View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21669_high_12 (Length: 355)

Name: NF21669_high_12
Description: NF21669
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21669_high_12
NF21669_high_12
[»] chr4 (42 HSPs)
chr4 (2-339)||(31093065-31093401)
chr4 (5-339)||(35158681-35159013)
chr4 (2-339)||(1602743-1603078)
chr4 (2-339)||(30003570-30003908)
chr4 (2-339)||(33281046-33281378)
chr4 (2-347)||(52416768-52417112)
chr4 (2-339)||(28780618-28780954)
chr4 (14-347)||(45462222-45462540)
chr4 (2-339)||(45229028-45229364)
chr4 (2-339)||(49374278-49374609)
chr4 (2-339)||(9035943-9036278)
chr4 (2-339)||(16023832-16024160)
chr4 (2-302)||(38218142-38218446)
chr4 (25-332)||(40728008-40728314)
chr4 (2-339)||(55136624-55136962)
chr4 (2-339)||(2013558-2013911)
chr4 (5-339)||(56463490-56463818)
chr4 (2-347)||(6963414-6963775)
chr4 (8-312)||(43841744-43842050)
chr4 (2-279)||(51538604-51538881)
chr4 (2-339)||(168365-168718)
chr4 (2-177)||(4189879-4190052)
chr4 (2-334)||(38551100-38551446)
chr4 (2-181)||(45924558-45924735)
chr4 (2-165)||(4048093-4048254)
chr4 (2-181)||(15542842-15543018)
chr4 (2-165)||(16451890-16452051)
chr4 (2-177)||(28310895-28311069)
chr4 (19-165)||(35319913-35320058)
chr4 (211-339)||(45924786-45924911)
chr4 (212-339)||(4189699-4189823)
chr4 (214-339)||(35319722-35319844)
chr4 (202-339)||(4048312-4048444)
chr4 (26-109)||(39807350-39807432)
chr4 (27-109)||(20516650-20516734)
chr4 (27-121)||(40602725-40602818)
chr4 (202-347)||(28310721-28310849)
chr4 (40-145)||(34953601-34953705)
chr4 (255-339)||(15542675-15542759)
chr4 (213-291)||(16452120-16452195)
chr4 (7-99)||(49604462-49604553)
chr4 (30-121)||(56084099-56084189)
[»] chr8 (34 HSPs)
chr8 (2-339)||(39318438-39318774)
chr8 (2-339)||(11076187-11076523)
chr8 (2-347)||(40105084-40105427)
chr8 (2-338)||(8239832-8240166)
chr8 (4-339)||(35683858-35684192)
chr8 (2-339)||(39260135-39260471)
chr8 (2-181)||(43098546-43098723)
chr8 (2-181)||(6347255-6347432)
chr8 (2-165)||(32337770-32337931)
chr8 (2-148)||(32947038-32947183)
chr8 (50-339)||(20091867-20092173)
chr8 (2-181)||(37098295-37098470)
chr8 (2-165)||(23144124-23144286)
chr8 (7-152)||(31701074-31701217)
chr8 (2-165)||(586428-586589)
chr8 (2-165)||(627334-627495)
chr8 (150-339)||(42131743-42131932)
chr8 (214-339)||(32947197-32947319)
chr8 (202-339)||(13546084-13546218)
chr8 (202-339)||(13678255-13678389)
chr8 (197-329)||(6347469-6347598)
chr8 (197-296)||(37098507-37098603)
chr8 (2-62)||(13546308-13546367)
chr8 (2-62)||(13678106-13678165)
chr8 (212-339)||(43098370-43098494)
chr8 (2-82)||(42131968-42132046)
chr8 (202-334)||(627553-627682)
chr8 (187-339)||(31700872-31701021)
chr8 (42-121)||(28284449-28284527)
chr8 (213-334)||(32338000-32338118)
chr8 (202-334)||(586241-586370)
chr8 (40-111)||(11457022-11457092)
chr8 (27-111)||(4258771-4258854)
chr8 (213-339)||(23143946-23144069)
[»] chr1 (40 HSPs)
chr1 (2-347)||(42882425-42882769)
chr1 (2-347)||(37952259-37952603)
chr1 (2-339)||(44496444-44496780)
chr1 (2-339)||(29961356-29961690)
chr1 (2-339)||(41723487-41723825)
chr1 (2-339)||(14587180-14587522)
chr1 (2-291)||(33801321-33801612)
chr1 (2-339)||(41900119-41900466)
chr1 (2-271)||(3517487-3517754)
chr1 (2-339)||(38860636-38860989)
chr1 (2-181)||(41091127-41091304)
chr1 (2-177)||(50261997-50262170)
chr1 (2-181)||(41086359-41086536)
chr1 (2-250)||(12700468-12700718)
chr1 (2-165)||(49851668-49851829)
chr1 (4-166)||(12528407-12528567)
chr1 (19-181)||(11952422-11952583)
chr1 (2-165)||(27216758-27216919)
chr1 (2-165)||(23984056-23984214)
chr1 (2-180)||(52632362-52632536)
chr1 (2-132)||(44757581-44757710)
chr1 (124-279)||(48964832-48964986)
chr1 (197-339)||(12528619-12528758)
chr1 (197-339)||(50261817-50261956)
chr1 (197-339)||(52632187-52632325)
chr1 (146-271)||(22858800-22858924)
chr1 (197-339)||(41086573-41086712)
chr1 (197-339)||(41091341-41091480)
chr1 (2-98)||(48964984-48965079)
chr1 (2-88)||(22858717-22858801)
chr1 (184-339)||(23983864-23984016)
chr1 (25-122)||(30518198-30518294)
chr1 (164-305)||(44757431-44757572)
chr1 (213-334)||(49851898-49852016)
chr1 (40-121)||(34549851-34549931)
chr1 (208-334)||(27216982-27217105)
chr1 (26-145)||(29913810-29913928)
chr1 (285-339)||(22858924-22858978)
chr1 (285-338)||(3517434-3517487)
chr1 (74-111)||(22334963-22335000)
[»] chr5 (33 HSPs)
chr5 (2-337)||(3556580-3556914)
chr5 (2-339)||(37012783-37013119)
chr5 (2-341)||(8734653-8734990)
chr5 (19-339)||(27114280-27114596)
chr5 (2-339)||(16513433-16513772)
chr5 (2-347)||(18808938-18809284)
chr5 (2-339)||(12785113-12785451)
chr5 (2-339)||(12723630-12723968)
chr5 (2-339)||(13821915-13822251)
chr5 (2-291)||(8197367-8197658)
chr5 (2-269)||(38679363-38679631)
chr5 (16-181)||(37030262-37030426)
chr5 (2-165)||(26278994-26279155)
chr5 (2-181)||(37883384-37883561)
chr5 (85-339)||(8299062-8299319)
chr5 (19-165)||(25977152-25977293)
chr5 (19-165)||(9715329-9715474)
chr5 (19-181)||(11719939-11720101)
chr5 (208-339)||(37883609-37883737)
chr5 (14-106)||(15858789-15858880)
chr5 (2-94)||(2606076-2606166)
chr5 (16-95)||(8300857-8300935)
chr5 (213-334)||(11719768-11719886)
chr5 (28-144)||(27495146-27495261)
chr5 (213-334)||(25976965-25977083)
chr5 (212-334)||(26279223-26279341)
chr5 (30-111)||(32695017-32695098)
chr5 (26-107)||(22911851-22911931)
chr5 (255-330)||(9715144-9715219)
chr5 (30-111)||(23252461-23252541)
chr5 (9-102)||(27690513-27690604)
chr5 (26-122)||(41616070-41616163)
chr5 (197-253)||(37030170-37030226)
[»] chr6 (12 HSPs)
chr6 (4-338)||(31271310-31271643)
chr6 (2-339)||(303713-304051)
chr6 (2-339)||(16395274-16395613)
chr6 (2-339)||(438990-439329)
chr6 (2-339)||(31722725-31723050)
chr6 (4-338)||(9304800-9305129)
chr6 (26-182)||(31318517-31318672)
chr6 (19-165)||(20818508-20818653)
chr6 (197-287)||(31318708-31318795)
chr6 (35-106)||(28546865-28546934)
chr6 (30-62)||(6837318-6837350)
chr6 (27-111)||(17519837-17519920)
[»] chr2 (30 HSPs)
chr2 (2-339)||(17137546-17137888)
chr2 (2-339)||(17308916-17309254)
chr2 (2-339)||(6404074-6404409)
chr2 (2-339)||(38703427-38703765)
chr2 (2-339)||(30490521-30490859)
chr2 (2-339)||(45117029-45117369)
chr2 (2-277)||(44760051-44760325)
chr2 (16-264)||(15911748-15911998)
chr2 (2-181)||(13278653-13278830)
chr2 (19-181)||(31994078-31994239)
chr2 (2-171)||(1209942-1210109)
chr2 (19-181)||(7942743-7942904)
chr2 (2-162)||(18137548-18137706)
chr2 (2-127)||(38207443-38207567)
chr2 (124-339)||(38208411-38208626)
chr2 (187-336)||(1209759-1209904)
chr2 (211-336)||(13278881-13279003)
chr2 (212-334)||(1115287-1115406)
chr2 (27-145)||(21485295-21485412)
chr2 (65-148)||(1114728-1114811)
chr2 (30-121)||(33945914-33946004)
chr2 (25-122)||(24168498-24168594)
chr2 (213-334)||(7942573-7942691)
chr2 (27-122)||(16739457-16739548)
chr2 (19-111)||(37127963-37128055)
chr2 (40-116)||(21649746-21649821)
chr2 (30-102)||(18963339-18963410)
chr2 (213-334)||(31993907-31994025)
chr2 (258-339)||(45234447-45234528)
chr2 (7-55)||(5939191-5939239)
[»] chr7 (20 HSPs)
chr7 (6-347)||(46254829-46255168)
chr7 (2-339)||(25528952-25529285)
chr7 (2-338)||(33950889-33951227)
chr7 (2-347)||(43458146-43458485)
chr7 (21-338)||(14816500-14816813)
chr7 (21-338)||(15263496-15263809)
chr7 (2-337)||(36311927-36312260)
chr7 (2-339)||(35794436-35794759)
chr7 (26-301)||(34847753-34848030)
chr7 (150-347)||(44866155-44866352)
chr7 (2-116)||(44862975-44863088)
chr7 (2-128)||(42321186-42321310)
chr7 (49-151)||(1377355-1377456)
chr7 (30-145)||(1852136-1852250)
chr7 (2-109)||(3601045-3601150)
chr7 (26-121)||(26188232-26188326)
chr7 (7-145)||(19646909-19647046)
chr7 (27-111)||(31326691-31326774)
chr7 (30-108)||(1906602-1906679)
chr7 (26-83)||(10907012-10907068)
[»] chr3 (30 HSPs)
chr3 (2-341)||(40937176-40937514)
chr3 (2-339)||(149285-149621)
chr3 (2-339)||(36402553-36402888)
chr3 (2-339)||(47646874-47647214)
chr3 (2-339)||(26502032-26502370)
chr3 (14-338)||(10509062-10509388)
chr3 (2-271)||(47013626-47013895)
chr3 (2-339)||(39586532-39586864)
chr3 (2-181)||(227588-227766)
chr3 (2-181)||(32529759-32529936)
chr3 (2-177)||(39353257-39353430)
chr3 (2-181)||(41193718-41193895)
chr3 (2-181)||(6936427-6936604)
chr3 (6-148)||(41174772-41174913)
chr3 (19-162)||(49166130-49166271)
chr3 (150-339)||(41182006-41182195)
chr3 (26-165)||(31765219-31765357)
chr3 (18-151)||(33843491-33843623)
chr3 (213-330)||(49165944-49166058)
chr3 (27-111)||(42899201-42899284)
chr3 (30-121)||(51328989-51329079)
chr3 (26-111)||(53393928-53394012)
chr3 (197-302)||(6936640-6936742)
chr3 (30-121)||(25214595-25214685)
chr3 (184-279)||(53814818-53814910)
chr3 (2-99)||(10494800-10494895)
chr3 (221-334)||(31765034-31765144)
chr3 (188-253)||(39353462-39353527)
chr3 (27-83)||(12717635-12717690)
chr3 (40-84)||(27023918-27023961)
[»] scaffold1301 (2 HSPs)
scaffold1301 (19-191)||(1631-1802)
scaffold1301 (302-338)||(1867-1903)
[»] scaffold0054 (1 HSPs)
scaffold0054 (27-137)||(19067-19176)
[»] scaffold0160 (1 HSPs)
scaffold0160 (27-121)||(17301-17394)
[»] scaffold0048 (1 HSPs)
scaffold0048 (27-121)||(51825-51916)
[»] scaffold0001 (1 HSPs)
scaffold0001 (43-102)||(427263-427321)
[»] scaffold0210 (1 HSPs)
scaffold0210 (27-121)||(8171-8264)
[»] scaffold0121 (1 HSPs)
scaffold0121 (204-295)||(47321-47409)


Alignment Details
Target: chr4 (Bit Score: 242; Significance: 1e-134; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 31093065 - 31093401
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  31093065 acacccctaaaaaactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttatagcc 31093163  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttat 201  Q
    ||||||||||  ||||||||| ||||||||||||| | ||||||||||||||||| |||||||| |||||||||||||||  |||||||| ||||||||     
T  31093164 taaaacaagtcataggtcattaatacagtcaatgagatcgtgttagtggttgtaaccgtccaaacccacaataatggctctgaatctttccggagtttac 31093263  T
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||| || ||||| ||||||||||||||||||||    
T  31093264 attccggaatgtccttagccctacaggaagtgccaacttttctctcgttcaccaccattatcgcattaatccggaaaatatattccggaaaacaggtgtg 31093363  T
Q  302 catttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  31093364 cattccagagtttatattccggaatgcatcagtcatgg 31093401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 5 - 339
Target Start/End: Original strand, 35158681 - 35159013
Alignment:
Q  5 cccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaa 104  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  35158681 cccctaaaaaactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttatagcctaa 35158779  T
Q  105 aacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttatatt 204  Q
    ||||||| |||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||||||||  |||||||| |||||||| |||    
T  35158780 aacaagtcctaggtcattaatacagtaaatgaaaacgtgttagtggttctaaccgtccaaacccacaataatggctctgaatctttccggagtttacatt 35158879  T
Q  205 ccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcat 304  Q
    || ||||||||||||||||||| |||||||||| ||||||||||||| | ||||||||||||||||| || ||||| |||||| ||||||||||||||||    
T  35158880 ccggaatgtccttagccctacaggaagtgccaacttttctctcgttcgccaccattatcgcattaatccggaaaatatattcc-gaaaacaggtgtgcat 35158978  T
Q  305 ttcagattttatattccggaatgcatcagtcatgg 339  Q
    | | ||||| |||||||||||||||||||||||||    
T  35158979 tccggatttaatattccggaatgcatcagtcatgg 35159013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 1602743 - 1603078
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||    
T  1602743 acacccctaaaaaactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatgaaagcctatttatagcc 1602841  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttat 201  Q
    |||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||| ||||| |||  |||||||| ||| ||||     
T  1602842 taaaacaagtcctaggtcattaatacagtcaat-aaaacgtgttagtggttgtaaccgtccaaatccacattaatgactctgaatctttccggattttac 1602940  T
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||||| ||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| || ||||| ||||||||||||||||||||    
T  1602941 attccggaatgtccttagccctacatgaagtgccaatttttccctcgttcaccaccattatcgcattaatccggaaaatatattccggaaaacaggtgtg 1603040  T
Q  302 catttcagattttatattccggaatgcatcagtcatgg 339  Q
    | || | ||||||||||||||||||||||||| |||||    
T  1603041 ctttccggattttatattccggaatgcatcagacatgg 1603078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 30003570 - 30003908
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  30003570 acacccctaaaaaactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttatagcc 30003668  T
Q  102 taa--aacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagttt 199  Q
    |||  ||||||| |||||||||| ||||||||||||||||||||||| || |||||| |||||||| ||||||||||| |||  |||||||| |||||||    
T  30003669 taataaacaagtcctaggtcattaatacagtcaatgaaaacgtgttattgcttgtaaccgtccaaacccacaataatgactctgaatctttccggagttt 30003768  T
Q  200 atattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtg 299  Q
    | ||||| ||||||||||| ||||||| |||||||||| ||||||||||||||| ||||||||||||||||| |||||||| ||||||| |||||| |||    
T  30003769 acattccggaatgtccttatccctacaggaagtgccaacttttctctcgttcaccaccattatcgcattaatccgaaaaatatattccgaaaaacaagtg 30003868  T
Q  300 tgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||||| | |||||||||||||||||||||||||||||||    
T  30003869 tgcattccggattttatattccggaatgcatcagtcatgg 30003908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 33281046 - 33281378
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||    
T  33281046 acacccttaaaaaactaaaaa-catttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatgtaagcctatttatagcc 33281143  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttat 201  Q
    ||||||||||  ||||||||| ||||| ||||||||||||||||||||||||||| |||||||| ||||| |||||||||  |||||||||||| ||||     
T  33281144 taaaacaagtcttaggtcattaatacaatcaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatggctctgaatctttctggattttac 33281243  T
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||||| ||||||||||||||||||| |||||||||| |||||||||||||   ||||||||||||||||| || ||||| ||||||| ||||||| | ||    
T  33281244 attccggaatgtccttagccctacaggaagtgccaacttttctctcgttc---accattatcgcattaatccggaaaatatattccgaaaaacagatatg 33281340  T
Q  302 catttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  33281341 catttcggattttatattccggaatgcatcagtaatgg 33281378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 2 - 347
Target Start/End: Complemental strand, 52417112 - 52416768
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||    
T  52417112 acacccctaaaaaactagaaaacatttgaagaaaatgtaagaaaagaggtgaagtgaagaat-gagggtatttgttgaagatggaagcctatttatagcc 52417014  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtgg---ttgtaatcgtccaaatccacaataatggctcataatctttctggagtt 198  Q
    ||||||||||  ||||||||| |||||||||||||||||||||||||||   |||||| |||||||| ||||| |||||||||  |||||||| ||| ||    
T  52417013 taaaacaagtcttaggtcattaatacagtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatggctctgaatctttccggaatt 52416914  T
Q  199 tatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggt 298  Q
    || |||||  || | ||||||||||| | |||||| ||| |||||||||||||   ||||||||||||||||| || ||||| |||| |||||||||| |    
T  52416913 tacattccgaaacgcccttagccctataggaagtgtcaacttttctctcgttc---accattatcgcattaatccggaaaatatatttcggaaaacagat 52416817  T
Q  299 gtgcatttcagattttatattccggaatgcatcagtcatggtctgtggt 347  Q
    ||||||| | |||||||||||||||||||||| |||||||||| |||||    
T  52416816 gtgcattccggattttatattccggaatgcattagtcatggtcggtggt 52416768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 2 - 339
Target Start/End: Complemental strand, 28780954 - 28780618
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||    
T  28780954 acacccctaaaaaactaaaaaacatttgaagaaaatgtaagaaaagaggtgatgtgaagaat-gaaggtatttgttgaagatggaagcctatttatagcc 28780856  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttat 201  Q
    ||||||||||  || |||||| ||||||||||||||||||||||||||||||||| || ||||| ||||| |||||||||  ||||||||  || |||||    
T  28780855 taaaacaagtcatatgtcattaatacagtcaatgaaaacgtgttagtggttgtaaccgcccaaaaccacattaatggctctgaatctttccagattttat 28780756  T
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||||| ||||||||||||||||||| |||||||||||||||  ||||||| | |||||||||||||||||  | ||||  ||||||||||||||  ||||    
T  28780755 attccggaatgtccttagccctacaggaagtgccaattttttcctcgttcgccaccattatcgcattaatcaggaaaacatattccggaaaacatatgtg 28780656  T
Q  302 catttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||| | || | || |||| | ||||||||||| ||||    
T  28780655 cattccggaatgtagattctgaaatgcatcagtgatgg 28780618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 14 - 347
Target Start/End: Original strand, 45462222 - 45462540
Alignment:
Q  14 aactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtac 113  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||  |||| ||||||||||||||| ||| ||||||||||||||||||||||      
T  45462222 aactaacaaacatttgaagaaaatggaagaaaataggtgaagtgaagaat-gaagatatttgttgaagatgaaagtctatttatagcctaaaacaagtca 45462320  T
Q  114 taggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttatattccagaatgt 213  Q
    ||| ||||| ||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||  |||||||| |||||||| ||||| ||||||    
T  45462321 tagatcattaatacagtcaatgaaaacgtgtcagtggttgtaaccgtccaaacccacaataatggctctgaatctttccggagtttacattccggaatgt 45462420  T
Q  214 ccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagattt 313  Q
    ||||||||||||| |||||||||| | ||||||||||||| ||||||||||||||||              ||||||||| ||||||||||| | |||||    
T  45462421 ccttagccctacaggaagtgccaactcttctctcgttcaccaccattatcgcattaa--------------tccggaaaagaggtgtgcattccggattt 45462506  T
Q  314 tatattccggaatgcatcagtcatggtctgtggt 347  Q
    |||||||||||||||||||||||||||| |||||    
T  45462507 tatattccggaatgcatcagtcatggtcggtggt 45462540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 45229028 - 45229364
Alignment:
Q  2 acacccctaaataactaaaaaac-atttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagc 100  Q
    ||||||||||| ||||||||||  |||||||||||||| |||||||||||||| ||||||||  |||  |||||||||||||||||| ||||||||||||    
T  45229028 acacccctaaaaaactaaaaaaatatttgaagaaaatgtaagaaaagaggtgatgtgaagaat-gaatatatttgttgaagatggaatcctatttatagc 45229126  T
Q  101 ctaaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagttta 200  Q
    ||||||||||| |||||||||| |||||||| |||||||||||||||||||||||| |||||||| ||||| |||||||||  |||||||| ||| ||||    
T  45229127 ctaaaacaagtcctaggtcattaatacagtccatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatggctctgaatctttccggatttta 45229226  T
Q  201 tattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgt 300  Q
    |||||| |||||||||||||| |||| |||||| ||| ||||| ||||||||| || ||||||||||||||||| ||||  |||||| |||| ||| |||    
T  45229227 tattccggaatgtccttagccatacaggaagtg-caacttttccctcgttcaccactattatcgcattaattcggaaaacatattccagaaagcagatgt 45229325  T
