View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21666_high_6 (Length: 302)
Name: NF21666_high_6
Description: NF21666
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21666_high_6 |
 |  |
|
| [»] scaffold0107 (2 HSPs) |
 |  |  |
|
| [»] scaffold0076 (2 HSPs) |
 |  |  |
|
| [»] scaffold0023 (4 HSPs) |
 |  |  |
|
| [»] scaffold0213 (1 HSPs) |
 |  |  |
|
| [»] scaffold0761 (1 HSPs) |
 |  |  |
|
| [»] scaffold0467 (1 HSPs) |
 |  |  |
|
| [»] scaffold0383 (1 HSPs) |
 |  |  |
|
| [»] scaffold1666 (1 HSPs) |
 |  |  |
|
| [»] scaffold0012 (1 HSPs) |
 |  |  |
|
| [»] scaffold1500 (1 HSPs) |
 |  |  |
|
| [»] scaffold0066 (2 HSPs) |
 |  |  |
|
| [»] scaffold0191 (1 HSPs) |
 |  |  |
|
| [»] scaffold0017 (1 HSPs) |
 |  |  |
|
| [»] scaffold0892 (1 HSPs) |
 |  |  |
|
| [»] scaffold0022 (1 HSPs) |
 |  |  |
|
| [»] scaffold0183 (1 HSPs) |
 |  |  |
|
| [»] scaffold0084 (1 HSPs) |
 |  |  |
|
| [»] scaffold0003 (1 HSPs) |
 |  |  |
|
| [»] scaffold0369 (1 HSPs) |
 |  |  |
|
| [»] scaffold0529 (1 HSPs) |
 |  |  |
|
| [»] scaffold0155 (1 HSPs) |
 |  |  |
|
| [»] scaffold0116 (1 HSPs) |
 |  |  |
|
| [»] scaffold0215 (2 HSPs) |
 |  |  |
|
| [»] scaffold1711 (1 HSPs) |
 |  |  |
|
| [»] scaffold0026 (2 HSPs) |
 |  |  |
|
| [»] scaffold0420 (1 HSPs) |
 |  |  |
|
| [»] scaffold0139 (2 HSPs) |
 |  |  |
|
| [»] scaffold0092 (1 HSPs) |
 |  |  |
|
| [»] scaffold0361 (1 HSPs) |
 |  |  |
|
| [»] scaffold0516 (1 HSPs) |
 |  |  |
|
| [»] scaffold0132 (1 HSPs) |
 |  |  |
|
| [»] scaffold0125 (1 HSPs) |
 |  |  |
|
| [»] scaffold0266 (1 HSPs) |
 |  |  |
|
| [»] scaffold0175 (1 HSPs) |
 |  |  |
|
| [»] scaffold0077 (1 HSPs) |
 |  |  |
|
| [»] scaffold0302 (1 HSPs) |
 |  |  |
|
| [»] scaffold0025 (2 HSPs) |
 |  |  |
|
| [»] scaffold1542 (1 HSPs) |
 |  |  |
|
| [»] scaffold0413 (1 HSPs) |
 |  |  |
|
| [»] scaffold0075 (1 HSPs) |
 |  |  |
|
| [»] scaffold0028 (1 HSPs) |
 |  |  |
|
| [»] scaffold0008 (1 HSPs) |
 |  |  |
|
| [»] scaffold0195 (2 HSPs) |
 |  |  |
|
| [»] scaffold0162 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr6 (Bit Score: 253; Significance: 1e-141; HSPs: 26)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 16376621 - 16376349
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
16376621 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
16376522 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16376521 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
16376422 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
16376421 |
tcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatac |
16376349 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 16383945 - 16383673
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
16383945 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
16383846 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16383845 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
16383746 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
16383745 |
tcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatac |
16383673 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 10488707 - 10488979
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
10488707 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
10488806 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10488807 |
gcatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
10488906 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
10488907 |
tcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatac |
10488979 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 16556387 - 16556115
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
16556387 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
16556288 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16556287 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
16556188 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
16556187 |
tcaagcacaagaaaatagcatcacagcaggagcacgaatttaacaacaattgttcaccaacccattttcatac |
16556115 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 16632943 - 16632671
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
16632943 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
16632844 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16632843 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
16632744 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
16632743 |
tcaagcacaagaaaatagcatcacagcaggagcacgaatttaacaacaattgttcaccaacccattttcatac |
16632671 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 22225986 - 22225714
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22225986 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
22225887 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22225886 |
acatttcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
22225787 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22225786 |
tcatgcacaagaaaatagcatcacagaaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
22225714 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 1556013 - 1556285
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||||| |||||| ||||||||||||||||| |||| |||||||||||||| ||||||||||||||| ||| |
|
|
| T |
1556013 |
atccacaattaagtatacccaattcataattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattacatctcatttcaattaaa |
1556112 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
1556113 |
acatatcaaatttcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaat |
1556212 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
1556213 |
tcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatac |
1556285 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 19610026 - 19610298
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||| |||||||||||||||| |||||||||||| |||| ||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||| |
|
|
| T |
19610026 |
atccataattaagtatacccaagtcatgattcactcacaacagcatcagttaacaataacaacatcaatggaatatgaactacatctcatttcaatcaaa |
19610125 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| || |
|
|
| T |
19610126 |
acatatcaaatttcatcaatgaagtataattttataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataaccatcgat |
19610225 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||| ||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
19610226 |
tcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaataattgttcatcaacccattttcatac |
19610298 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 73 - 273
Target Start/End: Original strand, 16231972 - 16232172
Alignment:
| Q |
73 |
atatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaattt |
172 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16231972 |
atatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaattt |
16232071 |
T |
 |
| Q |
173 |
cacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcata |
272 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
16232072 |
cacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcata |
16232171 |
T |
 |
| Q |
273 |
c |
273 |
Q |
| |
|
| |
|
|
| T |
16232172 |
c |
16232172 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 73 - 273
Target Start/End: Complemental strand, 18086999 - 18086799
Alignment:
| Q |
73 |
atatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaattt |
172 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18086999 |
atatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaattt |
18086900 |
T |
 |
| Q |
173 |
cacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcata |
272 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
18086899 |
cacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcata |
18086800 |
T |
 |
| Q |
273 |
c |
273 |
Q |
| |
|
| |
|
|
| T |
18086799 |
c |
18086799 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 73 - 273
Target Start/End: Complemental strand, 13620970 - 13620770
Alignment:
| Q |
73 |
atatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaattt |
172 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
13620970 |
atatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgcaattt |
13620871 |
T |
 |
| Q |
173 |
cacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcata |
272 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||| ||||||||||| | ||| |||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
13620870 |
cacccacaaacataccataatcatcaattcatgcacaagaaaatagcattacaacaagagcacgaatttagcaacaattgttcatcaacccattttcata |
13620771 |
T |
 |
| Q |
273 |
c |
273 |
Q |
| |
|
| |
|
|
| T |
13620770 |
c |
13620770 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 73 - 273
Target Start/End: Original strand, 23977849 - 23978049
Alignment:
| Q |
73 |
atatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaattt |
172 |
Q |
| |
|
|||||| | |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23977849 |
atatgatttacatctcatttcaaccaaaacatatcaaatttcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaattt |
23977948 |
T |
 |
| Q |
173 |
cacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcata |
272 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||| ||||||||| | | ||| |||||||||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
23977949 |
cacccacaaacataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcata |
23978048 |
T |
 |
| Q |
273 |
c |
273 |
Q |
| |
|
| |
|
|
| T |
23978049 |
c |
23978049 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 131 - 273
Target Start/End: Original strand, 19299375 - 19299517
Alignment:
| Q |
131 |
ttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaag |
230 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||| | |||||||| |
|
|
| T |
19299375 |
ttcataacttaacatttatacatactttgaaacatgtaattccacccataaacataccataatcatcaattcaaacacaagaaaatagcattacagcaag |
19299474 |
T |
 |
| Q |
231 |
agcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
19299475 |
agcacgaatttaacaacaattgtccatcaacccattttcatac |
19299517 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 62 - 273
Target Start/End: Original strand, 29665942 - 29666153
Alignment:
| Q |
62 |
acattaatggaatatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaa |
161 |
Q |
| |
|
|||| ||| ||| |||||||| |||||||||||| | ||| || |||| |||| ||||| || | ||||||||||||| |||||||| ||||||||||| |
|
|
| T |
29665942 |
acatcaattgaacatgaatcatatctcatttcaacaacaacttagcaaaattcaccaattgagtacaatttcataacttgacatttatgcatactttgaa |
29666041 |
T |
 |
| Q |
162 |
acatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaac |
261 |
Q |
| |
|
||||||||||||||||| || ||||| || |||||||||||| |||||||||||| | ||||||| ||||||||||||||||||||||| | ||||| | |
|
|
| T |
29666042 |
acatgtaatttcacccacaatcatacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatccatcacc |
29666141 |
T |
 |
| Q |
262 |
ccattttcatac |
273 |
Q |
| |
|
|||||||||||| |
|
|
| T |
29666142 |
ccattttcatac |
29666153 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 167 - 273
Target Start/End: Complemental strand, 22251648 - 22251542
Alignment:
| Q |
167 |
taatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccatt |
266 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22251648 |
taatttcacccataaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcatcaacccatt |
22251549 |
T |
 |
| Q |
267 |
ttcatac |
273 |
Q |
| |
|
||||||| |
|
|
| T |
22251548 |
ttcatac |
22251542 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 33314466 - 33314387
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaat |
80 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33314466 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaat |
33314387 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 113 - 273
Target Start/End: Complemental strand, 29869911 - 29869752
Alignment:
| Q |
113 |
tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataaga |
212 |
Q |
| |
|
|||| ||||| ||| ||||||| ||||| ||| |||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | |||||| |
|
|
| T |
29869911 |
tcattaattaggcaaaatttcacaacttgacacttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataaga |
29869812 |
T |
 |
| Q |
213 |
aaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|| ||| || | ||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
29869811 |
aac-agcaacataacaagagcacgaatttgacatgaattgttcatcaacccattttcatac |
29869752 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 27740860 - 27741021
Alignment:
| Q |
15 |
atacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaaacatatcaaatttc |
114 |
Q |
| |
|
||||||||| ||||||||| |||| | |||||| ||| | |||||||| ||| ||| |||||||| |||||| ||||| | || || |||| ||| |
|
|
| T |
27740860 |
atacccaaaccatgattcatccacaacaacatcagataatagcaaccacatcaattgaacatgaatcatatctcaattcaacaacgacttagcaaaattc |
27740959 |
T |
 |
| Q |
115 |
atcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacc |
176 |
Q |
| |
|
| ||||| |||| ||||||||||||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
27740960 |
accaattgagcacaatttcataacttgacatttatacatacttcgaaacatgtaatttcacc |
27741021 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 14626243 - 14626124
Alignment:
| Q |
130 |
tttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaa |
229 |
Q |
| |
|
|||||||||||| ||||| |||||| |||||| |||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | ||||||||| |
|
|
| T |
14626243 |
tttcataacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagcaa |
14626146 |
T |
 |
| Q |
230 |
gagcacgaatttaacaacaatt |
251 |
Q |
| |
|
||||||||||||| ||| |||| |
|
|
| T |
14626145 |
gagcacgaatttagcaataatt |
14626124 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 273
Target Start/End: Complemental strand, 1650189 - 1650077
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaa |
260 |
Q |
| |
|
|||||||||||||||| | || ||||| || |||||||||||| ||||| || || | |||||| |||||||||||| || || ||||||||||||| |
|
|
| T |
1650189 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcacagtaagagcacgaatctagcatgaattgttcatcaa |
1650090 |
T |
 |
| Q |
261 |
cccattttcatac |
273 |
Q |
| |
|
||||||||||||| |
|
|
| T |
1650089 |
cccattttcatac |
1650077 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 194 - 273
Target Start/End: Complemental strand, 16825803 - 16825724
Alignment:
| Q |
194 |
catcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|||||||||| ||||| || ||| | |||||||||||||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
16825803 |
catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatac |
16825724 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 273
Target Start/End: Original strand, 25175731 - 25175843
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaa |
260 |
Q |
| |
|
|||||||||||||||| | || |||| | | |||||||||| ||||| || ||| | ||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
25175731 |
aacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacacagcaagagcacgaatttagcatgaattgttcatcaa |
25175830 |
T |
 |
| Q |
261 |
cccattttcatac |
273 |
Q |
| |
|
|||||||||||| |
|
|
| T |
25175831 |
tccattttcatac |
25175843 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 251
Target Start/End: Original strand, 15862592 - 15862728
Alignment:
| Q |
114 |
catcaattaagcataattt-cataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataaga |
212 |
Q |
| |
|
|||||||| |||| ||||| |||||||| ||||||||||||| || ||||||| |||||||| | || ||||| || |||||||||||| ||||| | |
|
|
| T |
15862592 |
catcaattgagcacaattttcataacttcacatttatacataattg--aacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaa |
15862689 |
T |
 |
| Q |
213 |
aaatagcttcacagcaagagcacgaatttaacaacaatt |
251 |
Q |
| |
|
| ||| | |||||| |||||||||||||| ||||||| |
|
|
| T |
15862690 |
acataacatcacagttagagcacgaatttagtaacaatt |
15862728 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 251
Target Start/End: Complemental strand, 35009595 - 35009445
Alignment:
| Q |
100 |
aacatatcaaatttcatcaattaagcataattt-cataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatca |
198 |
Q |
| |
|
|||||| |||| |||| ||||| |||| ||||| || ||||| |||||| |||||| || |||||||||||||||| | || ||||| || ||||||| |
|
|
| T |
35009595 |
aacatagcaaaattcaccaattgagcacaattttcaaaacttcacatttttacataattg--aacatgtaatttcaccaacaatcatacaattatcatca |
35009498 |
T |
 |
| Q |
199 |
attcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaatt |
251 |
Q |
| |
|
||||| ||||| || || | |||||| |||||||||||||| |||||||| |
|
|
| T |
35009497 |
attcatgcatacaaacttaacatcacagttagagcacgaatttagcaacaatt |
35009445 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 273
Target Start/End: Complemental strand, 27654007 - 27653955
Alignment:
| Q |
221 |
tcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|||||||||||||||||||||| || | ||||||||||| |||||||||||| |
|
|
| T |
27654007 |
tcacagcaagagcacgaatttagcatgatttgttcatcaatccattttcatac |
27653955 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 251
Target Start/End: Complemental strand, 1657890 - 1657754
Alignment:
| Q |
114 |
catcaattaagcataattt-cataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataaga |
212 |
Q |
| |
|
|||||||| |||| ||||| |||||||| |||||| |||||| || ||||||| |||||||| | || ||||| || |||||||||||| |||| | |
|
|
| T |
1657890 |
catcaattgagcacaattttcataacttcacatttttacataattg--aacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatccaa |
1657793 |
T |
 |
| Q |
213 |
aaatagcttcacagcaagagcacgaatttaacaacaatt |
251 |
Q |
| |
|
| ||| | |||||| |||||||||||||| |||||||| |
|
|
| T |
1657792 |
acataacatcacagttagagcacgaatttagcaacaatt |
1657754 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 253; Significance: 1e-141; HSPs: 25)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 1467987 - 1467715
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
1467987 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
1467888 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1467887 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
1467788 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
1467787 |
tcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatac |
1467715 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 49232444 - 49232716
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
49232444 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacatcaatggaatatgaatcacatctcatttcaatcaaa |
49232543 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
49232544 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaat |
49232643 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
49232644 |
tcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatac |
49232716 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 4 - 273
Target Start/End: Original strand, 25058750 - 25059019
Alignment:
| Q |
4 |
cacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaaaca |
103 |
Q |
| |
|
||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||| |||| |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
25058750 |
cacaattaagtatactcaaatcatgattcactcacaatagcataagttaacaataacaacatcaatggaatatgaattacatctcatttcaatcaaaaca |
25058849 |
T |
 |
| Q |
104 |
tatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattca |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
25058850 |
tatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattca |
25058949 |
T |
 |
| Q |
204 |
agcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
25058950 |
tgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatac |
