaa 19911508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 68 - 153
Target Start/End: Complemental strand, 37293522 - 37293437
Alignment:
Q  68 tttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||| |||| ||||||||| || ||||||  ||| ||||||| ||||||||||| ||||| ||||||||||||||||    
T  37293522 tttcatcaaaaatgacaacatttatttgattccttggtatgtgtaatttcttcaaaatggacaagtattgtgaaacggagggagta 37293437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 37781069 - 37780996
Alignment:
Q  21 aatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 94  Q
    |||||||||||||||| ||||  ||||||||||||| ||||||| | ||||||||||||||| |||||||||||    
T  37781069 aatgaaataataaatggttaatagtattatagaaaaaacacacagaatttcatcaaaaataataaaatttattt 37780996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 100 - 153
Target Start/End: Original strand, 44277455 - 44277508
Alignment:
Q  100 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  44277455 cttggttactgcaatttctccaaaatagacatgtattttgaaacggagggagta 44277508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 153
Target Start/End: Complemental strand, 38805298 - 38805245
Alignment:
Q  100 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  38805298 cttggttactgcaatttctctaaaatggacatgtattttaaaacggagggagta 38805245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 48820444 - 48820512
Alignment:
Q  68 tttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtatt 136  Q
    |||||||||||||||||||||||||||||||| |||| ||  | ||||||||||||||  |||||||||    
T  48820444 tttcatcaaaaataacaaaatttatttggtttattggataccgtaatttctccaaaataaacatgtatt 48820512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 158
Target Start/End: Complemental strand, 44276816 - 44276770
Alignment:
Q  112 aatttctccaaaatggacatgtattttgaaacggagggagtaatatt 158  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||    
T  44276816 aatttctctaaaatggacatgtattttgaaacggagagagtaatatt 44276770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 48963223 - 48963156
Alignment:
Q  84 aaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||| ||||||| ||| ||||||||  ||||||||||||||| || ||||||||||||||||||||||||    
T  48963223 aaaaattatttgatttattggttag--caatttctccaaaatagatatgtattttgaaacggagggagta 48963156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 54086690 - 54086577
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 115  Q
    |||| ||||||||||||| ||| |||||||||||||||||| | ||| | | ||||||||| ||| |||| ||||||||| || |||||   ||| ||||    
T  54086690 aatagaatgaaataataa-tgagtaagggtattatagaaaaaatacaaagaatttcatcaataatgacaacatttatttgattccttggcatgtgtaatt 54086592  T
Q  116 tctccaaaatggaca 130  Q
    ||| |||||||||||    
T  54086591 tcttcaaaatggaca 54086577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 1455297 - 1455374
Alignment:
Q  25 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 102  Q
    |||||||||||| | ||| | ||||||||| | ||||| ||| ||| |||||||||||||||||||||||| ||||||    
T  1455297 aaataataaatggtgaagagaattatagaagaaacacaaataattttatcaaaaataacaaaatttatttgatttctt 1455374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 112 - 153
Target Start/End: Original strand, 19912174 - 19912215
Alignment:
Q  112 aatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  19912174 aatttctctaaaatggacatgtattttgaaacggagggagta 19912215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 27707120 - 27707177
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacat 65  Q
    ||||| ||||||||| ||||||||||||| |||||| |||||||||||||||| ||||    
T  27707120 gagaaaaaaataaaaagaaataataaatggttaaggatattatagaaaacacatacat 27707177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 112 - 153
Target Start/End: Original strand, 38806341 - 38806382
Alignment:
Q  112 aatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  38806341 aatttctctaaaatggacatgtattttgaaacggagggagta 38806382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 18356007 - 18356134
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 115  Q
    |||| |||||||| |||||||| |||||||||||||||||| ||||| | | ||||| ||||| | |||| || |||||  || |||||   ||| ||||    
T  18356007 aatagaatgaaatgataaatgagtaagggtattatagaaaaaacacaaagaatttcaccaaaactgacaacatgtatttaattccttggcatgtgtaatt 18356106  T
Q  116 tctccaaaatggacatgtattttgaaac 143  Q
    | | ||||||||| ||||||| ||||||    
T  18356107 ttttcaaaatggatatgtattgtgaaac 18356134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 159
Target Start/End: Complemental strand, 19823928 - 19823894
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaatattt 159  Q
    |||||||||||||||||||||||||||||||||||    
T  19823928 tggacatgtattttgaaacggagggagtaatattt 19823894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 146
Target Start/End: Original strand, 53559750 - 53559880
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 115  Q
    ||||||||||||||||||| |  ||||| |||  || | || ||||| | | |||||||||||||||||| ||||||||| ||||||| |  ||| ||||    