Q  301 gcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    |  ||   |||| ||||||||||||||||||||||||||    
T  45229326 gtgttctggattgtatattccggaatgcatcagtcatgg 45229364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 49374278 - 49374609
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||  || ||| ||||||||||||||||||||||||||||||    
T  49374278 acacccctaaaaaactaaaaa-catttgaagaaaatggaagaaaagaggtgaagtgaagaatgga-ggtttttgttgaagatggaagcctatttatagcc 49374375  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttat 201  Q
    ||||||||||  ||||||||| |||||||||||||||||||||||||||||||||  ||||||| ||||| |||||||||  |||||||| ||| ||||     
T  49374376 taaaacaagtcataggtcatt-atacagtcaatgaaaacgtgttagtggttgtaactgtccaaacccacattaatggctctgaatctttccggattttac 49374474  T
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||||  |||  || ||||||||||| |||||| ||| ||||| |||||   | ||||||||| ||||||| || ||||| ||||||||||||||| ||||    
T  49374475 attctggaacatcgttagccctacaggaagtgtcaacttttccctcgt---ccaccattatcacattaatccggaaaatatattccggaaaacagatgtg 49374571  T
Q  302 catttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||| | ||||||||| ||||||||||||||| |||||    
T  49374572 cattccggattttatactccggaatgcatcagccatgg 49374609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 2 - 339
Target Start/End: Complemental strand, 9036278 - 9035943
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| |||||||||||||||||| |||||| ||||||||||||||| |||||||  ||| |||||||||||||||| ||||||||||||||||    
T  9036278 acacccctaaaaaactaaaaaacatttgaataaaatgtaagaaaagaggtgaaatgaagaat-gaatgtatttgttgaagatgaaagcctatttatagcc 9036180  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgt---aatcgtccaaatccacaataatggctcataatctttctggagtt 198  Q
    ||||| |||| ||| |||||| |||||||||||||||||||||||||||||||   || |||||||| ||||| ||||| |||  |||||||   || ||    
T  9036179 taaaa-aagtcctaagtcattaatacagtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatgactctgaatctttaaagattt 9036081  T
Q  199 tatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggt 298  Q
    || |||||| || | |||||||||||||| ||||| ||| |||||||||||||||   ||||||||||||||| || ||||| ||||||||||||||| |    
T  9036080 tacattccaaaacgcccttagccctacaaaaagtgtcaacttttctctcgttcac---cattatcgcattaatccggaaaatatattccggaaaacagat 9035984  T
Q  299 gtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    ||||||| | ||||||||||||| |||||||||||||||||    
T  9035983 gtgcattccggattttatattccagaatgcatcagtcatgg 9035943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 16023832 - 16024160
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    |||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||    
T  16023832 acacccctaaaacactaaaaaacatttgaagaaaatgtaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaatatggaagcctatttatagcc 16023930  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttat 201  Q
    ||||||||||  ||||| ||| |||||||||||||||||||||||||||||| || |||||||| ||||| ||||| |||  |||||||| ||| ||||     
T  16023931 taaaacaagtcataggttattaatacagtcaatgaaaacgtgttagtggttgcaaccgtccaaacccacattaatgactctgaatctttccggattttac 16024030  T
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||||| ||||||||||||||||| | ||||||||||  |||  ||||||||| ||||||||||||||||| || ||||| |||        |||| ||||    
T  16024031 attccggaatgtccttagccctataggaagtgccaacattttcctcgttcaccaccattatcgcattaatccggaaaatatat--------acagatgtg 16024122  T
Q  302 catttcagattttatattccggaatgcatcagtcatgg 339  Q
    | || | |||| ||||||||||||||||||||||||||    
T  16024123 ctttccggattatatattccggaatgcatcagtcatgg 16024160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 2 - 302
Target Start/End: Complemental strand, 38218446 - 38218142
Alignment:
Q  2 acacccctaaataactaaaaaa--catttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatag 99  Q
    ||||||||||| ||||||||||  ||||||||||||||| || ||||||||||||||||||||  | |||||||||||||||||||||||||||||||||    
T  38218446 acacccctaaaaaactaaaaaaaacatttgaagaaaatgtaaaaaaagaggtgaagtgaagaat-gtaggtatttgttgaagatggaagcctatttatag 38218348  T
Q  100 cctaaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtgg---ttgtaatcgtccaaatccacaataatggctcataatctttctggag 196  Q
     ||||||||||| |||||||||| |||||||||||||||||||||||||||   ||||||||||||||| ||||| || ||||||  || ||||| |||     
T  38218347 gctaaaacaagttctaggtcattaatacagtcaatgaaaacgtgttagtggttgttgtaatcgtccaaacccacattagtggctctaaacctttccggat 38218248  T
Q  197 tttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacag 296  Q
    |||| ||||| ||||||||||||||||| | |||||||||| ||||| ||||||||| |||||||||||||||||||| ||||| |||| || |||||||    
T  38218247 tttacattccggaatgtccttagccctataggaagtgccaacttttccctcgttcaccaccattatcgcattaattcggaaaatatatttcgaaaaacag 38218148  T
Q  297 gtgtgc 302  Q
     |||||    
T  38218147 atgtgc 38218142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 25 - 332
Target Start/End: Original strand, 40728008 - 40728314
Alignment:
Q  25 atttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcattga 124  Q
    |||||||||||||| |||||||||||||| ||||||||  |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |    
T  40728008 atttgaagaaaatgtaagaaaagaggtgatgtgaagaat-gaaggtatttgttgaagatgaaagcctatttatagcctaaaacaagtcctaggtcattaa 40728106  T
Q  125 tacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttatattccagaatgtccttagcccta 224  Q
    |||||||||||||||||||||||||||||||| | |||| | ||||| ||||||||   |||||||| ||| |||||||||| |||||||||||||||||    
T  40728107 tacagtcaatgaaaacgtgttagtggttgtaaccatccatacccacattaatggctatgaatctttccggattttatattccggaatgtccttagcccta 40728206  T
Q  225 caagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagattttatattccgga 324  Q
    || |||||||||| ||||  ||||||||| |||||||||| |||||| || ||||  ||||||| ||||||  |||||||| | || | || ||||||||    
T  40728207 caggaagtgccaactttttcctcgttcaccaccattatcgtattaatccggaaaacatattccgtaaaacatatgtgcattccggaatgtagattccgga 40728306  T
Q  325 atgcatca 332  Q
    ||||||||    
T  40728307 atgcatca 40728314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 55136624 - 55136962
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||    
T  55136624 acacccctaaaaaactaaaaaacatttgacgaaaatgtaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatgaaagcctatttatagcc 55136722  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtg---gttgtaatcgtccaaatccacaataatggctcataatctttctggagtt 198  Q
    ||||||||||  ||||||||| ||||| ||||||| ||||||||||||   ||||||| |||||||| ||||| |||||| |   |||||||  | | ||    
T  55136723 taaaacaagtcataggtcattaatacaatcaatgataacgtgttagtggttgttgtaaccgtccaaacccacattaatggatttgaatcttttcgaattt 55136822  T
Q  199 tatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggt 298  Q
    || ||||| ||| | |||||||||| || |||||| ||| ||||| ||| ||||| ||||||||| ||||||| || ||||| |||||||| ||| || |    
T  55136823 tacattccggaacgcccttagccctgcaggaagtgtcaacttttccctctttcaccaccattatcacattaatccggaaaatatattccgg-aaatagat 55136921  T
Q  299 gtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  55136922 gtgcatttcagattttatattccggaatgcatcagtcatgg 55136962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 2 - 339
Target Start/End: Complemental strand, 2013911 - 2013558
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||    
T  2013911 acacccctaaaaaactaaaaa-catttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagccaatttatagcc 2013814  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctc------------at------ 183  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||            ||          
T  2013813 taaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgtaaccgtccaaatccacattaatgactctctttcaaaagaatccaatg 2013714  T
Q  184 ---aatctttctggagtttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaat 280  Q
       |||||||| ||| |||| ||||  || |||||||||||||||||||| |||||||||||| |||| ||   |||||||||||||||||| | |||||    
T  2013713 ccgaatctttcaggattttacattctggagtgtccttagccctacaagaaatgccaatttttccctcgctc---accattatcgcattaatttggaaaat 2013617  T
Q  281 ctattccggaaaacaggtgtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
      ||||||||||| |  |||||||||| ||||||||||||| |||||||||||||||||    
T  2013616 aaattccggaaaatacatgtgcatttcggattttatattccagaatgcatcagtcatgg 2013558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 5 - 339
Target Start/End: Complemental strand, 56463818 - 56463490
Alignment:
Q  5 cccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaa 104  Q
    |||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  56463818 cccctaaaaaactaaaaaacatttgaagaaaatgtaagaaaataggtgaagtgaag--------gtatttgttgaagatggaagcctatttatagcctaa 56463727  T
Q  105 aacaagtactaggtcattgatacagtcaatgaaaacgtgttagtgg---ttgtaatcgtccaaatccacaataatggctcataatctttctggagtttat 201  Q
    ||||||| |  ||||||| |||||||||||||||| ||||||||||   |||||| |||||||| ||||| |||||||||  | |||||| ||| ||||     
T  56463726 aacaagtccacggtcattaatacagtcaatgaaaatgtgttagtggttgttgtaaccgtccaaacccacattaatggctccgagtctttccggattttac 56463627  T
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    |||||| || |||||||||| || | |||||| |||  |||| ||||||||| |||||||||||||||||  ||||||| ||||||||||||||| ||||    
T  56463626 attccaaaacgtccttagccttataggaagtgtcaa-ctttccctcgttcaccaccattatcgcattaatctgaaaaatatattccggaaaacagatgtg 56463528  T
Q  302 catttcagattttatattccggaatgcatcagtcatgg 339  Q
    | || |  ||| ||||||||||||||||||||||||||    
T  56463527 ctttccgaattatatattccggaatgcatcagtcatgg 56463490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 2 - 347
Target Start/End: Original strand, 6963414 - 6963775
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  6963414 acacccctaaaaaactaaaaat-atttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttatagcc 6963511  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctc---------ataatc----- 187  Q
    ||||| |||| ||||||||||  || |||||||||||| ||||||||| |||||| |||||||| ||||| |||||||||         | ||||         
T  6963512 taaaataagtcctaggtcattactatagtcaatgaaaatgtgttagtgattgtaaccgtccaaacccacattaatggctctctttcaaaagaatccaatg 6963611  T
Q  188 -------tttctggagtttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaat 280  Q
           |||| ||| |||| ||||| ||| | |||||||||||||||||||| ||| ||||| |||||||   ||||| ||||||||||| || |||||    
T  6963612 ctgaaactttccggattttacattccggaacgcccttagccctacaagaagtgtcaacttttccctcgttc---accatcatcgcattaatccgtaaaat 6963708  T
Q  281 ctattccggaaaacaggtgtgcatttcagattttatattccggaatgcatcagtcatggtctgtggt 347  Q
     ||||||||||||||  |||||||| || |||||||||||||||||||||||||||||||| |||||    
T  6963709 atattccggaaaacatatgtgcattccatattttatattccggaatgcatcagtcatggtcggtggt 6963775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 8 - 312
Target Start/End: Complemental strand, 43842050 - 43841744
Alignment:
Q  8 ctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaac 107  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||||||| |||||||  ||| |||||||||||||||| ||| ||||||||||||||||||    
T  43842050 ctaaaaaactaaaaaacatttgaagaaaatgtaagaaaataggtgaattgaagaat-gaatgtatttgttgaagatgaaagtctatttatagcctaaaac 43841952  T
Q  108 aagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgt---aatcgtccaaatccacaataatggctcataatctttctggagtttatatt 204  Q
    ||||  ||||||||| ||||||||||| ||||||| |||||||||||   || |||||||| ||||| ||||||||   |||||||| ||| |||| |||    
T  43841951 aagtcataggtcattaatacagtcaattaaaacgtcttagtggttgttgtaaccgtccaaacccacattaatggctatgaatctttccggattttacatt 43841852  T
Q  205 ccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcat 304  Q
    || ||||||| |||||| || | |||||||||| ||||| ||||||||| ||||||||||||||||| || ||||| ||||| | ||||||| ||||| |    
T  43841851 ccggaatgtcattagccttataggaagtgccaacttttccctcgttcacgaccattatcgcattaatccggaaaatatattctgaaaaacagatgtgctt 43841752  T
Q  305 ttcagatt 312  Q
    ||| ||||    
T  43841751 ttcggatt 43841744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 2 - 279
Target Start/End: Original strand, 51538604 - 51538881
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    |||||| |||| |||||||||| ||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||    
T  51538604 acacccttaaaaaactaaaaaatatttgaaaaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagcatatttatagcc 51538702  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttat 201  Q
    |||||||||| ||| |||||| ||||||||||||||||| |||| ||||||| ||  ||||||| ||||| ||||||| |  |||||||| ||| ||||     
T  51538703 taaaacaagtcctaagtcattaatacagtcaatgaaaacatgttggtggttgcaactgtccaaacccacattaatggccctgaatctttccggattttac 51538802  T
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttc-acaaccattatcgcattaattcgaaaaa 279  Q
    ||||| ||||||||||||||||||| ||||||| || ||||| |||  || |  ||||||||||||| ||| |||||||    
T  51538803 attccggaatgtccttagccctacaggaagtgcaaacttttccctccctcgatcaccattatcgcatcaatccgaaaaa 51538881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 2 - 339
Target Start/End: Complemental strand, 168718 - 168365
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| |||||||||  |||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||| |    
T  168718 acacccctaaaaaactaaaaat-atttgaagaaaagggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaaggctatttatagtc 168621  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctc---------ataatc----- 187  Q
    ||||||||||  ||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| || ||||||         | ||||         
T  168620 taaaacaagtcataggtcattaatacagtcaatgaaaacgtgttagtggttgtaaacgtccaaacccacattagtggctctctttcaaaagaatccaatg 168521  T
Q  188 -------tttctggagtttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaat 280  Q
           |||| ||| |||| ||||| ||| | ||||| ||||||| |||||||||| ||||| |||||||   ||||||||||||||||| || |||||    
T  168520 ttgaagctttccggattttacattccggaacgcccttaaccctacaggaagtgccaacttttccctcgttc---accattatcgcattaatccggaaaat 168424  T
Q  281 ctattccggaaaacaggtgtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
     ||||| ||||| ||  ||||||||||||||||||||||| ||||||| ||||||||||    
T  168423 atattctggaaaccacatgtgcatttcagattttatattctggaatgcttcagtcatgg 168365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 4190052 - 4189879
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  4190052 acacccctaaaaaactaaaaa-catttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttatagcc 4189955  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatg 177  Q
    |||||||||| |||||||||| ||| ||||||| ||||||||||||||||||||| |||||||| ||||| |||||    
T  4189954 taaaacaagtcctaggtcattaatatagtcaataaaaacgtgttagtggttgtaaccgtccaaacccacattaatg 4189879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 2 - 334
Target Start/End: Complemental strand, 38551446 - 38551100
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| |||||||   ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  38551446 acacccctaaaaaactaaa---catttgaagaaaatggaagaaaagatgtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttatagcc 38551351  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctc---------ataatc----- 187  Q
    |||||||||| ||||||||||  |||||||||||||||||||||||||||||||| |||||||| | ||| |||||||||         | ||||         
T  38551350 taaaacaagtcctaggtcattagtacagtcaatgaaaacgtgttagtggttgtaaccgtccaaacctacattaatggctctctttcaaaagaatccaatg 38551251  T
Q  188 -------tttctggagtttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaat 280  Q
           |||| ||| |||| ||||| ||| ||||||| |||||||||||||||||| ||||| |||||||   |||||||||| |||||| || |||||    
T  38551250 ctgaagctttccggattttagattccggaacgtccttaaccctacaagaagtgccaacttttccctcgttc---accattatcgtattaatccggaaaat 38551154  T
Q  281 ctattccggaaaacaggtgtgcatttcagattttatattccggaatgcatcagt 334  Q
     |||| |||||||||   ||||||| || ||||||| || ||||||||||||||    
T  38551153 atatttcggaaaacaaaggtgcattccaaattttatttttcggaatgcatcagt 38551100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 2 - 181
Target Start/End: Original strand, 45924558 - 45924735
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||  ||||||||||||||||||| ||| |||||||||||||    
T  45924558 acacccctaaataactaaaaa-catttgaagaaaatggaagaaaagaggttaagtgaggaat-gaaggtatttgttgaagattgaaacctatttatagcc 45924655  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctc 181  Q
    ||||||||||  ||||||||| |||||||||||||||||||||||||||||| || |||||||| ||||| |||||||||    
T  45924656 taaaacaagtcataggtcattaatacagtcaatgaaaacgtgttagtggttgcaaccgtccaaacccacattaatggctc 45924735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 4048093 - 4048254
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    |||| |||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  4048093 acactcctaaaaaactaaaaa-cattagaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttatagcc 4048190  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaa 165  Q
    |||||||||| |||||| ||| ||||| ||||||||||||||||||||||||||| ||||||||    
T  4048191 taaaacaagtcctaggttattaatacaatcaatgaaaacgtgttagtggttgtaaccgtccaaa 4048254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 2 - 181
Target Start/End: Complemental strand, 15543018 - 15542842
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  15543018 acacccttaaaaaactaaaaa-catttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttatagcc 15542921  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctc 181  Q
    |||||||||| ||||||||||  || ||||||||||||||||||||| ||| ||| |||||||| ||||| |||| ||||    
T  15542920 taaaacaagtcctaggtcattactatagtcaatgaaaacgtgttagt-gttttaaccgtccaaacccacattaattgctc 15542842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 16451890 - 16452051
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| |||||| || |||||||||||||| ||||||||||||||||||||||||  |||||||| || |||||||||||||||||||||||||    
T  16451890 acacccctaaaaaactaagaa-catttgaagaaaattgaagaaaagaggtgaagtgaagaat-gaaggtatctgctgaagatggaagcctatttatagcc 16451987  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaa 165  Q
    |||||||||| |||| |||||  |||||||||||||||||||||||||||||||| ||| ||||    
T  16451988 taaaacaagtcctagatcattactacagtcaatgaaaacgtgttagtggttgtaaccgttcaaa 16452051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 28311069 - 28310895
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||| ||||| |||||||||||| |||||||||||| |||||||  |||||||||||||||||||||||||||||||||||      
T  28311069 acacccctaaaaaactaaaaa-catttcaagaaaatggaataaaagaggtgaaatgaagaat-gaaggtatttgttgaagatggaagcctatttatagta 28310972  T
Q  102 taaaacaa-gtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatg 177  Q
    |||||||| ||  ||||||||| |||| |||||||||||||||||||||||||||| ||| |||| ||||| |||||    
T  28310971 taaaacaaagtcttaggtcattaatacggtcaatgaaaacgtgttagtggttgtaaccgttcaaacccacattaatg 28310895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 19 - 165
Target Start/End: Complemental strand, 35320058 - 35319913
Alignment:
Q  19 aaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggt 118  Q
    ||||||||||||||||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||||||||||||||| ||||||||||  |||||    