25059019 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 12902338 - 12902066
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| |||||| |||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
12902338 |
atccacaattaagtatatccaaatcatgattcactcacaatagtatcagttaataataacaacatcaatggaatatgaattacatctcatttcaatcaaa |
12902239 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
12902238 |
acatatcaaatttaatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaat |
12902139 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||| ||||||||| | |||||||||||||||||||||| ||| |||| ||||||||||||||||||||| |
|
|
| T |
12902138 |
tcatgcacaagaaaataacatcacagcaagagcacgaatttagcaaaaattattcatcaacccattttcatac |
12902066 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 4 - 272
Target Start/End: Original strand, 5228324 - 5228591
Alignment:
| Q |
4 |
cacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaaaca |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
5228324 |
cacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataacaacatcaatggaatatgaattacacctcatttcaatcaaaaca |
5228423 |
T |
 |
| Q |
104 |
tatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattca |
203 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
5228424 |
tatcaaatttcatcaattaagtataatctcataacttaacatttatacatattttgaaacatgtaatttcacccacaaacataccataatcatcaattca |
5228523 |
T |
 |
| Q |
204 |
agcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcata |
272 |
Q |
| |
|
||| ||| ||||| | |||||||||||||||||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
5228524 |
tgcacaaggaaataacatcacagcaagagcacgaatttagcaacaa-tgttcatcaacccattttcata |
5228591 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 26 - 273
Target Start/End: Original strand, 22275242 - 22275489
Alignment:
| Q |
26 |
atgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagc |
125 |
Q |
| |
|
|||||||| | |||||| ||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22275242 |
atgattcattcacaataacatcagttaacaataacaacatcaatggaatatgaattacatctcatttcaatcaaaacatatcaaatttcatcaattaagt |
22275341 |
T |
 |
| Q |
126 |
ataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcaca |
225 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||| || ||||| |
|
|
| T |
22275342 |
ataatttcatgacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatggcatcaca |
22275441 |
T |
 |
| Q |
226 |
gcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
22275442 |
gcaagagcacgaatttagcaacaattgttcatcaacccattttcatac |
22275489 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 26 - 273
Target Start/End: Complemental strand, 15468563 - 15468316
Alignment:
| Q |
26 |
atgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagc |
125 |
Q |
| |
|
|||||||| | |||||| ||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15468563 |
atgattcattcacaataacatcagttaacaataacaacatcaatggaatatgaattacatctcatttcaatcaaaacatatcaaatttcatcaattaagt |
15468464 |
T |
 |
| Q |
126 |
ataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcaca |
225 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||| ||| | |
|
|
| T |
15468463 |
ataatttcatgacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcata |
15468364 |
T |
 |
| Q |
226 |
gcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||||||||||||||||| |
|
|
| T |
15468363 |
gcaagagcacgaatttagcaacaattgttcctcaacccattttcatac |
15468316 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 12265041 - 12264768
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||| ||||| |||||||||| |||| |||||| |||| | |||||||||| | ||| |||| ||||||| ||||||||||||||||||||| | | |
|
|
| T |
12265041 |
atccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcatttcaacaaca |
12264942 |
T |
 |
| Q |
101 |
acatatcaaa-tttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaa |
199 |
Q |
| |
|
|||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
12264941 |
acatatcaaaatttcatcaattaagtataatctcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaa |
12264842 |
T |
 |
| Q |
200 |
ttcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|||| ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
12264841 |
ttcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatac |
12264768 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 73 - 273
Target Start/End: Original strand, 18911073 - 18911273
Alignment:
| Q |
73 |
atatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaattt |
172 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18911073 |
atatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaattt |
18911172 |
T |
 |
| Q |
173 |
cacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcata |
272 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
18911173 |
cacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcata |
18911272 |
T |
 |
| Q |
273 |
c |
273 |
Q |
| |
|
| |
|
|
| T |
18911273 |
c |
18911273 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 90 - 273
Target Start/End: Original strand, 12811938 - 12812121
Alignment:
| Q |
90 |
tttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacatacca |
189 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
12811938 |
tttcaatcaaaacatatcaaatttcatcaattaagcataaattcataacttaacatttatacatactttgaaacatgtaattccacccataaacatacca |
12812037 |
T |
 |
| Q |
190 |
taatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
12812038 |
taatcatcaattcaagcacaagaaaatagcattacagcaagagcacgaatttaacaacaattgtccatcaacccattttcatac |
12812121 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 44228993 - 44229265
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||| ||||| |||||||||| |||| |||||| |||| | |||||||||| | || || ||||||||| |||||||||||||||||| || | | |
|
|
| T |
44228993 |
atccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataaccttaatggaacatgaatcacatctcattttaacaaca |
44229092 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||| |||| |||| || ||||||||||| ||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
44229093 |
acatatcaagattcactaattgagtataatttcatagcttgacatttatacatactttgaaacatgtaatttcatccacaaacataccataatcatcaat |
44229192 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||| ||||||||||| ||||| |||||||||| |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
44229193 |
tcatgcacaagaaaatagcatcacaacaagagcacggatttaacatcaattgttcatcaacccattttcatac |
44229265 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 67 - 273
Target Start/End: Original strand, 54651531 - 54651737
Alignment:
| Q |
67 |
aatggaatatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatg |
166 |
Q |
| |
|
||||||| |||||| |||||||||||||| | ||||||||||| |||| ||||| || |||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
54651531 |
aatggaacatgaattacatctcatttcaacaacaacatatcaaaattcaccaattgagtataatttcataacttaacatttatacatactttgcaacatg |
54651630 |
T |
 |
| Q |
167 |
taatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccatt |
266 |
Q |
| |
|
|||||||| || || ||||| || |||||||||||| ||| ||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
54651631 |
caatttcactcacaatcatacaattatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattattcatcaacccatt |
54651730 |
T |
 |
| Q |
267 |
ttcatac |
273 |
Q |
| |
|
||||||| |
|
|
| T |
54651731 |
ttcatac |
54651737 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 18897247 - 18897133
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
18897247 |
atccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataacaacatcaatggaatatgaattacatctcatttcaatcaaa |
18897148 |
T |
 |
| Q |
101 |
acatatcaaatttca |
115 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
18897147 |
acatatcaaatttca |
18897133 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 163 - 273
Target Start/End: Complemental strand, 18897130 - 18897020
Alignment:
| Q |
163 |
catgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacc |
262 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
18897130 |
catgtaattccacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttatcaacaattgttcatcaacc |
18897031 |
T |
 |
| Q |
263 |
cattttcatac |
273 |
Q |
| |
|
||||||||||| |
|
|
| T |
18897030 |
cattttcatac |
18897020 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 251
Target Start/End: Complemental strand, 11986408 - 11986172
Alignment:
| Q |
15 |
atacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaaacatatcaaatttc |
114 |
Q |
| |
|
|||||||| ||||||||||| |||| | |||||||||| | | | |||| ||||||| ||||||||||| || |||||| | ||| || |||| ||| |
|
|
| T |
11986408 |
atacccaagtcatgattcacccacaacaacatcagttaatagcatcaacatcaatggaacatgaatcacatatcttttcaacaacaacttagcaaaattc |
11986309 |
T |
 |
| Q |
115 |
atcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaa |
214 |
Q |
| |
|
| | || |||| ||||||||||||| ||||| ||||||||||| ||||||||||||||| ||| || ||||| || ||||| || ||| ||| | |||| |
|
|
| T |
11986308 |
actatttgagcacaatttcataacttgacattaatacatactttaaaacatgtaatttcaaccacaatcatacaattatcattaaatcatgcacacgaaa |
11986209 |
T |
 |
| Q |
215 |
atagcttcacagcaagagcacgaatttaacaacaatt |
251 |
Q |
| |
|
||| | |||||| ||||||||||||||||||||||| |
|
|
| T |
11986208 |
ataacatcacagttagagcacgaatttaacaacaatt |
11986172 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 132 - 273
Target Start/End: Original strand, 16821280 - 16821419
Alignment:
| Q |
132 |
tcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaaga |
231 |
Q |
| |
|
||||| |||||||||| |||||| |||||| |||||||||||||| | || ||||| || |||||||||| | ||||| || ||| | ||||||||||| |
|
|
| T |
16821280 |
tcatagcttaacatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacataacatcacagcaaga |
16821377 |
T |
 |
| Q |
232 |
gcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||| |||| ||| |||||||||||||||||||||||||| |
|
|
| T |
16821378 |
gcacggatttgacataaattgttcatcaacccattttcatac |
16821419 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 161 - 273
Target Start/End: Original strand, 55316387 - 55316499
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaa |
260 |
Q |
| |
|
|||||||||||||||| | || ||||| | | |||||||||| ||||| || ||| | |||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
55316387 |
aacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaa |
55316486 |
T |
 |
| Q |
261 |
cccattttcatac |
273 |
Q |
| |
|
||||||||||||| |
|
|
| T |
55316487 |
cccattttcatac |
55316499 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 104 - 273
Target Start/End: Complemental strand, 15936779 - 15936611
Alignment:
| Q |
104 |
tatcaaatttcatcaattaagcataattt-cataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattc |
202 |
Q |
| |
|
||||||| |||| ||||| |||| ||||| || |||||| ||||| |||| | |||||| |||||||||||||| | || ||||| || ||||||||||| |
|
|
| T |
15936779 |
tatcaaaattcaccaattgagcacaattttcacaacttatcatttttacaca-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattc |
15936682 |
T |
 |
| Q |
203 |
aagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
| ||||| || ||| | | |||| ||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
15936681 |
atgcatacaaacatatcattacagttggagcacgaatttagtaacaattgttcatcaacccattttcatac |
15936611 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 273
Target Start/End: Original strand, 41270243 - 41270355
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaa |
260 |
Q |
| |
|
||||||||||| |||| | || ||||| | | |||||||||| ||||| || ||| | |||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
41270243 |
aacatgtaattccaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaa |
41270342 |
T |
 |
| Q |
261 |
cccattttcatac |
273 |
Q |
| |
|
||||||||||||| |
|
|
| T |
41270343 |
cccattttcatac |
41270355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 273
Target Start/End: Original strand, 15614973 - 15615113
Alignment:
| Q |
131 |
ttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaag |
230 |
Q |
| |
|
|||| |||||| ||||| |||||| |||||| |||||||||||||| | || | ||| || |||||||||||| ||||| || ||| | ||||| ||| |
|
|
| T |
15614973 |
ttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcctacaattatcatcaattcatgcatacaaatataacaccacagtaag |
15615070 |
T |
 |
| Q |
231 |
agcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||| ||| || || |||||||||||||||||||||||||| |
|
|
| T |
15615071 |
agcacaaatctagcatgaattgttcatcaacccattttcatac |
15615113 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 273
Target Start/End: Complemental strand, 15938621 - 15938453
Alignment:
| Q |
104 |
tatcaaatttcatcaattaagcataattt-cataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattc |
202 |
Q |
| |
|
||||||| |||| ||||| |||| ||||| || |||||| ||||| |||| | |||||| |||||||||||||| | || ||||| || ||||||||||| |
|
|
| T |
15938621 |
tatcaaaattcaccaattgagcacaattttcacaacttatcatttttacaca-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattc |
15938524 |
T |
 |
| Q |
203 |
aagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
| | || || ||| | | |||| ||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
15938523 |
atgattacaaacatatcattacagttggagcacgtatttagtaacaattgttcatcaacccattttcatac |
15938453 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 51158143 - 51158024
Alignment:
| Q |
130 |
tttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaa |
229 |
Q |
| |
|
||||| |||||| ||||| |||||| |||||| |||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | |||||| |
|
|
| T |
51158143 |
tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttg |
51158046 |
T |
 |
| Q |
230 |
gagcacgaatttaacaacaatt |
251 |
Q |
| |
|
||||||||||||| |||||||| |
|
|
| T |
51158045 |
gagcacgaatttagcaacaatt |
51158024 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 209
Target Start/End: Complemental strand, 17912662 - 17912530
Alignment:
| Q |
75 |
atgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataattt-cataacttaacatttatacatactttgaaacatgtaatttc |
173 |
Q |
| |
|
|||||||| | |||| ||||| | ||||||||||||| |||||||| ||| ||||| |||||||| ||||| |||||| || |||||||||||||| |
|
|
| T |
17912662 |
atgaatcatagctcaattcaactacaacatatcaaatt-catcaattttgcacaattttcataacttttcatttttacatattt--aaacatgtaatttc |
17912566 |
T |
 |
| Q |
174 |
acccataaacataccataatcatcaattcaagcata |
209 |
Q |
| |
|
||| | || ||||| || |||||||||||| ||||| |
|
|
| T |
17912565 |
accaacaatcatacaattatcatcaattcatgcata |
17912530 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 251
Target Start/End: Complemental strand, 15859120 - 15859030
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaatt |
251 |
Q |
| |
|
|||||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | |||||| ||||||||||||| |||||||| |
|
|
| T |
15859120 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaatt |
15859030 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 257
Target Start/End: Original strand, 13839061 - 13839157
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcat |
257 |
Q |
| |
|
|||||||||||||||| || ||||| || |||||||||||| ||||| || ||| | |||||| ||||||||||||| |||||||| ||||| |
|
|
| T |
13839061 |
aacatgtaatttcaccatcaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattattcat |
13839157 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 253; Significance: 1e-141; HSPs: 22)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 11231586 - 11231314
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
11231586 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
11231487 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11231486 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
11231387 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
11231386 |
tcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatac |
11231314 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 22513433 - 22513161
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
22513433 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
22513334 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22513333 |
gcatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
22513234 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
22513233 |
tcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatac |
22513161 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 28776055 - 28775783
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
28776055 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
28775956 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28775955 |
gcatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
28775856 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
28775855 |
tcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatac |
28775783 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 24686029 - 24685757
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
24686029 |
atccacaattaagtatacctaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
24685930 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24685929 |
acacatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
24685830 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
24685829 |
tcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatac |
24685757 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 12728400 - 12728672
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |
|
|
| T |
12728400 |
atccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataaccacatcaatggaatatgaatcacatctcatttcaataaaa |
12728499 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
12728500 |
acatatcaaatttcatcaattaagaataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaat |
12728599 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
12728600 |
tcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatac |
12728672 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 34824483 - 34824755
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |
|
|
| T |
34824483 |
atccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataaccacatcaatggaatatgaatcacatctcatttcaataaaa |
34824582 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
34824583 |
acatatcaaatttcatcaattaagaataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaat |
34824682 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
34824683 |
tcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatac |
34824755 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 16935601 - 16935873
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
16935601 |
atccacaattaagtatacccaaatcatgattcactcacaatagcatcatttaacaataaccacatcaatggaatatgaatcacatctcatttcaatcaaa |
16935700 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
16935701 |
acatatcaaatttcatcaataaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacgcacaaacataccataatcatcaat |
16935800 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16935801 |
tcatgcacaagaaaatagcatcacagcaagagcatgaatttaacaacaattgttcatcaacccattttcatac |
16935873 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 17006261 - 17006533
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
17006261 |
atccacaattaagtatacccaaatcatgattcactcacaatagcatcatttaacaataaccacatcaatggaatatgaatcacatctcatttcaatcaaa |
17006360 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
17006361 |
acatatcaaatttcatcaataaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacgcacaaacataccataatcatcaat |
17006460 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17006461 |
tcatgcacaagaaaatagcatcacagcaagagcatgaatttaacaacaattgttcatcaacccattttcatac |
17006533 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 23778293 - 23778021