T  53559750 aataaaatgaaataataaacgggtaaggatatcgtaaataaaacacagagaatttcatcaaaaataacaacatttatttgttttcttgatatgtgtaatt 53559849  T
Q  116 tctccaaaatggacatgtattttgaaacgga 146  Q
    ||| |||||   ||| ||||| |||||||||    
T  53559850 tcttcaaaagcaacaagtattgtgaaacgga 53559880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 153
Target Start/End: Complemental strand, 4235803 - 4235751
Alignment:
Q  100 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||  |||||||||||||||||| || |||||    
T  4235803 cttggttagtgcaatttctccaaaa-cgacatgtattttgaaacgaagtgagta 4235751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 153
Target Start/End: Original strand, 12095423 - 12095464
Alignment:
Q  112 aatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  12095423 aatttctctaaaatggacatatattttgaaacggagggagta 12095464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 17755284 - 17755221
Alignment:
Q  24 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaa 87  Q
    |||||||||||||||||| | |||||||||||| ||||| |||  ||||| |||||||| ||||    
T  17755284 gaaataataaatgattaaagatattatagaaaaaacacaaataaattcataaaaaataaaaaaa 17755221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 19056604 - 19056541
Alignment:
Q  24 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaa 87  Q
    |||||||||||||||||| | |||||||||||| ||||| |||  ||||| |||||||| ||||    
T  19056604 gaaataataaatgattaaagatattatagaaaaaacacaaataaattcataaaaaataaaaaaa 19056541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 44522567 - 44522491
Alignment:
Q  25 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 103  Q
    |||||||||||| ||||  ||||||||||||| |||||  |  |||||| |||||||| |||||||||||| |||||||    
T  44522567 aaataataaatggttaaaagtattatagaaaaaacaca--tgatttcataaaaaataataaaatttatttgatttcttg 44522491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 155
Target Start/End: Original strand, 13499569 - 13499599
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaat 155  Q
    |||||||||||||||||||||||||||||||    
T  13499569 tggacatgtattttgaaacggagggagtaat 13499599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 24064361 - 24064283
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 94  Q
    |||| ||| ||||||||||||  |||||||||||||||||| |||||   | ||| || ||| ||||||||||||||||    
T  24064361 aatagaataaaataataaatgggtaagggtattatagaaaaaacacagtgaattttataaaatataacaaaatttattt 24064283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 26105176 - 26105079
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattat-agaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 105  Q
    ||||| |||||| |||||||||||||||| ||||||||||| | | |||||||| | | |   |||| ||||||||||||||||||||| ||| |||||    
T  26105176 gagaaaaaaatataatgaaataataaatggttaagggtattgtaaaaaaacaca-aaaaaaaatcattaaaaataacaaaatttatttgatttattggt 26105079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 155
Target Start/End: Original strand, 42761717 - 42761747
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaat 155  Q
    |||||||||||||||||||||||||||||||    
T  42761717 tggacatgtattttgaaacggagggagtaat 42761747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 52805166 - 52805244
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 94  Q
    |||| ||| ||||||||||||  |||| ||||||||||||| |  || | | ||||||||||||| |||||||||||||    
T  52805166 aatataataaaataataaatgtgtaagagtattatagaaaaaatgcaaacaatttcatcaaaaatgacaaaatttattt 52805244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 6901696 - 6901655
Alignment:
Q  21 aatgaaataataaatgattaagggtattatagaaaacacaca 62  Q
    ||||||||||||||||| ||||||||||| |||||| |||||    
T  6901696 aatgaaataataaatgagtaagggtattagagaaaaaacaca 6901655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 20765224 - 20765187
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaatatttata 162  Q
    |||||||||||||| |||||||||||||| ||||||||    
T  20765224 tggacatgtattttaaaacggagggagtattatttata 20765187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 4226759 - 4226716
Alignment:
Q  100 cttggttagtgcaatttctccaaaatggacatgtattttgaaacg 144  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||    
T  4226759 cttggttactgcaatttctccaaaa-cgacatgtattttgaaacg 4226716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 6910568 - 6910596
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  6910568 tggacatgtattttgaaacggagggagta 6910596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 20765430 - 20765458
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  20765430 tggacatgtattttgaaacggagggagta 20765458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 27010502 - 27010474
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  27010502 tggacatgtattttgaaacggagggagta 27010474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 27010708 - 27010736
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  27010708 tggacatgtattttgaaacggagggagta 27010736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 42490430 - 42490458
