View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21665_high_13 (Length: 324)
Name: NF21665_high_13
Description: NF21665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21665_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 29 - 319
Target Start/End: Complemental strand, 47680898 - 47680601
Alignment:
| Q |
29 |
ataccatatactaccaaatatacatggatgtacaaagtaatagctacattatacactatcgccaaaaaatccattattgttgtatagtattgatgatcat |
128 |
Q |
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| T |
47680898 |
ataccatatactaccaattatacatggatgtacaaagtaatagctacattatacactatcgccaaaaaatccattattgttgta--gtattgatgatcat |
47680801 |
T |
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| Q |
129 |
caatgaattgagtcaaaccctaataaacgcaattggtttgtgtctcggtttttcaaacatgatgggtggttagggtgtcacaacacaattggtttctgtg |
228 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47680800 |
caatgaattgagtcaaaccctaataaacgcaattggtttgtgtctcggtttttcaaacatgatgggtggttagggtgtcacaacacaattggtttctgtg |
47680701 |
T |
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| Q |
229 |
tttaaaaattcgaatcctgtcttttccatc---------ctttagggtagccccccatgccttgctgtcactgcatgtaggtccttcattctctgctcct |
319 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47680700 |
tttaaaaattcgaatcctgtcttttccatccttgcttttctttagggtagccccccatgccttgctgtcactgcatgtaggtccttcattctctgctcct |
47680601 |
T |
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