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
23778293 |
atccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataacaacatcaatggaatatgaattacatctcatttcaatcaaa |
23778194 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
23778193 |
tcatatcaaatttcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcatccacaaacataccataatcatcaat |
23778094 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
23778093 |
tcatgcataagaaaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatac |
23778021 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 73 - 273
Target Start/End: Original strand, 8943926 - 8944126
Alignment:
| Q |
73 |
atatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaattt |
172 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8943926 |
atatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaattt |
8944025 |
T |
 |
| Q |
173 |
cacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcata |
272 |
Q |
| |
|
|||||| ||| |||||||||||||||||||| ||| ||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
8944026 |
cacccacaaatataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcata |
8944125 |
T |
 |
| Q |
273 |
c |
273 |
Q |
| |
|
| |
|
|
| T |
8944126 |
c |
8944126 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 73 - 273
Target Start/End: Complemental strand, 12636044 - 12635844
Alignment:
| Q |
73 |
atatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaattt |
172 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12636044 |
atatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaattt |
12635945 |
T |
 |
| Q |
173 |
cacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcata |
272 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
12635944 |
cacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacctattttcata |
12635845 |
T |
 |
| Q |
273 |
c |
273 |
Q |
| |
|
| |
|
|
| T |
12635844 |
c |
12635844 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 73 - 273
Target Start/End: Complemental strand, 42178145 - 42177945
Alignment:
| Q |
73 |
atatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaattt |
172 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42178145 |
atatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaattt |
42178046 |
T |
 |
| Q |
173 |
cacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcata |
272 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||| ||||||||||| | ||| |||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
42178045 |
cacccaaaaacataccataatcatcaattcatgcacaagaaaatagcattacaacaagagcacgaatttagcaacaattgttcatcaacccattttcata |
42177946 |
T |
 |
| Q |
273 |
c |
273 |
Q |
| |
|
| |
|
|
| T |
42177945 |
c |
42177945 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 73 - 273
Target Start/End: Complemental strand, 3798779 - 3798579
Alignment:
| Q |
73 |
atatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaattt |
172 |
Q |
| |
|
|||||| | |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3798779 |
atatgatttacatctcatttcaaccaaaacatatcaaatttcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaattt |
3798680 |
T |
 |
| Q |
173 |
cacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcata |
272 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||| ||||||||| | | ||| |||||||||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
3798679 |
cacccacaaacataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcata |
3798580 |
T |
 |
| Q |
273 |
c |
273 |
Q |
| |
|
| |
|
|
| T |
3798579 |
c |
3798579 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 73 - 273
Target Start/End: Complemental strand, 12641818 - 12641618
Alignment:
| Q |
73 |
atatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaattt |
172 |
Q |
| |
|
|||||| | |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12641818 |
atatgatttacatctcatttcaaccaaaacatatcaaatttcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaattt |
12641719 |
T |
 |
| Q |
173 |
cacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcata |
272 |
Q |
| |
|
|| ||| |||||||||||||||||||||||| ||| ||||||||| | | ||| |||||||||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
12641718 |
cagccacaaacataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcata |
12641619 |
T |
 |
| Q |
273 |
c |
273 |
Q |
| |
|
| |
|
|
| T |
12641618 |
c |
12641618 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 21141903 - 21142175
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||| ||||| |||||||||| || | |||||| |||| | |||||||||| | || || ||||||||| |||||||||||||||||| || | | |
|
|
| T |
21141903 |
atccataattatgtatacccaagtcgtaattcacccacaacaacatcagttaatagcaataaccttaatggaacatgaatcacatctcattttaacaaca |
21142002 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||| |||| |||| || ||||||||||| ||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||| |
|
|
| T |
21142003 |
acatatcaagattcactaattgagtataatttcatagcttgacatttatacatactttgaaacatgtaatttcatccacaaacataccataatcctcaat |
21142102 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||| ||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
21142103 |
tcatgcacaagaaaatagcatcacaacaagagcacgaatttaacatcaattgttcatcaacccattttcatac |
21142175 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 113 - 273
Target Start/End: Original strand, 23774257 - 23774416
Alignment:
| Q |
113 |
tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataaga |
212 |
Q |
| |
|
|||| ||||| ||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
23774257 |
tcattaattaggcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcaagtataaga |
23774356 |
T |
 |
| Q |
213 |
aaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|| ||| || | ||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
23774357 |
aac-agcaacataacaagagcacgaatttgacatgaattgttcatcaacccattttcatac |
23774416 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 113 - 273
Target Start/End: Complemental strand, 5888765 - 5888606
Alignment:
| Q |
113 |
tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataaga |
212 |
Q |
| |
|
|||| ||||| ||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | ||||| |
|
|
| T |
5888765 |
tcattaattaggcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- |
5888667 |
T |
 |
| Q |
213 |
aaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|| ||| || | ||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
5888666 |
caacagcaacataacaagagcacgaatttgacatgaattgttcatcaacccattttcatac |
5888606 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 130 - 257
Target Start/End: Complemental strand, 7507969 - 7507844
Alignment:
| Q |
130 |
tttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaa |
229 |
Q |
| |
|
|||||||||||| |||| |||||| |||||| |||||||||||||| | || ||||| || |||||||||||| ||| ||||||||||| ||||| ||| |
|
|
| T |
7507969 |
tttcataacttattatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgcacaagaaaatagcatcacaacaa |
7507872 |
T |
 |
| Q |
230 |
gagcacgaatttaacaacaattgttcat |
257 |
Q |
| |
|
||||||||||||| ||| |||| ||||| |
|
|
| T |
7507871 |
gagcacgaatttagcaataattattcat |
7507844 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 273
Target Start/End: Complemental strand, 19886745 - 19886633
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaa |
260 |
Q |
| |
|
|||||||||||||||| | || |||| | | |||||||||| ||||| || ||| | |||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
19886745 |
aacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaa |
19886646 |
T |
 |
| Q |
261 |
cccattttcatac |
273 |
Q |
| |
|
||||||||||||| |
|
|
| T |
19886645 |
cccattttcatac |
19886633 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 251
Target Start/End: Complemental strand, 25265546 - 25265396
Alignment:
| Q |
100 |
aacatatcaaatttcatcaattaagcataattt-cataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatca |
198 |
Q |
| |
|
|||||| |||| |||| ||||| |||| ||||| || ||||| |||||| |||||| || |||||||||||||||| | || ||||| || ||||||| |
|
|
| T |
25265546 |
aacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattg--aacatgtaatttcaccaacaatcatacaattatcatca |
25265449 |
T |
 |
| Q |
199 |
attcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaatt |
251 |
Q |
| |
|
||||| ||||| || ||| | ||| || |||||||||||||| |||||||| |
|
|
| T |
25265448 |
attcatgcatacaaacataacatcaaagttagagcacgaatttagcaacaatt |
25265396 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 462876 - 462995
Alignment:
| Q |
130 |
tttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaa |
229 |
Q |
| |
|
||||| |||||| ||||| |||||| |||||| |||||||||||||| | || | ||| || |||||||||||| ||||| || ||| | |||||| |
|
|
| T |
462876 |
tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcacagttg |
462973 |
T |
 |
| Q |
230 |
gagcacgaatttaacaacaatt |
251 |
Q |
| |
|
||||||||||||| |||||||| |
|
|
| T |
462974 |
gagcacgaatttagcaacaatt |
462995 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 251
Target Start/End: Complemental strand, 20627408 - 20627319
Alignment:
| Q |
162 |
acatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaatt |
251 |
Q |
| |
|
||||||||||||||| | || ||||| || ||||||||||| ||||| || ||| | |||||| |||||||||||||||||||||| |
|
|
| T |
20627408 |
acatgtaatttcaccaacaatcatacaattatcatcaattcgtgcatacaaacatatcatcacagttggagcacgaatttaacaacaatt |
20627319 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0107 (Bit Score: 249; Significance: 1e-138; HSPs: 2)
Name: scaffold0107
Description:
Target: scaffold0107; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 31317 - 31589
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
31317 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
31416 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31417 |
gcatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
31516 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
31517 |
tcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatac |
31589 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0107; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 39654 - 39926
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||| ||||||||| |||||||||||||| ||| |
|
|
| T |
39654 |
atccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataacaacatcaatgaaatatgaataacatctcatttcaaaaaaa |
39753 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
39754 |
acatatcaaatttcatcaattaagaataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaaaataccataatcatcaat |
39853 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||| | |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
39854 |
tcatgcacaggaaaatagaatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatac |
39926 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0076 (Bit Score: 249; Significance: 1e-138; HSPs: 2)
Name: scaffold0076
Description:
Target: scaffold0076; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 39111 - 39383
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
39111 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
39210 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39211 |
gcatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
39310 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
39311 |
tcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatac |
39383 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0076; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 131 - 273
Target Start/End: Original strand, 43137 - 43277
Alignment:
| Q |
131 |
ttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaag |
230 |
Q |
| |
|
||||||||||||||||| |||||| |||||| |||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | || ||||||| |
|
|
| T |
43137 |
ttcataacttaacatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgcatagaaacataacatcccagcaag |
43234 |
T |
 |
| Q |
231 |
agcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||||||| ||| ||||| |||||||||||||||||||| |
|
|
| T |
43235 |
agcacgaatttgacatgaattgctcatcaacccattttcatac |
43277 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 249; Significance: 1e-138; HSPs: 18)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 271608 - 271336
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
271608 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
271509 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
271508 |
gcatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
271409 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
271408 |
tcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatac |
271336 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 644312 - 644584
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
644312 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
644411 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
644412 |
gcatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
644511 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
644512 |
tcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatac |
644584 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 830047 - 830319
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
830047 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
830146 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
830147 |
gcatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
830246 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
830247 |
tcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatac |
830319 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 22089042 - 22088770
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
22089042 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
22088943 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
22088942 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacctataaacataccataatcatcaat |
22088843 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
22088842 |
tcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacacattttcatac |
22088770 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 2 - 273
Target Start/End: Complemental strand, 22006505 - 22006234
Alignment:
| Q |
2 |
tccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaaa |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
22006505 |
tccacaattaagtatacccaaatcatgattcactcacaataacatcagttaacaataaccacatcaatggaatatgaatcacatctcatttcaatcaaaa |
22006406 |
T |
 |
| Q |
102 |
catatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaatt |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
22006405 |
catatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaatt |
22006306 |
T |
 |
| Q |
202 |
caagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|| ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
22006305 |
catgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatac |
22006234 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 15319407 - 15319135
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
15319407 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaacatgaatcacatctcttttcaatcaaa |
15319308 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15319307 |
acatatcaaatttcatcaattaagcataatttcataactcaacatttatacatacttagaaacatgtaatttcacccataaacataccataatcatcaat |
15319208 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
15319207 |
tcaagcacaagaaaatagtatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatac |
15319135 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 15499776 - 15499504
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
15499776 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaacatgaatcacatctcttttcaatcaaa |
15499677 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15499676 |
acatatcaaatttcatcaattaagcataatttcataactcaacatttatacatacttagaaacatgtaatttcacccataaacataccataatcatcaat |
15499577 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
15499576 |
tcaagcacaagaaaatagtatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatac |
15499504 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 13662513 - 13662241
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
13662513 |
atccataattatgtatacccaaatcatgattcactcacaatagcatcagttaacaataaccacatcaatggaatatgaatcacatctcatttcaatcaaa |
13662414 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |
|
|
| T |
13662413 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatncat |
13662314 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||| ||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
13662313 |
tcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgtttatcaacccattttcatac |
13662241 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 73 - 273
Target Start/End: Complemental strand, 13721104 - 13720904
Alignment:
| Q |
73 |
atatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaattt |
172 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13721104 |
atatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaattt |
13721005 |
T |
 |
| Q |
173 |
cacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcata |
272 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
13721004 |
cacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcata |
13720905 |
T |
 |
| Q |
273 |
c |
273 |
Q |
| |
|
| |
|
|
| T |
13720904 |
c |
13720904 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 73 - 273
Target Start/End: Complemental strand, 16873227 - 16873027
Alignment:
| Q |
73 |
atatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaattt |
172 |
Q |
| |
|
|||||| | |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16873227 |
atatgatttacatctcatttcaaccaaaacatatcaaatttcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaattt |
16873128 |
T |
 |
| Q |
173 |
cacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcata |
272 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||| ||||||||| | | ||| |||||||||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
16873127 |
cacccacaaacataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcata |
16873028 |
T |
 |
| Q |
273 |
c |
273 |
Q |
| |
|
| |
|
|
| T |
16873027 |
c |
16873027 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 44 - 273
Target Start/End: Original strand, 16195281 - 16195511
Alignment:
| Q |
44 |
catcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaaacatatcaaa-tttcatcaattaagcataatttcataacttaa |
142 |
Q |
| |
|
|||||||||| | ||| |||| ||||||| ||||||||||||||||||||| | ||||||||||| |||||| ||||||| ||||| ||||||||||| |
|
|
| T |
16195281 |
catcagttaatagcaacaacatcaatggaacatgaatcacatctcatttcaacaacaacatatcaaaatttcataaattaagtataatctcataacttaa |
16195380 |
T |
 |
| Q |
143 |
catttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaattta |
242 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||| ||||| |||||||| ||| ||||||||| |
|
|
| T |
16195381 |
catttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaacatagcatcacagcacgagaacgaattta |
16195480 |
T |
 |
| Q |
243 |
acaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
16195481 |
gcaacaattgttcatcaacccattttcatac |
16195511 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 273
Target Start/End: Complemental strand, 21844684 - 21844544
Alignment:
| Q |
131 |
ttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaag |
230 |
Q |
| |
|
||||||||||| ||||| |||||| || ||||||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | |||||||||| |
|
|
| T |
21844684 |
