View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21668_high_12 (Length: 342)

Name: NF21668_high_12
Description: NF21668
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21668_high_12
NF21668_high_12
[»] scaffold0061 (2 HSPs)
scaffold0061 (1-77)||(68514-68590)
scaffold0061 (292-334)||(68328-68371)
[»] chr8 (25 HSPs)
chr8 (1-77)||(21974142-21974218)
chr8 (1-77)||(21978252-21978328)
chr8 (1-77)||(43250246-43250322)
chr8 (1-75)||(14399053-14399127)
chr8 (1-75)||(21409945-21410019)
chr8 (1-75)||(21804437-21804511)
chr8 (1-78)||(23427870-23427945)
chr8 (1-78)||(23913309-23913384)
chr8 (1-78)||(44385793-44385868)
chr8 (1-79)||(21386203-21386279)
chr8 (35-77)||(21829430-21829472)
chr8 (292-336)||(18863811-18863856)
chr8 (292-336)||(30941271-30941316)
chr8 (291-334)||(21973689-21973733)
chr8 (291-334)||(21977780-21977824)
chr8 (291-334)||(22110965-22111009)
chr8 (291-334)||(43250725-43250769)
chr8 (292-334)||(21829139-21829182)
chr8 (35-77)||(22110668-22110710)
chr8 (35-75)||(18864076-18864116)
chr8 (35-75)||(30941536-30941576)
chr8 (1-31)||(18864109-18864139)
chr8 (1-31)||(21829465-21829495)
chr8 (1-31)||(22110645-22110675)
chr8 (1-31)||(30941569-30941599)
[»] chr7 (44 HSPs)
chr7 (1-77)||(31769-31845)
chr7 (1-77)||(12706081-12706157)
chr7 (1-77)||(12713584-12713660)
chr7 (1-77)||(12717331-12717407)
chr7 (1-77)||(12722242-12722318)
chr7 (1-77)||(16908468-16908544)
chr7 (1-77)||(18278038-18278114)
chr7 (1-77)||(18282002-18282078)
chr7 (1-75)||(2833442-2833516)
chr7 (1-75)||(15083270-15083344)
chr7 (1-75)||(39721240-39721314)
chr7 (1-78)||(25928330-25928406)
chr7 (1-75)||(2531293-2531367)
chr7 (1-75)||(7520176-7520250)
chr7 (1-78)||(20486786-20486861)
chr7 (1-78)||(10607280-10607355)
chr7 (1-54)||(26291201-26291254)
chr7 (1-79)||(9752466-9752542)
chr7 (1-79)||(18301395-18301471)
chr7 (1-78)||(16582465-16582540)
chr7 (1-79)||(1859979-1860056)
chr7 (1-79)||(13919370-13919447)
chr7 (1-48)||(39268301-39268348)
chr7 (35-77)||(72341-72383)
chr7 (35-77)||(76450-76492)
chr7 (292-336)||(45171207-45171252)
chr7 (291-334)||(32023-32067)
chr7 (1-45)||(11660326-11660370)
chr7 (291-334)||(12713838-12713882)
chr7 (291-334)||(12717662-12717706)
chr7 (291-334)||(12722573-12722617)
chr7 (1-45)||(13891674-13891718)
chr7 (291-334)||(18278357-18278401)
chr7 (291-334)||(18282320-18282364)
chr7 (292-334)||(71970-72013)
chr7 (292-334)||(76079-76122)
chr7 (1-41)||(13892057-13892097)
chr7 (35-75)||(45171472-45171512)
chr7 (1-43)||(18424279-18424321)
chr7 (1-31)||(45171505-45171535)
chr7 (1-45)||(14420831-14420875)
chr7 (1-45)||(16005048-16005092)
chr7 (1-45)||(18606382-18606426)
chr7 (1-45)||(18871341-18871385)
[»] chr6 (41 HSPs)
chr6 (1-77)||(8242456-8242532)
chr6 (1-77)||(11565445-11565521)
chr6 (1-77)||(12620292-12620368)
chr6 (1-77)||(22861799-22861875)
chr6 (1-77)||(23988347-23988423)
chr6 (1-78)||(11716898-11716975)
chr6 (1-63)||(27555583-27555645)
chr6 (1-75)||(22075347-22075425)
chr6 (3-78)||(2076332-2076405)
chr6 (1-54)||(23400722-23400775)
chr6 (1-79)||(18918539-18918615)
chr6 (1-79)||(14470925-14471001)
chr6 (35-77)||(22947734-22947776)
chr6 (35-77)||(22951690-22951732)
chr6 (35-77)||(23870178-23870220)
chr6 (35-77)||(23874134-23874176)
chr6 (1-54)||(18953465-18953518)
chr6 (292-336)||(19869514-19869559)
chr6 (292-336)||(23393968-23394013)
chr6 (292-336)||(23413876-23413921)
chr6 (291-334)||(8242788-8242832)
chr6 (291-334)||(11565776-11565820)
chr6 (291-334)||(12619990-12620034)
chr6 (291-334)||(23988874-23988918)
chr6 (292-334)||(16759152-16759195)
chr6 (291-333)||(22948031-22948074)
chr6 (291-333)||(22951987-22952030)
chr6 (291-333)||(23870475-23870518)
chr6 (291-333)||(23874431-23874474)
chr6 (26-79)||(1643321-1643372)
chr6 (35-77)||(16758782-16758824)
chr6 (35-75)||(19869254-19869294)
chr6 (35-75)||(23393708-23393748)
chr6 (35-75)||(23413616-23413656)
chr6 (1-31)||(19869231-19869261)
chr6 (1-31)||(23393685-23393715)
chr6 (1-31)||(23413593-23413623)
chr6 (292-336)||(14471255-14471300)
chr6 (1-45)||(23538025-23538069)
chr6 (1-45)||(27222876-27222920)
chr6 (3-43)||(31479455-31479495)
[»] chr5 (37 HSPs)
chr5 (1-77)||(19474131-19474207)
chr5 (1-77)||(20294558-20294634)
chr5 (1-75)||(18354841-18354915)
chr5 (2-66)||(24768532-24768596)
chr5 (1-79)||(20912211-20912287)
chr5 (1-79)||(15238076-15238152)
chr5 (1-78)||(22108409-22108484)
chr5 (1-79)||(40727358-40727434)
chr5 (1-78)||(22120551-22120626)
chr5 (291-336)||(19473830-19473876)
chr5 (292-336)||(11219882-11219927)
chr5 (292-336)||(11224468-11224513)
chr5 (292-336)||(11226448-11226493)
chr5 (292-336)||(11230280-11230325)
chr5 (292-336)||(18355189-18355234)
chr5 (291-334)||(20294815-20294859)
chr5 (292-334)||(40727069-40727112)
chr5 (35-75)||(11219622-11219662)
chr5 (35-75)||(11224208-11224248)
chr5 (35-75)||(11226224-11226264)
chr5 (35-75)||(11228030-11228070)
chr5 (35-75)||(11230020-11230060)
chr5 (292-330)||(11228290-11228329)
chr5 (1-43)||(10751861-10751903)
chr5 (1-31)||(11219599-11219629)
chr5 (1-31)||(11224185-11224215)
chr5 (1-31)||(11226201-11226231)
chr5 (1-31)||(11228007-11228037)
chr5 (1-31)||(11229997-11230027)
chr5 (1-45)||(19510506-19510550)
chr5 (1-45)||(22339056-22339100)
chr5 (1-45)||(23113393-23113437)
chr5 (1-45)||(28372072-28372116)
chr5 (1-45)||(37599999-37600043)
chr5 (1-45)||(38146409-38146453)
chr5 (6-42)||(39362991-39363027)
chr5 (1-45)||(41878642-41878686)
[»] chr4 (35 HSPs)
chr4 (1-77)||(9555113-9555189)
chr4 (1-77)||(14758950-14759026)
chr4 (1-77)||(14955718-14955794)
chr4 (1-77)||(17807098-17807174)
chr4 (1-77)||(25688486-25688562)
chr4 (1-77)||(4562732-4562808)
chr4 (1-77)||(5758414-5758490)
chr4 (1-77)||(33740880-33740956)
chr4 (1-75)||(20158408-20158482)
chr4 (1-75)||(20161084-20161158)
chr4 (1-75)||(20163859-20163933)
chr4 (1-77)||(12486315-12486388)
chr4 (1-79)||(23996925-23997001)
chr4 (1-75)||(10711869-10711943)
chr4 (1-75)||(10925639-10925713)
chr4 (1-78)||(12422987-12423062)
chr4 (1-78)||(17052405-17052480)
chr4 (1-79)||(631706-631782)
chr4 (1-79)||(22634885-22634961)
chr4 (1-79)||(27532796-27532872)
chr4 (1-48)||(13813820-13813867)
chr4 (1-48)||(13818308-13818355)
chr4 (292-336)||(12486570-12486615)
chr4 (291-334)||(4562433-4562477)
chr4 (291-334)||(9555444-9555488)