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  42490430 tggacatgtattttgaaacggagggagta 42490458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 42761511 - 42761483
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  42761511 tggacatgtattttgaaacggagggagta 42761483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 127 - 159
Target Start/End: Original strand, 44562020 - 44562052
Alignment:
Q  127 gacatgtattttgaaacggagggagtaatattt 159  Q
    ||||||||||||||| |||||||||||||||||    
T  44562020 gacatgtattttgaatcggagggagtaatattt 44562052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 9e-72; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 39938315 - 39938170
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39938315 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 39938216  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  39938215 gtgcaatttctccaaaatggtcatgtattttgaaacggagggagta 39938170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 8 - 152
Target Start/End: Complemental strand, 23366934 - 23366790
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23366934 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggtttcttggtta 23366835  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagt 152  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  23366834 gtgcaatttctccaaaatggacatgtattttgaaacggagggagt 23366790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 3519047 - 3518908
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3519047 aaaataaaatgaaataataaattattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 3518948  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3518947 tttctccaaaatggacatgtattttgaaacggagggagta 3518908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 1102648 - 1102503
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1102648 gagaaaaaaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 1102549  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
     |||||||||||||||||||||||||||||||||||||||||||||    
T  1102548 ctgcaatttctccaaaatggacatgtattttgaaacggagggagta 1102503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 37673887 - 37674014
Alignment:
Q  26 aataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaat 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37673887 aataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatttctccaaaat 37673986  T
Q  126 ggacatgtattttgaaacggagggagta 153  Q
    | ||||||||||||||||||||||||||    
T  37673987 gaacatgtattttgaaacggagggagta 37674014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 12969877 - 12970016
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||| ||| |||||||||||| ||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12969877 aaaatagaataaaataataaatggttaagggtattatagaaaatatacacataatttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 12969976  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12969977 tttctccaaaatggacatgtattttgaaacggagggagta 12970016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 1646432 - 1646317
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||     
T  1646432 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttatttagtttcttggttg 1646335  T
Q  108 gtgcaatttctccaaaat 125  Q
     |||||||||||||||||    
T  1646334 ctgcaatttctccaaaat 1646317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 22388273 - 22388335
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaa 76  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22388273 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaa 22388335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 100 - 153
Target Start/End: Original strand, 34224378 - 34224431
Alignment:
Q  100 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34224378 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 34224431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 14779914 - 14779838
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 94  Q
    |||| ||||||||||||||||| ||||  |||||||||||| ||||| ||| ||||||||||||||| |||||||||||    
T  14779914 aatataatgaaataataaatgagtaag--tattatagaaaaaacacaaataatttcatcaaaaataaaaaaatttattt 14779838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 35179097 - 35179164
Alignment:
Q  38 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 105  Q
    |||||| |||||||||||| ||||||| | |||||||||||||||||||||||||||  |||||||||    
T  35179097 ttaaggttattatagaaaaaacacacaaaatttcatcaaaaataacaaaatttatttcatttcttggt 35179164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 18078193 - 18078104
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 105  Q
    |||| |||||| ||||||||| | ||| |||||||||||||  |||| | |  ||||||||||||||||||||||||||| ||| |||||    
T  18078193 aatagaatgaattaataaatggtcaagagtattatagaaaatccacaaaaaaattcatcaaaaataacaaaatttatttgattttttggt 18078104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 19976468 - 19976380