ttcataacttatcatttttacatattt--aaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcacagcaag |
21844587 |
T |
 |
| Q |
231 |
agcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||||||| ||| ||||||||||||||||| |||||||| |
|
|
| T |
21844586 |
agcacgaatttgacatgaattgttcatcaacccaatttcatac |
21844544 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 131 - 273
Target Start/End: Complemental strand, 21852077 - 21851937
Alignment:
| Q |
131 |
ttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaag |
230 |
Q |
| |
|
||||||||||| ||||| |||||| || |||||| |||||||||| | || ||||| || |||||||||||| ||||| || ||| | |||||||||| |
|
|
| T |
21852077 |
ttcataacttatcatttttacatattt--aaacatttaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcacagcaag |
21851980 |
T |
 |
| Q |
231 |
agcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||||||| ||| ||||||||||||||||| |||||||| |
|
|
| T |
21851979 |
agcacgaatttgacatgaattgttcatcaacccaatttcatac |
21851937 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 130 - 273
Target Start/End: Original strand, 24549120 - 24549261
Alignment:
| Q |
130 |
tttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaa |
229 |
Q |
| |
|
||||| |||||| ||||| |||||| |||||| |||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | |||||| || |
|
|
| T |
24549120 |
tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaa |
24549217 |
T |
 |
| Q |
230 |
gagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|||||||||| || || |||||||||||||||||||||||||| |
|
|
| T |
24549218 |
gagcacgaatctagcatgaattgttcatcaacccattttcatac |
24549261 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 130 - 272
Target Start/End: Complemental strand, 6774371 - 6774231
Alignment:
| Q |
130 |
tttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaa |
229 |
Q |
| |
|
||||| |||||| ||||| |||||| |||||| |||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | |||||| || |
|
|
| T |
6774371 |
tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaa |
6774274 |
T |
 |
| Q |
230 |
gagcacgaatttaacaacaattgttcatcaacccattttcata |
272 |
Q |
| |
|
|||||||||| || || ||||||||||||||||||||||||| |
|
|
| T |
6774273 |
gagcacgaatctagcatgaattgttcatcaacccattttcata |
6774231 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 273
Target Start/End: Complemental strand, 16674524 - 16674364
Alignment:
| Q |
112 |
ttcatcaattaagcataat-ttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataa |
210 |
Q |
| |
|
|||| |||||||||| ||| ||||||||||| ||||| | |||| | |||| |||||||||||||| | || ||||| | | ||| |||||| |||||| |
|
|
| T |
16674524 |
ttcaccaattaagcacaatattcataacttatcatttttgcata-tatgaa-catgtaatttcaccaacaatcatacaactaacataaattcatgcataa |
16674427 |
T |
 |
| Q |
211 |
gaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|| ||| | |||||| ||||||||||||||| || ||||||||| |||||||||||||||| |
|
|
| T |
16674426 |
aaacataacatcacagaaagagcacgaatttagcatgaattgttcaacaacccattttcatac |
16674364 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 273
Target Start/End: Original strand, 30120890 - 30121002
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaa |
260 |
Q |
| |
|
|||||||||||||||| | || ||||| | | ||| |||||| ||||| || ||| | |||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
30120890 |
aacatgtaatttcaccaacaatcatacaactaacataaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaa |
30120989 |
T |
 |
| Q |
261 |
cccattttcatac |
273 |
Q |
| |
|
| ||||||||||| |
|
|
| T |
30120990 |
ctcattttcatac |
30121002 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 251
Target Start/End: Original strand, 17345690 - 17345826
Alignment:
| Q |
114 |
catcaattaagcataattt-cataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataaga |
212 |
Q |
| |
|
|||||||| |||| ||||| |||||||| |||||| |||||| || ||||||| |||||||| | || ||||| || |||||||||||| ||||| | |
|
|
| T |
17345690 |
catcaattgagcacaattttcataacttcacatttttacataattg--aacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatataa |
17345787 |
T |
 |
| Q |
213 |
aaatagcttcacagcaagagcacgaatttaacaacaatt |
251 |
Q |
| |
|
| ||| | |||||| ||||||||||||| |||||||| |
|
|
| T |
17345788 |
acataacatcacagttagagcacgaatttcgcaacaatt |
17345826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 249; Significance: 1e-138; HSPs: 23)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 7822736 - 7823008
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
7822736 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
7822835 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7822836 |
gcatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
7822935 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
7822936 |
tcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatac |
7823008 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 7830047 - 7830319
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
7830047 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
7830146 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7830147 |
gcatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
7830246 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
7830247 |
tcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatac |
7830319 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 27101885 - 27101613
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
27101885 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
27101786 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27101785 |
gcatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
27101686 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
27101685 |
tcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatac |
27101613 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 27109233 - 27108961
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
27109233 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
27109134 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27109133 |
gcatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
27109034 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
27109033 |
tcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatac |
27108961 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 27176441 - 27176713
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
27176441 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
27176540 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27176541 |
gcatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
27176640 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
27176641 |
tcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatac |
27176713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 38783977 - 38783705
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
38783977 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
38783878 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38783877 |
gcatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
38783778 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
38783777 |
tcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatac |
38783705 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 15951039 - 15950767
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
15951039 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataatcacatcaatggaatatgaatcacatctcatttcaatcaaa |
15950940 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
15950939 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaat |
15950840 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
15950839 |
tcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatac |
15950767 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 15760362 - 15760090
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||||| |||||| ||||||||||||||||| |||| |||||||||||||| ||||||||||||||| ||| |
|
|
| T |
15760362 |
atccacaattaagtatacccaattcattattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattacatctcatttcaattaaa |
15760263 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
15760262 |
acatatcaaatttcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacatatcataatcatcaat |
15760163 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||| ||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
15760162 |
tcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaataattgttcatcaacccattttcatac |
15760090 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 73 - 273
Target Start/End: Complemental strand, 18980197 - 18979997
Alignment:
| Q |
73 |
atatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaattt |
172 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18980197 |
atatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaattt |
18980098 |
T |
 |
| Q |
173 |
cacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcata |
272 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
18980097 |
cacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcata |
18979998 |
T |
 |
| Q |
273 |
c |
273 |
Q |
| |
|
| |
|
|
| T |
18979997 |
c |
18979997 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 73 - 273
Target Start/End: Complemental strand, 14251074 - 14250874
Alignment:
| Q |
73 |
atatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaattt |
172 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14251074 |
atatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaattt |
14250975 |
T |
 |
| Q |
173 |
cacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcata |
272 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||| ||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14250974 |
cacccaaaaacataccataatcatcaattcatgcacaagaaaatagcattacaacaagagcacgaatttaacaacaattgttcatcaacccattttcata |
14250875 |
T |
 |
| Q |
273 |
c |
273 |
Q |
| |
|
| |
|
|
| T |
14250874 |
c |
14250874 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 73 - 273
Target Start/End: Original strand, 15927648 - 15927848
Alignment:
| Q |
73 |
atatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaattt |
172 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15927648 |
atatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaattt |
15927747 |
T |
 |
| Q |
173 |
cacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcata |
272 |
Q |
| |
|
|||||| || ||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||||||||| ||||||||| ||||||| ||||||||||| |
|
|
| T |
15927748 |
cacccacaagcataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgatcatcaatccattttcata |
15927847 |
T |
 |
| Q |
273 |
c |
273 |
Q |
| |
|
| |
|
|
| T |
15927848 |
c |
15927848 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 73 - 273
Target Start/End: Original strand, 13758450 - 13758650
Alignment:
| Q |
73 |
atatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaattt |
172 |
Q |
| |
|
|||||| | |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13758450 |
atatgatttacatctcatttcaaccaaaacatatcaaatttcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaattt |
13758549 |
T |
 |
| Q |
173 |
cacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcata |
272 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||| ||||||||| | | ||| |||||||||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
13758550 |
cacccacaaacataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcata |
13758649 |
T |
 |
| Q |
273 |
c |
273 |
Q |
| |
|
| |
|
|
| T |
13758650 |
c |
13758650 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 126 - 269
Target Start/End: Complemental strand, 48622788 - 48622646
Alignment:
| Q |
126 |
ataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcaca |
225 |
Q |
| |
|
||||||||| ||||||||| |||| ||| ||||||| |||||||||||||||| |||||||||||||||||||||||| ||| ||||||||| | ||||| |
|
|
| T |
48622788 |
ataatttcacaacttaacaattatgcatgctttgaa-catgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatatcatcaca |
48622690 |
T |
 |
| Q |
226 |
gcaagagcacgaatttaacaacaattgttcatcaacccattttc |
269 |
Q |
| |
|
| ||||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
48622689 |
gtaagagcacgaatttagcatcaattgttcatcaacccattttc |
48622646 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 113 - 273
Target Start/End: Complemental strand, 10000505 - 10000346
Alignment:
| Q |
113 |
tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataaga |
212 |
Q |
| |
|
|||||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | ||||| |
|
|
| T |
10000505 |
tcatcaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- |
10000407 |
T |
 |
| Q |
213 |
aaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| | | || | ||||||||||||||| ||| ||||||||||||||||||||| |||| |
|
|
| T |
10000406 |
aaacaacaacataacaagagcacgaatttgacataaattgttcatcaacccatttttatac |
10000346 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 13321038 - 13321273
Alignment:
| Q |
17 |
acccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaa--aacatatcaaatttc |
114 |
Q |
| |
|
|||||| |||||||||| |||| | ||||| ||||||| || |||| ||| ||| |||||||| |||||| ||||| ||| ||| || |||| ||| |
|
|
| T |
13321038 |
acccaagtcatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaattcaa-caatcaacttagcaaaattc |
13321136 |
T |
 |
| Q |
115 |
atcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaa |
214 |
Q |
| |
|
| ||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||| | || ||||| || |||||||||||| ||||| || |
|
|
| T |
13321137 |
accaattgagcacaatttcataacttgacatttatacatactttgaaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaac |
13321236 |
T |
 |
| Q |
215 |
atagcttcacagcaagagcacgaatttaacaacaatt |
251 |
Q |
| |
|
||| | |||||| |||||||||||||| |||||||| |
|
|
| T |
13321237 |
ataacatcacagttagagcacgaatttagcaacaatt |
13321273 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 113 - 273
Target Start/End: Original strand, 16418618 - 16418777
Alignment:
| Q |
113 |
tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataaga |
212 |
Q |
| |
|
|||| ||||| ||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | ||||| |
|
|
| T |
16418618 |
tcattaattaggcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- |
16418716 |
T |
 |
| Q |
213 |
aaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|| ||| || | ||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
16418717 |
caacagcaacataacaagagcacgaatttgacatgaattgttcatcaacccattttcatac |
16418777 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 273
Target Start/End: Original strand, 13572816 - 13572956
Alignment:
| Q |
131 |
ttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaag |
230 |
Q |
| |
|
||||||||||| ||||| |||||| || ||||||||||||||||| | || || || || |||||||||||| ||||| || ||| | |||||||||| |
|
|
| T |
13572816 |
ttcataacttatcatttttacatattt--aaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcatacaaacataacatcacagcaag |
13572913 |
T |
 |
| Q |
231 |
agcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
13572914 |
agcacgaatttgacatgaattgttcatcaacccattttcatac |
13572956 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 130 - 273
Target Start/End: Complemental strand, 16479075 - 16478934
Alignment:
| Q |
130 |
tttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaa |
229 |
Q |
| |
|
||||| |||||| ||||| |||||| |||||| |||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | || ||| || |
|
|
| T |
16479075 |
tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcgcagtaa |
16478978 |
T |
 |
| Q |
230 |
gagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
16478977 |
gagcacgaatctaacatgaattgttcatcaacccattttcatac |
16478934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 112 - 273
Target Start/End: Complemental strand, 13911156 - 13910996
Alignment:
| Q |
112 |
ttcatcaattaagcataat-ttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataa |
210 |
Q |
| |
|
|||| ||||| |||||||| ||||||||||| ||||| | |||| | |||| |||||||||||||| | || ||||| || | |||||||||| ||||| |
|
|
| T |
13911156 |
ttcaccaattgagcataatattcataacttatcatttttgcata-tatgaa-catgtaatttcaccaacaatcatacaattaacatcaattcatgcatac |
13911059 |
T |
 |
| Q |
211 |
gaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|| ||| | ||||| |||||||||||||||| || |||||||||||||| ||||||||||| |
|
|
| T |
13911058 |
aaacataacatcacaacaagagcacgaatttagcatgaattgttcatcaactcattttcatac |
13910996 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 273
Target Start/End: Original strand, 10989577 - 10989689
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaa |
260 |
Q |
| |
|
|||||||||||||||| | || ||||| | | |||||||||| ||||| || ||| | |||||||||||||||||||||| || | ||||||||||| |
|
|
| T |
10989577 |
aacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgatttgttcatcaa |
10989676 |
T |
 |
| Q |
261 |
cccattttcatac |
273 |
Q |
| |
|
||||||||||||| |
|
|
| T |
10989677 |
cccattttcatac |
10989689 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 273
Target Start/End: Complemental strand, 18253931 - 18253819
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaa |
260 |
Q |
| |
|
|||||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | | |||| ||||||||||||| |||||||||||||||| |
|
|
| T |
18253931 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaattgttcatcaa |
18253832 |
T |
 |
| Q |
261 |
cccattttcatac |
273 |
Q |
| |
|
||||||||||||| |
|
|
| T |
18253831 |
cccattttcatac |
18253819 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 273
Target Start/End: Original strand, 2437625 - 2437737
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaa |
260 |
Q |
| |
|
|||||||||||||||| | || ||||| | | |||||||||| ||||| || ||| | ||||| |||||||||||||||| ||| |||||||||| | |
|
|
| T |
2437625 |
aacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagcaagaattgttcattat |
2437724 |
T |
 |
| Q |
261 |
cccattttcatac |
273 |
Q |
| |
|
||||||||||||| |
|
|
| T |
2437725 |
cccattttcatac |
2437737 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 47481156 - 47481037
Alignment:
| Q |
130 |
tttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaa |
229 |
Q |
| |
|
||||| |||||| ||||| |||||| |||||| ||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | |||||| | |
|
|
| T |
47481156 |
tttcacaacttatcatttttacata-tttgaa-catgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtta |
47481059 |
T |
 |
| Q |
230 |
gagcacgaatttaacaacaatt |
251 |
Q |
| |
|
||||||||||||| |||||||| |
|
|
| T |
47481058 |
gagcacgaatttagcaacaatt |
47481037 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 249; Significance: 1e-138; HSPs: 29)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 35582044 - 35582316
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
35582044 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
35582143 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35582144 |
gcatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
35582243 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
35582244 |
tcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatac |
35582316 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 21932629 - 21932357
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
21932629 |
atccacaattaagtatacccaaatcataattcacttacaatggcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
21932530 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21932529 |
gcatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
21932430 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
21932429 |
tcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatac |
21932357 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 21938799 - 21938527
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
21938799 |
atccacaattaagtatacccaaatcataattcacttacaatggcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
21938700 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21938699 |
gcatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
21938600 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
21938599 |
tcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatac |
21938527 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 22883332 - 22883060
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
22883332 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
22883233 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
22883232 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcatccataaacataccataatcatcaat |
22883133 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
22883132 |
tcaagcacaagaaaatagcatcacagcaagagcacaaatttaacaacaattgttcaccaacccattttcatac |
22883060 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 36990018 - 36989746
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
36990018 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
36989919 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36989918 |
gcatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
36989819 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
36989818 |
tcaagcacaagaaaatagcatcacagctagagcacgaatttaacaacaattgttcaccaacccattttcatac |
36989746 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 1219768 - 1219496
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
1219768 |
atccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataaccacatcaatgaaatatgaatcacatctcatttcaatcaaa |
1219669 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
1219668 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaat |
1219569 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
| | ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
1219568 |
taatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatac |
1219496 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 7425332 - 7425604
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||| ||||||||||| |||| |||||||||||| |||| ||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
7425332 |
atccataattaagtatatccaagtcatgattcactcacaacagcatcagttaacaataacaacatcaatggaatatgaattacatctcatttcaatcaaa |
7425431 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| || |
|
|
| T |
7425432 |
acatatcaaatttcatcaatgaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataaccatcgat |
7425531 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||| ||||||||| | |||||||||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
7425532 |
tcatgcacaagaaaataacatcacagcaagagcacgaatttagcaataattgttcatcaacccattttcatac |
7425604 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 26 - 273
Target Start/End: Complemental strand, 17471811 - 17471564
Alignment:
| Q |
26 |
atgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagc |
125 |
Q |
| |
|
|||||||| | |||||| ||||||||||||||||| |||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
17471811 |
atgattcattcacaataacatcagttaacaataacaacatcaatggaatatgaattacatcttatttcaatcaaaacatatcaaatttcatcaattaagt |
17471712 |
T |
 |
| Q |
126 |
ataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcaca |
225 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||| ||||| |
|
|
| T |
17471711 |
ataatttcattacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcaca |
17471612 |
T |
 |
| Q |
226 |
gcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
17471611 |
gcaagagcacgaatttatcaacaattgttcatcaacccattttcatac |
17471564 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 73 - 273
Target Start/End: Complemental strand, 10778146 - 10777946
Alignment:
| Q |
73 |
atatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaattt |
172 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10778146 |
atatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaattt |
10778047 |
T |
 |
| Q |
173 |
cacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcata |
272 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
10778046 |
cacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcata |
10777947 |
T |
 |
| Q |
273 |
c |
273 |
Q |
| |
|
| |
|
|
| T |
10777946 |
c |
10777946 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 73 - 273
Target Start/End: Original strand, 23514641 - 23514841
Alignment:
| Q |
73 |
atatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaattt |
172 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23514641 |
atatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaattt |
23514740 |
T |
 |
| Q |
173 |
cacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcata |
272 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
23514741 |
cacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcata |
23514840 |
T |
 |
| Q |
273 |
c |
273 |
Q |
| |
|
| |
|
|
| T |
23514841 |
c |
23514841 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 35791347 - 35791074
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||| ||||| |||||||||| |||| |||||| ||| | |||||||||| | ||| |||| ||||||| ||||||||||||||||||||| | | |
|
|
| T |
35791347 |
atccataattatgtatacccaagtcataattcaccctcaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcatttcaacaaca |
35791248 |
T |
 |
| Q |
101 |
acatatcaaa-tttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaa |
199 |
Q |
| |
|
|||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
35791247 |
acatatcaaaatttcatcaattaagtataatctcataacttaacatttatacatactttgaaacatgtaatttcactcacaaacataccataatcatcaa |
35791148 |
T |
 |
| Q |
200 |
ttcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|||| ||| ||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
35791147 |
ttcatgcacaagaaaataacatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatac |
35791074 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 11212313 - 11212041
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||| ||||| |||||||||| |||| || ||| |||| | |||||||||| | ||| |||| ||||||| ||||||||||||||||||||| | | |
|
|
| T |
11212313 |
atccataattatgtatacccaagtcataatccacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcatttcaacaaca |
11212214 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||| ||| |||| | || || ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
11212213 |
acatattaaaattcactacttgagtataatttcataacttaacatttatacacactttgaaacatgtaatttcacccacaaacataccataatcatcaat |
11212114 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||| ||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
11212113 |
tcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatac |
11212041 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 113 - 273
Target Start/End: Original strand, 23328678 - 23328837
Alignment:
| Q |
113 |
tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataaga |
212 |
Q |
| |
|
|||| ||||| ||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
23328678 |
tcattaattaggcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcaagtataaga |
23328777 |
T |
 |
| Q |
213 |
aaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|| ||| || | ||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
23328778 |
aac-agcaacataacaagagcacgaatttgacatgaattgttcatcaacccattttcatac |
23328837 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 113 - 273
Target Start/End: Original strand, 24616282 - 24616441
Alignment:
| Q |
113 |
tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataaga |
212 |
Q |
| |
|
|||| ||||| ||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||| ||||||||||| |||||| |
|
|
| T |
24616282 |
tcattaattaggcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataattatcaattcaagtataaga |
24616381 |
T |
 |
| Q |
213 |
aaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|| ||| || | ||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
24616382 |
aac-agcaacataacaagagcacgaatttgacatgaattgttcatcaacccattttcatac |
24616441 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 113 - 273
Target Start/End: Original strand, 24712658 - 24712817
Alignment:
| Q |
113 |
tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataaga |
212 |
Q |
| |
|
|||| ||||| ||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||| ||||||||||| |||||| |
|
|
| T |
24712658 |
tcattaattaggcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataattatcaattcaagtataaga |
24712757 |
T |
 |
| Q |
213 |
aaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|| ||| || | ||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
24712758 |
aac-agcaacataacaagagcacgaatttgacatgaattgttcatcaacccattttcatac |
24712817 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 113 - 273
Target Start/End: Original strand, 24745676 - 24745835
Alignment:
| Q |
113 |
tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataaga |
212 |
Q |
| |
|
|||| ||||| ||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||| ||||||||||| |||||| |
|
|
| T |
24745676 |
tcattaattaggcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataattatcaattcaagtataaga |
24745775 |
T |
 |
| Q |
213 |
aaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|| ||| || | ||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
24745776 |
aac-agcaacataacaagagcacgaatttgacatgaattgttcatcaacccattttcatac |
24745835 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 32950717 - 32950952
Alignment:
| Q |
17 |
acccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaaacatatcaaatttcat |
116 |
Q |
| |
|
|||||| ||||||||||| |||| | |||||||||| | | | |||| ||||||| |||||||||||||| |||||| | |||||| ||| |||| |
|
|
| T |
32950717 |
acccaagtcatgattcacccacaacaacatcagttaatagcatcaacatcaatggaacatgaatcacatctcttttcaacaacaacatagtaaaattcac |
32950816 |
T |
 |
| Q |
117 |
caattaagcataatttcataactta-acatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaa |
215 |
Q |
| |
|
|| || |||| ||||||||||||| || |||||||||||||||||||||||||||||| ||| || ||||| || |||||||| ||| || | ||||| |
|
|
| T |
32950817 |
catttgagcacaatttcataactttgacctttatacatactttgaaacatgtaatttcaaccacaatcatacaattatcatcaaatcatacacacgaaaa |
32950916 |
T |
 |
| Q |
216 |
tagcttcacagcaagagcacgaatttaacaacaatt |
251 |
Q |
| |
|
|| | |||||| ||||||||||||||||||||||| |
|
|
| T |
32950917 |
taacatcacagttagagcacgaatttaacaacaatt |
32950952 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 273
Target Start/End: Original strand, 27009981 - 27010121
Alignment:
| Q |
131 |
ttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaag |
230 |
Q |
| |
|
||||||||||| ||||| |||||| || ||||||||||||||||| | | ||||| || |||||||||||| ||||| || ||| | |||||||||| |
|
|
| T |
27009981 |
ttcataacttatcatttttacatattt--aaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcatacaaacataacatcacagcaag |
27010078 |
T |
 |
| Q |
231 |
agcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
27010079 |
agcacgaatttgacatgaattgttcatcaacccattttcatac |
27010121 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 161 - 273
Target Start/End: Complemental strand, 18778076 - 18777964
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaa |
260 |
Q |
| |
|
|||||||||||||||| | || |||| | | |||||||||| ||||| || ||| | ||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
18778076 |
aacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttaacatgaattgttcatcaa |
18777977 |
T |
 |
| Q |
261 |
cccattttcatac |
273 |
Q |
| |
|
||||||||||||| |
|
|
| T |
18777976 |
cccattttcatac |
18777964 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 273
Target Start/End: Complemental strand, 29188397 - 29188256
Alignment:
| Q |
130 |
tttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaa |
229 |
Q |
| |
|
||||| |||||| ||||| |||||| |||||| |||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | |||||| || |
|
|
| T |
29188397 |
tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaa |
29188300 |
T |
 |
| Q |
230 |
gagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|||||||||| || || ||||||||||| |||||||||||||| |
|
|
| T |
29188299 |
gagcacgaatctagcatgaattgttcatcgacccattttcatac |
29188256 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 272
Target Start/End: Complemental strand, 43443479 - 43443368
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaa |
260 |
Q |
| |
|
|||||||||||||||| | || ||||| | | |||||||||| ||||| || ||| | ||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
43443479 |
aacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttaacatgaattgttcatcaa |
43443380 |
T |
 |
| Q |
261 |
cccattttcata |
272 |
Q |
| |
|
||||||||||| |
|
|
| T |
43443379 |
tccattttcata |
43443368 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 273
Target Start/End: Original strand, 12542 - 12654
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaa |
260 |
Q |
| |
|
|||||||||||||||| | || |||| | | |||||||||| ||||| || ||| | |||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
12542 |
aacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaa |
12641 |
T |
 |
| Q |
261 |
cccattttcatac |
273 |
Q |
| |
|
||||||||||||| |
|
|
| T |
12642 |
cccattttcatac |
12654 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 273
Target Start/End: Original strand, 25426796 - 25426908
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaa |
260 |
Q |
| |
|
|||||||||||||||| | || |||| | | |||||||||| ||||| || ||| | |||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
25426796 |
aacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaa |
25426895 |
T |
 |
| Q |
261 |
cccattttcatac |
273 |
Q |
| |
|
||||||||||||| |
|
|
| T |
25426896 |
cccattttcatac |
25426908 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 273
Target Start/End: Original strand, 19500067 - 19500179
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaa |
260 |
Q |
| |
|
|||||||||||||||| | || |||| | | |||||||||| ||||| || ||| | |||||||||||||||||||||| || || |||||||||| |
|
|
| T |
19500067 |
aacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaagtgttcatcaa |
19500166 |
T |
 |
| Q |
261 |
cccattttcatac |
273 |
Q |
| |
|
||||||||||||| |
|
|
| T |
19500167 |
cccattttcatac |
19500179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 273
Target Start/End: Complemental strand, 22366565 - 22366453
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaa |
260 |
Q |
| |
|
|||||||||||||||| | || |||| | | |||||||||| ||||| || ||| | |||||||||||||||||||||| || ||||| ||||||| |
|
|
| T |
22366565 |
aacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgctcatcaa |
22366466 |
T |
 |
| Q |
261 |
cccattttcatac |
273 |
Q |
| |
|
||||||||||||| |
|
|
| T |
22366465 |
cccattttcatac |
22366453 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 273
Target Start/End: Complemental strand, 4200117 - 4199957
Alignment:
| Q |
112 |
ttcatcaattaagcataat-ttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataa |
210 |
Q |
| |
|
|||| ||||| |||||||| ||||||||||| ||||| | |||| | |||| |||||||||||||| | || ||||| | | |||||||||| ||||| |
|
|
| T |
4200117 |
ttcaccaatttagcataatattcataacttatcatttttgcata-tatgaa-catgtaatttcaccaacaatcatacaactaacatcaattcatgcatac |
4200020 |
T |
 |
| Q |
211 |
gaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|| ||| | ||||| |||||||||||||||| || |||| ||||||||| ||||||||||| |
|
|
| T |
4200019 |
aaacataacatcacaacaagagcacgaatttagcatgaattattcatcaactcattttcatac |
4199957 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 221 - 273
Target Start/End: Complemental strand, 21073619 - 21073567
Alignment:
| Q |
221 |
tcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|||||||||||||||||||||| || |||||||||| ||||||||||||||| |
|
|
| T |
21073619 |
tcacagcaagagcacgaatttagcatgaattgttcattaacccattttcatac |
21073567 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 248
Target Start/End: Original strand, 34939398 - 34939531
Alignment:
| Q |
114 |
catcaattaagcataattt-cataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataaga |
212 |
Q |
| |
|
|||||||| |||| ||||| |||||||| |||||| |||||| || ||||||| |||||||| | || ||||| || |||||||||||| ||||| | |
|
|
| T |
34939398 |
catcaattgagcacaattttcataacttcacatttttacataattg--aacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaa |
34939495 |
T |
 |
| Q |
213 |
aaatagcttcacagcaagagcacgaatttaacaaca |
248 |
Q |
| |
|
| ||| | |||||| |||||||||||||| ||||| |
|
|
| T |
34939496 |
acataacatcacagttagagcacgaatttagcaaca |
34939531 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 251
Target Start/End: Complemental strand, 18531261 - 18531073
Alignment:
| Q |
62 |
acattaatggaatatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataattt-cataacttaacatttatacatactttga |
160 |
Q |
| |
|
|||| ||| ||| |||||||| |||||| ||||| | ||| || |||| |||| ||||| | || ||||| || ||||| |||||| |||||| || |
|
|
| T |
18531261 |
acatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgaacacaattttcacaacttcacatttttacataattg-- |
18531164 |
T |
 |
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaatt |
251 |
Q |
| |
|
|||||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | |||||| ||||||||||||| |||||||| |
|
|
| T |
18531163 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaatt |
18531073 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 249; Significance: 1e-138; HSPs: 16)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 17004646 - 17004918
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
17004646 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
17004745 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17004746 |
gcatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
17004845 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
17004846 |
tcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatac |
17004918 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 18060006 - 18059734
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
18060006 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttgacaataaccacatcaatggaatatgaatcacatctcatttcaatcaaa |
18059907 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18059906 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
18059807 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18059806 |
tcatgcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
18059734 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 38055339 - 38055067
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
38055339 |
atccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcttttcaatcaaa |
38055240 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38055239 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
38055140 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| ||||||||| | |||||| || |||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
38055139 |
tcaagcacaagaaaataacatcacagtaaaagcacgaatttaacaacaattgttcaccaacccattttcatac |
38055067 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 46523397 - 46523669
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||| |||||||||||||||| |||||||||||| |||| ||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
46523397 |
atccataattaagtatacccaagtcatgattcactcacaacagcatcagttaacaataacaacatcaatggaatatgaattacatctcatttcaatcaaa |
46523496 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||| |
|
|