T  35320058 aaaaacatttgaagaaaatggaagaaaagaggtgaagtggagaat-gaaagtatttgttgaagatggaagcctatttatagcttaaaacaagtcataggt 35319960  T
Q  119 cattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaa 165  Q
    ||||  || ||| ||||||||||||||||| ||||||| ||||||||    
T  35319959 cattactatagttaatgaaaacgtgttagtagttgtaaccgtccaaa 35319913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 211 - 339
Target Start/End: Original strand, 45924786 - 45924911
Alignment:
Q  211 tgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcaga 310  Q
    |||||||||||||||| |||||||||| ||||| |||||||||   ||||||||||||||| || |||||  |||||||||||||| |||||||| | ||    
T  45924786 tgtccttagccctacaggaagtgccaacttttccctcgttcac---cattatcgcattaatccggaaaataaattccggaaaacagatgtgcattccgga 45924882  T
Q  311 ttttatattccggaatgcatcagtcatgg 339  Q
    |||||||||| ||||||||||||||||||    
T  45924883 ttttatattctggaatgcatcagtcatgg 45924911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 212 - 339
Target Start/End: Complemental strand, 4189823 - 4189699
Alignment:
Q  212 gtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagat 311  Q
    |||||| ||||||||||||||||||| ||||| |||||||||   ||||||||||||||| || ||||| ||||||||||||||| ||| |||| | |||    
T  4189823 gtcctttgccctacaagaagtgccaacttttccctcgttcac---cattatcgcattaatccggaaaatatattccggaaaacagatgttcattccggat 4189727  T
Q  312 tttatattccggaatgcatcagtcatgg 339  Q
    |||||| ||| |||||||||||||||||    
T  4189726 tttatactccagaatgcatcagtcatgg 4189699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 214 - 339
Target Start/End: Complemental strand, 35319844 - 35319722
Alignment:
Q  214 ccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagattt 313  Q
    ||||||||||||| |||||| ||| |||||||||||||||   ||||||||||||||| || ||||| |||| || ||||||| |||||||| | |||||    
T  35319844 ccttagccctacaggaagtgtcaacttttctctcgttcac---cattatcgcattaatccggaaaatatatttcgaaaaacagatgtgcattccggattt 35319748  T
Q  314 tatattccggaatgcatcagtcatgg 339  Q
    |||||| |||||||||| ||||||||    
T  35319747 tatatttcggaatgcattagtcatgg 35319722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 202 - 339
Target Start/End: Original strand, 4048312 - 4048444
Alignment:
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||||| ||| ||||||||||||||||||||||| ||  ||||||||||||||   ||| |||| |||||| || ||||| |||||||||||| | |||      
T  4048312 attccggaacgtccttagccctacaagaagtgcaaacatttctctcgttcac---catcatcgtattaatccggaaaatatattccggaaaaaaagtg-- 4048406  T
Q  302 catttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||| | |||||||||||||||||||||||||||||||    
T  4048407 cattacggattttatattccggaatgcatcagtcatgg 4048444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 39807432 - 39807350
Alignment:
Q  26 tttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaa 109  Q
    ||||||||||||| |||||||||||||||||||||||  ||||| |||||||||||||| ||||||||||||||| ||||||||    
T  39807432 tttgaagaaaatgtaagaaaagaggtgaagtgaagaat-gaaggaatttgttgaagatgaaagcctatttatagcgtaaaacaa 39807350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 20516650 - 20516734
Alignment:
Q  27 ttgaagaaaatggaagaaaagaggtgaagtgaagaaca--gaaggtatttgttgaagatggaagcctatttatagcctaaaacaa 109  Q
    |||||||||| | ||||||||||||||||||| ||| |  ||||| |||||||||||||| ||||||||||||||||||||||||    
T  20516650 ttgaagaaaaagtaagaaaagaggtgaagtgatgaagaatgaaggaatttgttgaagatgcaagcctatttatagcctaaaacaa 20516734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 27 - 121
Target Start/End: Original strand, 40602725 - 40602818
Alignment:
Q  27 ttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcat 121  Q
    |||||||||| | |||||||||||||||||||||||  |||||  ||||||||||||| ||||||||||||||| | |||||||| |||| ||||    
T  40602725 ttgaagaaaaagtaagaaaagaggtgaagtgaagaat-gaaggagtttgttgaagatgtaagcctatttatagcattaaacaagtcctagatcat 40602818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 347
Target Start/End: Complemental strand, 28310849 - 28310721
Alignment:
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||   |||||||||| |||||              ||||||||||||  |||    
T  28310849 attccagaacgtccttagccctacaagaagtgccaacttttctctcgttc---accattatcgtattaa--------------tccggaaaacagaagtg 28310767  T
Q  302 catttcagattttatattccggaatgcatcagtcatggtctgtggt 347  Q
    |||| | |||||||||||||  |||||||||||||||||| |||||    
T  28310766 cattccggattttatattccataatgcatcagtcatggtcggtggt 28310721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 145
Target Start/End: Complemental strand, 34953705 - 34953601
Alignment:
Q  40 aagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcattgatacagtcaatgaaaa 139  Q
    ||||||| ||||||||||||||| | |||   ||||||||||||| || |||||||||||||||||| |||| |||| ||||   |||||||||  ||||    
T  34953705 aagaaaaaaggtgaagtgaagaata-aagaagtttgttgaagatgcaaacctatttatagcctaaaataagtcctagatcataactacagtcaaataaaa 34953607  T
Q  140 cgtgtt 145  Q
    ||||||    
T  34953606 cgtgtt 34953601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 339
Target Start/End: Complemental strand, 15542759 - 15542675
Alignment:
Q  255 accattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    ||||| |||||||||||    ||||| ||||| ||||||||| ||| |||| |||||||||| ||||| ||||||||||||||||    
T  15542759 accataatcgcattaatcttgaaaatatattctggaaaacagatgtacattccagattttattttccgaaatgcatcagtcatgg 15542675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 291
Target Start/End: Original strand, 16452120 - 16452195
Alignment:
Q  213 tccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaa 291  Q
    ||||||||||||||||||||| ||| ||||| |||||||   |||||||||| |||||| | |||||| || |||||||    
T  16452120 tccttagccctacaagaagtgtcaacttttccctcgttc---accattatcgtattaatacaaaaaatataatccggaa 16452195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 49604462 - 49604553
Alignment:
Q  7 cctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatag 99  Q
    |||||| ||||||||||   || || |||| | |||||||||||||||||||  ||  ||||| |||||||||||||| ||||||||||||||    
T  49604462 cctaaaaaactaaaaaaatgttaaataaaaagtaagaaaagaggtgaagtgatcaat-gaaggaatttgttgaagatgcaagcctatttatag 49604553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 56084099 - 56084189
Alignment:
Q  30 aagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcat 121  Q
    ||||||| | ||||||||| | |||||||||||  ||| | |||||||||| ||| |||| |||||||||||| |||||||| |||| ||||    
T  56084099 aagaaaaagtaagaaaagatgagaagtgaagaat-gaatgaatttgttgaatatgcaagcatatttatagccttaaacaagtcctagatcat 56084189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 234; Significance: 1e-129; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 2 - 339
Target Start/End: Complemental strand, 39318774 - 39318438
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||    
T  39318774 acacccctaaaaaactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaataat-gaaggtatttgttgaagatggaagcctatttatagcc 39318676  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttat 201  Q
    ||||||||||  ||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||  |||||||| ||||||||     
T  39318675 taaaacaagtcataggtcattaatacagtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacaataatggctctgaatctttccggagtttac 39318576  T
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    |||||||||||||||||||||||||  ||||||||| |||||||| |||||| ||||||||||||||||| |||||||| | ||| |||||||||||| |    
T  39318575 attccagaatgtccttagccctacagtaagtgccaacttttctcttgttcaccaccattatcgcattaatccgaaaaatattttctggaaaacaggtggg 39318476  T
Q  302 catttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||| | |||||||||||||||||||||||||||||||    
T  39318475 cattccggattttatattccggaatgcatcagtcatgg 39318438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 11076187 - 11076523
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||| ||||||| |||||||||| |    
T  11076187 acacccctgaaaaactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaatt-aaggtatttgttgaaaatggaagtctatttatagtc 11076285  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttat 201  Q
    |||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||  |||||||| | ||||||     
T  11076286 taaaacaagtcctaggtcattaatacagtcaataaaaacgtgttagtggttgtaaccgtccaaacccacaataatgactctgaatctttccgaagtttac 11076385  T
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||| |||||||| |||||||||| |||||||||    
T  11076386 attccggaatgtccttagccctacaggaagtgccaacttttctctcgttcaccaccattatcgcattaatccgaaaaatatattccggaacacaggtgtg 11076485  T
Q  302 catttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||||| |||||||||||||||||||||||||||||||    
T  11076486 catttcggattttatattccggaatgcatcagtcatgg 11076523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 2 - 347
Target Start/End: Complemental strand, 40105427 - 40105084
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||| ||||||||||||||||    
T  40105427 acacccctaaa-aactaaaaaacatttgaagaaaatggaagaaaagaggtgaattgaagaat-gaaggtatttgttgaagatgaaagcctatttatagcc 40105330  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttat 201  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||  |||||||| ||||||||     
T  40105329 taaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgcaaccgtccaaacccacaataatgactctgaatctttccggagtttac 40105230  T
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| || || ||||| |||||  |||||||||||||    
T  40105229 attccggaatgtccttagccctacaggaagtgccaacttttctctcgttcaccaccattatcgcattgatccggaaaatatattctagaaaacaggtgtg 40105130  T
Q  302 catttcagattttatattccggaatgcatcagtcatggtctgtggt 347  Q
    |||| | ||||||||||||||||||||||||||||||||| |||||    
T  40105129 cattccggattttatattccggaatgcatcagtcatggtcggtggt 40105084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 2 - 338
Target Start/End: Complemental strand, 8240166 - 8239832
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  8240166 acacccctaaaaaactaaaaaacatttgaagaaaatggaagaaaaaaggtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttatagcc 8240068  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttat 201  Q
    |||||||||| ||| || ||| ||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||  |||||||| ||||||||     
T  8240067 taaaacaagtcctatgttattaatacagttaatgaaaacgtgttagtggttgtaaccgtccaaacccacaataatggctctgaatctttccggagtttac 8239968  T
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||| | ||||||||||||||||||| ||||||||||  |||||||||||||| ||||||||||||||||| || ||||| |||||||||||| |||||||    
T  8239967 atttcggaatgtccttagccctacaggaagtgccaa-gtttctctcgttcaccaccattatcgcattaatccggaaaatatattccggaaaataggtgtg 8239869  T
Q  302 catttcagattttatattccggaatgcatcagtcatg 338  Q
    |||| | |||||||||||  |||||||||||||||||    
T  8239868 cattccggattttatattttggaatgcatcagtcatg 8239832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 4 - 339
Target Start/End: Complemental strand, 35684192 - 35683858
Alignment:
Q  4 acccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagccta 103  Q
    ||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  35684192 acccctaaaaaactaaaaaacatttgaagaaaatggaagaaaattggtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttatagccta 35684094  T
Q  104 aaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttatat 203  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||  |||||||| |||||||| ||    
T  35684093 aaacaagtactgggtcattaaaacagtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacaataatggctctgaatctttccggagtttaaat 35683994  T
Q  204 tccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgca 303  Q
    ||| ||||||| ||||||||||| || ||||||| ||||||||||||| | | ||||||||||||||| || ||||| ||||||  ||| ||||||||||    
T  35683993 tccggaatgtcattagccctacaggatgtgccaacttttctctcgttcgccatcattatcgcattaatccggaaaatatattccataaagcaggtgtgca 35683894  T
Q  304 tttcagattttatattccggaatgcatcagtcatgg 339  Q
    || | ||||||||||||||| |||||||||||||||    
T  35683893 ttccggattttatattccgggatgcatcagtcatgg 35683858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 2 - 339
Target Start/End: Complemental strand, 39260471 - 39260135
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||| |||| |||||||||||||| |||||||||||||||||||||||  ||| ||||||||||||||| |||||||||||||||||    
T  39260471 acacccctaaaaaactagaaaatatttgaagaaaatgtaagaaaagaggtgaagtgaagaat-gaatgtatttgttgaagatagaagcctatttatagcc 39260373  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgtta---gtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtt 198  Q
    |||||||||| |||||||||| ||||||||||| |||||||||||   || ||||||| |||||||| ||||| ||||| |||  |||||||| ||| ||    
T  39260372 taaaacaagtcctaggtcattaatacagtcaataaaaacgtgttaatggttgttgtaaccgtccaaacccacattaatgactctgaatctttccggattt 39260273  T
Q  199 tatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggt 298  Q
    || ||||| ||| | ||||||| ||||| |||||| ||| ||||||||| |||   |||||||| |||||||| || ||||| ||||||||||||||| |    
T  39260272 tacattccggaacgcccttagctctacaggaagtgtcaacttttctctcattc---accattattgcattaatccggaaaatatattccggaaaacagat 39260176  T
Q  299 gtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    ||||||  | |||||||||||||||||||||| ||||||||    
T  39260175 gtgcatcccggattttatattccggaatgcattagtcatgg 39260135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 2 - 181
Target Start/End: Complemental strand, 43098723 - 43098546
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||    
T  43098723 acacccctaaaaaactaaaaa-catttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaatgtatttgttgaagatggaagcctatttatagcc 43098626  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctc 181  Q
    |||||||||| ||||||||||  || ||||||||||||||||||||||||||||| |||||||| ||||| |||||||||    
T  43098625 taaaacaagtcctaggtcattattatagtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatggctc 43098546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 2 - 181
Target Start/End: Original strand, 6347255 - 6347432
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||| ||| ||||||||| ||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||| | |||||||||    
T  6347255 acaccccaaaaaaactaaaaa-catttgaagaaaatggaagaaaagaggtgaaatgaagaat-gaaggtatttgttgaagatggaagcatgtttatagcc 6347352  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctc 181  Q
    |||||||||| ||||||||||  |||||| ||||||||||||||||||||||||| |||||||| ||||| |||||||||    
T  6347353 taaaacaagtcctaggtcattagtacagtaaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatggctc 6347432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 32337770 - 32337931
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  32337770 acacccctaaaaaactaaaaa-catttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttatagcc 32337867  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaa 165  Q
    |||| ||||| ||||||||||  |||| |||||||||||||||||||| |||||| ||||||||    
T  32337868 taaaccaagtcctaggtcattagtacaatcaatgaaaacgtgttagtgattgtaaccgtccaaa 32337931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 2 - 148
Target Start/End: Original strand, 32947038 - 32947183
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||| |||||||| ||||||||    
T  32947038 acacccctaaaaaactaaaaaacatttgaagaaaatgtaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatagaagcctacttatagcc 32947136  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagt 148  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||    
T  32947137 taaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 32947183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 50 - 339
Target Start/End: Original strand, 20091867 - 20092173
Alignment:
Q  50 gtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtg 149  Q
    |||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||  ||| |||||||||||||||||||||    
T  20091867 gtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatatatagcctaaaacaagtcctatgtcattactacggtcaatgaaaacgtgttagtg 20091965  T
Q  150 gttgtaatcgtccaaatccacaataatggctc---------ataatc------------tttctggagtttatattccagaatgtccttagccctacaag 228  Q
    |||||||  ||||||| | ||| |||||||||         | ||||            |||| ||| |||| ||||||||||||||||||||||||| |    
T  20091966 gttgtaactgtccaaaccgacattaatggctctctttcaaaagaatcaaatgttgaagctttccggattttacattccagaatgtccttagccctacagg 20092065  T
Q  229 aagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagattttatattccggaatgc 328  Q
    ||||||||| ||||| ||||||    ||||||||||||||||| || ||||| |||| |||||||||| ||||| |||| ||||||||||||||||||||    
T  20092066 aagtgccaacttttccctcgtt---taccattatcgcattaatccggaaaatatatttcggaaaacagatgtgcgtttcggattttatattccggaatgc 20092162  T
Q  329 atcagtcatgg 339  Q
    |||||||||||    
T  20092163 atcagtcatgg 20092173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 2 - 181
Target Start/End: Original strand, 37098295 - 37098470
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| |||||||   |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||| |||||||||||    
T  37098295 acacccctaaaaaactaaa---catttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatgaaagcttatttatagcc 37098390  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctc 181  Q
    |||||||||| | | |||||| ||||||||||| ||||||||||||||||||||| |||| ||| ||||| |||||||||    
T  37098391 taaaacaagtcccatgtcattaatacagtcaataaaaacgtgttagtggttgtaaccgtctaaacccacattaatggctc 37098470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 23144286 - 23144124
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||| |||||  |||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||    
T  23144286 acacccctaaaaaaccaaaaat-atttgaagaaaaaggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttataacc 23144189  T
Q  102 taaaacaagtactaggtcattga-tacagtcaatgaaaacgtgttagtggttgtaatcgtccaaa 165  Q
    |||||||||| |||||||||| | |||||||||||||||| ||||||||||||||||||||||||    
T  23144188 taaaacaagtcctaggtcatttactacagtcaatgaaaacatgttagtggttgtaatcgtccaaa 23144124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 7 - 152
Target Start/End: Complemental strand, 31701217 - 31701074
Alignment:
Q  7 cctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaa 106  Q
    |||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  31701217 cctaaaaaactaaaaaaaatt-gaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttatagcctaaaa 31701120  T
Q  107 caagtactaggtcattgatacagtcaatgaaaacgtgttagtggtt 152  Q
    ||||| ||||||||||  |||||||||||||||||||||| |||||    
T  31701119 caagtcctaggtcattactacagtcaatgaaaacgtgttattggtt 31701074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 586589 - 586428
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    |||||| |||| ||||||||| |||||||||||||| |||||||||||||| |||||||||  ||||||||||||||||||| |||||||||||||||||    
T  586589 acacccttaaaaaactaaaaa-catttgaagaaaattgaagaaaagaggtggagtgaagaat-gaaggtatttgttgaagatagaagcctatttatagcc 586492  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaa 165  Q
    ||||||||||  ||| |||||  |||||||||||||||| ||||||||||||||| ||||||||    
T  586491 taaaacaagtcttagttcattagtacagtcaatgaaaacttgttagtggttgtaaccgtccaaa 586428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 627334 - 627495