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 105  Q
    |||| ||| |||||||||||   |||||||||||||||||| | ||||||| ||| ||||||| || ||||||||||||| |||||||||    
T  19976468 aatataataaaataataaataggtaagggtattatagaaaaaa-acacataattttatcaaaagtaccaaaatttatttgatttcttggt 19976380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 39562037 - 39562162
Alignment:
Q  26 aataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaat 125  Q
    ||||||||||| ||||||||||||  ||||| ||| | ||| |||| ||||||||||||||||||||||| ||| ||| |  ||| ||||||   ||||     
T  39562037 aataataaatggttaagggtatta--gaaaaaacaaaaataatttcttcaaaaataacaaaatttatttgattttttgatatgtgtaatttccttaaaag 39562134  T
Q  126 ggacatgtattttgaaacggagggagta 153  Q
     |||| ||||  ||||||||||||||||    
T  39562135 cgacaagtatcatgaaacggagggagta 39562162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 1002870 - 1002997
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 115  Q
    |||| ||||||||||||||||| ||| | |||| | ||||| ||| |   | ||||||||||||||| |||||||||||| |||||| ||  ||| |||     
T  1002870 aatagaatgaaataataaatgagtaatgttattgtcgaaaaaacaaaaggaatttcatcaaaaataataaaatttatttgatttcttagtatgtgtaata 1002969  T
Q  116 tctccaaaatggacatgtattttgaaac 143  Q
    ||  |||||  |||||||||||||||||    
T  1002970 tcctcaaaagcgacatgtattttgaaac 1002997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 32840312 - 32840401
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaa---acacacacatattttcatcaaaaataacaaaatttatttggtttctt 102  Q
    |||| |||||||||||||||   ||| |||||||||||||   | | ||||| | |||||||||||||||||||||||||||| ||||||    
T  32840312 aatagaatgaaataataaatcgataatggtattatagaaagaaaaaaacacagaatttcatcaaaaataacaaaatttatttgatttctt 32840401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 156
Target Start/End: Complemental strand, 12969778 - 12969737
Alignment:
Q  115 ttctccaaaatggacatgtattttgaaacggagggagtaata 156  Q
    |||||||||||||||| ||||| |||||||||||||||||||    
T  12969778 ttctccaaaatggacaagtattatgaaacggagggagtaata 12969737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 160
Target Start/End: Complemental strand, 11841621 - 11841586
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaatattta 160  Q
    |||||||||||||||||||||||||||||| |||||    
T  11841621 tggacatgtattttgaaacggagggagtaacattta 11841586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 159
Target Start/End: Original strand, 5405230 - 5405264
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaatattt 159  Q
    ||||||||||||||||||||||||||||| |||||    
T  5405230 tggacatgtattttgaaacggagggagtattattt 5405264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 40756949 - 40756911
Alignment:
Q  115 ttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  40756949 ttctccaaaatggacaagtattatgaaacggagggagta 40756911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 154
Target Start/End: Original strand, 44365391 - 44365420
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaa 154  Q
    ||||||||||||||||||||||||||||||    
T  44365391 tggacatgtattttgaaacggagggagtaa 44365420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 2183191 - 2183219
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  2183191 tggacatgtattttgaaacggagggagta 2183219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 7608283 - 7608311
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  7608283 tggacatgtattttgaaacggagggagta 7608311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 8042050 - 8042014
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaatatttat 161  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  8042050 tggacatatattttgaaacggagggagtagtatttat 8042014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 8042256 - 8042284
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  8042256 tggacatgtattttgaaacggagggagta 8042284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 157
Target Start/End: Complemental strand, 13125173 - 13125141
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaatat 157  Q
    |||||||||||||||||||||| ||||||||||    
T  13125173 tggacatgtattttgaaacggatggagtaatat 13125141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 19141094 - 19141066
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  19141094 tggacatgtattttgaaacggagggagta 19141066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 19141300 - 19141328
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  19141300 tggacatgtattttgaaacggagggagta 19141328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 39358174 - 39358146
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  39358174 tggacatgtattttgaaacggagggagta 39358146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 157
Target Start/End: Original strand, 39358401 - 39358433
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaatat 157  Q
    |||||||||||||||||| ||||||||||||||    