| T |
46523497 |
acatatcaaatttcatcaatgaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataacataaacatcaat |
46523596 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||| ||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
46523597 |
tcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatac |
46523669 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 73 - 273
Target Start/End: Original strand, 17148647 - 17148847
Alignment:
| Q |
73 |
atatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaattt |
172 |
Q |
| |
|
|||||| | ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17148647 |
atatgatttacatctcatttcaatcaaagcatatcaaatttcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaattt |
17148746 |
T |
 |
| Q |
173 |
cacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcata |
272 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||| ||||||||| | | ||| |||||||||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
17148747 |
cacccacaaacataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcata |
17148846 |
T |
 |
| Q |
273 |
c |
273 |
Q |
| |
|
| |
|
|
| T |
17148847 |
c |
17148847 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 131 - 273
Target Start/End: Complemental strand, 19962617 - 19962475
Alignment:
| Q |
131 |
ttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaag |
230 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||| | |||||||| |
|
|
| T |
19962617 |
ttcataacttaacatttatacatactttgaaacatgtaattccacccataaacataccataatcatcaattcaaacacaagaaaatagcattacagcaag |
19962518 |
T |
 |
| Q |
231 |
agcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
19962517 |
agcacgaatttaacaacaattgtccatcaacccattttcatac |
19962475 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 113 - 273
Target Start/End: Complemental strand, 7641069 - 7640910
Alignment:
| Q |
113 |
tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataaga |
212 |
Q |
| |
|
|||| ||||| ||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
7641069 |
tcattaattaggcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcaagtataaga |
7640970 |
T |
 |
| Q |
213 |
aaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|| ||| || | ||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
7640969 |
aac-agcaacataacaagagcacgaatttgacatgaattgttcatcaacccattttcatac |
7640910 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 113 - 273
Target Start/End: Original strand, 22035568 - 22035727
Alignment:
| Q |
113 |
tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataaga |
212 |
Q |
| |
|
|||| ||||| ||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
22035568 |
tcattaattaggcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcaagtataaga |
22035667 |
T |
 |
| Q |
213 |
aaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|| ||| || | ||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
22035668 |
aac-agcaacataacaagagcacgaatttgacatgaattgttcatcaacccattttcatac |
22035727 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 130 - 273
Target Start/End: Original strand, 22227947 - 22228088
Alignment:
| Q |
130 |
tttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaa |
229 |
Q |
| |
|
|||||||||||| ||||| |||||| |||||| ||||||||||||| | || ||||| || |||||||||||| ||| ||||||||| | ||||||||| |
|
|
| T |
22227947 |
tttcataacttatcatttttacata-tttgaa-catgtaatttcactaacaatcatacaattatcatcaattcatgcacaagaaaataacatcacagcaa |
22228044 |
T |
 |
| Q |
230 |
gagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
22228045 |
gagcacgaatttagcaagaattgttcatcaacccattttcatac |
22228088 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 130 - 273
Target Start/End: Original strand, 22232644 - 22232785
Alignment:
| Q |
130 |
tttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaa |
229 |
Q |
| |
|
|||||||||||| ||||| |||||| |||||| ||||||||||||| | || ||||| || |||||||||||| ||| ||||||||| | ||||||||| |
|
|
| T |
22232644 |
tttcataacttatcatttttacata-tttgaa-catgtaatttcactaacaatcatacaattatcatcaattcatgcacaagaaaataacatcacagcaa |
22232741 |
T |
 |
| Q |
230 |
gagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
22232742 |
gagcacgaatttagcaagaattgttcatcaacccattttcatac |
22232785 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 161 - 273
Target Start/End: Complemental strand, 5072472 - 5072360
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaa |
260 |
Q |
| |
|
|||||||||||||||| | || ||||| | | |||||||||| ||||| || ||| | |||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
5072472 |
aacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatataaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaa |
5072373 |
T |
 |
| Q |
261 |
cccattttcatac |
273 |
Q |
| |
|
||||||||||||| |
|
|
| T |
5072372 |
cccattttcatac |
5072360 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 273
Target Start/End: Complemental strand, 18601202 - 18601090
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaa |
260 |
Q |
| |
|
|||||||||||||||| | || ||||| | | |||||||||| ||||| || ||| | |||||||||||||| ||||||| || ||||||||||||| |
|
|
| T |
18601202 |
aacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcatgaatttagcatgaattgttcatcaa |
18601103 |
T |
 |
| Q |
261 |
cccattttcatac |
273 |
Q |
| |
|
||||||||||||| |
|
|
| T |
18601102 |
cccattttcatac |
18601090 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 130 - 273
Target Start/End: Original strand, 2116393 - 2116534
Alignment:
| Q |
130 |
tttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaa |
229 |
Q |
| |
|
||||| |||||| ||||| |||||| |||||| |||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | |||||| || |
|
|
| T |
2116393 |
tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaa |
2116490 |
T |
 |
| Q |
230 |
gagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||||| || || ||||||||||||||||||||| |||| |
|
|
| T |
2116491 |
aagcacgaatctagcatgaattgttcatcaacccatttttatac |
2116534 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 130 - 273
Target Start/End: Original strand, 45051561 - 45051702
Alignment:
| Q |
130 |
tttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaa |
229 |
Q |
| |
|
||||| |||||| ||||| |||||| |||||| |||||||||||||| | || ||||| || |||||||||||| ||||| || || | |||||| || |
|
|
| T |
45051561 |
tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcacagtaa |
45051658 |
T |
 |
| Q |
230 |
gagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|| ||||||| || || |||||||||||||||||||||||||| |
|
|
| T |
45051659 |
gaacacgaatctagcatgaattgttcatcaacccattttcatac |
45051702 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 20913168 - 20913287
Alignment:
| Q |
130 |
tttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaa |
229 |
Q |
| |
|
|||||||||||| ||||| |||||| | |||| |||||||||||||| | || | ||| || |||||||||||| ||||| || ||| | |||||| |
|
|
| T |
20913168 |
tttcataacttatcatttttacata-tatgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttg |
20913265 |
T |
 |
| Q |
230 |
gagcacgaatttaacaacaatt |
251 |
Q |
| |
|
||||||||||||| |||||||| |
|
|
| T |
20913266 |
gagcacgaatttagcaacaatt |
20913287 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 20931483 - 20931602
Alignment:
| Q |
130 |
tttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaa |
229 |
Q |
| |
|
|||||||||||| ||||| |||||| | |||| |||||||||||||| | || | ||| || |||||||||||| ||||| || ||| | |||||| |
|
|
| T |
20931483 |
tttcataacttatcatttttacata-tatgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttg |
20931580 |
T |
 |
| Q |
230 |
gagcacgaatttaacaacaatt |
251 |
Q |
| |
|
||||||||||||| |||||||| |
|
|
| T |
20931581 |
gagcacgaatttagcaacaatt |
20931602 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 230; Significance: 1e-127; HSPs: 19)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 4 - 273
Target Start/End: Original strand, 18168981 - 18169250
Alignment:
| Q |
4 |
cacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaaaca |
103 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18168981 |
cacaattaagtatatccaaatcatgattcactcacaatagcattatttaacaataaccacatcaatggaatatgaatcacatctcatttcaatcaaaaca |
18169080 |
T |
 |
| Q |
104 |
tatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattca |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
18169081 |
tatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattca |
18169180 |
T |
 |
| Q |
204 |
agcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
18169181 |
tgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatac |
18169250 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 19020494 - 19020766
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
19020494 |
atccacaattaagtatactcaaatcatgattcactcacaatagcatcagttaacaataacaacatcaatggaatatgaattacatctcatttcaatcaaa |
19020593 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
19020594 |
acatatcaaatttcatccattaaggataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaat |
19020693 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||| ||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
19020694 |
tcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatac |
19020766 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 15287493 - 15287221
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||| |||||||||||||||| |||||||||||| |||| ||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
15287493 |
atccataattaagtatacccaagtcatgattcactcacaacagcatcagttaacaataacaacatcaatggaatatgaattacatctcatttcaatcaaa |
15287394 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| || |
|
|
| T |
15287393 |
acatatcaaatttcatcaatggagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataaccatcgat |
15287294 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||| ||||||||||| |||||||||||||||||||||| | | |||||||||||| ||||||||||||| |
|
|
| T |
15287293 |
tcatgcacaagaaaatagcatcacagcaagagcacgaatttagctataattgttcatcatcccattttcatac |
15287221 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 15294602 - 15294330
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||| |||||||||||||||| |||||||||||| |||| ||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
15294602 |
atccataattaagtatacccaagtcatgattcactcacaacagcatcagttaacaataacaacatcaatggaatatgaattacatctcatttcaatcaaa |
15294503 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||| || |
|
|
| T |
15294502 |
acatatcaaatttcatcaatggagtataatttcataacttaacatttatatatactttgaaacatgtaatttcacccacaaacataccataaccatcgat |
15294403 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||| ||||||||||| |||||||||||||||||||||| | | |||||||||||| ||||||||||||| |
|
|
| T |
15294402 |
tcatgcacaagaaaatagcatcacagcaagagcacgaatttagctataattgttcatcatcccattttcatac |
15294330 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 73 - 272
Target Start/End: Complemental strand, 7132241 - 7132042
Alignment:
| Q |
73 |
atatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaattt |
172 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7132241 |
atatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaattt |
7132142 |
T |
 |
| Q |
173 |
cacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcata |
272 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
7132141 |
cacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcata |
7132042 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 73 - 273
Target Start/End: Original strand, 20000803 - 20001003
Alignment:
| Q |
73 |
atatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaattt |
172 |
Q |
| |
|
|||||| | |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20000803 |
atatgatttacatctcatttcaaccaaaacatatcaaatttcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaattt |
20000902 |
T |
 |
| Q |
173 |
cacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcata |
272 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||| ||||||||| | | ||| |||||||||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
20000903 |
cacccagaaacataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcata |
20001002 |
T |
 |
| Q |
273 |
c |
273 |
Q |
| |
|
| |
|
|
| T |
20001003 |
c |
20001003 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 7 - 273
Target Start/End: Complemental strand, 17145899 - 17145633
Alignment:
| Q |
7 |
aattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaaacatat |
106 |
Q |
| |
|
||||| |||||||||| |||| |||||| |||| | |||||||||| | ||| |||| ||||||| ||||||||||||||||||||| | ||||||| |
|
|
| T |
17145899 |
aattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcatttcaacaacaacatat |
17145800 |
T |
 |
| Q |
107 |
caaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagc |
206 |
Q |
| |
|
|||| |||| |||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |
|
|
| T |
17145799 |
caaaattcactaattgagtataatttcacaacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgt |
17145700 |
T |
 |
| Q |
207 |
ataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
| ||||||||||| |||||| |||||||||||||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
17145699 |
acaagaaaatagcatcacagtaagagcacgaatttaacatcaattgttcatcaactcattttcatac |
17145633 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 7 - 273
Target Start/End: Original strand, 18248232 - 18248498
Alignment:
| Q |
7 |
aattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaaacatat |
106 |
Q |
| |
|
||||| ||||||| || |||| |||||| |||| | |||||||||| | ||| |||| ||||||| ||||||||||||||||||||| | ||||||| |
|
|
| T |
18248232 |
aattatgtataccaaagtcataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcatttcaacaacaacatat |
18248331 |
T |
 |
| Q |
107 |
caaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagc |
206 |
Q |
| |
|
||| |||| |||| || ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||| || |
|
|
| T |
18248332 |
taaaattcactaattgagtataatttcatatcttaacatttatacatactttgaaacatgtaatttcatccacaaacataccataatcctcaattcatgc |
18248431 |
T |
 |
| Q |
207 |
ataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
18248432 |
acaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatac |
18248498 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 114 - 273
Target Start/End: Original strand, 22738390 - 22738549
Alignment:
| Q |
114 |
catcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaa |
213 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||| |
|
|
| T |
22738390 |
catcaattaagcataatttcacaacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaa |
22738489 |
T |
 |
| Q |
214 |
aatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||| ||||||||| ||| ||||||||||||| |
|
|
| T |
22738490 |
aatagcatcacagcaagaacacgaatttaacatcaattgttcctcagcccattttcatac |
22738549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 7 - 203
Target Start/End: Original strand, 8374522 - 8374718
Alignment:
| Q |
7 |
aattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaaacatat |
106 |
Q |
| |
|
||||| |||||||||| ||| |||||| |||| | |||||||||| | ||| |||| ||||||| ||||||||||||||||||||| | ||||||| |
|
|
| T |
8374522 |
aattatgtatacccaagccataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcatttcaacaacaacatat |
8374621 |
T |
 |
| Q |
107 |
caaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattca |
203 |
Q |
| |
|
||| |||| |||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
8374622 |
taaaattcactaattgagtataatttcataacttaacatttatacatactttgaagcatgtaatttcacccacaaacataccataatcatcaattca |
8374718 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 113 - 273
Target Start/End: Original strand, 26339140 - 26339299
Alignment:
| Q |
113 |
tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataaga |
212 |
Q |
| |
|
|||| ||||||||| ||||||| ||||| ||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
26339140 |
tcattaattaagcaaaatttcacaacttgacatttatacatagattgaaccatgtaatttcatccacaaacataccataatcatcaattcaagtataaga |
26339239 |
T |
 |
| Q |
213 |
aaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|| ||| || | ||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
26339240 |
aac-agcaacataacaagagcacgaatttgacatgaattgttcatcaacccattttcatac |
26339299 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 128 - 273
Target Start/End: Complemental strand, 22352184 - 22352040
Alignment:
| Q |
128 |
aatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagc |
227 |
Q |
| |
|
||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | |||||||| ||| || | | |
|
|
| T |
22352184 |
aatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataagaaac-agcaacataac |
22352086 |
T |
 |
| Q |
228 |
aagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| |||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
22352085 |
aagagcatgaatttgacatgaattgttcatcaacccattttcatac |
22352040 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 132 - 273
Target Start/End: Original strand, 10644360 - 10644499
Alignment:
| Q |
132 |
tcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaaga |
231 |
Q |
| |
|
|||||||||||||||| |||||| |||||| ||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | ||||||||||| |
|
|
| T |
10644360 |
tcataacttaacatttttacata-tttgaa-catgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagcaaga |
10644457 |
T |
 |
| Q |
232 |
gcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
10644458 |
gcacgaatttgacatgaattgttcatcaacccattttcatac |
10644499 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 209 - 273
Target Start/End: Original strand, 8378367 - 8378431
Alignment:
| Q |
209 |
aagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
8378367 |
aagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatac |
8378431 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 62 - 209
Target Start/End: Complemental strand, 40885748 - 40885602
Alignment:
| Q |
62 |
acattaatggaatatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaa |
161 |
Q |
| |
|
|||| ||| ||| |||||||| |||||| ||||| | ||| || |||| |||| ||||| |||||||||||||||||| |||||||||||||||||| | |
|
|
| T |
40885748 |
acatcaattgaacatgaatcatatctcaattcaacaataacttagcaaagttcaccaattgagcataatttcataacttgacatttatacatactttg-a |
40885650 |
T |
 |
| Q |
162 |
acatgtaatttcacccataaacataccataatcatcaattcaagcata |
209 |
Q |
| |
|
||||||||||||||| | |||||| | || |||| ||||||| ||||| |
|
|
| T |
40885649 |
acatgtaatttcaccaacaaacattcaattatcaccaattcatgcata |
40885602 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 273
Target Start/End: Original strand, 47357882 - 47357934
Alignment:
| Q |
221 |
tcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|||||||||||||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
47357882 |
tcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatac |
47357934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 251
Target Start/End: Complemental strand, 15675301 - 15675095
Alignment:
| Q |
44 |
catcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataattt-cataacttaa |
142 |
Q |
| |
|
||||| ||||||| || |||| ||| ||| |||||||| |||||| ||||| | ||| || |||| |||| ||||| |||| ||||| || ||||| | |
|
|
| T |
15675301 |
catcaattaacaacaataacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttca |
15675202 |
T |
 |
| Q |
143 |
catttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaattta |
242 |
Q |
| |
|
||||| |||||| || |||||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | |||||| ||||||||||||| |
|
|
| T |
15675201 |
catttttacataattg--aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattta |
15675104 |
T |
 |