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    |||||| |||| ||||||||| |||||||||||||| |||||||||||||| |||||||||  ||||||||||||||||||| |||||||||||||||||    
T  627334 acacccttaaaaaactaaaaa-catttgaagaaaattgaagaaaagaggtggagtgaagaat-gaaggtatttgttgaagatagaagcctatttatagcc 627431  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaa 165  Q
    ||||||||||  ||| |||||  |||||||||||||||| ||||||||||||||| ||||||||    
T  627432 taaaacaagtcttagttcattagtacagtcaatgaaaacttgttagtggttgtaaccgtccaaa 627495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 150 - 339
Target Start/End: Complemental strand, 42131932 - 42131743
Alignment:
Q  150 gttgtaatcgtccaaatccacaataatggctcataatctttctggagtttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgt 249  Q
    ||||||| |||||||| ||| | |||||||||  |||||||| ||| |||| ||||| ||||||||||||||||| | |||||||||| |||||| ||||    
T  42131932 gttgtaaccgtccaaacccatattaatggctctgaatctttccggattttacattccggaatgtccttagccctataggaagtgccaacttttctgtcgt 42131833  T
Q  250 tcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||| ||||||||||||||||| |||||||| ||||| ||||||||| ||||| || | |||| |||||||| |||||||||||||||||    
T  42131832 tcaccaccattatcgcattaatccgaaaaatatattctggaaaacagatgtgctttccggattatatattccagaatgcatcagtcatgg 42131743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 214 - 339
Target Start/End: Original strand, 32947197 - 32947319
Alignment:
Q  214 ccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagattt 313  Q
    ||||||||||||| |||||| ||| |||||||||||||||   ||||||||||||||| || ||||| ||||||||||||||| |||||||| | |||||    
T  32947197 ccttagccctacaggaagtgtcaacttttctctcgttcac---cattatcgcattaatccggaaaatatattccggaaaacagatgtgcattccggattt 32947293  T
Q  314 tatattccggaatgcatcagtcatgg 339  Q
    ||||||| ||||||||||||| ||||    
T  32947294 tatattctggaatgcatcagttatgg 32947319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 202 - 339
Target Start/End: Complemental strand, 13546218 - 13546084
Alignment:
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||||| || |||||||| ||||||| |||||||||| ||||| |||||||||   |||||||||||||||||| ||||| |||| |||||||  | | ||    
T  13546218 attccggattgtccttaaccctacaggaagtgccaacttttccctcgttcac---cattatcgcattaattcggaaaatatatttcggaaaattgatttg 13546122  T
Q  302 catttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||| | |||||||||||||||||||||| ||||||||    
T  13546121 cattccggattttatattccggaatgcattagtcatgg 13546084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 202 - 339
Target Start/End: Original strand, 13678255 - 13678389
Alignment:
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||||| || |||||||| ||||||| |||||||||| ||||| |||||||||   |||||||||||||||||| ||||| |||| |||||||  | | ||    
T  13678255 attccggattgtccttaaccctacaggaagtgccaacttttccctcgttcac---cattatcgcattaattcggaaaatatatttcggaaaattgatttg 13678351  T
Q  302 catttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||| | |||||||||||||||||||||| ||||||||    
T  13678352 cattccggattttatattccggaatgcattagtcatgg 13678389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 197 - 329
Target Start/End: Original strand, 6347469 - 6347598
Alignment:
Q  197 tttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacag 296  Q
    |||| ||||| ||||  |||||||||||||  ||||||||| ||||| || ||||||   ||||||||||||||| || ||||| ||||||||||||||     
T  6347469 tttacattccggaataaccttagccctacagaaagtgccaacttttcccttgttcac---cattatcgcattaatccggaaaatatattccggaaaacaa 6347565  T
Q  297 gtgtgcatttcagattttatattccggaatgca 329  Q
      |||||||||||||||||| ||| ||||||||    
T  6347566 aggtgcatttcagattttattttctggaatgca 6347598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 296
Target Start/End: Original strand, 37098507 - 37098603
Alignment:
Q  197 tttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacag 296  Q
    |||| ||||| ||||||||||||||||||| |||||||||| ||||| |||||||   ||||||||||||||||| || ||||| |||| ||||||||||    
T  37098507 tttacattccggaatgtccttagccctacaggaagtgccaacttttccctcgttc---accattatcgcattaatccggaaaatatatttcggaaaacag 37098603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 13546367 - 13546308
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaa 62  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13546367 acacccctaaaaaactaaaaa-catttgaagaaaatggaagaaaagaggtgaagtgaagaa 13546308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 13678106 - 13678165
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaa 62  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13678106 acacccctaaaaaactaaaa-acatttgaagaaaatggaagaaaagaggtgaagtgaagaa 13678165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 339
Target Start/End: Complemental strand, 43098494 - 43098370
Alignment:
Q  212 gtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagat 311  Q
    ||||||| |||||||||||||| ||| ||||| |||||| ||   ||||||||||||||| || ||||| |||||  || ||||  ||||| || | |||    
T  43098494 gtccttaaccctacaagaagtgtcaacttttccctcgtttac---cattatcgcattaatccggaaaatatattctagacaacatatgtgctttccggat 43098398  T
Q  312 tttatattccggaatgcatcagtcatgg 339  Q
    ||||| ||||||||||||||||||||||    
T  43098397 tttatcttccggaatgcatcagtcatgg 43098370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 42132046 - 42131968
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaaga 82  Q
    ||||||||||| || || ||||||||||||||||||| | |||||||||||||||||||||  ||||||||||||||||||    
T  42132046 acacccctaaaaaa-tagaaaacatttgaagaaaatgtacgaaaagaggtgaagtgaagaa-tgaaggtatttgttgaaga 42131968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 334
Target Start/End: Original strand, 627553 - 627682
Alignment:
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||||| ||| ||||||| |||||||||||||| ||| ||||| |||||||   | |||||||| ||||||||| ||||| |||||| |||||||    |     
T  627553 attccggaacgtccttaaccctacaagaagtgtcaacttttccctcgttc---atcattatcgtattaattcggaaaatatattcctgaaaacaaagcta 627649  T
Q  302 catttcagattttatattccggaatgcatcagt 334  Q
    |||| | |||||||| |||||||||||||||||    
T  627650 cattccggattttattttccggaatgcatcagt 627682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 339
Target Start/End: Complemental strand, 31701021 - 31700872
Alignment:
Q  187 ctttctggagtttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattc 286  Q
    ||||| ||| |||| |||||||  |||||||||||||||| ||| |||||| ||||| |||||||   | ||||||||||||||| |  |||||  ||||    
T  31701021 ctttccggattttacattccagggtgtccttagccctacaggaaatgccaacttttccctcgttc---atcattatcgcattaatccagaaaatagattc 31700925  T
Q  287 cggaaaacaggtgtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||||| | | ||||| || |||||||||||||   ||||| |||||||||||    
T  31700924 cggaaatctgatgtgcgttccagattttatattgttgaatgtatcagtcatgg 31700872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 121
Target Start/End: Original strand, 28284449 - 28284527
Alignment:
Q  42 gaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcat 121  Q
    |||||||||||||||||||||  ||||| |||||||||||||| || |||||||| ||||||||||| || |||| ||||    
T  28284449 gaaaagaggtgaagtgaagaat-gaaggaatttgttgaagatgcaaacctatttacagcctaaaacatgtcctagatcat 28284527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 334
Target Start/End: Original strand, 32338000 - 32338118
Alignment:
Q  213 tccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagatt 312  Q
    |||||| |||||||||||||| |||  |||  |||||||||   |||||||| |||||| || ||||| ||||||||||||||   ||||||| | ||||    
T  32338000 tccttaaccctacaagaagtgtcaaccttttcctcgttcac---cattatcgtattaatccggaaaatatattccggaaaacaaaggtgcattccggatt 32338096  T
Q  313 ttatattccggaatgcatcagt 334  Q
    |||| ||| |||||||||||||    
T  32338097 ttattttctggaatgcatcagt 32338118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 334
Target Start/End: Complemental strand, 586370 - 586241
Alignment:
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||||| ||| ||||||| |||||||||||||| ||| ||||| |||||||   | |||||||| |||||| || ||||| |||||| |||||||    |     
T  586370 attccggaacgtccttaaccctacaagaagtggcaacttttccctcgttc---atcattatcgtattaatccggaaaatatattccagaaaacaaagcta 586274  T
Q  302 catttcagattttatattccggaatgcatcagt 334  Q
    |||| | |||||||| |||||||||||||||||    
T  586273 cattccggattttattttccggaatgcatcagt 586241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 11457022 - 11457092
Alignment:
Q  40 aagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 111  Q
    |||||||||||| ||||||| ||  ||||  ||||||||||||||||||||| |||||| ||||||||||||    
T  11457022 aagaaaagaggttaagtgaaaaag-gaagaaatttgttgaagatggaagcctgtttataacctaaaacaagt 11457092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 111
Target Start/End: Complemental strand, 4258854 - 4258771
Alignment:
Q  27 ttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 111  Q
    |||||||||||| |||||| ||||||||||||||||  || || | |||||||||||  || ||| |||||||||| ||||||||    
T  4258854 ttgaagaaaatgtaagaaatgaggtgaagtgaagaa-tgacggaaattgttgaagatccaaacctttttatagccttaaacaagt 4258771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 339
Target Start/End: Complemental strand, 23144069 - 23143946
Alignment:
Q  213 tccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagatt 312  Q
    ||||||| ||||||||||||| ||| ||||| |||||||   |||||||||| ||| || || ||||| |||||||||| |||   |  |||| | ||||    
T  23144069 tccttaggcctacaagaagtgtcaacttttccctcgttc---accattatcgtatttatccggaaaatatattccggaacacaaaggcacattccggatt 23143973  T
Q  313 ttatattccggaatgcatcagtcatgg 339  Q
    |||||||  |||| |||||||||||||    
T  23143972 ttatattttggaacgcatcagtcatgg 23143946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 226; Significance: 1e-124; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 2 - 347
Target Start/End: Complemental strand, 42882769 - 42882425
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||  |||| ||||||||||||||||||||||||||||||||    
T  42882769 acacccctaaaaaactaaaaaacatttgaagaaaatgtaagaaaagaggtgatgtgaagaat-gaagatatttgttgaagatggaagcctatttatagcc 42882671  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttat 201  Q
    |||||||||| |||||||||| |||||||||||||||| |||||||||||||||| | |||||| |||||||||||||||  |||||||| || |||||     
T  42882670 taaaacaagtcctaggtcattaatacagtcaatgaaaatgtgttagtggttgtaaccatccaaacccacaataatggctctgaatctttccggtgtttac 42882571  T
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||||| |||||| |||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||| || ||||| |||||||||||||||||||     
T  42882570 attccggaatgttcttagccctacaggaagtgccaacttttctctcgttcaccaccattatcgcattaatccggaaaatatattccggaaaacaggtgtc 42882471  T
Q  302 catttcagattttatattccggaatgcatcagtcatggtctgtggt 347  Q
    |||||| |||||||| |||||||||||||||||||||||| |||||    
T  42882470 catttcggattttattttccggaatgcatcagtcatggtcagtggt 42882425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 2 - 347
Target Start/End: Original strand, 37952259 - 37952603
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||| ||||||||||||||  |||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||    
T  37952259 acacccctaaaaaactaaaaaccatttgaagaaaatataagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagcctttttatagcc 37952357  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttat 201  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||||  ||||||| ||||| ||||| |||  |||||||| ||| ||||     
T  37952358 taaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgtaacggtccaaacccacattaatgactctgaatctttccggattttac 37952457  T
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||||| ||||||||||||||||| | |||||| ||| ||||| ||||||||| ||||||||||||||||| || ||||| ||||||||||||||| ||||    
T  37952458 attccggaatgtccttagccctataggaagtgtcaacttttccctcgttcaccaccattatcgcattaatccggaaaatatattccggaaaacagatgtg 37952557  T
Q  302 catttcagattttatattccggaatgcatcagtcatggtctgtggt 347  Q
    | || | |||| ||||||  |||||||||||||||||||| |||||    
T  37952558 ctttccggattatatattttggaatgcatcagtcatggtcggtggt 37952603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 44496444 - 44496780
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||  ||| |||||||||||||||| ||||||||||||||||    
T  44496444 acacccctaaaaaactaaaaaacatttgaagaaaatggaagaaaataggtggagtgaagaat-gaaagtatttgttgaagatgaaagcctatttatagcc 44496542  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttat 201  Q
    |||||||||| ||| |||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||   |||||||| ||| ||||     
T  44496543 taaaacaagtcctatgtcattaatacagtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatggctttgaatctttccggattttac 44496642  T
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||||| ||||||| ||||| ||||| |||||| ||| ||||| ||||||||| | ||||||||||||||| || ||||| ||||||||||||||  ||||    
T  44496643 attccggaatgtctttagctctacaggaagtgtcaacttttccctcgttcaccatcattatcgcattaatccggaaaatatattccggaaaacatatgtg 44496742  T
Q  302 catttcagattttatattccggaatgcatcagtcatgg 339  Q
     ||| | |||| |||||||||||||| |||||||||||    
T  44496743 aattccggattgtatattccggaatgtatcagtcatgg 44496780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 29961356 - 29961690
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    |||||||| || ||||||||| | ||||||||||||| ||||||||| |||||||||||||  |||||||||||||||||||||||| ||||||||||||    
T  29961356 acacccctgaaaaactaaaaaccgtttgaagaaaatgtaagaaaagatgtgaagtgaagaat-gaaggtatttgttgaagatggaagtctatttatagcc 29961454  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttat 201  Q
    ||||| ||||  || |||||| ||||| ||||||||||||||||||||||||||| ||| |||| ||||| |||||||||  |||||||| | | ||||     
T  29961455 taaaataagtcttaagtcattaatacaatcaatgaaaacgtgttagtggttgtaaccgttcaaacccacattaatggctctgaatctttccgaattttac 29961554  T
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||||| ||||||||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||||||| |||||||| |||||||  ||| || ||||    
T  29961555 attccggaatgtccttagccctacatgaagtgccaacttttccctcgttcaccaccattatcgcattaatccgaaaaatatattccg--aaaaagatgtg 29961652  T
Q  302 catttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||| | |||||||||||| ||||||||||||||||||    
T  29961653 cattccggattttatattctggaatgcatcagtcatgg 29961690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 41723487 - 41723825
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||    
T  41723487 acacccctaaaaaacaaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatgaaagcctatttatagcc 41723585  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgta---atcgtccaaatccacaataatggctcataatctttctggagtt 198  Q
    |||||||||| |||||||||| ||| |||||||||||||||||| ||||||||    |||||||||| ||||| |||||||||  |||||||   || ||    
T  41723586 taaaacaagt-ctaggtcattaatatagtcaatgaaaacgtgttggtggttgttgttatcgtccaaacccacattaatggctctgaatcttttcagattt 41723684  T
Q  199 tatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggt 298  Q
    || ||| | ||||||||||||||||| |  ||||| ||| ||||| ||||||||| ||||||||||||||||| || ||||| ||||||||||||||| |    
T  41723685 tacatttcggaatgtccttagccctatagaaagtgtcaacttttccctcgttcaccaccattatcgcattaatccggaaaatatattccggaaaacagat 41723784  T
Q  299 gtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||| || | |||| ||||||||||||||||||||||||||    
T  41723785 gtgctttccggattatatattccggaatgcatcagtcatgg 41723825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 2 - 339
Target Start/End: Complemental strand, 14587522 - 14587180
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcc---tatttata 98  Q
    ||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||   ||||||||    
T  14587522 acacccctaaaaaactaaaaaatatttgaagaaaatgtaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagccgcctatttata 14587424  T
Q  99 gcctaaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgt---aatcgtccaaatccacaataatggctcataatctttctgga 195  Q
    ||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||   || |||||||| |||||  ||||||||  |||||||| |||    
T  14587423 gcctaaaacaagtcctaagtcattaatacagtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacataaatggctctgaatctttccgga 14587324  T
Q  196 gtttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaaca 295  Q
     |||| ||||| ||||||||||||||| | | ||||| |||| ||||| ||||||||| ||||||||||||||||| || ||||| |||||| |||||||    
T  14587323 ttttacattccggaatgtccttagcccaataggaagtaccaacttttccctcgttcaccaccattatcgcattaatccggaaaatatattccagaaaaca 14587224  T
Q  296 ggtgtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    | ||||| || | |||| ||||||||| ||||||||||||||||    
T  14587223 gatgtgctttccggattatatattccgtaatgcatcagtcatgg 14587180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 2 - 291
Target Start/End: Original strand, 33801321 - 33801612
Alignment:
Q  2 acacccctaaataactaaaaaa-catttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagc 100  Q
    ||||||| ||| |||||||||| ||||||||||||||| |||||||||||||||||||||||  | |||||||| |||||||||||||||||||||||||    
T  33801321 acacccccaaaaaactaaaaaaacatttgaagaaaatgtaagaaaagaggtgaagtgaagaat-gtaggtattttttgaagatggaagcctatttatagc 33801419  T
Q  101 ctaaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggt---tgtaatcgtccaaatccacaataatggctcataatctttctggagt 197  Q
    ||||||||||| ||| ||||||  |||||||||||||||||||||||||||   |||||||||||||| ||||| ||||| |||  ||||||||  || |    
T  33801420 ctaaaacaagtcctaagtcattattacagtcaatgaaaacgtgttagtggttgctgtaatcgtccaaacccacattaatgactctgaatctttccagatt 33801519  T
Q  198 ttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaa 291  Q
    ||| ||||| ||||||||||||||||| | |||||||||| ||||| ||||||||| |||||||||||||||||||| ||||| ||||||||||    
T  33801520 ttacattccggaatgtccttagccctataggaagtgccaa-ttttccctcgttcaccaccattatcgcattaattcggaaaatatattccggaa 33801612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 2 - 339
Target Start/End: Complemental strand, 41900466 - 41900119
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||| | ||||||||  |||||||||| ||||||||||||||||||||||||||    
T  41900466 acacccctaaaaaactaaaaa-catttgaagaaaatggaagaaaagaggtaaggtgaagaat-gaaggtatttattgaagatggaagcctatttatagcc 41900369  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctc------at---------aat 186  Q
    ||||||||||  ||||||||| |||||||||||||||| |||||||||||||||| |||||||| ||||| |||||||||      ||         ||     
T  41900368 taaaacaagtcataggtcattaatacagtcaatgaaaatgtgttagtggttgtaaccgtccaaacccacattaatggctctctttaatccaatgctgaaa 41900269  T
Q  187 ctttctggagtttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattc 286  Q
    |||| |||| |||| ||||| || ||||||||||||||||||||||||||| ||||| |||| ||   ||||||||||||||||| || |||||  ||||    
T  41900268 ctttttggattttacattccggagtgtccttagccctacaagaagtgccaacttttccctcgctc---accattatcgcattaatccggaaaataaattc 41900172  T
Q  287 cggaaaacaggtgtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
      ||||||| |||| |||| | ||||||||||||| |||||||||||||||||    
T  41900171 ttgaaaacacgtgttcattccggattttatattccagaatgcatcagtcatgg 41900119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 2 - 271
Target Start/End: Complemental strand, 3517754 - 3517487