T  39358401 tggacatgtattttgaaatggagggagtaatat 39358433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 137; Significance: 3e-71; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 30720624 - 30720772
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30720624 gagaaaaaaataaaatgaaataatagatgattaagggtattataaaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 30720723  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaata 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30720724 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaata 30720772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 12806991 - 12807130
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12806991 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttaatgcaa 12807090  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12807091 tttctccaaaatggacatgtattttgaaacggagggagta 12807130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 25773788 - 25773649
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25773788 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaa 25773689  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25773688 tttctccaaaatggacatgtattttgaaacggagggagta 25773649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 10285189 - 10285334
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10285189 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttagtttcttggtta 10285288  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
     ||||||||||||||||| ||||| |||||||||||||||||||||    
T  10285289 atgcaatttctccaaaatagacatctattttgaaacggagggagta 10285334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 40886742 - 40886887
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||    
T  40886742 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaatacacacatattttcatcaaaaataacaaaatttattcgatttcttggtta 40886841  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||    
T  40886842 gtgcaatttctccaaaatgaacatgtattttgaaacggatggagta 40886887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 8 - 160
Target Start/End: Original strand, 36561231 - 36561383
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  36561231 gagaaaaaaataaaatgaaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttgatta 36561330  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaatattta 160  Q
     |||||||| || |||||||||||||||||||||||||| |||||||||||||    
T  36561331 ctgcaatttttctaaaatggacatgtattttgaaacggatggagtaatattta 36561383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 37900762 - 37900901
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||| |||||||||||| |||||    
T  37900762 aaaatagaatgaaataataaatggttaagggtattatagaaaacacacatataatttcatcaaaaatatcaaaatttatttagtttcttggttactgcaa 37900861  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  37900862 tttctccaaaatggatgtgtattttgaaacggagggagta 37900901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 14 - 142
Target Start/End: Original strand, 7277560 - 7277688
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||| |||||||||||||||| |||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||| | |||    
T  7277560 aaaatataatgaaataataaatggttaaaggtattatagaaaacacacacataatttgatcaaaaataacaaaatttatttggtttattggttactccaa 7277659  T
Q  114 tttctccaaaatggacatgtattttgaaa 142  Q
    |||||||||||| ||||||||||||||||    
T  7277660 tttctccaaaatagacatgtattttgaaa 7277688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 25683366 - 25683467
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||| ||| |||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||    
T  25683366 aaaatagaataaaataataaatggttaagggtattatagaaaacacacacataattttatcaaaaataacaaaatttatttggtttcttggttattgcaa 25683465  T
Q  114 tt 115  Q
    ||    
T  25683466 tt 25683467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 19 - 153
Target Start/End: Complemental strand, 16983393 - 16983258
Alignment:
Q  19 aaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat--ttatttggtttcttggttagtgcaattt 116  Q
    ||||| ||||||||| || ||||||||||| ||||||| ||||| ||  |||||||||||| || ||||   ||||||||||||||||||| ||||||||    
T  16983393 aaaataaaataataa-tggttaagggtattgtagaaaaaacacatatcatttcatcaaaaaaaaaaaaaaaattatttggtttcttggttactgcaattt 16983295  T
Q  117 ctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||||||||||||||||| |||||||||    
T  16983294 ctccaaaatggacatgtattttgaaacagagggagta 16983258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 734478 - 734625
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 115  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||| | | ||||||||| ||| |||||||||||||| ||  |||||  | | ||||    
T  734478 aatagaatgaaataataaatgagtaagggtattatagaaaa-acacaaagaatttcatcaataatgacaaaatttatttgattctttggtatgagtaatt 734576  T
Q  116 tctccaaaatggacatgtattttgaaacggagggagtaatatttatacc 164  Q
    ||| ||||||||||| ||||| ||||||||||||| || ||||||||||    
T  734577 tcttcaaaatggacaagtattgtgaaacggagggaatattatttatacc 734625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 30403101 - 30403191