| Q |
243 |
acaacaatt |
251 |
Q |
| |
|
|||||||| |
|
|
| T |
15675103 |
gcaacaatt |
15675095 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 251
Target Start/End: Complemental strand, 10104444 - 10104256
Alignment:
| Q |
62 |
acattaatggaatatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataattt-cataacttaacatttatacatactttga |
160 |
Q |
| |
|
|||| ||| ||| |||||||| |||||| ||||| | ||| || |||| |||| ||||| |||| ||||| || ||||| |||||| |||||| || |
|
|
| T |
10104444 |
acatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattg-- |
10104347 |
T |
 |
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaatt |
251 |
Q |
| |
|
|||||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | |||||| ||||||| ||||| |||||||| |
|
|
| T |
10104346 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacggatttagcaacaatt |
10104256 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 209
Target Start/End: Original strand, 31115680 - 31115844
Alignment:
| Q |
44 |
catcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataattt-cataacttaa |
142 |
Q |
| |
|
||||| ||||||| || |||| ||| ||| |||||||| |||||| ||||| | ||| || ||| |||| ||||| |||||||||| || ||||| | |
|
|
| T |
31115680 |
catcaattaacaacaataacatcaattgaacatgaatcatatctcaattcaacaacaacttaggaaaattcaccaattgagcataattttcacaacttca |
31115779 |
T |
 |
| Q |
143 |
catttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcata |
209 |
Q |
| |
|
||||| |||||| | | |||||||||||||||| | || ||||| || |||||||||||| ||||| |
|
|
| T |
31115780 |
catttttacataat--ggaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata |
31115844 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 229; Significance: 1e-126; HSPs: 4)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 154255 - 153983
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||| |
|
|
| T |
154255 |
atccacaattaagtatacccaaatcatgattcacccacaatagcataagttaacaataaccacatcaatggaatatgattcacatctcatttcaatcaaa |
154156 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
154155 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaacttcacccacaaacataccataatcatcaat |
154056 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
154055 |
tcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatac |
153983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 273
Target Start/End: Complemental strand, 169936 - 169884
Alignment:
| Q |
221 |
tcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|||||||||||||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
169936 |
tcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatac |
169884 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 36327 - 36373
Alignment:
| Q |
227 |
caagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|||||||||||||||| || ||||||||||||||||| |||||||| |
|
|
| T |
36327 |
caagagcacgaatttagcatgaattgttcatcaacccagtttcatac |
36373 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 251
Target Start/End: Original strand, 48765 - 48855
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaatt |
251 |
Q |
| |
|
|||||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | |||||| ||||||||||||| |||||||| |
|
|
| T |
48765 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaatt |
48855 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0213 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: scaffold0213
Description:
Target: scaffold0213; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 4 - 273
Target Start/End: Original strand, 29173 - 29442
Alignment:
| Q |
4 |
cacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaaaca |
103 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| |||||| ||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29173 |
cacaattaagtataaccaaatcataattcactaacaataacataaattaacaataaccacatcaatggaatatgaatcacatctcatttcaatcaaaaca |
29272 |
T |
 |
| Q |
104 |
tatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattca |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
29273 |
tatcaaatttcatcaattaagcataatttcataacttaacatttacacatactttgaaacatgtaatttcacccataaacataacataatcaacaattca |
29372 |
T |
 |
| Q |
204 |
agcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29373 |
agcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
29442 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0761 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: scaffold0761
Description:
Target: scaffold0761; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 1823 - 1551
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||| |||||| | ||||||||||||||||||| |
|
|
| T |
1823 |
atccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataacaacatcaattttatatgatttacatctcatttcaatcaaa |
1724 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
1723 |
acatatcaaatttcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaat |
1624 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||| ||||||||||| |||||||||| |||||| |||| |||||||||||||||||||||||||||||| |
|
|
| T |
1623 |
tcatgcacaagaaaatagcatcacagcaagtgcacgattttagcaacaattgttcatcaacccattttcatac |
1551 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0467 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: scaffold0467
Description:
Target: scaffold0467; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 10587 - 10315
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| || |||||||||||||||||||| ||| |||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
10587 |
atccacaattaagtatacccaagtcatgattccctcacaatagcatcagttaacaacaacaacatcaatggaatatgaattacatctcatttcaatcaaa |
10488 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
10487 |
acatatcaaatttcatcaattaagtataatttcataacttagcatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaat |
10388 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||| ||||||||| | |||||||||||||||||||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
10387 |
tcatgcacaagaaaatatcatcacagcaagagcacgaatttagcaacaattattcatcaacccattttcatac |
10315 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0383 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: scaffold0383
Description:
Target: scaffold0383; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 2400 - 2672
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||| |||| |||||||||||||| ||||||||||||||| ||| |
|
|
| T |
2400 |
atccacaattaagtatacccaaaccatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattacatctcatttcaataaaa |
2499 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
2500 |
acatatcaaatttcatcaattaagtataatttcatgacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataagcatcaat |
2599 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||| ||||||||||| |||| ||||||||||||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
2600 |
tcatgcacaagaaaatagcatcacggcaagagcacgaattgagcaacaattgttcatcaacccattttcatac |
2672 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1666 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold1666
Description:
Target: scaffold1666; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 244 - 3
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||| ||||||||| ||||||||||||||| ||| |
|
|
| T |
244 |
atccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataactacatcaatgtaatatgaattacatctcatttcaattaaa |
145 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
144 |
acatatcaaatttcatcaattaagtataatttcataacttaacatttacacatactttgaaacatgtaatttcacccacaaacataccataatcatcaat |
45 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaattta |
242 |
Q |
| |
|
||| ||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
44 |
tcatgcacaagaaaatagcctcacagcaagagcacgaattta |
3 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 34406 - 34140
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||| |||| ||||||||||| |||||||||||| ||||||||||||||||| | ||| |||||||||||| |||||||| |||||||||||| | | |
|
|
| T |
34406 |
atccataatttagtatacccaagtcatgattcactcacaatagcatcagttaatagcaacaacattaatggaacatgaatcatatctcatttcaacaaca |
34307 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||| || ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
34306 |
acatatccaaattcatcaattaagtataacttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaat |
34207 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattt |
267 |
Q |
| |
|
||| ||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
34206 |
tcatgcacaagaaaatagcttcacagcaagagcacgaatttagcaacaatttttcatcaacccattt |
34140 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1500 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: scaffold1500
Description:
Target: scaffold1500; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 73 - 273
Target Start/End: Complemental strand, 1690 - 1490
Alignment:
| Q |
73 |
atatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaattt |
172 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1690 |
atatgatttacatctcatttcaatcaaaacatatcaaatttcatcaattaagtataatttcataacttaacatttatacatactttgaaacatgtaattt |
1591 |
T |
 |
| Q |
173 |
cacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcata |
272 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||| ||||||||||| | ||| |||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
1590 |
cacccataaacataccataatcatcaattcatgcacaagaaaatagcattacaacaagagcacgaatttagcaacaattgttcatcaacccattttcata |
1491 |
T |
 |
| Q |
273 |
c |
273 |
Q |
| |
|
| |
|
|
| T |
1490 |
c |
1490 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0066 (Bit Score: 137; Significance: 1e-71; HSPs: 2)
Name: scaffold0066
Description:
Target: scaffold0066; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 13 - 273
Target Start/End: Original strand, 54436 - 54696
Alignment:
| Q |
13 |
gtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaaacatatcaaatt |
112 |
Q |
| |
|
|||||||||| ||||||||||| |||| | |||||||||| | ||| |||| ||||||| ||||||||||||||||||||| | ||||||||||| | |
|
|
| T |
54436 |
gtatacccaactcatgattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcatttcaacaacaacatatcaaaat |
54535 |
T |
 |
| Q |
113 |
tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataaga |
212 |
Q |
| |
|
||| ||||| || | ||||||||||||| ||||||||||||||||||||||||| ||||||||||| || ||||| || |||||||||||| ||| |||| |
|
|
| T |
54536 |
tcaccaattgagtacaatttcataacttgacatttatacatactttgaaacatgcaatttcacccacaatcatacaattatcatcaattcatgcacaaga |
54635 |
T |
 |
| Q |
213 |
aaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
54636 |
aaatagcatcacagcaaggacacgaatttaacaacaattattcatcaacccattttcatac |
54696 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0066; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 44 - 273
Target Start/End: Original strand, 45081 - 45310
Alignment:
| Q |
44 |
catcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataatttcataacttaac |
143 |
Q |
| |
|
|||||||||| | ||| |||| ||||||| ||||||||||||||||||||| | ||||||||||| |||| ||||| || | ||||||| ||||| || |
|
|
| T |
45081 |
catcagttaatagcaacaacatcaatggaacatgaatcacatctcatttcaacaacaacatatcaaaattcaccaattgagtacaatttcaaaacttgac |
45180 |
T |
 |
| Q |
144 |
atttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaa |
243 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || ||||| || |||||||||||| ||| | |||||||| ||||| |||| |||||||||||| |
|
|
| T |
45181 |
atttatacatactttgaaacatgtaatttcacccacaatcatacaattatcatcaattcatgcacatcaaaatagcatcacaacaagggcacgaatttaa |
45280 |
T |
 |
| Q |
244 |
caacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|||||||| ||||||||||||||||||||| |
|
|
| T |
45281 |
caacaattattcatcaacccattttcatac |
45310 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0191 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold0191
Description:
Target: scaffold0191; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 7704 - 7432
Alignment:
| Q |
1 |
atccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaa |
100 |
Q |
| |
|
||||| ||||| |||||||||| |||| ||||||| |||| | |||||||||| || || || ||||||||| |||||||||||||||||| || | | |
|
|
| T |
7704 |
atccataattatgtatacccaagtcataattcactcacaacaacatcagttaataacaataaccttaatggaacatgaatcacatctcattttaacaaca |
7605 |
T |
 |
| Q |
101 |
acatatcaaatttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat |
200 |
Q |
| |
|
||||||||| |||| |||| || ||||||||||| ||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||| |
|
|
| T |
7604 |
acatatcaagattcactaattgagtataatttcatagcttgacatttatacatactttgaaacatgtaatttcatccacaaacataccataatcttcaat |
7505 |
T |
 |
| Q |
201 |
tcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| ||| ||||||||||| ||||| |||||||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
7504 |
tcatgcacaagaaaatagcatcacaacaagagcacgaatttagtaataattgttcatcaacccattttcatac |
7432 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0017
Description:
Target: scaffold0017; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 13 - 272
Target Start/End: Original strand, 53895 - 54153
Alignment:
| Q |
13 |
gtatacccaaatcatgattcacttacaatag-catcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaa-aacatatcaaa |
110 |
Q |
| |
|
|||||||||| ||||| |||||| |||||| ||||| ||||||| ||| |||| || | | ||||||||||||| ||||| |||| |||| |||||| |
|
|
| T |
53895 |
gtatacccaagtcatggttcactcacaataatcatcaattaacaacaacaacatcaaag-agcatgaatcacatcttatttc--tcaacaacacatcaaa |
53991 |
T |
 |
| Q |
111 |
t-ttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcata |
209 |
Q |
| |
|
|||| ||||| | ||||||||| ||||||||| |||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||| ||| | |
|
|
| T |
53992 |
aattcaccaattgggtataatttcacaacttaacaattatacatgctttgaa-catgtaatttcacccacaaacataccataatcatcaattcatgcaca |
54090 |
T |
 |
| Q |
210 |
agaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcata |
272 |
Q |
| |
|
|||||| ||| |||||| ||||||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
54091 |
agaaaacagcatcacagtaagagcacgaatttagcatcaattgttcatcaacccattttcata |
54153 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0892 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0892
Description:
Target: scaffold0892; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 13 - 272
Target Start/End: Original strand, 3434 - 3692
Alignment:
| Q |
13 |
gtatacccaaatcatgattcacttacaatag-catcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaa-aacatatcaaa |
110 |
Q |
| |
|
|||||||||| ||||| |||||| |||||| ||||||||||||| ||| |||| || | | ||||||||||||| ||||| |||| |||| |||||| |
|
|
| T |
3434 |
gtatacccaagtcatggttcactcacaataatcatcagttaacaacaacaacatcaaag-agcatgaatcacatcttatttc--tcaacaacacatcaaa |
3530 |
T |
 |
| Q |
111 |
t-ttcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcata |
209 |
Q |
| |
|
|||| ||||| | ||||||||| ||||||||| |||||||| ||||||| |||||||||||||||| || ||||||||||||||||||||| | | | |
|
|
| T |
3531 |
aattcaccaattgggtataatttcacaacttaacaattatacatgctttgaa-catgtaatttcacccacaatcataccataatcatcaattcatggaca |
3629 |
T |
 |
| Q |
210 |
agaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcata |
272 |
Q |
| |
|
|||||| | | |||||| |||||||| |||||| || |||||||||||||||||||||||||| |
|
|
| T |
3630 |
agaaaacaacatcacagtaagagcactaatttagcatcaattgttcatcaacccattttcata |
3692 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 130 - 273
Target Start/End: Complemental strand, 5329 - 5188
Alignment:
| Q |
130 |
tttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaa |
229 |
Q |
| |
|
|||||||||||| ||||| |||||| |||||| |||||||||||||| | || ||||| || |||||||||||| ||| ||||||||||| ||||||||| |
|
|
| T |
5329 |
tttcataacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgcacaagaaaatagcatcacagcaa |
5232 |
T |
 |
| Q |
230 |
gagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
5231 |
gagcacgaatttaacaagaattgttcatcaacccattttcatac |
5188 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0183 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0183
Description:
Target: scaffold0183; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 113 - 273
Target Start/End: Original strand, 6718 - 6877
Alignment:
| Q |
113 |
tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataaga |
212 |
Q |
| |
|
|||| ||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | |||||| |
|
|
| T |
6718 |
tcattaattaagcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataaga |
6817 |
T |
 |
| Q |
213 |
aaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|| ||| || | ||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
6818 |
aac-agcaacataacaagagcacgaatttgacatgaattgttcatcaacccattttcatac |
6877 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0084 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0084
Description:
Target: scaffold0084; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 15 - 251
Target Start/End: Complemental strand, 56341 - 56105
Alignment:
| Q |
15 |
atacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaaacatatcaaatttc |
114 |
Q |
| |
|
|||||||| ||||||||||| |||| | ||||| |||| | | | |||| ||||||| ||||||||||| || |||||| | ||| || |||| ||| |
|
|
| T |
56341 |
atacccaagtcatgattcacccacaacaacatcaattaatagcatcaacatcaatggaacatgaatcacatatcttttcaacaacaacttagcaaaattc |
56242 |
T |
 |
| Q |
115 |
atcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaa |
214 |
Q |
| |
|
| || || |||| ||||||||||||| ||||||||||||||||| ||||||||||||||| ||| || ||||| || |||||||| ||| ||| | |||| |
|
|
| T |
56241 |
accatttgagcacaatttcataacttgacatttatacatactttaaaacatgtaatttcagccacaatcatacaattatcatcaaatcatgcacacgaaa |
56142 |
T |
 |
| Q |
215 |
atagcttcacagcaagagcacgaatttaacaacaatt |
251 |
Q |
| |
|
||| | |||||| ||||||||||||||||||||||| |
|
|
| T |
56141 |
ataacatcacagttagagcacgaatttaacaacaatt |
56105 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 113 - 273
Target Start/End: Original strand, 7330 - 7489
Alignment:
| Q |
113 |
tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataaga |
212 |
Q |
| |
|
|||| ||||| ||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||| | ||||| |
|
|
| T |
7330 |
tcattaattaggcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag- |
7428 |
T |
 |
| Q |
213 |
aaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|| ||| || | ||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
7429 |
caacagcaacataacaagagcacgaatttgacatgaattgttcatcaacccattttcatac |
7489 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0369 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0369
Description:
Target: scaffold0369; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 161 - 273
Target Start/End: Original strand, 3890 - 4002
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaa |
260 |
Q |
| |
|
|||||||||||||||| | || ||||| || |||||||||||| ||| ||||||||||| ||||| |||||||||||||||| ||| ||||||||||||| |
|
|
| T |
3890 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaagaattgttcatcaa |
3989 |
T |
 |
| Q |
261 |
cccattttcatac |
273 |
Q |
| |
|
||||||||||||| |
|
|
| T |
3990 |
cccattttcatac |
4002 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0529 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0529
Description:
Target: scaffold0529; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 75 - 273
Target Start/End: Original strand, 3045 - 3242
Alignment:
| Q |
75 |
atgaatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataattt-cataacttaacatttatacatactttgaaacatgtaatttc |
173 |
Q |
| |
|
|||||||| |||||| ||||| | ||| || |||| |||| ||||| |||| ||||| || ||||| |||||| |||||| || ||||||||||||| |