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||  ||| ||||||||||||    
T  3517754 acacccctaaaaaactaaaaaacatttgaagaaaatgtaagaaaagaggtgaagtgaagaa-tgaaggtatttgttgaagataaaagtctatttatagcc 3517656  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtg---gttgtaatcgtccaaatccacaataatggctcataatctttctggagtt 198  Q
    |||||||| | |||||||||   |||||||||||||||||||||||||   ||||||| |||||||| ||||| |||||||||  |||||||| ||| ||    
T  3517655 taaaacaactcctaggtcat---tacagtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatggctctgaatctttccggattt 3517559  T
Q  199 tatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaat 271  Q
    || ||||   ||||||||||||| || | |||||||||| ||||| ||||||||| |||||||||||||||||    
T  3517558 tacattctgaaatgtccttagccgtataggaagtgccaacttttc-ctcgttcaccaccattatcgcattaat 3517487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 38860636 - 38860989
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||| ||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||    
T  38860636 acacctctaaaaaactaaaaa-catttgaagaaaacggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatgaaagcctatttatagcc 38860733  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctc---------ataatc----- 187  Q
    ||||||||||  ||| ||||| ||||| |||||||||||||||||||||| |||| |||||||| ||||| |||||||||         | ||||         
T  38860734 taaaacaagtcatagatcattaatacattcaatgaaaacgtgttagtggtagtaaccgtccaaacccacattaatggctctctttcaaaagaatccaatg 38860833  T
Q  188 -------tttctggagtttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaat 280  Q
           |||| ||| |||| ||||  ||| ||||||||||||||||||||| |||| ||||| |||||||   || |||||||||||||| || |||||    
T  38860834 ttgaagctttccggattttacattctggaacgtccttagccctacaagaagtaccaacttttccctcgttc---actattatcgcattaatccggaaaat 38860930  T
Q  281 ctattccggaaaacaggtgtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
     || |||||||||||| |||||||| | |||||||||||||||||||||||||||||||    
T  38860931 atactccggaaaacagatgtgcattccggattttatattccggaatgcatcagtcatgg 38860989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 2 - 181
Target Start/End: Original strand, 41091127 - 41091304
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||| ||||| ||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  41091127 acacccctaaaaaactaaaaa-catttaaagaaaatggaagaaaagaagtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttatagcc 41091224  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctc 181  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||    
T  41091225 taaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatggctc 41091304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 50262170 - 50261997
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  50262170 acacccctaaaaaactaaaaat-atttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttatagcc 50262073  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatg 177  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||| |||| ||||| |||||    
T  50262072 taaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgtaaccgttcaaacccacattaatg 50261997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 2 - 181
Target Start/End: Original strand, 41086359 - 41086536
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||| ||||| ||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||| |    
T  41086359 acacccctaaaaaactaaaaa-catttaaagaaaatggaagaaaagaagtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttatagtc 41086456  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctc 181  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||| | |||||| ||||| |||||||||    
T  41086457 taaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgtaaccttccaaacccacattaatggctc 41086536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 2 - 250
Target Start/End: Complemental strand, 12700718 - 12700468
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||||| ||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  12700718 acaccccttaaaaactaaaaaacatttgaagaaaatgtaagaaaagaggtcaagtgaagaat-gaagatatttgttgaagatggaagcctatttatagcc 12700620  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttag---tggttgtaatcgtccaaatccacaataatggctcataatctttctggagtt 198  Q
    |||||||||| |||| ||||| |||||||||||||||| |||||||   |||||||||  |||||||  |||| |||||||||  ||||||||  || ||    
T  12700619 taaaacaagtcctagatcattaatacagtcaatgaaaatgtgttagtggtggttgtaactgtccaaacgcacattaatggctctgaatctttccagattt 12700520  T
Q  199 tatattccagaatgtccttagccctacaagaagtgccaatttttctctcgtt 250  Q
    || ||||| |||   ||||||||||||| |||||| ||| ||||||||||||    
T  12700519 tacattccggaacacccttagccctacaggaagtgtcaacttttctctcgtt 12700468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 49851668 - 49851829
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||    
T  49851668 acacccctaaaaaactaaaaa-catttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatgaaagcctatttatagcc 49851765  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaa 165  Q
    |||||||||| ||||||||||  |||||||||||||||| ||||||||||||||| ||||||||    
T  49851766 taaaacaagtcctaggtcattagtacagtcaatgaaaacatgttagtggttgtaaccgtccaaa 49851829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 4 - 166
Target Start/End: Original strand, 12528407 - 12528567
Alignment:
Q  4 acccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagccta 103  Q
    ||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  12528407 acccctaaaaaactaaaaa-catttgaagaaaatggaagaaaataggtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttatagccta 12528504  T
Q  104 aaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaat 166  Q
    |||||||| |||||||||| |||||||||||||||||||||| |||||||||| |||| ||||    
T  12528505 aaacaagtcctaggtcattaatacagtcaatgaaaacgtgttggtggttgtaaccgtcgaaat 12528567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 11952583 - 11952422
Alignment:
Q  19 aaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||  |  ||    
T  11952583 aaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttatagcctaaaataagtcttttgt 11952485  T
Q  119 cattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctc 181  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||  |||| |||||||||    
T  11952484 cattaatacagtcaatgaaaacgtgttagtggttgtaaccgtccaaactcacattaatggctc 11952422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 27216758 - 27216919
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||  ||| |||||| ||||||||| ||||||||||||||||    
T  27216758 acacccctaaaaaactaaaaa-catttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaagtattttttgaagatgaaagcctatttatagcc 27216855  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaa 165  Q
    |||||||||| ||||||||||  |||| ||||||||||||||||||||||||||| ||||||||    
T  27216856 taaaacaagtcctaggtcattagtacaatcaatgaaaacgtgttagtggttgtaaccgtccaaa 27216919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 23984214 - 23984056
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||    
T  23984214 acacccctaaaaaactaaaaa-cattttaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaaacctatttatagcc 23984117  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaa 165  Q
    |||||||||| |||||||||   |||||||||||||||| ||||||||||||||| ||||||||    
T  23984116 taaaacaagtcctaggtcat---tacagtcaatgaaaacatgttagtggttgtaaccgtccaaa 23984056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 2 - 180
Target Start/End: Complemental strand, 52632536 - 52632362
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| |||||||   |||||||| |||||||| |||||||||||||||||||||  ||||  |||||||||||||||||||||||||||||||    
T  52632536 acacccctaaaaaactaaa---catttgaataaaatggaggaaaagaggtgaagtgaagaat-gaagacatttgttgaagatggaagcctatttatagcc 52632441  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggct 180  Q
    |||||||||| |||||||||| ||||| ||||||||||||||||||||||||||| |||| ||| ||||| ||||||||    
T  52632440 taaaacaagtcctaggtcattaatacaatcaatgaaaacgtgttagtggttgtaaccgtctaaacccacattaatggct 52632362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 2 - 132
Target Start/End: Complemental strand, 44757710 - 44757581
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||| ||| ||||| ||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  44757710 acaccccgaaaaaactagaaaacatttgaagaaaatgtaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttatagcc 44757612  T
Q  102 taaaacaagtactaggtcattgatacagtca 132  Q
    |||||||||| |||||||||| |||||||||    
T  44757611 taaaacaagtcctaggtcattaatacagtca 44757581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 124 - 279
Target Start/End: Complemental strand, 48964986 - 48964832
Alignment:
Q  124 atacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttatattccagaatgtccttagccct 223  Q
    |||||||||||||||||||||||||| || ||| |||||||| ||||| ||||| |||  |||||||  ||| |||||||||| ||||||||||||||||    
T  48964986 atacagtcaatgaaaacgtgttagtgattctaaccgtccaaacccacattaatgactctgaatcttttcggattttatattccggaatgtccttagccct 48964887  T
Q  224 acaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaa 279  Q
    ||| |||||| ||| ||||| ||||||| | |||||||||||| ||||||| ||||    
T  48964886 acaggaagtg-caacttttccctcgttcgccaccattatcgcaataattcggaaaa 48964832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 197 - 339
Target Start/End: Original strand, 12528619 - 12528758
Alignment:
Q  197 tttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacag 296  Q
    |||| |||||| || |||||||||||||||||||||||||| ||||| ||||||||| |   |||||| ||| ||  | ||||| |||||||||||||||    
T  12528619 tttacattccaaaacgtccttagccctacaagaagtgccaacttttccctcgttcacta---ttatcgtattgatctggaaaatatattccggaaaacag 12528715  T
Q  297 gtgtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
     |||||||| | |||||||||||||||||||||||||||||||    
T  12528716 atgtgcattccggattttatattccggaatgcatcagtcatgg 12528758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 197 - 339
Target Start/End: Complemental strand, 50261956 - 50261817
Alignment:
Q  197 tttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacag 296  Q
    |||| ||||| ||| |||||||||||||||||||||||||| ||||| |||||||||   ||||||||||||||| || ||||| ||||||| ||| ||     
T  50261956 tttacattccggaacgtccttagccctacaagaagtgccaacttttccctcgttcac---cattatcgcattaatccggaaaatatattccgaaaatcat 50261860  T
Q  297 gtgtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
     ||||||||  |||||||||||||||||||||||| |||||||    
T  50261859 atgtgcattctagattttatattccggaatgcatcggtcatgg 50261817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 197 - 339
Target Start/End: Complemental strand, 52632325 - 52632187
Alignment:
Q  197 tttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacag 296  Q
    |||| ||||| |||||||||||||||||||||||||||||| |||||||||||||   |||||||||||||||||||| ||||| ||||||||||||||     
T  52632325 tttacattccggaatgtccttagccctacaagaagtgccaacttttctctcgttc---accattatcgcattaattcggaaaatatattccggaaaacat 52632229  T
Q  297 gtgtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
     |||||| | | |||| | ||||||  ||||||||||||||||    
T  52632228 atgtgca-tccggattgtctattccataatgcatcagtcatgg 52632187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 22858800 - 22858924
Alignment:
Q  146 agtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttatattccagaatgtccttagccctacaagaagtgccaatttttctc 245  Q
    ||||||||||| |||| ||| ||||| |||||||||  |||||||| ||| |||||||||||||||||||||||||||||| |||||  ||| ||||| |    
T  22858800 agtggttgtaaccgtcaaaacccacattaatggctctgaatctttccggattttatattccagaatgtccttagccctacaggaagt-acaacttttccc 22858898  T
Q  246 tcgttcacaaccattatcgcattaat 271  Q
    |||||||| |||||||| ||||||||    
T  22858899 tcgttcaccaccattattgcattaat 22858924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 197 - 339
Target Start/End: Original strand, 41086573 - 41086712
Alignment:
Q  197 tttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacag 296  Q
    |||| ||||| |||||||||||||| |||| |||||| ||| ||||| |||||||||   ||||||||||||||| |   |||| |||||||||||||||    
T  41086573 tttacattccggaatgtccttagccatacaggaagtgtcaacttttccctcgttcac---cattatcgcattaatccaggaaatatattccggaaaacag 41086669  T
Q  297 gtgtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
     |||||||| | |||||||||||||| ||||||||||| ||||    
T  41086670 atgtgcattccggattttatattccgaaatgcatcagttatgg 41086712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 197 - 339
Target Start/End: Original strand, 41091341 - 41091480
Alignment:
Q  197 tttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacag 296  Q
    |||| ||||| |||||||||||||| |||| |||||| ||| ||||| |||||||||   ||||||||||||||| |   |||| |||||||||||||||    
T  41091341 tttacattccggaatgtccttagccatacaggaagtgtcaacttttccctcgttcac---cattatcgcattaatccaggaaatatattccggaaaacag 41091437  T
Q  297 gtgtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
     |||||||| | |||||||||||||| ||||||||||| ||||    
T  41091438 atgtgcattccggattttatattccgaaatgcatcagttatgg 41091480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 48965079 - 48964984
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttata 98  Q
    ||||||||||| ||||||||| ||||||||||||||| ||||||||||||||  |||||||  ||| ||||||||||||||||||||||||||||||    
T  48965079 acacccctaaaaaactaaaaagcatttgaagaaaatgtaagaaaagaggtgatatgaagaa-tgaacgtatttgttgaagatggaagcctatttata 48964984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 22858717 - 22858801
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaag 88  Q
    ||||||||||| |||||||| |||||||||||||||| |||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  22858717 acacccctaaaaaactaaaa-acatttgaagaaaatgtaagaaaagaggtgatgtgaagaa-tgaaggtatttgttgaagatggaag 22858801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 339
Target Start/End: Complemental strand, 23984016 - 23983864
Alignment:
Q  184 aatctttctggagtttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatcta 283  Q
    |||||||| ||| |||| ||||| || | |||||| |||||||||||||||||| ||||| |||| ||   |||||||||||||||||  | |||||  |    
T  23984016 aatctttccggattttacattccggattctccttaaccctacaagaagtgccaacttttccctcgctc---accattatcgcattaatctggaaaataaa 23983920  T
Q  284 ttccggaaaacaggtgtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    ||  ||||||||  |||||||| ||||||||||||||  |||||||||||| ||||    
T  23983919 ttttggaaaacacatgtgcattccagattttatattcttgaatgcatcagtaatgg 23983864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 122
Target Start/End: Complemental strand, 30518294 - 30518198
Alignment:
Q  25 atttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcatt 122  Q
    |||||||||||||| |||||||||| | ||||||||||  ||||  |||| ||||| ||| |||||||||||||||||||||||||| ||| ||||||    
T  30518294 atttgaagaaaatgaaagaaaagagattaagtgaagaat-gaagaaattttttgaacatgcaagcctatttatagcctaaaacaagtcctacgtcatt 30518198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 164 - 305
Target Start/End: Complemental strand, 44757572 - 44757431
Alignment:
Q  164 aatccacaataatggctcataatctttctggagtttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatc 263  Q
    |||||||| ||||||||   |||||||| | | |||| |||||  |||||||||  | ||| | |||||||||| ||||| ||||||||| |||||||||    
T  44757572 aatccacattaatggctttgaatctttccgaattttacattccgaaatgtccttgactctataggaagtgccaacttttccctcgttcaccaccattatc 44757473  T
Q  264 gcattaattcgaaaaatctattccggaaaacaggtgtgcatt 305  Q
    |||||||| || ||||| |||||| |||| ||| ||||||||    
T  44757472 gcattaatccggaaaatatattccagaaatcagatgtgcatt 44757431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 334
Target Start/End: Original strand, 49851898 - 49852016
Alignment:
Q  213 tccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagatt 312  Q
    |||||| |||||||||||||||||| ||||| |||||||   |||||||| | |||||| |||||||| ||||||| ||||||   || ||||   ||||    
T  49851898 tccttaaccctacaagaagtgccaacttttccctcgttc---accattattgtattaatccgaaaaatatattccgaaaaacaaaggtacattctggatt 49851994  T
Q  313 ttatattccggaatgcatcagt 334  Q
    |||| || ||||||||||||||    
T  49851995 ttattttgcggaatgcatcagt 49852016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 34549851 - 34549931
Alignment:
Q  40 aagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcat 121  Q
    ||||||| |||||| ||||||||  ||||| |||||||||| ||| || ||||||||||||||||||||||| |||| ||||    
T  34549851 aagaaaacaggtgacgtgaagaat-gaaggaatttgttgaatatgcaaacctatttatagcctaaaacaagtcctagatcat 34549931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 208 - 334
Target Start/End: Original strand, 27216982 - 27217105
Alignment:
Q  208 gaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttc 307  Q
    |||| |||||| ||||||||||||||| || |||||||| ||||   |||| ||||| |||||| || ||||| ||||| ||||||||   || |||| |    
T  27216982 gaatttccttaaccctacaagaagtgcaaacttttctcttgttc---accagtatcgtattaatccggaaaatatattctggaaaacaaaggtacattcc 27217078  T
Q  308 agattttatattccggaatgcatcagt 334  Q
    ||||| ||| ||||||| |||||||||    
T  27217079 agattatattttccggactgcatcagt 27217105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 29913810 - 29913928
Alignment:
Q  26 tttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcattgat 125  Q
    ||||||||||||| ||| ||||||||| | |||||||  ||||  | |||| ||||||  |||| |||||||| || ||||||||| |||||| ||   |    
T  29913810 tttgaagaaaatgtaagtaaagaggtgtaatgaagaat-gaagaaaattgtagaagattcaagcttatttataacccaaaacaagtcctaggttataagt 29913908  T
Q  126 acagtcaatgaaaacgtgtt 145  Q
    |||| |||||||||||||||    
T  29913909 acagacaatgaaaacgtgtt 29913928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 339
Target Start/End: Original strand, 22858924 - 22858978
Alignment:
Q  285 tccggaaaacaggtgtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||||||||||| |||||||| | |||| ||||||||||||||||  ||||||||    
T  22858924 tccggaaaacagatgtgcattccggattgtatattccggaatgcactagtcatgg 22858978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 338
Target Start/End: Complemental strand, 3517487 - 3517434
Alignment:
Q  285 tccggaaaacaggtgtgcatttcagattttatattccggaatgcatcagtcatg 338  Q
    |||||||||||| ||||| ||   |||| |||||||||||||||||||||||||    
T  3517487 tccggaaaacagatgtgctttctggattatatattccggaatgcatcagtcatg 3517434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 111
Target Start/End: Complemental strand, 22335000 - 22334963
Alignment:
Q  74 tgttgaagatggaagcctatttatagcctaaaacaagt 111  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  22335000 tgttgaagatcgaagcctttttatagcctaaaacaagt 22334963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 224; Significance: 1e-123; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 2 - 337
Target Start/End: Original strand, 3556580 - 3556914
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||| ||||||||||| |||||||||||    
T  3556580 acacccctaaaaaactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggaatttgttaaagatggaagcatatttatagcc 3556678  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttat 201  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||  |||||||| ||||||||     