chr4 (291-334)||(14758574-14758618)
chr4 (291-334)||(14955339-14955383)
chr4 (1-45)||(24048375-24048419)
chr4 (291-334)||(33741214-33741258)
chr4 (292-334)||(5757958-5758001)
chr4 (291-333)||(25688817-25688860)
chr4 (1-43)||(15223590-15223632)
chr4 (1-45)||(15533263-15533307)
chr4 (1-45)||(18211648-18211692)
chr4 (1-45)||(49549073-49549117)
[»] chr3 (58 HSPs)
chr3 (1-77)||(7108282-7108358)
chr3 (1-77)||(7112217-7112293)
chr3 (1-77)||(11068657-11068733)
chr3 (1-77)||(15616221-15616297)
chr3 (1-77)||(22320173-22320249)
chr3 (1-77)||(22335228-22335304)
chr3 (1-77)||(55021420-55021496)
chr3 (1-77)||(11167052-11167128)
chr3 (1-77)||(14497991-14498067)
chr3 (1-77)||(28948505-28948581)
chr3 (1-75)||(5219891-5219965)
chr3 (1-75)||(11853750-11853824)
chr3 (1-75)||(37440641-37440715)
chr3 (1-75)||(11301626-11301700)
chr3 (1-75)||(14664469-14664543)
chr3 (1-75)||(14667633-14667707)
chr3 (1-78)||(16795547-16795622)
chr3 (1-54)||(18933337-18933390)
chr3 (1-54)||(30064429-30064482)
chr3 (1-76)||(12853325-12853398)
chr3 (1-79)||(4590119-4590195)
chr3 (3-79)||(14068021-14068095)
chr3 (1-78)||(14670070-14670142)
chr3 (1-79)||(15463922-15463999)
chr3 (1-51)||(12337300-12337348)
chr3 (1-79)||(17318468-17318544)
chr3 (35-77)||(4112607-4112649)
chr3 (291-336)||(11069065-11069111)
chr3 (35-76)||(4108759-4108800)
chr3 (292-336)||(15963824-15963869)
chr3 (292-336)||(15967748-15967793)
chr3 (292-336)||(15971672-15971717)
chr3 (291-334)||(7108613-7108657)
chr3 (291-334)||(7112548-7112592)
chr3 (291-334)||(11166676-11166720)
chr3 (291-334)||(14498322-14498366)
chr3 (291-334)||(15616552-15616596)
chr3 (291-334)||(22320581-22320625)
chr3 (291-334)||(22335636-22335680)
chr3 (291-334)||(28948759-28948803)
chr3 (291-334)||(30064764-30064808)
chr3 (291-334)||(55021902-55021946)
chr3 (292-334)||(4108387-4108430)
chr3 (292-334)||(4112239-4112282)
chr3 (291-336)||(14067672-14067718)
chr3 (1-42)||(10834935-10834976)
chr3 (1-45)||(8928858-8928902)
chr3 (1-45)||(13435862-13435906)
chr3 (35-75)||(15963564-15963604)
chr3 (35-75)||(15967488-15967528)
chr3 (35-75)||(15971412-15971452)
chr3 (1-78)||(14681594-14681664)
chr3 (1-42)||(16751895-16751936)
chr3 (1-45)||(3802014-3802058)
chr3 (1-45)||(14764786-14764830)
chr3 (1-45)||(20249840-20249884)
chr3 (1-45)||(29545929-29545973)
chr3 (1-45)||(54519641-54519685)
[»] chr2 (27 HSPs)
chr2 (1-77)||(24630006-24630082)
chr2 (1-77)||(24645195-24645271)
chr2 (1-77)||(24647971-24648047)
chr2 (1-77)||(27600415-27600491)
chr2 (1-77)||(30346616-30346692)
chr2 (1-77)||(10103255-10103331)
chr2 (1-77)||(12902565-12902641)
chr2 (1-77)||(27380952-27381028)
chr2 (1-77)||(27384922-27384998)
chr2 (1-75)||(31343961-31344035)
chr2 (1-78)||(9784038-9784113)
chr2 (292-336)||(41532149-41532194)
chr2 (291-334)||(10102956-10103000)
chr2 (291-334)||(24629627-24629671)
chr2 (291-334)||(27380500-27380544)
chr2 (291-334)||(27384546-27384590)
chr2 (291-334)||(27600746-27600790)
chr2 (291-334)||(30346163-30346207)
chr2 (292-336)||(1282351-1282396)
chr2 (35-75)||(41532414-41532454)
chr2 (1-31)||(41532447-41532477)
chr2 (1-45)||(6481828-6481872)
chr2 (1-45)||(6485295-6485339)
chr2 (1-45)||(19663548-19663592)
chr2 (1-45)||(20260301-20260345)
chr2 (1-45)||(21074498-21074542)
chr2 (1-29)||(24647138-24647166)
[»] chr1 (20 HSPs)
chr1 (1-77)||(1009306-1009382)
chr1 (1-77)||(1926754-1926830)
chr1 (1-77)||(16376774-16376850)
chr1 (1-77)||(20925768-20925844)
chr1 (1-77)||(52634312-52634388)
chr1 (1-75)||(33796077-33796151)
chr1 (1-78)||(22132058-22132133)
chr1 (1-54)||(20230120-20230173)
chr1 (1-79)||(21406297-21406373)
chr1 (1-78)||(41801238-41801313)
chr1 (291-334)||(1009637-1009681)
chr1 (291-334)||(1926301-1926345)
chr1 (291-334)||(16376552-16376596)
chr1 (291-334)||(20925315-20925359)
chr1 (291-334)||(52634723-52634767)
chr1 (296-336)||(33796462-33796503)
chr1 (1-43)||(39245163-39245205)
chr1 (1-43)||(39248718-39248760)
chr1 (1-43)||(41389657-41389699)
chr1 (1-45)||(16370969-16371013)
[»] scaffold0372 (2 HSPs)
scaffold0372 (1-77)||(6279-6355)
scaffold0372 (291-334)||(6167-6211)
[»] scaffold0349 (2 HSPs)
scaffold0349 (1-66)||(11095-11160)
scaffold0349 (291-334)||(11431-11475)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-77)||(60283-60360)
[»] scaffold0166 (1 HSPs)
scaffold0166 (2-66)||(11029-11093)
[»] scaffold1852 (1 HSPs)
scaffold1852 (1-75)||(781-855)
[»] scaffold0410 (1 HSPs)
scaffold0410 (1-75)||(14888-14962)
[»] scaffold0486 (1 HSPs)
scaffold0486 (1-65)||(8621-8685)
[»] scaffold0157 (2 HSPs)
scaffold0157 (1-77)||(34089-34162)
scaffold0157 (292-336)||(33862-33907)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-75)||(11821-11895)
[»] scaffold0293 (1 HSPs)
scaffold0293 (1-78)||(21298-21374)
[»] scaffold0575 (1 HSPs)
scaffold0575 (1-78)||(6920-6995)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-79)||(25526-25602)
[»] scaffold0142 (1 HSPs)
scaffold0142 (2-78)||(8699-8773)
[»] scaffold0380 (1 HSPs)
scaffold0380 (1-79)||(4018-4094)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1-78)||(74291-74366)
[»] scaffold0109 (1 HSPs)
scaffold0109 (1-54)||(37179-37232)
[»] scaffold0029 (2 HSPs)
scaffold0029 (1-54)||(62821-62874)
scaffold0029 (291-336)||(79489-79535)
[»] scaffold0299 (1 HSPs)
scaffold0299 (1-51)||(5869-5917)
[»] scaffold0327 (1 HSPs)
scaffold0327 (1-78)||(18867-18942)
[»] scaffold0141 (3 HSPs)
scaffold0141 (292-336)||(15281-15326)
scaffold0141 (35-75)||(15546-15586)
scaffold0141 (1-31)||(15579-15609)
[»] scaffold0080 (2 HSPs)
scaffold0080 (1-45)||(28516-28560)
scaffold0080 (1-45)||(33981-34025)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-78)||(37161-37237)
[»] scaffold0525 (2 HSPs)
scaffold0525 (1-54)||(5512-5565)
scaffold0525 (292-334)||(5006-5049)
[»] scaffold0200 (1 HSPs)
scaffold0200 (35-75)||(10834-10874)
[»] scaffold1873 (1 HSPs)
scaffold1873 (16-79)||(691-753)
[»] scaffold0001 (1 HSPs)
scaffold0001 (8-45)||(153803-153840)
[»] scaffold1427 (1 HSPs)
scaffold1427 (1-45)||(244-288)
[»] scaffold0842 (1 HSPs)
scaffold0842 (1-45)||(5286-5330)
[»] scaffold0337 (1 HSPs)
scaffold0337 (1-45)||(10812-10856)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-45)||(109645-109689)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-45)||(224133-224177)