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacaca-cacatattttcatcaaaaataacaaaatttatttggtttcttggt 105  Q
    ||||||||||||||| ||||||||||| ||||||||||||| | | |||| | ||||||||||||||||||||||||||||||||||||||    
T  30403101 aataaaatgaaataacaaatgattaagagtattatagaaaaaaaaacacagaatttcatcaaaaataacaaaatttatttggtttcttggt 30403191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 16 - 153
Target Start/End: Complemental strand, 39071020 - 39070883
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacac-acatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaat 114  Q
    |||| ||||||||||||||||| |||||||||||||||||| |||| ||| | ||||||||||||| |||| ||||||||| || |||  |  ||| |||    
T  39071020 aatagaatgaaataataaatgagtaagggtattatagaaaaaacacaacaga-tttcatcaaaaatgacaacatttatttgattccttaatatgtgtaat 39070922  T
Q  115 ttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||| ||||||| ||| ||||| ||||||||||||||||    
T  39070921 ttcttcaaaatgaacaagtattgtgaaacggagggagta 39070883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 16 - 159
Target Start/End: Complemental strand, 11319696 - 11319553
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 115  Q
    |||| ||||||||||||||||| |||||||||||||||||| | ||| | | |||||| |||||| |||| ||||||||| ||  || ||  ||| ||||    
T  11319696 aatagaatgaaataataaatgagtaagggtattatagaaaaaaaacaaagaatttcataaaaaattacaacatttatttgattcattagtatgtgtaatt 11319597  T
Q  116 tctccaaaatggacatgtattttgaaacggagggagtaatattt 159  Q
    ||| |||||||||||  |||| ||||||||||| |||| |||||    
T  11319596 tcttcaaaatggacaaatattgtgaaacggaggaagtattattt 11319553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 23098386 - 23098461
Alignment:
Q  28 taataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 103  Q
    ||||||||| ||||||||||||||| |||||  |||||| ||||||||||||||||||||||||||| ||||||||    
T  23098386 taataaatggttaagggtattataggaaacatgcacataatttcatcaaaaataacaaaatttatttagtttcttg 23098461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 15305216 - 15305265
Alignment:
Q  104 gttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15305216 gttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 15305265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 1056422 - 1056498
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatt 93  Q
    |||| |||||||||||||||||| ||  ||||||||||||| ||||| | | |||||| |||||||||||||||||||    
T  1056422 aatataatgaaataataaatgatcaatagtattatagaaaa-acacaaagaatttcattaaaaataacaaaatttatt 1056498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 8086264 - 8086301
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaatatttata 162  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  8086264 tggacatgtattttgaaacggagggagtattatttata 8086301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 153
Target Start/End: Complemental strand, 15304863 - 15304822
Alignment:
Q  112 aatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||| |||||||||||||||||| ||||||||||||||    
T  15304863 aatttctctaaaatggacatgtattttaaaacggagggagta 15304822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 153
Target Start/End: Complemental strand, 11796559 - 11796451
Alignment:
Q  45 tattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacg 144  Q
    |||||||||| | ||||| | | |||||||||||||||||||||| ||||  |||||||||   || ||||||| |||||  |||| ||| | ||||| |    
T  11796559 tattatagaacaaacacatagaatttcatcaaaaataacaaaattaatttaatttcttggtatctgtaatttcttcaaaaatgacaagtagtgtgaaaag 11796460  T
Q  145 gagggagta 153  Q
    |||||||||    
T  11796459 gagggagta 11796451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 16054249 - 16054173
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 94  Q
    |||| ||| |||||||||||| | |||| |||||||||||| ||||| |   |||||| ||||||||||||||||||||    
T  16054249 aatagaataaaataataaatggtcaaggatattatagaaaaaacacaaaa--tttcataaaaaataacaaaatttattt 16054173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 156
Target Start/End: Original strand, 33387453 - 33387484
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaata 156  Q
    ||||||||||||||||||||||||||||||||    
T  33387453 tggacatgtattttgaaacggagggagtaata 33387484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 25683267 - 25683229
Alignment:
Q  115 ttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  25683267 ttctccaaaatggacaagtattatgaaacggagggagta 25683229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 154
Target Start/End: Original strand, 978311 - 978340
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaa 154  Q
    ||||||||||||||||||||||||||||||    
T  978311 tggacatgtattttgaaacggagggagtaa 978340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 40156226 - 40156189
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaatatttata 162  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  40156226 tggatatgtattttgaaacggagggagtagtatttata 40156189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 978105 - 978077
