View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21667_high_22 (Length: 312)
Name: NF21667_high_22
Description: NF21667
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21667_high_22 |
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Alignment Details
Target: chr7 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 48167490 - 48167772
Alignment:
| Q |
1 |
tatagagggttgtgttgtccatagagatatcaaggtaagtgtgatgaagttaatctggaatggattctgcacttaattgggaatgattagaaaatgtttt |
100 |
Q |
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| T |
48167490 |
tatagagggttgtgttgtccatagagatatcaaggtaagtgtgatgaagttaatctggaatggattctgcacttaattgggaatgattagaaaatgtttt |
48167589 |
T |
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| Q |
101 |
cttaatgccttgtattgattttattgtttagcttacaaacattcttttgactgagaaatatgaagccaaactgtcggattttggattgtcaaggatgatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48167590 |
cttaatgccttgtattgattttattgtttagcttacaaacattcttttgactgagaaatatgaagccaaactgtcggattttggattgtcaaggatgatg |
48167689 |
T |
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| Q |
201 |
ggcatggaagagagcaaggtttttactgatgttagaggaactataggttacatggatccagagtacatgagtaatgccaagtt |
283 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48167690 |
ggcatggaagagagcaaggtttttactgatgttagaggaactataggttacatggatccagagtacatgagtaatgccaagtt |
48167772 |
T |
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