Alignment Details
Target: scaffold0061 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 68590 - 68514
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  68590 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 68514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 334
Target Start/End: Complemental strand, 68371 - 68328
Alignment:
Q  292 tattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  68371 tattcatcatcttatgaaaatataatcaacacatactaacacca 68328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 3e-33; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 21974218 - 21974142
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21974218 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 21974142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 21978328 - 21978252
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21978328 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 21978252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 43250246 - 43250322
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  43250246 agtacacttaacaactcatagatatcatcatgtaatcatcatcattaataactttaaaacaacacaatataatcatc 43250322  T

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Target: chr8; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 14399127 - 14399053
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  14399127 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14399053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 21409945 - 21410019
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  21409945 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 21410019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 21804437 - 21804511
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  21804437 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 21804511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 23427870 - 23427945
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||  | |||||||| |||||||||||    
T  23427870 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--agacaacacaatataatcatca 23427945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 23913309 - 23913384
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatca 78  Q
    |||||| ||||||||| ||||||| |||||||||||||||||||||||||||||  |||||||||| |||||||||||    
T  23913309 agtacatttaacaacttatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 23913384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 44385868 - 44385793
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatca 78  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||| |||||  |||||||||| |||||||||||    
T  44385868 agtacatttaacaactcatagataacatcatgtaatcatcatcactaacaactt--aaacaacacaatataatcatca 44385793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 21386203 - 21386279
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatcac 79  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||||||  |||| ||||| ||||||||||||    
T  21386203 agtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatcatcac 21386279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 77
Target Start/End: Complemental strand, 21829472 - 21829430
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  21829472 atcatcatcactaataactttaaaacaacacaatataatcatc 21829430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 18863856 - 18863811
Alignment:
Q  292 tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  18863856 tattcatcatcttatcaaaatataatcaacacatactaacaccata 18863811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 30941316 - 30941271
Alignment:
Q  292 tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  30941316 tattcatcatcttatcaaaatataatcaacacatactaacaccata 30941271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Complemental strand, 21973733 - 21973689
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  21973733 gtattcatcatcttatgaaaatataatcaacacatactaacacca 21973689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Complemental strand, 21977824 - 21977780
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  21977824 gtattcatcatcttatgaaaatataatcaacacatactaacacca 21977780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 22110965 - 22111009
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  22110965 gtattcatcatcttatgaaaatataatcaacacatactaacacca 22111009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 43250725 - 43250769
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  43250725 gtattcatcatcttatgaaaatataatcaacacatactaacacca 43250769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 334
Target Start/End: Complemental strand, 21829182 - 21829139
Alignment:
Q  292 tattcatcatcttataaaa-tataatcaacacatactaacacca 334  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  21829182 tattcatcatcttataaaaatataatcaacacatactaacacca 21829139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 22110668 - 22110710
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||| | ||||||||||    
T  22110668 atcatcatcactaataactttaaaacaacataatataatcatc 22110710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 18864116 - 18864076
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  18864116 atcatcatcactaataactttaaaacaacacaatgtaatca 18864076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 30941576 - 30941536
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  30941576 atcatcatcactaataactttaaaacaacacaatgtaatca 30941536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 18864139 - 18864109
Alignment:
Q  1 agtacacttaacaactcatagatatcatcat 31  Q
    |||||||||||||||||||||||||||||||    
T  18864139 agtacacttaacaactcatagatatcatcat 18864109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 21829495 - 21829465
Alignment:
Q  1 agtacacttaacaactcatagatatcatcat 31  Q
    |||||||||||||||||||||||||||||||    
T  21829495 agtacacttaacaactcatagatatcatcat 21829465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 22110645 - 22110675
Alignment:
Q  1 agtacacttaacaactcatagatatcatcat 31  Q
    |||||||||||||||||||||||||||||||    
T  22110645 agtacacttaacaactcatagatatcatcat 22110675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 30941599 - 30941569
Alignment:
Q  1 agtacacttaacaactcatagatatcatcat 31  Q
    |||||||||||||||||||||||||||||||    
T  30941599 agtacacttaacaactcatagatatcatcat 30941569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 3e-33; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 31769 - 31845
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31769 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 31845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 12706157 - 12706081
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12706157 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12706081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 12713584 - 12713660
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12713584 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12713660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 12717331 - 12717407
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12717331 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12717407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 12722242 - 12722318
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12722242 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12722318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 16908544 - 16908468
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16908544 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 16908468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 18278038 - 18278114
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  18278038 agtacacttaacaactcatagatatcatcatgcaatcatcatcactaataactttaaaacaacacaatataatcatc 18278114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 18282002 - 18282078
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  18282002 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaaaaactttaaaacaacacaatataatcatc 18282078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 2833516 - 2833442
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  2833516 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 2833442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 15083270 - 15083344
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  15083270 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 15083344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 39721240 - 39721314
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||    
T  39721240 agtacatttaacaactcatagatatcatcatgtaatcatcattactaataactttaaaacaacacaatgtaatca 39721314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 25928406 - 25928330
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  25928406 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataacttt-aaacaacacaatataatcatca 25928330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 2531367 - 2531293
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatca 75  Q
    ||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| | ||||||    
T  2531367 agtacacctaacaactcatagatatcttcatataatcatcatcactaataactttaaaacaacacaatgtaatca 2531293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 7520250 - 7520176
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| | ||||||    
T  7520250 agtacatttaacaactcatagataacatcatgtaatcatcatcactgataactttaaaacaacacaatgtaatca 7520176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 20486786 - 20486861
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||| |||||||||||    
T  20486786 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 20486861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10607355 - 10607280
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||| ||  |||||||||| |||||||||||    
T  10607355 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcatca 10607280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26291201 - 26291254
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26291201 agtacacttaacaactcatagataacatcatgtaatcatcatcactaataactt 26291254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 9752542 - 9752466
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatcac 79  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||||||||||||  |||||||||| ||| ||||||||    
T  9752542 agtacatttaacaactcatagataacatcatgtaattatcatcactaataactt--aaacaacacaatatgatcatcac 9752466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 18301395 - 18301471
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatcac 79  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||||||  |||||||||| ||||||| ||||    
T  18301395 agtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcgtcac 18301471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16582465 - 16582540
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatca 78  Q
    |||||| ||||||||||||| ||| |||||||||||||||||||||||||| ||  |||||||||| |||||||||||    
T  16582465 agtacatttaacaactcataaataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcatca 16582540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 1860056 - 1859979
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatc-atcactaataactttaaaacaacacagtataatcatcac 79  Q
    |||||| ||||||||||||| ||| |||| |||||||||| ||||||||||||||  |||||||||| ||||||||||||    
T  1860056 agtacatttaacaactcatatataacatcctgtaatcatcaatcactaataactt--aaacaacacaatataatcatcac 1859979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13919447 - 13919370
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatc-atcactaataactttaaaacaacacagtataatcatcac 79  Q
    |||||| ||||||||||||| ||| |||| |||||||||| ||||||||||||||  |||||||||| ||||||||||||    
T  13919447 agtacatttaacaactcatatataacatcctgtaatcatcaatcactaataactt--aaacaacacaatataatcatcac 13919370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 39268348 - 39268301
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaa 48  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||    
T  39268348 agtacatttaacaactcatagataacatcatgtaatcatcatcactaa 39268301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 77
Target Start/End: Complemental strand, 72383 - 72341
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  72383 atcatcatcactaataactttaaaacaacacaatataatcatc 72341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 77
Target Start/End: Complemental strand, 76492 - 76450
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  76492 atcatcatcactaataactttaaaacaacacaatataatcatc 76450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 45171252 - 45171207
Alignment:
Q  292 tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  45171252 tattcatcatcttatcaaaatataatcaacacatactaacaccata 45171207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 32023 - 32067
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  32023 gtattcatcatcttatgaaaatataatcaacacatactaacacca 32067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 11660326 - 11660370
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||    
T  11660326 agtacatttaacaactcatagataacatcatgtaatcatcatcac 11660370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 12713838 - 12713882
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  12713838 gtattcatcatcttatgaaaatataatcaacacatactaacacca 12713882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 12717662 - 12717706
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  12717662 gtattcatcatcttatgaaaatataatcaacacatactaacacca 12717706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 12722573 - 12722617
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  12722573 gtattcatcatcttatgaaaatataatcaacacatactaacacca 12722617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 13891674 - 13891718
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||    
T  13891674 agtacatttaacaactcatagataacatcatgtaatcatcatcac 13891718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 18278357 - 18278401
Alignment:
Q  291 gtattcatcatcttata-aaatataatcaacacatactaacacca 334  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  18278357 gtattcatcatcttatataaatataatcaacacatactaacacca 18278401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 18282320 - 18282364
Alignment:
Q  291 gtattcatcatcttata-aaatataatcaacacatactaacacca 334  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  18282320 gtattcatcatcttatataaatataatcaacacatactaacacca 18282364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 334
Target Start/End: Complemental strand, 72013 - 71970
Alignment:
Q  292 tattcatcatcttataaaa-tataatcaacacatactaacacca 334  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  72013 tattcatcatcttataaaaatataatcaacacatactaacacca 71970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 334
Target Start/End: Complemental strand, 76122 - 76079
Alignment:
Q  292 tattcatcatcttataaaa-tataatcaacacatactaacacca 334  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  76122 tattcatcatcttataaaaatataatcaacacatactaacacca 76079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 13892057 - 13892097
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatca 41  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
T  13892057 agtacatttaacaactcatagataacatcatgtaatcatca 13892097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 45171512 - 45171472