|
|
| T |
3045 |
atgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattg--aacatgtaatttc |
3142 |
T |
 |
| Q |
174 |
acccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| | || ||||| || |||||||||||| | ||| || ||| | |||||||||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
3143 |
accaacaatcatacaattatcatcaattcatggatacaaacataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatac |
3242 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0155 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0155
Description:
Target: scaffold0155; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 113 - 273
Target Start/End: Complemental strand, 23884 - 23725
Alignment:
| Q |
113 |
tcatcaattaagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataaga |
212 |
Q |
| |
|
|||| ||||| ||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| ||| ||||||||||||||||||||| || | ||||| |
|
|
| T |
23884 |
tcattaattaggcaaaatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaatccatgtataag- |
23786 |
T |
 |
| Q |
213 |
aaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||| | | || | | ||||||||||||| ||| | |||||||||||||||||||||||| |
|
|
| T |
23785 |
aaacaacaacataaccagagcacgaatttgacatgagttgttcatcaacccattttcatac |
23725 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0116 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0116
Description:
Target: scaffold0116; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 272
Target Start/End: Original strand, 177 - 314
Alignment:
| Q |
133 |
cataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagag |
232 |
Q |
| |
|
||||||||| ||||| |||||| || ||||||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | |||||||||||| |
|
|
| T |
177 |
cataacttatcatttttacatattt--aaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcacagcaagag |
274 |
T |
 |
| Q |
233 |
cacgaatttaacaacaattgttcatcaacccattttcata |
272 |
Q |
| |
|
||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
275 |
cacgaatttgacatgaattgttcatcaacccattttcata |
314 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0215 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0215
Description:
Target: scaffold0215; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 130 - 273
Target Start/End: Complemental strand, 9462 - 9321
Alignment:
| Q |
130 |
tttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaa |
229 |
Q |
| |
|
||||| |||||| ||||| |||||| |||||| |||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | ||||||||| |
|
|
| T |
9462 |
tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagcaa |
9365 |
T |
 |
| Q |
230 |
gagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
9364 |
aagcacgaatttgacatgaattgttcatcaacccattttcatac |
9321 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0215; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 130 - 273
Target Start/End: Complemental strand, 16360 - 16219
Alignment:
| Q |
130 |
tttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaa |
229 |
Q |
| |
|
||||| |||||| ||||| |||||| |||||| |||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | ||||||||| |
|
|
| T |
16360 |
tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagcaa |
16263 |
T |
 |
| Q |
230 |
gagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
16262 |
aagcacgaatttgacatgaattgttcatcaacccattttcatac |
16219 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1711 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold1711
Description:
Target: scaffold1711; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 161 - 273
Target Start/End: Complemental strand, 1388 - 1276
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaa |
260 |
Q |
| |
|
|||||||||||||||| | || ||||| | | |||||||||| ||||| || ||| | |||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
1388 |
aacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaa |
1289 |
T |
 |
| Q |
261 |
cccattttcatac |
273 |
Q |
| |
|
||||||||||||| |
|
|
| T |
1288 |
cccattttcatac |
1276 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 131 - 273
Target Start/End: Complemental strand, 64640 - 64495
Alignment:
| Q |
131 |
ttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaat-----tcaagcataagaaaatagcttcaca |
225 |
Q |
| |
|
||||||||||| ||||| |||||| || ||||||||||||||||| | || ||||| || ||||||||| ||| ||||| || ||| | ||||| |
|
|
| T |
64640 |
ttcataacttatcatttttacatattt--aaacatgtaatttcaccaacaatcatacaatcatcatcaatataattcatgcatataaacataacatcaca |
64543 |
T |
 |
| Q |
226 |
gcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
64542 |
gcaagagcacgaatttgacatgaattgttcatcaacccattttcatac |
64495 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 273
Target Start/End: Original strand, 107914 - 108026
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaattgttcatcaa |
260 |
Q |
| |
|
|||||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | | |||| ||||||||||||| |||||||||||||||| |
|
|
| T |
107914 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaattgttcatcaa |
108013 |
T |
 |
| Q |
261 |
cccattttcatac |
273 |
Q |
| |
|
||||||||||||| |
|
|
| T |
108014 |
cccattttcatac |
108026 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0420 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0420
Description:
Target: scaffold0420; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 273
Target Start/End: Complemental strand, 13438 - 13297
Alignment:
| Q |
130 |
tttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaa |
229 |
Q |
| |
|
||||| |||||| ||||| |||||| |||||| |||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | ||||| || |
|
|
| T |
13438 |
tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacactaa |
13341 |
T |
 |
| Q |
230 |
gagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|||||||||| || || |||||||||||||||||||||||||| |
|
|
| T |
13340 |
gagcacgaatctagcatgaattgttcatcaacccattttcatac |
13297 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0139 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0139
Description:
Target: scaffold0139; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 131 - 273
Target Start/End: Complemental strand, 21228 - 21088
Alignment:
| Q |
131 |
ttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaag |
230 |
Q |
| |
|
||||||||||| ||||| |||||| |||||| ||||||||||||| | || |||| || |||||||||| | | ||| || ||| | ||||| |||| |
|
|
| T |
21228 |
ttcataacttatcatttttacata-tttgaa-catgtaatttcactaacaatcatataattatcatcaattaatggatacaaacataacatcacaacaag |
21131 |
T |
 |
| Q |
231 |
agcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
21130 |
agcacgaatttagcaagaattgttcatcaacccattttcatac |
21088 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0139; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 273
Target Start/End: Complemental strand, 14173 - 14034
Alignment:
| Q |
131 |
ttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaag |
230 |
Q |
| |
|
||||||||||| ||||| |||||| || ||||||||||||||| | || |||| || |||||||||||| ||||| | ||| | |||||||||| |
|
|
| T |
14173 |
ttcataacttatcatttttacatatttc--aacatgtaatttcactaacaatcatataattatcatcaattcatgcatacagacataacatcacagcaag |
14076 |
T |
 |
| Q |
231 |
agcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||| |||| ||| |||||| ||||||||||||||||||| |
|
|
| T |
14075 |
agcacga-tttagcaagaattgtgcatcaacccattttcatac |
14034 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0092 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0092
Description:
Target: scaffold0092; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 273
Target Start/End: Complemental strand, 10776 - 10724
Alignment:
| Q |
221 |
tcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||| |||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
10776 |
tcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatac |
10724 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0361 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0361
Description:
Target: scaffold0361; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 3324 - 3447
Alignment:
| Q |
128 |
aatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagc |
227 |
Q |
| |
|
||||||||||||| | ||||||||||||||||||| ||||||||||||| | || ||||| | ||||| |||||| ||||| || || | ||||||| |
|
|
| T |
3324 |
aatttcataacttgatatttatacatactttgaaatatgtaatttcaccaacaatcatacaaatatcattaattcatgcatacaaacttaacatcacagc |
3423 |
T |
 |
| Q |
228 |
aagagcacgaatttaacaacaatt |
251 |
Q |
| |
|
|||||||||||||| || ||||| |
|
|
| T |
3424 |
tagagcacgaatttagcatcaatt |
3447 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0516 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0516
Description:
Target: scaffold0516; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 12149 - 12103
Alignment:
| Q |
227 |
caagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
12149 |
caagagcacgaatttaacatcaattgttcatcaacccattttcatac |
12103 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0132 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0132
Description:
Target: scaffold0132; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 251
Target Start/End: Original strand, 13528 - 13763
Alignment:
| Q |
15 |
atacccaaatcatgattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcatttcaatcaaaacatatcaaatttc |
114 |
Q |
| |
|
|||||||| |||||||||| |||| | ||||| ||||||| ||| |||| ||| ||| ||| || |||| | ||||| | |||||| |||| ||| |
|
|
| T |
13528 |
atacccaagtcatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataattcaacaacaacatagcaaaattc |
13627 |
T |
 |
| Q |
115 |
atcaattaagcataattt-cataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaa |
213 |
Q |
| |
|
||||||| |||| ||||| || ||||| |||||| |||||| || |||||||||||||||| | || ||||| || |||||||||||| ||||| || |
|
|
| T |
13628 |
atcaattgagcacaattttcacaacttcacatttttacataattg--aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaa |
13725 |
T |
 |
| Q |
214 |
aatagcttcacagcaagagcacgaatttaacaacaatt |
251 |
Q |
| |
|
||| | ||| || |||||||||||||| |||||||| |
|
|
| T |
13726 |
cataacatcaaagttagagcacgaatttagcaacaatt |
13763 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0125 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0125
Description:
Target: scaffold0125; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 251
Target Start/End: Original strand, 41815 - 41905
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaatt |
251 |
Q |
| |
|
|||||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | |||||| ||||||||||||||||||||||| |
|
|
| T |
41815 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttaacaacaatt |
41905 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0266 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0266
Description:
Target: scaffold0266; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 3707 - 3588
Alignment:
| Q |
130 |
tttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaa |
229 |
Q |
| |
|
||||| |||||| ||||| |||||| |||||| |||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | |||||| |
|
|
| T |
3707 |
tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttg |
3610 |
T |
 |
| Q |
230 |
gagcacgaatttaacaacaatt |
251 |
Q |
| |
|
||||||||||||| |||||||| |
|
|
| T |
3609 |
gagcacgaatttagcaacaatt |
3588 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0175 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0175
Description:
Target: scaffold0175; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 251
Target Start/End: Complemental strand, 1105 - 962
Alignment:
| Q |
107 |
caaatttcatcaattaagcataattt-cataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaag |
205 |
Q |
| |
|
|||| |||||||||| |||| ||||| || |||||| |||| |||||| |||||| |||||||||||||| | || ||||| || |||||||||||| | |
|
|
| T |
1105 |
caaaattcatcaattgagcacaattttcacaacttattatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatg |
1008 |
T |
 |
| Q |
206 |
cataagaaaatagcttcacagcaagagcacgaatttaacaacaatt |
251 |
Q |
| |
|
|||| || ||| | |||||| ||||||||||||| |||||||| |
|
|
| T |
1007 |
catacaaacatatcatcacagttggagcacgaatttagcaacaatt |
962 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0077 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0077
Description:
Target: scaffold0077; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 37038 - 36919
Alignment:
| Q |
130 |
tttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaa |
229 |
Q |
| |
|
||||| |||||| ||||| |||||| |||||| |||||||||||||| | || | ||| || |||||||||||| ||||| || ||| | |||||| |
|
|
| T |
37038 |
tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaagcttacaattatcatcaattcatgcatacaaacatatcatcacagttg |
36941 |
T |
 |
| Q |
230 |
gagcacgaatttaacaacaatt |
251 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
36940 |
gagcacgaatttaacaacaatt |
36919 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0302 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0302
Description:
Target: scaffold0302; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 251
Target Start/End: Original strand, 12279 - 12370
Alignment:
| Q |
160 |
aaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaatt |
251 |
Q |
| |
|
||||||||| ||||||| | || ||||| || |||||||||||| ||||| || ||| | |||||| |||||||||||||| |||||||| |
|
|
| T |
12279 |
aaacatgtattttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttagagcacgaatttagcaacaatt |
12370 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0025 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0025
Description:
Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 251
Target Start/End: Original strand, 8934 - 9106
Alignment:
| Q |
78 |
aatcacatctcatttcaatcaaaacatatcaaatttcatcaattaagcataattt-cataacttaacatttatacatactttgaaacatgtaatttcacc |
176 |
Q |
| |
|
||||| |||||| ||||| | ||| || |||| |||| ||||| |||| ||||| || ||||| |||||| |||||| || |||||||||||||||| |
|
|
| T |
8934 |
aatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattg--aacatgtaatttcacc |
9031 |
T |
 |
| Q |
177 |
cataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaatt |
251 |
Q |
| |
|
| || ||||| || |||||||||||| ||||| || ||| | |||||| ||||||||||||| |||||||| |
|
|
| T |
9032 |
aacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagatggagcacgaatttagcaacaatt |
9106 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0025; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 148859 - 148978
Alignment:
| Q |
130 |
tttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaa |
229 |
Q |
| |
|
||||| |||||| ||||| |||||| |||||| |||||||||||||| | || | ||| || |||||||||||| ||||| || ||| | |||||| |
|
|
| T |
148859 |
tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttg |
148956 |
T |
 |
| Q |
230 |
gagcacgaatttaacaacaatt |
251 |
Q |
| |
|
|||||| ||||||||||||||| |
|
|
| T |
148957 |
gagcacaaatttaacaacaatt |
148978 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1542 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1542
Description:
Target: scaffold1542; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 251
Target Start/End: Complemental strand, 630 - 540
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaatt |
251 |
Q |
| |
|
|||||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | |||||| ||||||||||||| |||||||| |
|
|
| T |
630 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaatt |
540 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0413 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0413
Description:
Target: scaffold0413; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 251
Target Start/End: Complemental strand, 6160 - 6070
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaatt |
251 |
Q |
| |
|
|||||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | |||||| ||||||||||||| |||||||| |
|
|
| T |
6160 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaatt |
6070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0075 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0075
Description:
Target: scaffold0075; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 251
Target Start/End: Complemental strand, 34556 - 34466
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaatt |
251 |
Q |
| |
|
|||||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | |||||| |||||||||||||| ||| |||| |
|
|
| T |
34556 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaataatt |
34466 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0028
Description:
Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 251
Target Start/End: Complemental strand, 89550 - 89460
Alignment:
| Q |
161 |
aacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaatt |
251 |
Q |
| |
|
|||||||||||||||| | || ||||| || |||||||||||| ||||| || ||| | |||||| ||||||||||||| |||||||| |
|
|
| T |
89550 |
aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaatatatcatcacagttggagcacgaatttagcaacaatt |
89460 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0008
Description:
Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 31693 - 31647
Alignment:
| Q |
227 |
caagagcacgaatttaacaacaattgttcatcaacccattttcatac |
273 |
Q |
| |
|
|||||||||||||||| || |||||||||||||| ||||||||||| |
|
|
| T |
31693 |
caagagcacgaatttagcatgaattgttcatcaactcattttcatac |
31647 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0195 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0195
Description:
Target: scaffold0195; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 19344 - 19463
Alignment:
| Q |
130 |
tttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaa |
229 |
Q |
| |
|
||||| |||||| ||||| |||||| |||||| |||||||||||||| | || | ||| || |||||||||||| ||||| || ||| | |||||| |
|
|
| T |
19344 |
tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttg |
19441 |
T |
 |
| Q |
230 |
gagcacgaatttaacaacaatt |
251 |
Q |
| |
|
||||||||||||| |||||||| |
|
|
| T |
19442 |
gagcacgaatttagcaacaatt |
19463 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0195; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 21428 - 21547
Alignment:
| Q |
130 |
tttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcaagcataagaaaatagcttcacagcaa |
229 |
Q |
| |
|
||||| |||||| ||||| |||||| |||||| |||||||||||||| | || | ||| || |||||||||||| ||||| || ||| | |||||| |
|
|
| T |
21428 |
tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttg |
21525 |
T |
 |
| Q |
230 |
gagcacgaatttaacaacaatt |
251 |
Q |
| |
|
||||||||||||| |||||||| |
|
|
| T |
21526 |
gagcacgaatttagcaacaatt |
21547 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0162 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0162
Description:
Target: scaffold0162; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 251
Target Start/End: Complemental strand, 8336 - 8186
Alignment:
| Q |
100 |
aacatatcaaatttcatcaattaagcataattt-cataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatca |
198 |
Q |
| |
|
|||||| |||| |||| ||||| |||| ||||| || ||||| |||||| |||||| || ||| |||||||||||| | || ||||| || |||| || |
|
|
| T |
8336 |
aacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattg--aacctgtaatttcaccaacaatcatacaattatcacca |
8239 |
T |
 |
| Q |
199 |
attcaagcataagaaaatagcttcacagcaagagcacgaatttaacaacaatt |
251 |
Q |
| |
|
||||| ||||| || ||| | |||||| |||||||||||||| |||||||| |
|
|
| T |
8238 |
attcatgcatacaaacataacatcacagttagagcacgaatttagcaacaatt |
8186 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University