T  3556679 taaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtgcttgtaatcgtccaaacccacaataacggctccgaatctttccggagtttac 3556778  T
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||||  ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||| || ||||| ||||||||||||||||||||    
T  3556779 attctggaatgtccttagccctacaggaagtgccaacttttctctcgttcaccaccattatcgcattaatccggaaaatatattccggaaaacaggtgtg 3556878  T
Q  302 catttcagattttatattccggaatgcatcagtcat 337  Q
    |||| |  |||||||||| |||||||||||||||||    
T  3556879 cattccgaattttatatttcggaatgcatcagtcat 3556914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 37012783 - 37013119
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||    
T  37012783 acacccctaataaactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaagtatttgttgaagatggaagcctatttatagcc 37012881  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttat 201  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||  |||||||  ||| ||||     
T  37012882 taaaacaagttctaggtcattcatacagtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatggctctgaatcttttcggattttac 37012981  T
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||| | || |||||||||||||| | |||||||||| ||||| ||||||||| |||| |||||| ||||| |||||||| ||||||||||||||| ||||    
T  37012982 atttcggagtgtccttagccctataggaagtgccaacttttccctcgttcaccaccaatatcgcgttaatccgaaaaatatattccggaaaacagatgtg 37013081  T
Q  302 catttcagattttatattccggaatgcatcagtcatgg 339  Q
     ||| |  ||||||||||||||||||||||||||||||    
T  37013082 aattccgaattttatattccggaatgcatcagtcatgg 37013119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 2 - 341
Target Start/End: Original strand, 8734653 - 8734990
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||| | |||||||||||||||||||||    
T  8734653 acacccctaaaaaactaaaaaacatttgaagaaaatgtaagaaaagaggtgaagtgaagaat-gaaggtatttgttca-gatggaagcctatttatagcc 8734750  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttat 201  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||  |||||||| ||| ||||     
T  8734751 taaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaacccacattaatggctctgaatctttccggattttac 8734850  T
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||||| ||||||||||||| ||| | |||||| ||| |||||  |||||||| |||||||||||||||||||| ||||| ||||||||||||||| ||||    
T  8734851 attccggaatgtccttagctctataggaagtgtcaacttttccttcgttcaccaccattatcgcattaattcggaaaatatattccggaaaacagatgtg 8734950  T
Q  302 catttcagattttatattccggaatgcatcagtcatggtc 341  Q
    | || | |||| || ||||| |||||||||||||||||||    
T  8734951 ctttccggattataaattccagaatgcatcagtcatggtc 8734990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 19 - 339
Target Start/End: Original strand, 27114280 - 27114596
Alignment:
Q  19 aaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  27114280 aaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaagatatttgttgaagatggaagcctatttatagcctaaaacaagtcctatgt 27114378  T
Q  119 cattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttatattccagaatgtcctta 218  Q
    |||| |||||||||||||||||||||| |||||||||| |||||||| ||||| |||||||||  |||||||| ||| |||| ||||  |||||||||||    
T  27114379 cattaatacagtcaatgaaaacgtgttggtggttgtaaccgtccaaacccacattaatggctctgaatctttccggattttacattctggaatgtcctta 27114478  T
Q  219 gccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagattttatat 318  Q
    |||||| | |||||||||||||||| |||||||   ||||||||||||| ||| || | ||| |||||| |||||||| |||||||| || |||||||||    
T  27114479 gccctataggaagtgccaatttttccctcgttc---accattatcgcatgaatccggataatatattccagaaaacagatgtgcattccaaattttatat 27114575  T
Q  319 tccggaatgcatcagtcatgg 339  Q
    |||||||||||||||||||||    
T  27114576 tccggaatgcatcagtcatgg 27114596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 2 - 339
Target Start/End: Complemental strand, 16513772 - 16513433
Alignment:
Q  2 acacccctaaataactaaaaaa-catttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagc 100  Q
    ||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||  |||||||||||||||| || |||||||||||||||     
T  16513772 acacccctaaaaaactaaaaaaacaattgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaaaattgaagcctatttatagt 16513674  T
Q  101 ctaaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaat--cgtccaaatccacaataatggctcataatctttctggagtt 198  Q
     ||||||||||  ||||||||| |||||||| ||||||||||||||||||||||  |  ||| |||| |||||||||||||||  |||||||||||||||    
T  16513673 ttaaaacaagtcataggtcattaatacagtcgatgaaaacgtgttagtggttgttgtaacgtacaaaaccacaataatggctctgaatctttctggagtt 16513574  T
Q  199 tatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggt 298  Q
    || ||||| ||||||||||||||||| | |||||||||| ||||||||||||| | ||||||||||||||||| || ||||| |||||||||||||||||    
T  16513573 tacattccggaatgtccttagccctataggaagtgccaacttttctctcgttcgccaccattatcgcattaatccggaaaatatattccggaaaacaggt 16513474  T
Q  299 gtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    ||||||| |  ||||||||||||| || |||||||||||||    
T  16513473 gtgcattccgtattttatattccgaaaagcatcagtcatgg 16513433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 2 - 347
Target Start/End: Original strand, 18808938 - 18809284
Alignment:
Q  2 acacccctaaataactaaaaaa--catttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatag 99  Q
    ||||||||||| ||||||||||  ||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||    
T  18808938 acacccctaaaaaactaaaaaaaacatttgaagaaaatgtaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagactatttatag 18809036  T
Q  100 cctaaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtg---gttgtaatcgtccaaatccacaataatggctcataatctttctggag 196  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||||||   ||||||| |||||||| | ||| |||||||||  |||||||  |||     
T  18809037 cctaaaacaagtcataggtcattaatacagtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacctacattaatggctctgaatcttttcggat 18809136  T
Q  197 tttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacag 296  Q
    |||| ||||||||  | | ||||||||||| |||||| ||| |||||||| ||||   ||||||||||||||||| || ||||| ||||| |||||||||    
T  18809137 tttacattccagatcgcctttagccctacaggaagtgtcaacttttctcttgttc---accattatcgcattaatccggaaaatatattctggaaaacag 18809233  T
Q  297 gtgtgcatttcagattttatattccggaatgcatcagtcatggtctgtggt 347  Q
     |||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  18809234 atgtgcattccagattttatattccggaatgcatcagtcatggtcggtggt 18809284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 12785113 - 12785451
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||    
T  12785113 acacccctaaaaaactaaaaaacatttgaagaaaatgtaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagattgaagcctatttatagcc 12785211  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtg---gttgtaatcgtccaaatccacaataatggctcataatctttctggagtt 198  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||   ||||||| |||||||| ||||| ||| ||||   |||||||| ||| ||    
T  12785212 taaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaacggctatgaatctttccggattt 12785311  T
Q  199 tatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggt 298  Q
    ||  |||||||||||||||| ||||||| ||||||||||  |||| ||||||||| || |||||||||||||| || ||||| ||||||||||||||| |    
T  12785312 tactttccagaatgtccttaaccctacaggaagtgccaa-ctttccctcgttcaccactattatcgcattaatccggaaaatatattccggaaaacagat 12785410  T
Q  299 gtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||| || |  ||| ||||||| ||||| ||||||||||||    
T  12785411 gtgctttccgaattatatattctggaatacatcagtcatgg 12785451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 12723630 - 12723968
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||| || |||||||||||||    
T  12723630 acacccctaaaaaactaaaaaacatttgaagaaaatgtaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatgaaaacctatttatagcc 12723728  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtg---gttgtaatcgtccaaatccacaataatggctcataatctttctggagtt 198  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||   ||||||| |||||||| ||||| ||| | ||   |||||||| ||| ||    
T  12723729 taaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaacgactatgaatctttccggattt 12723828  T
Q  199 tatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggt 298  Q
    ||  |||||||||||||||||||||||| ||||||||||  |||| ||||||||| || |||||||||||||| || ||||| ||||||||||||||| |    
T  12723829 tactttccagaatgtccttagccctacaggaagtgccaa-ctttccctcgttcaccactattatcgcattaatccggaaaatatattccggaaaacagat 12723927  T
Q  299 gtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||| || |  ||| ||||||| ||||| ||||||||||||    
T  12723928 gtgctttccgaattatatattctggaatacatcagtcatgg 12723968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 2 - 339
Target Start/End: Complemental strand, 13822251 - 13821915
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||| ||||||||||||||||||| |||||||||||||| ||||||||  ||||||||||||||||||||||| |||||||||||||    
T  13822251 acacccctaaaaaactagaaaacatttgaagaaaatgtaagaaaagaggtgaggtgaagaat-gaaggtatttgttgaagatggaaacctatttatagcc 13822153  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtgg---ttgtaatcgtccaaatccacaataatggctcataatctttctggagtt 198  Q
    ||||||||||  ||| ||||| |||||||||||||||||||||||||||   |||||| ||| |||||||||| |||||||||  |||||||| | | ||    
T  13822152 taaaacaagtcatagatcattaatacagtcaatgaaaacgtgttagtggttgttgtaaccgttcaaatccacattaatggctctgaatctttccgaattt 13822053  T
Q  199 tatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggt 298  Q
    || ||| | ||| | ||||||||||||| |||||| ||| ||||||||| |||   ||||||||||||||||| || ||||| ||||| |||||| || |    
T  13822052 tacatttcggaacgcccttagccctacaggaagtgtcaacttttctctcattc---accattatcgcattaatccggaaaatatattcaggaaaatagat 13821956  T
Q  299 gtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    ||||||| |||||||||||||| ||||||||||||||||||    
T  13821955 gtgcattccagattttatattctggaatgcatcagtcatgg 13821915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 2 - 291
Target Start/End: Original strand, 8197367 - 8197658
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||| |||| ||||||||||  ||||||||||||||||||||||||||||||||||| |    
T  8197367 acacccctaaaaaactaaaaaacatttgaagaaaatgtaagaaaataggtaaagtgaagaat-gaaggtatttgttgaagatggaagcctatttatagtc 8197465  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtg---gttgtaatcgtccaaatccacaataatggctcataatctttctggagtt 198  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||   ||||||| |||||||| ||||| |||||||||  |||||||| ||| ||    
T  8197466 taaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatggctctaaatctttccggattt 8197565  T
Q  199 tatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaa 291  Q
    || ||||  ||||||||||||||||| | ||||| |||| ||||| ||||||||| ||||||||||||||||| | |||||| ||||||||||    
T  8197566 tacattctggaatgtccttagccctataggaagtaccaacttttccctcgttcaccaccattatcgcattaatcccaaaaatatattccggaa 8197658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 2 - 269
Target Start/End: Complemental strand, 38679631 - 38679363
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||  | || |||||||||||||| |||||||||||||||||    
T  38679631 acacccctaaaaaactaaaaaacatttgaagaaaatgtaagaaaagaggtgaagtgaagaat-gtagatatttgttgaagattgaagcctatttatagcc 38679533  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtgg---ttgtaatcgtccaaatccacaataatggctcataatctttctggagtt 198  Q
    |||||||||| ||| |||||| |||||||||||| ||| ||||||||||   |||||| |||||||||||||| |||||||||  |||||||| ||| ||    
T  38679532 taaaacaagtcctaagtcattaatacagtcaatgcaaaagtgttagtggttgttgtaaccgtccaaatccacattaatggctctgaatctttccggattt 38679433  T
Q  199 tatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcatta 269  Q
    || ||||| ||||||||||||||||| | ||||||||||  |||| |||||| || |||||||||||||||    
T  38679432 tacattccggaatgtccttagccctataggaagtgccaa-ctttccctcgtttaccaccattatcgcatta 38679363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 37030426 - 37030262
Alignment:
Q  16 ctaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtacta 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  37030426 ctaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagtctatttatagcctaaaacaagtccta 37030328  T
Q  116 ggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctc 181  Q
    ||||||| ||||||||||||||||||||||||||||||||| | |||||| ||||| |||||||||    
T  37030327 ggtcattaatacagtcaatgaaaacgtgttagtggttgtaaccatccaaacccacattaatggctc 37030262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 26278994 - 26279155
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  26278994 acacccctaaaaaactaaaaa-catttgaagaaaatggaagaaaagaagtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttatagcc 26279091  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaa 165  Q
    |||||||||| || |||||||  |||||||||||||||||||||||||||||||| ||||||||    
T  26279092 taaaacaagtcctgggtcattagtacagtcaatgaaaacgtgttagtggttgtaaccgtccaaa 26279155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 2 - 181
Target Start/End: Original strand, 37883384 - 37883561
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||     
T  37883384 acacccctaaaaaactaaaaa-catttgaagaaaatggaagaaaagatgtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttatagct 37883481  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctc 181  Q
    ||||||||||  |||||||||  || ||||||||||||| ||||||||||||||| |||||||| ||||| |||||||||    
T  37883482 taaaacaagtcttaggtcattactatagtcaatgaaaacatgttagtggttgtaaccgtccaaacccacattaatggctc 37883561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 85 - 339
Target Start/End: Complemental strand, 8299319 - 8299062
Alignment:
Q  85 gaagcctatttatagcctaaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgt---aatcgtccaaatccacaataatggctc 181  Q
    |||| |||||||||||||||||||| |  ||||||||| ||||||||||| |||||||||| ||||||||   || ||| |||| ||| | ||||| |||    
T  8299319 gaagtctatttatagcctaaaacaattcttaggtcattaatacagtcaataaaaacgtgttggtggttgttgtaaccgttcaaacccaaattaatgactc 8299220  T
Q  182 ataatctttctggagtttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatc 281  Q
      |||||||| ||| |||| ||||| ||||||||||||||||| | |||||||||| ||||| ||||||||| |||||||||||||| || || |||||     
T  8299219 tgaatctttccggattttacattccggaatgtccttagccctataggaagtgccaacttttccctcgttcaccaccattatcgcatttatccggaaaata 8299120  T
Q  282 tattccggaaaacaggtgtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    ||||||||||||||| ||||| ||   |||| ||||||| | ||||||||||||||||    
T  8299119 tattccggaaaacagatgtgctttctggattatatattcagaaatgcatcagtcatgg 8299062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 19 - 165
Target Start/End: Complemental strand, 25977293 - 25977152
Alignment:
Q  19 aaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||    |||||||||||||||||||||||| |||||||||||| ||| ||    
T  25977293 aaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggt----gttgaagatggaagcctatttataacctaaaacaagtcctaagt 25977199  T
Q  119 cattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaa 165  Q
    ||||  |||||||||||||||||||||||||||||||||||||||||    
T  25977198 cattactacagtcaatgaaaacgtgttagtggttgtaatcgtccaaa 25977152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 19 - 165
Target Start/End: Complemental strand, 9715474 - 9715329
Alignment:
Q  19 aaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||| ||||||||||||||||| ||||  |||||    
T  9715474 aaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaagctatttgttgaagatggaagtctatttatagcctaaaaaaagtcataggt 9715376  T
Q  119 cattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaa 165  Q
    ||||  | ||||||||||||||||||| |||||||||| ||||||||    
T  9715375 cattagtgcagtcaatgaaaacgtgttggtggttgtaaccgtccaaa 9715329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 11720101 - 11719939
Alignment:
Q  19 aaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggt 118  Q
    |||||||||||||||||||| ||||||||||||||||||||  |  |||||||||||||||||||| ||| |||||||| |||||||| |||| ||||||    
T  11720101 aaaaacatttgaagaaaatgaaagaaaagaggtgaagtgaaagaatgaaggtatttgttgaagatgaaagtctatttatggcctaaaataagtcctaggt 11720002  T
Q  119 cattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctc 181  Q
    ||||  ||||||||||||||||||||||||||| |||| ||| |||| | ||| |||||||||    
T  11720001 cattagtacagtcaatgaaaacgtgttagtggtcgtaaccgttcaaacctacattaatggctc 11719939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 208 - 339
Target Start/End: Original strand, 37883609 - 37883737
Alignment:
Q  208 gaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttc 307  Q
    ||||| ||||||||||||| |||||||||| |||||||||||||||   ||||||||||||||| || ||||| ||||||| ||||||| |||||||| |    
T  37883609 gaatgcccttagccctacaggaagtgccaacttttctctcgttcac---cattatcgcattaatccggaaaatatattccgaaaaacagatgtgcattcc 37883705  T
Q  308 agattttatattccggaatgcatcagtcatgg 339  Q
     |||||||||||||||||||||||||||||||    
T  37883706 ggattttatattccggaatgcatcagtcatgg 37883737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 15858789 - 15858880
Alignment:
Q  14 aactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaa 106  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  15858789 aactaaaaaacatttgaagaaaatgtaagaaaagaggtgatgtgaagaat-gaaggtatttgttgaagatggaagcctatttatagcctaaaa 15858880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 2606166 - 2606076
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatt 94  Q
    ||||| ||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||    
T  2606166 acacctctaaaaaactaaaaa-catttgaagaaaatggaagaaaagatgtgaagtgaagaa-tgaaggtatttgttgaagatggaagcctatt 2606076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 8300935 - 8300857
Alignment:
Q  16 ctaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctattt 95  Q
    |||||| |||||||||||||||| ||||||||| |||||||||||||  | |||||||||||||||||||||| ||||||    
T  8300935 ctaaaagacatttgaagaaaatgtaagaaaagatgtgaagtgaagaa-tgtaggtatttgttgaagatggaagtctattt 8300857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 213 - 334
Target Start/End: Complemental strand, 11719886 - 11719768
Alignment:
Q  213 tccttagccctacaagaagtgccaa-tttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagat 311  Q
    |||||| |||| ||||||||||||| |||||| |||||     ||||||||||||||||| |||||||| ||||||||||||||| |||||||| | |||    
T  11719886 tccttaaccctgcaagaagtgccaactttttccctcgt----caccattatcgcattaatccgaaaaatatattccggaaaacagatgtgcattccggat 11719791  T
Q  312 tttatattccggaatgcatcagt 334  Q
    | ||| || |||| |||||||||    
T  11719790 tatatttttcggactgcatcagt 11719768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 27495146 - 27495261
Alignment:
Q  28 tgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcattgatac 127  Q
    ||||||||||| |||||||||||||||||||||||  ||||  | |||||||||||| ||| ||||||||||||| |||| |||  ||||| ||   |||    
T  27495146 tgaagaaaatgtaagaaaagaggtgaagtgaagaa-tgaagaaaattgttgaagatgaaagtctatttatagccttaaaccagtcataggtaataattac 27495244  T
Q  128 agtcaatgaaaacgtgt 144  Q
    ||||||  |||||||||    