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  45171512 atcatcatcactaataactttaaaacaacacaatgtaatca 45171472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 18424279 - 18424321
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatc 43  Q
    |||||| |||||||||||||||||  |||||||||||||||||    
T  18424279 agtacatttaacaactcatagataatatcatgtaatcatcatc 18424321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 45171535 - 45171505
Alignment:
Q  1 agtacacttaacaactcatagatatcatcat 31  Q
    |||||||||||||||||||||||||||||||    
T  45171535 agtacacttaacaactcatagatatcatcat 45171505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 14420831 - 14420875
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  14420831 agtacatttaacaactcatagataacatcacataatcatcatcac 14420875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 16005048 - 16005092
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  16005048 agtacatttaacaactcatagataacatcacataatcatcatcac 16005092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 18606382 - 18606426
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  18606382 agtacatttaacaactcatagataacatcacataatcatcatcac 18606426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 18871341 - 18871385
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  18871341 agtacatttaacaactcatagataacatcacataatcatcatcac 18871385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 3e-33; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 8242456 - 8242532
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8242456 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 8242532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 11565445 - 11565521
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11565445 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 11565521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 12620368 - 12620292
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12620368 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12620292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 22861799 - 22861875
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22861799 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 22861875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 23988347 - 23988423
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23988347 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 23988423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 11716975 - 11716898
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatca 78  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||    
T  11716975 agtacacttaacaactcatagatatcatcatgtaatcatcatcattaataactttaaaacaacacaatataaacatca 11716898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 27555583 - 27555645
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaac 63  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27555583 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaac 27555645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 22075425 - 22075347
Alignment:
Q  1 agtacacttaacaactcatagatat----catcatgtaatcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  22075425 agtacacttaacaactcatagatatatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 22075347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 2076332 - 2076405
Alignment:
Q  3 tacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatca 78  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||| |||||||||||    
T  2076332 tacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 2076405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23400722 - 23400775
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 54  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  23400722 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt 23400775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 18918615 - 18918539
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatcac 79  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||||||  |||| | ||| ||||||||||||    
T  18918615 agtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaactatacaatataatcatcac 18918539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 14470925 - 14471001
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatcac 79  Q
    ||||||| |||||||||||| ||||| |||| ||||| ||||||||||||||||  |||| ||||| ||||||||||||    
T  14470925 agtacacctaacaactcataaatatcttcatataatcttcatcactaataactt--aaactacacaatataatcatcac 14471001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 22947734 - 22947776
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  22947734 atcatcatcactaataactttaaaacaacacaatataatcatc 22947776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 22951690 - 22951732
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  22951690 atcatcatcactaataactttaaaacaacacaatataatcatc 22951732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 23870178 - 23870220
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  23870178 atcatcatcactaataactttaaaacaacacaatataatcatc 23870220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 23874134 - 23874176
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  23874134 atcatcatcactaataactttaaaacaacacaatataatcatc 23874176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18953518 - 18953465
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 54  Q
    |||||| |||||||||| |||||  |||||||||||||||||||||||||||||    
T  18953518 agtacatttaacaactcctagatgacatcatgtaatcatcatcactaataactt 18953465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 19869514 - 19869559
Alignment:
Q  292 tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  19869514 tattcatcatcttatcaaaatataatcaacacatactaacaccata 19869559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 23393968 - 23394013
Alignment:
Q  292 tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  23393968 tattcatcatcttatcaaaatataatcaacacatactaacaccata 23394013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 23413876 - 23413921
Alignment:
Q  292 tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  23413876 tattcatcatcttatcaaaatataatcaacacatactaacaccata 23413921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 8242788 - 8242832
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  8242788 gtattcatcatcttatgaaaatataatcaacacatactaacacca 8242832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 11565776 - 11565820
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  11565776 gtattcatcatcttatgaaaatataatcaacacatactaacacca 11565820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Complemental strand, 12620034 - 12619990
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  12620034 gtattcatcatcttatgaaaatataatcaacacatactaacacca 12619990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 23988874 - 23988918
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  23988874 gtattcatcatcttatgaaaatataatcaacacatactaacacca 23988918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 334
Target Start/End: Original strand, 16759152 - 16759195
Alignment:
Q  292 tattcatcatcttataaaa-tataatcaacacatactaacacca 334  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  16759152 tattcatcatcttataaaaatataatcaacacatactaacacca 16759195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 333
Target Start/End: Original strand, 22948031 - 22948074
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacc 333  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  22948031 gtattcatcatcttatgaaaatataatcaacacatactaacacc 22948074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 333
Target Start/End: Original strand, 22951987 - 22952030
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacc 333  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  22951987 gtattcatcatcttatgaaaatataatcaacacatactaacacc 22952030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 333
Target Start/End: Original strand, 23870475 - 23870518
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacc 333  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  23870475 gtattcatcatcttatgaaaatataatcaacacatactaacacc 23870518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 333
Target Start/End: Original strand, 23874431 - 23874474
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacc 333  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  23874431 gtattcatcatcttatgaaaatataatcaacacatactaacacc 23874474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 1643321 - 1643372
Alignment:
Q  26 catcatgtaatcatcatcactaataactttaaaacaacacagtataatcatcac 79  Q
    |||||||||||||||||||||||||||||  |||| ||||| ||||||||||||    
T  1643321 catcatgtaatcatcatcactaataactt--aaactacacaatataatcatcac 1643372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 16758782 - 16758824
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    ||||||||||||||||| |||||||||||||| ||||||||||    
T  16758782 atcatcatcactaataaatttaaaacaacacaatataatcatc 16758824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 19869254 - 19869294
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  19869254 atcatcatcactaataactttaaaacaacacaatgtaatca 19869294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 23393708 - 23393748
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  23393708 atcatcatcactaataactttaaaacaacacaatgtaatca 23393748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 23413616 - 23413656
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  23413616 atcatcatcactaataactttaaaacaacacaatgtaatca 23413656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 19869231 - 19869261
Alignment:
Q  1 agtacacttaacaactcatagatatcatcat 31  Q
    |||||||||||||||||||||||||||||||    
T  19869231 agtacacttaacaactcatagatatcatcat 19869261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 23393685 - 23393715
Alignment:
Q  1 agtacacttaacaactcatagatatcatcat 31  Q
    |||||||||||||||||||||||||||||||    
T  23393685 agtacacttaacaactcatagatatcatcat 23393715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 23413593 - 23413623
Alignment:
Q  1 agtacacttaacaactcatagatatcatcat 31  Q
    |||||||||||||||||||||||||||||||    
T  23413593 agtacacttaacaactcatagatatcatcat 23413623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 14471255 - 14471300
Alignment:
Q  292 tattcatcatcttataa-aatataatcaacacatactaacaccata 336  Q
    |||||||| |||||||  ||||||||||||||||||||||||||||    
T  14471255 tattcatcttcttatattaatataatcaacacatactaacaccata 14471300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 23538025 - 23538069
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||| | |||||||||||||| |||||    
T  23538025 agtacatttaacaactcatagacaacatcatgtaatcattatcac 23538069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27222876 - 27222920
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  27222876 agtacatttaacaactcatagataacatcacataatcatcatcac 27222920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 31479495 - 31479455
Alignment:
Q  3 tacacttaacaactcatagatatcatcatgtaatcatcatc 43  Q
    |||| |||||||||||||||||  |||||||||||||||||    
T  31479495 tacatttaacaactcatagataatatcatgtaatcatcatc 31479455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 3e-33; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 19474207 - 19474131
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  19474207 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 19474131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 20294558 - 20294634
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20294558 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 20294634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 18354841 - 18354915
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  18354841 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 18354915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 24768596 - 24768532
Alignment:
Q  2 gtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacaca 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24768596 gtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacaca 24768532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 20912287 - 20912211
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatcac 79  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||| ||| ||||||||||||    
T  20912287 agtacacttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaatacaatataatcatcac 20912211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 15238152 - 15238076
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatcac 79  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||  |||| ||||| ||||||||||||    
T  15238152 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatcatcac 15238076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22108484 - 22108409
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||| || ||||||||    
T  22108484 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatagaatcatca 22108409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 40727434 - 40727358
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatcac 79  Q
    |||||||  ||||||| ||||||||| |||||||||||||||||||||||||||  |||| ||||| ||||||||||||    
T  40727434 agtacaccaaacaacttatagatatcttcatgtaatcatcatcactaataactt--aaactacacaatataatcatcac 40727358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22120626 - 22120551
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatca 78  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||||||||| ||  ||| |||||| |||||||||||    
T  22120626 agtacatttaacaactcatagataacatcatataatcatcatcactaataaatt--aaataacacaatataatcatca 22120551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 336
Target Start/End: Complemental strand, 19473876 - 19473830
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  19473876 gtattcatcatcttatgaaaatataatcaacacatactaacaccata 19473830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 11219882 - 11219927
Alignment:
Q  292 tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  11219882 tattcatcatcttatcaaaatataatcaacacatactaacaccata 11219927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 11224468 - 11224513
Alignment:
Q  292 tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  11224468 tattcatcatcttatcaaaatataatcaacacatactaacaccata 11224513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 11226448 - 11226493
Alignment:
Q  292 tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  11226448 tattcatcatcttatcaaaatataatcaacacatactaacaccata 11226493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 11230280 - 11230325
Alignment:
Q  292 tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  11230280 tattcatcatcttatcaaaatataatcaacacatactaacaccata 11230325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 18355189 - 18355234
Alignment:
Q  292 tattcatcatcttataaaa-tataatcaacacatactaacaccata 336  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  18355189 tattcatcatcttataaaaatataatcaacacatactaacaccata 18355234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 20294815 - 20294859
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  20294815 gtattcatcatcttatgaaaatataatcaacacatactaacacca 20294859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 334
Target Start/End: Complemental strand, 40727112 - 40727069
Alignment:
Q  292 tattcatcatcttataaaa-tataatcaacacatactaacacca 334  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  40727112 tattcatcatcttataaaaatataatcaacacatactaacacca 40727069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 11219622 - 11219662
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  11219622 atcatcatcactaataactttaaaacaacacaatgtaatca 11219662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 11224208 - 11224248
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  11224208 atcatcatcactaataactttaaaacaacacaatgtaatca 11224248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 11226224 - 11226264
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  11226224 atcatcatcactaataactttaaaacaacacaatgtaatca 11226264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 11228030 - 11228070
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  11228030 atcatcatcactaataactttaaaacaacacaatgtaatca 11228070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 11230020 - 11230060
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  11230020 atcatcatcactaataactttaaaacaacacaatgtaatca 11230060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 292 - 330
Target Start/End: Original strand, 11228290 - 11228329
Alignment:
Q  292 tattcatcatcttat-aaaatataatcaacacatactaac 330  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  11228290 tattcatcatcttatcaaaatataatcaacacatactaac 11228329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10751861 - 10751903
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatc 43  Q
    |||||| |||||||||||||||||  |||||||||||||||||    
T  10751861 agtacatttaacaactcatagataatatcatgtaatcatcatc 10751903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 11219599 - 11219629
Alignment:
Q  1 agtacacttaacaactcatagatatcatcat 31  Q
    |||||||||||||||||||||||||||||||    
T  11219599 agtacacttaacaactcatagatatcatcat 11219629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 11224185 - 11224215
Alignment:
Q  1 agtacacttaacaactcatagatatcatcat 31  Q
    |||||||||||||||||||||||||||||||    
T  11224185 agtacacttaacaactcatagatatcatcat 11224215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 11226201 - 11226231
Alignment:
Q  1 agtacacttaacaactcatagatatcatcat 31  Q
    |||||||||||||||||||||||||||||||    
T  11226201 agtacacttaacaactcatagatatcatcat 11226231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 11228007 - 11228037
Alignment:
Q  1 agtacacttaacaactcatagatatcatcat 31  Q
    |||||||||||||||||||||||||||||||    
T  11228007 agtacacttaacaactcatagatatcatcat 11228037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 11229997 - 11230027
Alignment:
Q  1 agtacacttaacaactcatagatatcatcat 31  Q
    |||||||||||||||||||||||||||||||    
T  11229997 agtacacttaacaactcatagatatcatcat 11230027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19510506 - 19510550
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  19510506 agtacatttaacaactcatagataacatcacataatcatcatcac 19510550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 22339056 - 22339100
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  22339056 agtacatttaacaactcatagataacatcacataatcatcatcac 22339100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 23113437 - 23113393
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  23113437 agtacatttaacaactcatagataacatcacataatcatcatcac 23113393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 28372116 - 28372072
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  28372116 agtacatttaacaactcatagataacatcacataatcatcatcac 28372072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37600043 - 37599999
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  37600043 agtacatttaacaactcatagataacatcacataatcatcatcac 37599999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 38146453 - 38146409
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  38146453 agtacatttaacaactcatagataacatcacataatcatcatcac 38146409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 39362991 - 39363027
Alignment:
Q  6 acttaacaactcatagatatcatcatgtaatcatcat 42  Q
    ||||||||||||||||| | |||||||||||||||||    
T  39362991 acttaacaactcatagacaacatcatgtaatcatcat 39363027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 41878686 - 41878642
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  41878686 agtacatttaacaactcatagataacatcacataatcatcatcac 41878642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 3e-33; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 9555113 - 9555189
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9555113 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 9555189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 14759026 - 14758950
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14759026 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 14758950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 14955794 - 14955718
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14955794 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 14955718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 17807098 - 17807174
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17807098 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 17807174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 25688486 - 25688562
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25688486 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 25688562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 4562808 - 4562732
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  4562808 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacccaatataatcatc 4562732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 5758490 - 5758414
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  5758490 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatagaatcatc 5758414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 33740880 - 33740956
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  33740880 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataattttaaaacaacacaatataatcatc 33740956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 20158482 - 20158408
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  20158482 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 20158408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 20161158 - 20161084
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatca 75  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||    
T  20161158 agtacacttaacaactcatagatatcatcatgtaatcgtcatcactaataactttaaaacaacacaatgtaatca 20161084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 20163933 - 20163859
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatca 75  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||    
T  20163933 agtacacttaacaactcatagatatcatcatgtaatcgtcatcactaataactttaaaacaacacaatgtaatca 20163859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 12486315 - 12486388
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||    
T  12486315 agtacacttaacaactcatagatatcatcatgta---atcatcactaataactttaaaacaacacaatataatcatc 12486388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 23997001 - 23996925
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatcac 79  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||| ||||||||||||    
T  23997001 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatcac 23996925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 10711869 - 10711943
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  10711869 agtacatttaacaactcctagataacatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 10711943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 10925639 - 10925713
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  10925639 agtacatttaacaactcctagataacatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 10925713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 12422987 - 12423062
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||| |||||||||||    
T  12422987 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 12423062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17052480 - 17052405
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||| |||||||||||    
T  17052480 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 17052405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 631782 - 631706
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatcac 79  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||| ||||||| ||||    
T  631782 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcgtcac 631706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 22634961 - 22634885
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatcac 79  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||| ||| ||||||||    
T  22634961 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatatgatcatcac 22634885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 27532796 - 27532872
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatcac 79  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||||||  |||| ||||| ||||||||||||    
T  27532796 agtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatcatcac 27532872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 13813867 - 13813820
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaa 48  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||    
T  13813867 agtacatttaacaactcatagataacatcatgtaatcatcatcactaa 13813820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 13818355 - 13818308
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaa 48  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||    
T  13818355 agtacatttaacaactcatagataacatcatgtaatcatcatcactaa 13818308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 12486570 - 12486615
Alignment:
Q  292 tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  12486570 tattcatcatcttatcaaaatataatcaacacatactaacaccata 12486615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Complemental strand, 4562477 - 4562433
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  4562477 gtattcatcatcttatgaaaatataatcaacacatactaacacca 4562433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 9555444 - 9555488
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  9555444 gtattcatcatcttatgaaaatataatcaacacatactaacacca 9555488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Complemental strand, 14758618 - 14758574
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  14758618 gtattcatcatcttatgaaaatataatcaacacatactaacacca 14758574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Complemental strand, 14955383 - 14955339
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  14955383 gtattcatcatcttatgaaaatataatcaacacatactaacacca 14955339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 24048419 - 24048375
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||    
T  24048419 agtacatttaacaactcatagataacatcatgtaatcatcatcac 24048375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 33741214 - 33741258
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  33741214 gtattcatcatcttatgaaaatataatcaacacatactaacacca 33741258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 334
Target Start/End: Complemental strand, 5758001 - 5757958
Alignment:
Q  292 tattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  5758001 tattcatcatcttatgaaaatataatcaacacatactaacacca 5757958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 333
Target Start/End: Original strand, 25688817 - 25688860
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacc 333  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  25688817 gtattcatcatcttatgaaaatataatcaacacatactaacacc 25688860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 15223590 - 15223632
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatc 43  Q
    |||||| |||||||||||||||||  |||||||||||||||||    
T  15223590 agtacatttaacaactcatagataatatcatgtaatcatcatc 15223632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15533263 - 15533307
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  15533263 agtacatttaacaactcatagataacatcacataatcatcatcac 15533307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 18211648 - 18211692
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  18211648 agtacatttaacaactcatagataacatcacataatcatcatcac 18211692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 49549117 - 49549073
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  49549117 agtacatttaacaactcatagataacatcacataatcatcatcac 49549073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 3e-33; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 7108282 - 7108358
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7108282 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 7108358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 7112217 - 7112293
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7112217 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 7112293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 11068657 - 11068733
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11068657 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 11068733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 15616221 - 15616297
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15616221 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacattataatcatc 15616297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 22320173 - 22320249
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22320173 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 22320249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 22335228 - 22335304
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22335228 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 22335304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 55021420 - 55021496
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  55021420 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 55021496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 11167128 - 11167052
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11167128 agtaaacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 11167052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 14497991 - 14498067
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  14497991 agtacacttaacaactcatagatatcatcatgtaatcatcatcgctaataactttaaaacaacacaatataatcatc 14498067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 28948505 - 28948581
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28948505 agtacacttaacaacttatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 28948581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 5219891 - 5219965
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  5219891 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 5219965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 11853750 - 11853824
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  11853750 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 11853824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 37440715 - 37440641
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  37440715 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 37440641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 11301700 - 11301626