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  978105 tggacatgtattttgaaacggagggagta 978077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 9502655 - 9502627
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  9502655 tggacatgtattttgaaacggagggagta 9502627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 14634185 - 14634157
Alignment:
Q  125 tggacatgtattttgaaacggagggagta 153  Q
    |||||||||||||||||||||||||||||    
T  14634185 tggacatgtattttgaaacggagggagta 14634157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 127 - 155
Target Start/End: Original strand, 24992374 - 24992402
Alignment:
Q  127 gacatgtattttgaaacggagggagtaat 155  Q
    |||||||||||||||||||||||||||||    
T  24992374 gacatgtattttgaaacggagggagtaat 24992402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 40886648 - 40886604
Alignment:
Q  115 ttctccaaaatggacatgtattttgaaacggagggagtaatattt 159  Q
    ||||| |||||||||| ||||| |||||||||||||||| |||||    
T  40886648 ttctctaaaatggacaagtattatgaaacggagggagtagtattt 40886604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 112; Significance: 3e-56; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 45593 - 45454
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||| ||| |||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  45593 aaaatagaataaaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttggtttcttggttggtgcaa 45494  T
Q  114 tttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  45493 tttctccaaaatgaacatgtattttgaaacggagggagta 45454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 156
Target Start/End: Original strand, 45692 - 45733
Alignment:
Q  115 ttctccaaaatggacatgtattttgaaacggagggagtaata 156  Q
    ||||| |||||||||| ||||| |||||||||||||||||||    
T  45692 ttctctaaaatggacaagtattatgaaacggagggagtaata 45733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1770 (Bit Score: 95; Significance: 4e-46; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 8 - 155
Target Start/End: Complemental strand, 307 - 168
Alignment:
Q  8 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 107  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||        |||||    
T  307 gagaaaaaaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttattt--------ggtta 216  T
Q  108 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 155  Q
     ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  215 ctgcaatttctccaaagtggatatgtattttgaaacggagggagtaat 168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 403 - 525
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 113  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||  || ||| |||||||||||||||||||||||| ||| ||| ||| |||||    
T  403 aaaatagaatgaaataataaatgattaagggtattataaaaaacacaca--taattttatcaaaaataacaaaatttatttgattttttgattactgcaa 500  T
Q  114 tttctccaaaatggacatgtatttt 138  Q
    |||| |||||||| |||||||||||    
T  501 tttcgccaaaatgaacatgtatttt 525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 56; Significance: 8e-23; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 70961 - 70874
Alignment:
Q  16 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 103  Q
    |||| |||||||||||||||| |||||||| ||| |||||| ||||||| | |||||||||||||||||||||||||||| |||||||    
T  70961 aatagaatgaaataataaatggttaagggtgttacagaaaaaacacacagaatttcatcaaaaataacaaaatttatttgatttcttg 70874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 100 - 153
Target Start/End: Complemental strand, 23520 - 23467
Alignment:
Q  100 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 153  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23520 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 23467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 23872 - 23916
Alignment:
Q  112 aatttctccaaaatggacatgtattttgaaacggagggagtaata 156  Q
    |||||||| |||||||||||||||||||||||||| |||||||||    
T  23872 aatttctctaaaatggacatgtattttgaaacggatggagtaata 23916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 65301 - 65375
Alignment:
Q  14 aaaataaaatgaaataataaatgattaagggtattatag-aaaacacacacatattttcatcaaaaataacaaaa 87  Q
    |||||| |||||||||||||||| ||||||||||||||| |||| ||||| ||| ||||||||||||||| ||||    
T  65301 aaaatagaatgaaataataaatggttaagggtattatagaaaaaaacacatataatttcatcaaaaataataaaa 65375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 155
Target Start/End: Complemental strand, 100675 - 100645
Alignment:
Q  125 tggacatgtattttgaaacggagggagtaat 155  Q
    |||||||||||||||||||||||||||||||    
T  100675 tggacatgtattttgaaacggagggagtaat 100645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 127 - 159
Target Start/End: Complemental strand, 67796 - 67764
Alignment:
Q  127 gacatgtattttgaaacggagggagtaatattt 159  Q
    |||||||||||||||||||| ||||||||||||    
T  67796 gacatgtattttgaaacggatggagtaatattt 67764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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