T  27495245 agtcaactaaaacgtgt 27495261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 334
Target Start/End: Complemental strand, 25977083 - 25976965
Alignment:
Q  213 tccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagatt 312  Q
    |||||| |||||||||||||||||| ||||  |||||||||   |||||||| ||||||  | ||||| ||||||||||||||   || |||| | ||||    
T  25977083 tccttaaccctacaagaagtgccaactttttcctcgttcac---cattatcgtattaatctggaaaatatattccggaaaacaaaggtacattccggatt 25976987  T
Q  313 ttatattccggaatgcatcagt 334  Q
    |||| ||||||| |||||||||    
T  25976986 ttattttccggactgcatcagt 25976965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 212 - 334
Target Start/End: Original strand, 26279223 - 26279341
Alignment:
Q  212 gtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagat 311  Q
    ||||||| |||||||||||||||||| ||||| |||||||   |||||||||| |||||| || ||||  |||||| |||||||   ||||||| | |||    
T  26279223 gtccttaaccctacaagaagtgccaacttttccctcgttc---accattatcgtattaatccggaaaacgtattcc-gaaaacaaaggtgcattccggat 26279318  T
Q  312 tttatattccggaatgcatcagt 334  Q
    ||||| |||| ||||| ||||||    
T  26279319 tttattttccagaatgaatcagt 26279341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 111
Target Start/End: Original strand, 32695017 - 32695098
Alignment:
Q  30 aagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatg-gaagcctatttatagcctaaaacaagt 111  Q
    ||||||| | |||||||||||||||||||| ||  ||||| ||||||||||||||  ||||||||||||| ||| ||||||||    
T  32695017 aagaaaaagtaagaaaagaggtgaagtgaa-aaatgaaggaatttgttgaagatgcaaagcctatttataaccttaaacaagt 32695098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 22911931 - 22911851
Alignment:
Q  26 tttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaac 107  Q
    ||||||||||||| ||||||||| |||  ||||||||  ||||| ||||| ||||||||||| |||||| ||||||| ||||    
T  22911931 tttgaagaaaatgtaagaaaagaagtgtggtgaagaat-gaaggaatttgatgaagatggaaacctattgatagccttaaac 22911851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 9715219 - 9715144
Alignment:
Q  255 accattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagattttatattccggaatgcat 330  Q
    |||||||||| |||||| || ||||| ||||||||||| ||   ||||||| | |||||||| |||||||||||||    
T  9715219 accattatcgtattaatccggaaaatatattccggaaatcaaaagtgcattccggattttattttccggaatgcat 9715144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 111
Target Start/End: Original strand, 23252461 - 23252541
Alignment:
Q  30 aagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 111  Q
    ||||||| | |||||||||||| ||||||||||  ||||| ||||||| |||||| |||  ||||||||| |||||| ||||    
T  23252461 aagaaaacgtaagaaaagaggtaaagtgaagaa-tgaaggaatttgtttaagatgcaagtttatttatagtctaaaataagt 23252541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 27690604 - 27690513
Alignment:
Q  9 taaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcct 102  Q
    |||| ||||||||||  ||| ||||||||| ||||||||| | |||||||||||  ||| | | |||||||||||| |||| ||||||||||||    
T  27690604 taaaaaactaaaaaatgttt-aagaaaatgtaagaaaagatgggaagtgaagaat-gaatgaaattgttgaagatgcaagcatatttatagcct 27690513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 41616163 - 41616070
Alignment:
Q  26 tttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcatt 122  Q
    ||||||||||||| |||||| |||||||||  || ||  ||||| |  ||||||||||  |||||| ||||||||||||||||| | ||||||||||    
T  41616163 tttgaagaaaatgtaagaaaggaggtgaag--aataat-gaaggaaaatgttgaagatccaagcctttttatagcctaaaacaaatcctaggtcatt 41616070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 37030226 - 37030170
Alignment:
Q  197 tttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcac 253  Q
    |||| ||||| ||||||||||||| ||| | |||||||||| ||||| |||||||||    
T  37030226 tttacattccggaatgtccttagctctataggaagtgccaacttttccctcgttcac 37030170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 203; Significance: 1e-111; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 4 - 338
Target Start/End: Original strand, 31271310 - 31271643
Alignment:
Q  4 acccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagccta 103  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||  ||| |||||||||||||||||||||||||||||||||||    
T  31271310 acccctaaaaaactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaaaaat-gaaagtatttgttgaagatggaagcctatttatagccta 31271408  T
Q  104 aaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttatat 203  Q
    ||||||||  ||||||||| ||||||| ||||||||||||| |||||||||||||||||||| ||||| |||||||||  |||||||| ||| |||| ||    
T  31271409 aaacaagtcataggtcattaatacagttaatgaaaacgtgtaagtggttgtaatcgtccaaacccacattaatggctctgaatctttcgggattttacat 31271508  T
Q  204 tccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgca 303  Q
    ||| ||||||| ||||| ||| | |||||||||| ||||| ||||||||| ||||||||| ||||||| || ||||| ||||||||||||||| |||| |    
T  31271509 tccggaatgtcgttagcactagaggaagtgccaacttttccctcgttcaccaccattatcacattaatccggaaaatatattccggaaaacagatgtgga 31271608  T
Q  304 tttcagattttatattccggaatgcatcagtcatg 338  Q
    || ||||||||||||||||||||||||||||||||    
T  31271609 ttccagattttatattccggaatgcatcagtcatg 31271643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 303713 - 304051
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||    
T  303713 acacccctaaaaaactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaaaatggaagcctatttatagcc 303811  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttg---taatcgtccaaatccacaataatggctcataatctttctggagtt 198  Q
    |||||||||| |||||||||| ||||| |||||||||||||||| |||||||   ||| ||||||||   ||| ||||| |||  ||| ||||||||| |    
T  303812 taaaacaagtcctaggtcattaatacaatcaatgaaaacgtgttggtggttgttataaccgtccaaacttacattaatgactctgaatgtttctggagct 303911  T
Q  199 tatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggt 298  Q
    || ||||| |||| |||||||||||||| |||||||||| ||||||||||||| | | |||||||||| |||| || ||||| |||||||||||||| ||    
T  303912 tacattccggaatttccttagccctacaggaagtgccaacttttctctcgttc-ccatcattatcgcaataatccggaaaatatattccggaaaacaagt 304010  T
Q  299 gtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||||||   |||||||||||||||||||||||||||||||    
T  304011 gtgcattctggattttatattccggaatgcatcagtcatgg 304051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 16395274 - 16395613
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||| |||||||||||||||||||||    
T  16395274 acacccctaaaaaactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaagtatttgttgacgatggaagcctatttatagcc 16395372  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgt---aatcgtccaaatccacaataatggctcataatctttctggagtt 198  Q
    |||||||||| ||| |||||| ||| |||||||||||||||||||||||||||   || | |||||| ||||| ||||||||   ||| |||| ||| ||    
T  16395373 taaaacaagtcctatgtcattaatatagtcaatgaaaacgtgttagtggttgttgtaaccatccaaacccacattaatggctttgaatatttccggattt 16395472  T
Q  199 tatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggt 298  Q
    || ||| | ||||||||||||||||| | |||||||||| ||||| ||||||||| ||||||||||||| ||| |||||||| ||||| ||||||||  |    
T  16395473 tacatttcggaatgtccttagccctataggaagtgccaacttttccctcgttcaccaccattatcgcatcaatccgaaaaatatattctggaaaacaaat 16395572  T
Q  299 gtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||| || | |||| ||||||||||||||||||||||||||    
T  16395573 gtgctttccggattatatattccggaatgcatcagtcatgg 16395613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 438990 - 439329
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    |||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||    
T  438990 acactcctaaaaaactaaaaaacatttgaagaaaatgtaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagtctatttatagcc 439088  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgt---aatcgtccaaatccacaataatggctcataatctttctggagtt 198  Q
    |||||||||| ||||||||||  || |||||| ||||||||||||||||||||   || |||||||| ||||| ||||| ||   |||||||  ||| ||    
T  439089 taaaacaagtcctaggtcattagtatagtcaacgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatgactttgaatcttttcggattt 439188  T
Q  199 tatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggt 298  Q
    || ||||| ||||||||||||||||| | ||||||| |||||||| ||||||||| ||||||||||||||||| |||||||| ||||  ||||||||  |    
T  439189 tacattccggaatgtccttagccctataggaagtgctaatttttccctcgttcaccaccattatcgcattaatccgaaaaatatattatggaaaacatat 439288  T
Q  299 gtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||| ||   |||| |||||||||||||||||| |||||||    
T  439289 gtgctttctggattatatattccggaatgcatcggtcatgg 439329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 2 - 339
Target Start/End: Complemental strand, 31723050 - 31722725
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||| ||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||  |||||| ||||||||||||||||||||||||||||||    
T  31723050 acaccgctaaaaaactaaaaaacatttgaagaaaatgtaagaaaagagatgaagtgaagaat-gaaggtctttgttgaagatggaagcctatttatagcc 31722952  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtgg---ttgtaatcgtccaaatccacaataatggctcataatctttctggagtt 198  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||   |||||| | |||||| ||||| |||||||||  |||||              
T  31722951 taaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgttgtaaccatccaaacccacattaatggctctgaatct---------- 31722862  T
Q  199 tatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggt 298  Q
        |||| |||||||||||||||||   |||||||||| ||||| ||||||  | ||| ||||||||||||| || ||||| ||||||||||||||| |    
T  31722861 ----ttccggaatgtccttagccctatgggaagtgccaacttttccctcgtttgccacccttatcgcattaatccggaaaatatattccggaaaacagat 31722766  T
Q  299 gtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||| || |||||| ||||||||||||||||||||||||||    
T  31722765 gtgctttccagattatatattccggaatgcatcagtcatgg 31722725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 4 - 338
Target Start/End: Complemental strand, 9305129 - 9304800
Alignment:
Q  4 acccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagccta 103  Q
    ||||||||| ||||||||| |||||||||||||||||| |||||||||||||||| |||  ||||||||||||| ||| |  ||||||||||||||||||    
T  9305129 acccctaaaaaactaaaaa-catttgaagaaaatggaataaaagaggtgaagtgatgaat-gaaggtatttgtttaaggtaaaagcctatttatagccta 9305032  T
Q  104 aaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttatat 203  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||  |||||||| ||| |||| ||    
T  9305031 aaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgtaaccgtcaaaacccacaataatggctctgaatctttccggattttacat 9304932  T
Q  204 tccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgca 303  Q
    ||| ||| ||| ||||||||||| ||||||||||  | || |||||||    |||||||||||||||| || ||||  |||||||||||| |   || ||    
T  9304931 tccggaacgtcattagccctacaggaagtgccaacctctccctcgttc---gccattatcgcattaatccggaaaacatattccggaaaataaaggtaca 9304835  T
Q  304 tttcagattttatattccggaatgcatcagtcatg 338  Q
    || |  ||||||| |||||||||| ||||||||||    
T  9304834 ttccgtattttattttccggaatgtatcagtcatg 9304800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 31318517 - 31318672
Alignment:
Q  26 tttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcattgat 125  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||  |    
T  31318517 tttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatgaaagcctatttatagcctaaaacaagtcctaggtcattact 31318615  T
Q  126 acagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctca 182  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||    
T  31318616 acagtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatggctca 31318672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 165
Target Start/End: Original strand, 20818508 - 20818653
Alignment:
Q  19 aaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggt 118  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||  ||||| ||||||||||||||||||  ||||||||| |||||| ||||  || ||    
T  20818508 aaaaacaattgaagaaaatgtaagaaaagaggtgaagtaaagaat-gaaggaatttgttgaagatggaagtatatttatagtctaaaataagtcatacgt 20818606  T
Q  119 cattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaa 165  Q
    |||   |||| |||||||||||||||| |||||  ||| ||||||||    
T  20818607 cataagtacaatcaatgaaaacgtgtttgtggtgctaaccgtccaaa 20818653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 197 - 287
Target Start/End: Original strand, 31318708 - 31318795
Alignment:
Q  197 tttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattcc 287  Q
    |||| ||||| || ||||||||||||||||||||||||||| ||||| ||||||   |||||||||||||||||| |||||||| ||||||    
T  31318708 tttacattccggagtgtccttagccctacaagaagtgccaacttttccctcgtt---aaccattatcgcattaatccgaaaaatatattcc 31318795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 106
Target Start/End: Original strand, 28546865 - 28546934
Alignment:
Q  35 aatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaa 106  Q
    |||| |||||| |||||||||||||||| |  ||| | |||||||||||  |||||||||||||||||||||    
T  28546865 aatgtaagaaaggaggtgaagtgaagaata--aggaaattgttgaagattcaagcctatttatagcctaaaa 28546934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 62
Target Start/End: Complemental strand, 6837350 - 6837318
Alignment:
Q  30 aagaaaatggaagaaaagaggtgaagtgaagaa 62  Q
    ||||||||| |||||||||||||||||||||||    
T  6837350 aagaaaatgtaagaaaagaggtgaagtgaagaa 6837318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 17519837 - 17519920
Alignment:
Q  27 ttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 111  Q
    |||||||||| | ||| |||||| ||||||||||||  || || |||| ||||| ||| || | |||||||||||||||||||||    
T  17519837 ttgaagaaaaagtaaggaaagagatgaagtgaagaatgga-ggaatttcttgaacatgcaaacatatttatagcctaaaacaagt 17519920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 202; Significance: 1e-110; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 2 - 339
Target Start/End: Complemental strand, 17137888 - 17137546
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcct----atttat 97  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||    ||||||    
T  17137888 acacccctaaaaaactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatagaagcctgtttatttat 17137790  T
Q  98 agcctaaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgt---aatcgtccaaatccacaataatggctcataatctttctgg 194  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||   || |||||||| ||||| |||||||||  ||| |||| ||    
T  17137789 agcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatggctctaaatgtttccgg 17137690  T
Q  195 agtttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaac 294  Q
    |||||| ||||| ||||||||||||| ||||| |||||||||| ||||||||||||| || ||||||||||| ||| ||||||||| ||||| |||||||    
T  17137689 agtttacattccggaatgtccttagctctacaggaagtgccaacttttctctcgttccca-ccattatcgcaataaatcgaaaaatatattctggaaaac 17137591  T
Q  295 aggtgtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||    
T  17137590 aggtgtgcatttcggattttatattccagaatgcatcagtcatgg 17137546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 17308916 - 17309254
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||    
T  17308916 acacccctaaaaaactaaaaaacaattgaagaaaatgtaagaaaagaggtgaagtgaagaat-gaaggtatttgt-gaagatggaagcctatttatagcc 17309013  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgt---aatcgtccaaatccacaataatggctcataatctttctggagtt 198  Q
     |||||||||  ||||||||| |||||||||||||||||||||||||||||||   || |||||||| ||||| |||||||||  |||||||| ||| ||    
T  17309014 gaaaacaagtcataggtcattaatacagtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatggctctgaatctttccggattt 17309113  T
Q  199 tatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggt 298  Q
    || ||||| ||||||||||||||||| | ||||||| || ||||| ||||||||| ||||||||||||||||| |||||||| ||||||||||| ||| |    
T  17309114 tacattccggaatgtccttagccctataggaagtgctaacttttccctcgttcaccaccattatcgcattaatccgaaaaatatattccggaaaccagat 17309213  T
Q  299 gtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||| || | |||| ||||||||||||||||||||||||||    
T  17309214 gtgctttccggattatatattccggaatgcatcagtcatgg 17309254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 6404074 - 6404409
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||    
T  6404074 acacccctaaataactaaaaaacatttgaagaaaatgtaagaaaagaggtgatgtgaagaat-gaaggtatttgttgaagatggaagcctatttatagcc 6404172  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttat 201  Q
    |||||||||| |||||||||| |||| ||||| |||||||||||||||||||||| |||||||| || || |||||||||  ||||||||  || |||||    
T  6404173 taaaacaagtcctaggtcattaatacggtcaacgaaaacgtgttagtggttgtaaccgtccaaacccgcattaatggctctaaatctttcccgattttat 6404272  T
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||||| ||||||||||| ||||||| |||||| ||| |||||||| |||||| | ||||||||||||||| ||  |||  |||||| |||||||| ||||    
T  6404273 attccggaatgtccttaaccctacaggaagtg-caacttttctcttgttcaccatcattatcgcattaatccggtaaacatattccagaaaacagatgtg 6404371  T
Q  302 catttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||| | |||| |||||||| |||||||||||||||||    
T  6404372 cattccggattgtatattccagaatgcatcagtcatgg 6404409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 2 - 339
Target Start/End: Complemental strand, 38703765 - 38703427
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||    
T  38703765 acacccctaaaaaactgaaaaacatttgaagaaaatgtaagaaaagaggtgaagtgaagaata-aaggtatttgttgaagatggaagcc-atttatagcc 38703668  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgt---aatcgtccaaatccacaataatggctcataatctttctggagtt 198  Q
    ||||| |||| |||||||||| |||||||||||||||||||||||||||||||   || |||||||| ||||| ||||| |||  |||||||| ||| ||    
T  38703667 taaaagaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatgactctgaatctttccggattt 38703568  T
Q  199 tatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggt 298  Q
    || ||||| |||||||||||||| || | |||||||||| ||||| ||||||||| ||||||||||||||||| |  ||||| ||||||||||||||  |    
T  38703567 tacattccggaatgtccttagccttataggaagtgccaacttttccctcgttcaccaccattatcgcattaatccagaaaatatattccggaaaacatat 38703468  T
Q  299 gtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||| || |||||| ||||||||||||||||||||||||||    
T  38703467 gtgctttccagattatatattccggaatgcatcagtcatgg 38703427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 2 - 339
Target Start/End: Complemental strand, 30490859 - 30490521
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| |||||||||||||||||| |||||| |||||||||| ||| ||||||||  | |||||||||||||||||| |||||||||||| |||    
T  30490859 acacccctaaaaaactaaaaaacatttgaaaaaaatgtaagaaaagagctgaggtgaagaat-gtaggtatttgttgaagatgaaagcctatttatggcc 30490761  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtgg---ttgtaatcgtccaaatccacaataatggctcataatctttctggagtt 198  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||   |||||| |||||||| ||||| |||||||||  |||||||||||| ||    
T  30490760 taaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatggctctgaatctttctggattt 30490661  T
Q  199 tatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggt 298  Q
    || ||||| ||||||||||||||||| | |||||| |||  |||| | ||||||| ||||||||||||||||| || ||||| ||||||||||||||| |    