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||    
T  11301700 agtacacttaacaactcatagatatcatcatgcaatcatcatcactaataactttaaaacaacacaatgtaatca 11301626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 14664469 - 14664543
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||    
T  14664469 agtacacttaacaactcatagatatcattatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14664543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 14667633 - 14667707
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatca 75  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  14667633 agtacacttaacaactcatagatctcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14667707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16795547 - 16795622
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||| |||||||||||    
T  16795547 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 16795622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18933390 - 18933337
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18933390 agtacacttaacaactcatagataacatcatgtaatcatcatcactaataactt 18933337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30064429 - 30064482
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  30064429 agtacacttaacaactcatagataacatcatgtaatcatcatcactaataactt 30064482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 12853398 - 12853325
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcat 76  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||| ||  |||||||||| |||||||||    
T  12853398 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 12853325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 4590195 - 4590119
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatcac 79  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||||||  |||| ||||| ||||||| ||||    
T  4590195 agtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatcgtcac 4590119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 14068095 - 14068021
Alignment:
Q  3 tacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatcac 79  Q
    |||| ||| |||||| |||||| |||||||||||||||||||||||||||||  |||| ||||| ||||||||||||    
T  14068095 tacatttagcaactcctagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatcatcac 14068021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14670070 - 14670142
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||   |||||||||||||||||  |||||||||| |||||||||||    
T  14670070 agtacatttaacaactcatagataacatcatgta---atcatcactaataactt--aaacaacacaatataatcatca 14670142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 15463922 - 15463999
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatc-atcactaataactttaaaacaacacagtataatcatcac 79  Q
    |||||| ||||||||||||| ||| |||| |||||||||| ||||||||||||||  |||||||||| ||||||||||||    
T  15463922 agtacatttaacaactcatatataacatcctgtaatcatcaatcactaataactt--aaacaacacaatataatcatcac 15463999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12337300 - 12337348
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataa 51  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  12337300 agtacacttaacaactcata--tatcatcatgtaatcatcatcactaataa 12337348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 17318544 - 17318468
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatcac 79  Q
    |||||| |||||||||| |||||| | ||||||| |||||||||||||||||||  |||| ||||| ||||||||||||    
T  17318544 agtacatttaacaactcctagataacttcatgtattcatcatcactaataactt--aaactacacaatataatcatcac 17318468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 77
Target Start/End: Complemental strand, 4112649 - 4112607
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  4112649 atcatcatcactaataactttaaaacaacacaatataatcatc 4112607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 336
Target Start/End: Original strand, 11069065 - 11069111
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  11069065 gtattcatcatcttatgaaaatataatcaacacatactaacaccata 11069111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 4108800 - 4108759
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatcat 76  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  4108800 atcatcatcactaataactttaaaacaacacaatataatcat 4108759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 15963824 - 15963869
Alignment:
Q  292 tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  15963824 tattcatcatcttatcaaaatataatcaacacatactaacaccata 15963869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 15967748 - 15967793
Alignment:
Q  292 tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  15967748 tattcatcatcttatcaaaatataatcaacacatactaacaccata 15967793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 15971672 - 15971717
Alignment:
Q  292 tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  15971672 tattcatcatcttatcaaaatataatcaacacatactaacaccata 15971717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 7108613 - 7108657
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  7108613 gtattcatcatcttatgaaaatataatcaacacatactaacacca 7108657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 7112548 - 7112592
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  7112548 gtattcatcatcttatgaaaatataatcaacacatactaacacca 7112592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Complemental strand, 11166720 - 11166676
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  11166720 gtattcatcatcttatgaaaatataatcaacacatactaacacca 11166676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 14498322 - 14498366
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  14498322 gtattcatcatcttatgaaaatataatcaacacatactaacacca 14498366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 15616552 - 15616596
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  15616552 gtattcatcatcttatgaaaatataatcaacacatactaacacca 15616596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 22320581 - 22320625
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  22320581 gtattcatcatcttatgaaaatataatcaacacatactaacacca 22320625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 22335636 - 22335680
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  22335636 gtattcatcatcttatgaaaatataatcaacacatactaacacca 22335680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 28948759 - 28948803
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  28948759 gtattcatcatcttatgaaaatataatcaacacatactaacacca 28948803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 30064764 - 30064808
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  30064764 gtattcatcatcttatgaaaatataatcaacacatactaacacca 30064808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 55021902 - 55021946
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  55021902 gtattcatcatcttatgaaaatataatcaacacatactaacacca 55021946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 334
Target Start/End: Complemental strand, 4108430 - 4108387
Alignment:
Q  292 tattcatcatcttataaaa-tataatcaacacatactaacacca 334  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  4108430 tattcatcatcttataaaaatataatcaacacatactaacacca 4108387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 334
Target Start/End: Complemental strand, 4112282 - 4112239
Alignment:
Q  292 tattcatcatcttataaaa-tataatcaacacatactaacacca 334  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  4112282 tattcatcatcttataaaaatataatcaacacatactaacacca 4112239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 336
Target Start/End: Complemental strand, 14067718 - 14067672
Alignment:
Q  291 gtattcatcatcttata-aaatataatcaacacatactaacaccata 336  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  14067718 gtattcatcatcttatataaatataatcaacacatactgacaccata 14067672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10834976 - 10834935
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcat 42  Q
    |||||| ||||||||||||||||| |||||||||||||||||    
T  10834976 agtacatttaacaactcatagataacatcatgtaatcatcat 10834935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8928902 - 8928858
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| ||||||| ||||||||||||    
T  8928902 agtacatttaacaactcatagataacatcatgcaatcatcatcac 8928858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 13435862 - 13435906
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||| ||| ||||||||||||||||||||    
T  13435862 agtacatttaacaactcatatataacatcatgtaatcatcatcac 13435906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 15963564 - 15963604
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  15963564 atcatcatcactaataactttaaaacaacacaatgtaatca 15963604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 15967488 - 15967528
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  15967488 atcatcatcactaataactttaaaacaacacaatgtaatca 15967528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 15971412 - 15971452
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  15971412 atcatcatcactaataactttaaaacaacacaatgtaatca 15971452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14681594 - 14681664
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatca 78  Q
    |||||| |||||||||||  |||| |||||||||   |||||||||||||||||  |||||||||| |||||||||||    
T  14681594 agtacatttaacaactca--gataacatcatgta---atcatcactaataactt--aaacaacacaatataatcatca 14681664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16751936 - 16751895
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcat 42  Q
    |||||| |||||||||||||||||  ||||||||||||||||    
T  16751936 agtacatttaacaactcatagataatatcatgtaatcatcat 16751895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 3802014 - 3802058
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  3802014 agtacatttaacaactcatagataacatcacataatcatcatcac 3802058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 14764830 - 14764786
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  14764830 agtacatttaacaactcatagataacatcacataatcatcatcac 14764786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20249884 - 20249840
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  20249884 agtacatttaacaactcatagataacatcacataatcatcatcac 20249840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29545973 - 29545929
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  29545973 agtacatttaacaactcatagataacatcacataatcatcatcac 29545929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 54519641 - 54519685
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  54519641 agtacatttaacaactcatagataacatcacataatcatcatcac 54519685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 24630082 - 24630006
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24630082 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 24630006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 24645195 - 24645271
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24645195 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 24645271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 24647971 - 24648047
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24647971 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 24648047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 27600415 - 27600491
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27600415 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 27600491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 30346692 - 30346616
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30346692 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 30346616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 10103331 - 10103255
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10103331 agtacacttaacaactcatagatatcaacatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 10103255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 12902641 - 12902565
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12902641 agtacacttaacaactcatagatatcattatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12902565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 27381028 - 27380952
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  27381028 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacaccatataatcatc 27380952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 27384998 - 27384922
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  27384998 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacaccatataatcatc 27384922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 31343961 - 31344035
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatca 75  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||    
T  31343961 agtacacctaacaactcatagatatcttcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 31344035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9784038 - 9784113
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatca 78  Q
    |||||| | ||||||||||||||| |||||||||||||||||||||||||||||  |||||||||| |||||| ||||    
T  9784038 agtacattaaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataattatca 9784113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 41532194 - 41532149
Alignment:
Q  292 tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  41532194 tattcatcatcttatcaaaatataatcaacacatactaacaccata 41532149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Complemental strand, 10103000 - 10102956
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  10103000 gtattcatcatcttatgaaaatataatcaacacatactaacacca 10102956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Complemental strand, 24629671 - 24629627
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  24629671 gtattcatcatcttatgaaaatataatcaacacatactaacacca 24629627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Complemental strand, 27380544 - 27380500
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  27380544 gtattcatcatcttatgaaaatataatcaacacatactaacacca 27380500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Complemental strand, 27384590 - 27384546
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  27384590 gtattcatcatcttatgaaaatataatcaacacatactaacacca 27384546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 27600746 - 27600790
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  27600746 gtattcatcatcttatgaaaatataatcaacacatactaacacca 27600790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Complemental strand, 30346207 - 30346163
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  30346207 gtattcatcatcttatgaaaatataatcaacacatactaacacca 30346163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 1282351 - 1282396
Alignment:
Q  292 tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||    
T  1282351 tattcatcatcttatcaaaatgtaatcaacacatactaacaccata 1282396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 41532454 - 41532414
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  41532454 atcatcatcactaataactttaaaacaacacaatgtaatca 41532414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 41532477 - 41532447
Alignment:
Q  1 agtacacttaacaactcatagatatcatcat 31  Q
    |||||||||||||||||||||||||||||||    
T  41532477 agtacacttaacaactcatagatatcatcat 41532447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6481828 - 6481872
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  6481828 agtacatttaacaactcatagataacatcacataatcatcatcac 6481872  T

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Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6485295 - 6485339
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  6485295 agtacatttaacaactcatagataacatcacataatcatcatcac 6485339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19663592 - 19663548
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  19663592 agtacatttaacaactcatagataacatcacataatcatcatcac 19663548  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 20260301 - 20260345
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  20260301 agtacatttaacaactcatagataacatcacataatcatcatcac 20260345  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 21074542 - 21074498
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| ||||||||  ||||||||||    
T  21074542 agtacatttaacaactcatagataacatcatgttgtcatcatcac 21074498  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 24647138 - 24647166
Alignment:
Q  1 agtacacttaacaactcatagatatcatc 29  Q
    |||||||||||||||||||||||||||||    
T  24647138 agtacacttaacaactcatagatatcatc 24647166  T

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Target: chr1 (Bit Score: 73; Significance: 3e-33; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 1009306 - 1009382
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1009306 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 1009382  T

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Target: chr1; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 1926830 - 1926754
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1926830 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 1926754  T

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Target: chr1; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 16376850 - 16376774
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16376850 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 16376774  T

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Target: chr1; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 20925844 - 20925768
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20925844 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 20925768  T

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Target: chr1; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 52634312 - 52634388
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  52634312 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 52634388  T

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Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 33796077 - 33796151
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  33796077 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 33796151  T

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Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22132133 - 22132058
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||| |||||||||||    
T  22132133 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 22132058  T

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Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 20230173 - 20230120
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20230173 agtacacttaacaactcatagataacatcatgtaatcatcatcactaataactt 20230120  T

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Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 21406297 - 21406373
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatcac 79  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||||||  |||| ||||| ||||||||||||    
T  21406297 agtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatcatcac 21406373  T

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Target: chr1; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 41801313 - 41801238
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatca 78  Q
    |||||| |||||||||||||||||  ||||||||||||||||||||||||| ||  |||||||||| |||||||||||    
T  41801313 agtacatttaacaactcatagataatatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcatca 41801238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 1009637 - 1009681
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  1009637 gtattcatcatcttatgaaaatataatcaacacatactaacacca 1009681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Complemental strand, 1926345 - 1926301
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  1926345 gtattcatcatcttatgaaaatataatcaacacatactaacacca 1926301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Complemental strand, 16376596 - 16376552
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  16376596 gtattcatcatcttatgaaaatataatcaacacatactaacacca 16376552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Complemental strand, 20925359 - 20925315
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  20925359 gtattcatcatcttatgaaaatataatcaacacatactaacacca 20925315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 52634723 - 52634767
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  52634723 gtattcatcatcttatgaaaatataatcaacacatactaacacca 52634767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 336
Target Start/End: Original strand, 33796462 - 33796503
Alignment:
Q  296 catcatcttataaaa-tataatcaacacatactaacaccata 336  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  33796462 catcatcttataaaaatataatcaacacatactaacaccata 33796503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 39245205 - 39245163
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatc 43  Q
    |||||| |||||||||||||||||  |||||||||||||||||    
T  39245205 agtacatttaacaactcatagataatatcatgtaatcatcatc 39245163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 39248760 - 39248718
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatc 43  Q
    |||||| |||||||||||||||||  |||||||||||||||||    
T  39248760 agtacatttaacaactcatagataatatcatgtaatcatcatc 39248718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 41389699 - 41389657
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatc 43  Q
    |||||| |||||||||||||||||  |||||||||||||||||    
T  41389699 agtacatttaacaactcatagataatatcatgtaatcatcatc 41389657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 16370969 - 16371013
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  16370969 agtacatttaacaactcatagataacatcacataatcatcatcac 16371013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 6355 - 6279
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  6355 agtacacttaacaactcatagatatcatcatgtaatcatcatcgctaataactttaaaacaacacaatataatcatc 6279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Complemental strand, 6211 - 6167
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  6211 gtattcatcatcttatgaaaatataatcaacacatactaacacca 6167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 11095 - 11160
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacaca 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11095 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacaca 11160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 11431 - 11475
Alignment:
Q  291 gtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  11431 gtattcatcatcttatgaaaatataatcaacacatactaacacca 11475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 60360 - 60283
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataac-tttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  60360 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataacttttaaaacaacacaatataatcatc 60283  T

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Target: scaffold0166 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 11093 - 11029
Alignment:
Q  2 gtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacaca 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11093 gtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacaca 11029  T

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Target: scaffold1852 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 855 - 781
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||    
T  855 agtacacttaacaactcatagatatcatcatgcaatcatcatcactaataactttaaaacaacacaatgtaatca 781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 14888 - 14962
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||    
T  14888 agtacacttaacaactcatagatatcttcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 8621 - 8685
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacac 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8621 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaaaaacac 8685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 34162 - 34089
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||| ||||||||||    
T  34162 agtacacttaacaactcatagatatcatcatgtaatc---atcactaataactttaaaacaacacaatataatcatc 34089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 33907 - 33862
Alignment:
Q  292 tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  33907 tattcatcatcttatcaaaatataatcaacacatactaacaccata 33862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 11821 - 11895
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatca 75  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| | ||||||    
T  11821 agtacacttaacaactcatagatttcatcatgtaatcatcatcactaataattttaaaacaacacaatgtaatca 11895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 21374 - 21298
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  21374 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataacttt-aaacaacacaatataatcatca 21298  T

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Target: scaffold0575 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 6995 - 6920
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||| |||||||||||    
T  6995 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 6920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 25602 - 25526
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatcac 79  Q
    |||||| ||||||||||||||||| ||||||||| |||||||||||||||||||  |||||||||| ||||||||||||    
T  25602 agtacatttaacaactcatagataacatcatgtattcatcatcactaataactt--aaacaacacaatataatcatcac 25526  T

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Target: scaffold0142 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 8773 - 8699
Alignment:
Q  2 gtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatca 78  Q
    ||||| |||||||||| |||||| |||||||||||||||||||||||||| ||  |||||||||| |||||||||||    
T  8773 gtacatttaacaactcgtagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcatca 8699  T

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Target: scaffold0380 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 4018 - 4094
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatcac 79  Q
    |||||| |||||||||| |||||| |||||||||||||| ||||||||||||||  |||| ||||| ||||||||||||    
T  4018 agtacatttaacaactcctagataacatcatgtaatcataatcactaataactt--aaactacacaatataatcatcac 4094  T

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Target: scaffold0013 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 74366 - 74291
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatca 78  Q
    |||||| ||||||||||||||||| ||||||||||||||| |||||||||| ||  |||||||||  |||||||||||    
T  74366 agtacatttaacaactcatagataacatcatgtaatcatcttcactaataaatt--aaacaacaccatataatcatca 74291  T

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Target: scaffold0109 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 37232 - 37179
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 54  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||||||    
T  37232 agtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt 37179  T

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Target: scaffold0029 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 62874 - 62821
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 54  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||||||    
T  62874 agtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt 62821  T

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Target: scaffold0029; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 336
Target Start/End: Original strand, 79489 - 79535
Alignment:
Q  291 gtattcatcatcttata-aaatataatcaacacatactaacaccata 336  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||    
T  79489 gtattcatcatcttacataaatataatcaacacatactaacaccata 79535  T

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Target: scaffold0299 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 5869 - 5917
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataa 51  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  5869 agtacacttaacaactcata--tatcatcatgtaatcatcatcactaataa 5917  T

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Target: scaffold0327 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 18867 - 18942
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacagtataatcatca 78  Q
    |||||| ||||||||| ||||||| |||||  ||||||||||||||||||||  | |||||||||| |||||||||||    
T  18867 agtacatttaacaacttatagataacatcacataatcatcatcactaataac--tgaaacaacacaatataatcatca 18942  T

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Target: scaffold0141 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 15326 - 15281
Alignment:
Q  292 tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  15326 tattcatcatcttatcaaaatataatcaacacatactaacaccata 15281  T

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Target: scaffold0141; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 15586 - 15546
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  15586 atcatcatcactaataactttaaaacaacacaatgtaatca 15546  T

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Target: scaffold0141; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 15609 - 15579
Alignment:
Q  1 agtacacttaacaactcatagatatcatcat 31  Q
    |||||||||||||||||||||||||||||||    
T  15609 agtacacttaacaactcatagatatcatcat 15579  T

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Target: scaffold0080 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28516 - 28560
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||    
T  28516 agtacatttaacaactcatagataacatcatgtaatcatcatcac 28560  T

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Target: scaffold0080; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 33981 - 34025
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||    
T  33981 agtacatttaacaactcatagataacatcatgtaatcatcatcac 34025  T

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Target: scaffold0031 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37237 - 37161
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac-taataactttaaaacaacacagtataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||||||||||| | |||||||||  | || ||||| |||||||||||    
T  37237 agtacatttaacaactcatagataacatcatgtaatcatcatctcataataactt--agaccacacaatataatcatca 37161  T

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Target: scaffold0525 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 5565 - 5512
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 54  Q
    ||||||| ||| |||||||| ||||| |||| ||||||||||||||||||||||    
T  5565 agtacacctaagaactcataaatatcttcatataatcatcatcactaataactt 5512  T

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Target: scaffold0525; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 292 - 334
Target Start/End: Complemental strand, 5049 - 5006
Alignment:
Q  292 tattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    ||||||||||||||| |||| |||||||||||||||||||||||    
T  5049 tattcatcatcttatgaaaacataatcaacacatactaacacca 5006  T

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Target: scaffold0200 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 10834 - 10874
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacagtataatca 75  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  10834 atcatcatcactaataactttaaaacaacacaatgtaatca 10874  T

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Target: scaffold1873 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1873
Description:

Target: scaffold1873; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 691 - 753
Alignment:
Q  16 tcatagatatcatcatgtaatcatca-tcactaataactttaaaacaacacagtataatcatcac 79  Q
    |||| |||| ||||||||||||| || |||||||||||||  |||||||||| ||||||||||||    
T  691 tcatggataacatcatgtaatcaccaatcactaataactt--aaacaacacaatataatcatcac 753  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 153840 - 153803
Alignment:
Q  8 ttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  153840 ttaacaactcatagatgacatcatgtaatcatcatcac 153803  T

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Target: scaffold1427 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 244 - 288
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  244 agtacatttaacaactcatagataacatcacataatcatcatcac 288  T

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Target: scaffold0842 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5286 - 5330
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  5286 agtacatttaacaactcatagataacatcacataatcatcatcac 5330  T

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Target: scaffold0337 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10856 - 10812
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  10856 agtacatttaacaactcatagataacatcacataatcatcatcac 10812  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 109645 - 109689
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  109645 agtacatttaacaactcatagataacatcacataatcatcatcac 109689  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 224177 - 224133
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  224177 agtacatttaacaactcatagataacatcacataatcatcatcac 224133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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