T  30490660 tacattccggaatgtccttagccctataggaagtgtcaa-ctttcacacgttcaccaccattatcgcattaatccggaaaatatattccggaaaacagat 30490562  T
Q  299 gtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||| || |||||| |||||| |||||||||||||||||||    
T  30490561 gtgctttccagattatatatttcggaatgcatcagtcatgg 30490521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 45117029 - 45117369
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaag-------atggaagcctatt 94  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||       |||||||||||||    
T  45117029 acacccctaaaaaactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaagtatttgttgaagatggaagatggaagcctatt 45117127  T
Q  95 tatagcctaaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctgg 194  Q
    |||||||||||||||||  ||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||| ||| |||||  |||||||||||    
T  45117128 tatagcctaaaacaagtcttaggtcattaatagagtcaatgaaaacgtgttagtggttgtaaccgtccaaatccacattaacggctctgaatctttctgg 45117227  T
Q  195 agtttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaac 294  Q
    | |||| ||||  ||||||||||||||||| | |||||||||| ||||| |||||||   |||||||| ||||||||| | ||||  |||||||||||||    
T  45117228 attttacattcttgaatgtccttagccctaaaggaagtgccaacttttccctcgttc---accattattgcattaatttggaaaacatattccggaaaac 45117324  T
Q  295 aggtgtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    || |||| ||| | || ||||||||| | ||||||||||| ||||    
T  45117325 agatgtgtattccggagtttatattctgaaatgcatcagttatgg 45117369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 2 - 277
Target Start/End: Original strand, 44760051 - 44760325
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||| ||  |||||||| | |||||||||||||| |||||||||||    
T  44760051 acacccctaaaaaactaaaaaacatttgaagaaaatgtaagaaaagaggtgatgtgaataat-gaaggtatatcttgaagatggaagcttatttatagcc 44760149  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttat 201  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||  |||||||| ||| |||||    
T  44760150 taaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatggctctgaatctttccggattttat 44760249  T
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaa 277  Q
    ||| | ||||||||||||||||||| ||||||||||  |||  ||||||||| ||||||||||||||||| |||||    
T  44760250 atttcggaatgtccttagccctacaggaagtgccaaccttttcctcgttcaccaccattatcgcattaatccgaaa 44760325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 16 - 264
Target Start/End: Original strand, 15911748 - 15911998
Alignment:
Q  16 ctaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtacta 115  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  15911748 ctaaaaaacatttgaagaaaatgtaagaaaagaggtgaagtgaagaatc-aaggtatttgttgaagatggaagcctatttatagcctaaaacaagtccta 15911846  T
Q  116 ggtcattgatacagtcaatgaaaacgtgttagtg---gttgtaatcgtccaaatccacaataatggctcataatctttctggagtttatattccagaatg 212  Q
    ||||||| |||||||||||||||| |||||||||   ||||||| |||||||| ||||| |||||||||  |||||||| ||| |||| ||||| |||||    
T  15911847 ggtcattaatacagtcaatgaaaatgtgttagtggttgttgtaaccgtccaaacccacattaatggctctgaatctttccggattttacattccggaatg 15911946  T
Q  213 tccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcg 264  Q
    |||||||||||| | |||||||||| ||||| ||||||||| ||||||||||    
T  15911947 tccttagccctataggaagtgccaacttttccctcgttcaccaccattatcg 15911998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 2 - 181
Target Start/End: Original strand, 13278653 - 13278830
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  13278653 acacccctaaaaaactaaaaa-catttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttatagcc 13278750  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctc 181  Q
    |||||||||| ||  |||||| ||||||||||||||||||||||||||||||||| |||||||  ||||| |||||||||    
T  13278751 taaaacaagtcctttgtcattaatacagtcaatgaaaacgtgttagtggttgtaaccgtccaaccccacattaatggctc 13278830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 31994239 - 31994078
Alignment:
Q  19 aaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggt 118  Q
    |||||||||||||||||||||||||||||||||||||||| |||  |||| ||||||||||| |||||| ||||||||||||||||||||||| ||||||    
T  31994239 aaaaacatttgaagaaaatggaagaaaagaggtgaagtgatgaat-gaagatatttgttgaatatggaaacctatttatagcctaaaacaagtcctaggt 31994141  T
Q  119 cattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctc 181  Q
    ||||  |||||||||||||||||||||||||||||||| |||||||| | ||| |||||||||    
T  31994140 cattactacagtcaatgaaaacgtgttagtggttgtaaccgtccaaacctacattaatggctc 31994078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 2 - 171
Target Start/End: Complemental strand, 1210109 - 1209942
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||| |||||||||||||  | |||||||||| |||||||||||||||||||||||     
T  1210109 acacccctaaaaaactaaaaat-atttgaagaaaatggaagaaaagatgtgaagtgaagaat-gcaggtatttgtcgaagatggaagcctatttatagct 1210012  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccaca 171  Q
    |||||||||| |||||||||| ||| ||||||||||||||||||||||||||||| |||||||| |||||    
T  1210011 taaaacaagtcctaggtcattaataaagtcaatgaaaacgtgttagtggttgtaaccgtccaaacccaca 1209942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 7942904 - 7942743
Alignment:
Q  19 aaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggt 118  Q
    ||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||| || |||||||| |||||||||| ||||||    
T  7942904 aaaaacatttgaagaaaatggaagaaaagaggtgaagtgaacaat-gaaggtatttgttgaagatggaagtctgtttatagcataaaacaagtcctaggt 7942806  T
Q  119 cattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctc 181  Q
    | ||  |||||||||||||||| ||||||||||||||| |||||||| | ||| |||||||||    
T  7942805 ccttactacagtcaatgaaaacatgttagtggttgtaaccgtccaaacctacattaatggctc 7942743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 18137548 - 18137706
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| || ||||||||||||  |||||||||||||||||||  ||||||||||||||||    
T  18137548 acacccctaaaaaactaaaaa-catttgaagaaaatggaagaaaaaagatgaagtgaagaat-gaaggtatttgttgaagataaaagcctatttatagcc 18137645  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtcc 162  Q
    ||||| |||| ||||||||||  |||| ||||||||||||||||||||||||||| |||||    
T  18137646 taaaataagtcctaggtcattagtacaatcaatgaaaacgtgttagtggttgtaaccgtcc 18137706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 127
Target Start/End: Original strand, 38207443 - 38207567
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||| |||| |||||||||||    
T  38207443 acacccctaaaaaactaaaaaacatttgaagaaaatgtaagaaaagaggtgaagtgaagaa-tgaaggtatttgttgaagatgtaagcatatttatagcc 38207541  T
Q  102 taaaacaagtactaggtcattgatac 127  Q
    |||||||||| |||||||||| ||||    
T  38207542 taaaacaagtcctaggtcattaatac 38207567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 124 - 339
Target Start/End: Original strand, 38208411 - 38208626
Alignment:
Q  124 atacagtcaatgaaaacgtgttagtggttgt---aatcgtccaaatccacaataatggctcataatctttctggagtttatattccagaatgtccttagc 220  Q
    |||| ||||||||||||||||||||||||||   || |||||||| ||||| |||||||||  ||||||||  || |||| ||||| ||| | |||||||    
T  38208411 atacggtcaatgaaaacgtgttagtggttgttgcaaccgtccaaacccacattaatggctctgaatctttccagattttacattccggaacgcccttagc 38208510  T
Q  221 cctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagattttatattc 320  Q
    |||| | |||||| ||| |||||||||||||||   |||||| |||||||| || ||||| ||||||| ||||||| |||||||| | |||||||||||     
T  38208511 cctataggaagtgtcaacttttctctcgttcac---cattattgcattaatccggaaaatatattccgaaaaacagatgtgcattccggattttatattt 38208607  T
Q  321 cggaatgcatcagtcatgg 339  Q
    |||||||||||||||||||    
T  38208608 cggaatgcatcagtcatgg 38208626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 187 - 336
Target Start/End: Complemental strand, 1209904 - 1209759
Alignment:
Q  187 ctttctggagtttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattc 286  Q
    ||||||||| |||| ||||| ||| |||||||||||| ||||||| ||||| ||||| |||||||   ||||||||||||||||| |||||||| |||||    
T  1209904 ctttctggattttacattccggaacgtccttagccctccaagaagggccaacttttccctcgttc---accattatcgcattaatccgaaaaatatattc 1209808  T
Q  287 cggaaaacaggtgtgcatttcagattttatattccggaatgcatcagtca 336  Q
    ||| |||||| |||||||| | ||||||||||||||||||||||||||||    
T  1209807 cgg-aaacagatgtgcattccggattttatattccggaatgcatcagtca 1209759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 211 - 336
Target Start/End: Original strand, 13278881 - 13279003
Alignment:
Q  211 tgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcaga 310  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||   |||||||||| || ||||||||  |||||||||||||  |||||||| | ||    
T  13278881 tgtccttagccctacaagaagtgccaacttttccctcgctcacaa---ttatcgcattcatccgaaaaataaattccggaaaacacatgtgcattccgga 13278977  T
Q  311 ttttatattccggaatgcatcagtca 336  Q
    ||||||||||||||||||||||||||    
T  13278978 ttttatattccggaatgcatcagtca 13279003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 212 - 334
Target Start/End: Original strand, 1115287 - 1115406
Alignment:
Q  212 gtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagat 311  Q
    ||||||| |||||||||||||| ||| |||||||||||||||   |||||||| ||||||||| ||||| ||||| ||||||||   ||||||| |||||    
T  1115287 gtccttaaccctacaagaagtgtcaacttttctctcgttcac---cattatcgtattaattcggaaaatatattctggaaaacaaaggtgcattccagat 1115383  T
Q  312 tttatattccggaatgcatcagt 334  Q
    ||||| |||||||||||||||||    
T  1115384 tttattttccggaatgcatcagt 1115406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 145
Target Start/End: Complemental strand, 21485412 - 21485295
Alignment:
Q  27 ttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcattgata 126  Q
    |||||||||||| |||||||||||||||||||||||  ||| | |||||||||| ||| |||| ||||||||||||||||||||| |||||||||   ||    
T  21485412 ttgaagaaaatgtaagaaaagaggtgaagtgaagaat-gaaagaatttgttgaatatgaaagcttatttatagcctaaaacaagtcctaggtcataagta 21485314  T
Q  127 cagtcaatgaaaacgtgtt 145  Q
    || ||||| ||||||||||    
T  21485313 caatcaataaaaacgtgtt 21485295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 65 - 148
Target Start/End: Original strand, 1114728 - 1114811
Alignment:
Q  65 gaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagt 148  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||  || ||||||||||||||| |||||    
T  1114728 gaaggtatttgttgaagatgaaagcctatttatagcttaaaacaagtcctaggtcattagtatagtcaatgaaaacgtattagt 1114811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 33945914 - 33946004
Alignment:
Q  30 aagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcat 121  Q
    ||||||| | |||||||| ||||||||||||||  ||||| |||||||||||||| || ||||| ||||||||||||||||| |||| ||||    
T  33945914 aagaaaaagtaagaaaagtggtgaagtgaagaat-gaaggaatttgttgaagatgcaaacctatatatagcctaaaacaagtcctagatcat 33946004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 24168498 - 24168594
Alignment:
Q  25 atttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcatt 122  Q
    |||||||||||||| |||||||||| | |||||||||  | |||| ||||| |||| ||| ||| |||||||||||||||||||||| || |||||||    
T  24168498 atttgaagaaaatgaaagaaaagagcttaagtgaagagta-aaggaatttggtgaacatgcaagtctatttatagcctaaaacaagtgcttggtcatt 24168594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 334
Target Start/End: Complemental strand, 7942691 - 7942573
Alignment:
Q  213 tccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagatt 312  Q
    ||||||||| ||||||||||||||| ||||  |||||||||   |||||||| |||| | || ||||| |||||||||| |||   || |||| | ||||    
T  7942691 tccttagccatacaagaagtgccaactttttcctcgttcac---cattatcgtattagtccggaaaatatattccggaacacaaaggtacattccggatt 7942595  T
Q  313 ttatattccggaatgcatcagt 334  Q
    |||| |||||||||||||||||    
T  7942594 ttattttccggaatgcatcagt 7942573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 16739548 - 16739457
Alignment:
Q  27 ttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcatt 122  Q
    |||||||||||| ||||||||||||||   |||||| | |||| |  ||||||||||  |||||| ||||||||||||||||||| ||||||||||    
T  16739548 ttgaagaaaatgtaagaaaagaggtga---gaagaata-aaggaaaatgttgaagatccaagcctttttatagcctaaaacaagtcctaggtcatt 16739457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 37128055 - 37127963
Alignment:
Q  19 aaaaacat-ttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 111  Q
    |||||||| |||||||||| | ||||||| |||||||||||||||  ||| | ||||||| || ||| |||| |||||||||||||||||||||    
T  37128055 aaaaacatgttgaagaaaaagtaagaaaataggtgaagtgaagaat-gaaagaatttgttaaaaatgcaagcttatttatagcctaaaacaagt 37127963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 21649821 - 21649746
Alignment:
Q  40 aagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactag 116  Q
    ||||||| |||||||||||||||  ||||  ||||| |||||||||||| ||||||||||||| |||||||| ||||    
T  21649821 aagaaaaaaggtgaagtgaagaat-gaagaaatttgatgaagatggaagactatttatagccttaaacaagtcctag 21649746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 18963339 - 18963410
Alignment:
Q  30 aagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcct 102  Q
    ||||||||| |||||| ||||||||||||||||  ||||| | |||||||||||  |||||| ||||||||||    
T  18963339 aagaaaatgtaagaaaggaggtgaagtgaagaa-tgaaggaaattgttgaagatccaagcctttttatagcct 18963410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 334
Target Start/End: Complemental strand, 31994025 - 31993907
Alignment:
Q  213 tccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagatt 312  Q
    ||||| ||||||||||||||| ||| ||||| || ||||   |||||||| | |||||| || ||||| |||||||||| |||   || |||| | ||||    
T  31994025 tccttggccctacaagaagtgtcaacttttcccttgttc---accattattgtattaatccggaaaatatattccggaacacaaaggtacattccggatt 31993929  T
Q  313 ttatattccggaatgcatcagt 334  Q
    |||| ||||||||| |||||||    
T  31993928 ttattttccggaatacatcagt 31993907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 339
Target Start/End: Original strand, 45234447 - 45234528
Alignment:
Q  258 attatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||||||||||||| |  |||||  |||| ||||||||  ||||| || | |||| ||||||||||||||||||| ||||||    
T  45234447 attatcgcattaatccagaaaataaattctggaaaacaaatgtgctttccggattatatattccggaatgcatcaatcatgg 45234528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 5939239 - 5939191
Alignment:
Q  7 cctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaag 55  Q
    |||||| |||||||||| | |||||||||||| |||||| |||||||||    
T  5939239 cctaaaaaactaaaaaaaagttgaagaaaatgtaagaaaggaggtgaag 5939191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 6 - 347
Target Start/End: Original strand, 46254829 - 46255168
Alignment:
Q  6 ccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaa 105  Q
    ||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  46254829 ccctaaaaaactaaaaa-catttgaagaaaatgtaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttatagcctaaa 46254926  T
Q  106 acaagtactaggtcattgatacagtcaatgaaaacgtgttagtg---gttgtaatcgtccaaatccacaataatggctcataatctttctggagtttata 202  Q
    |||||| |||||||||| ||||||||||||||||||||||||||   ||||||| |||||||| ||||| |||||||||  |||||||||||| |||| |    
T  46254927 acaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatggctctgaatctttctggattttaca 46255026  T
Q  203 ttccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgc 302  Q
    |||| ||| | ||||||||||||| |||||| ||| |||||||||||||   ||||||||||||||||| || ||||| ||||||||||||||| |||||    
T  46255027 ttccggaacgcccttagccctacatgaagtgtcaacttttctctcgttc---accattatcgcattaatccggaaaatatattccggaaaacagatgtgc 46255123  T
Q  303 atttcagattttatattccggaatgcatcagtcatggtctgtggt 347  Q
    ||| |  |||||||||||||||||||||||||||||||| |||||    
T  46255124 attccgaattttatattccggaatgcatcagtcatggtcggtggt 46255168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 2 - 339
Target Start/End: Complemental strand, 25529285 - 25528952
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||   ||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  25529285 acacccctaaaaaaactaaaaatatttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttatagcc 25529187  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttat 201  Q
    |||||||||| |||||||||| ||||| |||||||| |||||| ||||||||||| |||||||| ||||| ||||| |||  |||||||||||| ||||     
T  25529186 taaaacaagtcctaggtcattaatacaatcaatgaatacgtgtcagtggttgtaaccgtccaaacccacattaatgactctgaatctttctggattttac 25529087  T
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||||  ||||||||||||||||||| |||||||||| ||||| |||||||   ||||||||||||| ||| || ||||| ||||||||||||||| ||||    
T  25529086 attctggaatgtccttagccctacaggaagtgccaacttttccctcgttc---accattatcgcatgaatccggaaaatgtattccggaaaacagatgtg 25528990  T
Q  302 catttcagattttatattccggaatgcatcagtcatgg 339  Q
    ||||  ||||||||||||||||||||||||||||||||    
T  25528989 cattctagattttatattccggaatgcatcagtcatgg 25528952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 2 - 338
Target Start/End: Original strand, 33950889 - 33951227
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||| | |||||||||||||||||| ||| | |||||||||||    
T  33950889 acacccctaaaaaactaaaaaacatttgaagaaaatgtaagaaaagaggtaaagtgaagaata-aaggtatttgttgaagatagaaacttatttatagcc 33950987  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgt---aatcgtccaaatccacaataatggctcataatctttctggagtt 198  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||   || | |||||| ||||| |||||||||  |||| ||| ||| ||    
T  33950988 taaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgttgtaaccatccaaacccacattaatggctctgaatcgttccggattt 33951087  T
Q  199 tatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggt 298  Q
    || ||||| ||||||||||||||||| | |||||||||| ||||||||||||||| ||||||||| ||||||| |||||||| |||||| |||||||| |    
T  33951088 tacattccggaatgtccttagccctataggaagtgccaacttttctctcgttcaccaccattatctcattaatccgaaaaatatattccagaaaacagat 33951187  T
Q  299 gtgcatttcagattttatattccggaatgcatcagtcatg 338  Q
    |||| || |||||| |||||||||||||||||||||||||    
T  33951188 gtgctttccagattatatattccggaatgcatcagtcatg 33951227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 2 - 347
Target Start/End: Original strand, 43458146 - 43458485
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| | ||||||||||||||    
T  43458146 acacccctaaaaaactaaaaa-catttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatgta-gcctatttatagcc 43458242  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttat 201  Q
    |||||||||| ||| |||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||  |||||||| | | ||||     
T  43458243 taaaacaagtcctatgtcattaatacagtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatggctctgaatctttccgaattttac 43458342  T
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||||  ||||||||||||||||||| |||||||||| ||||| |||||||   ||||||||||||||||| || ||||| |||| | |||||||| || |    
T  43458343 attcttgaatgtccttagccctacatgaagtgccaacttttccctcgttc---accattatcgcattaatccgcaaaatatatttcagaaaacagatgag 43458439  T
Q  302 catttcagattttatattccggaatgcatcagtcatggtctgtggt 347  Q
    |||| | |||||||||||||  |||||||||||||||||| |||||    
T  43458440 cattccggattttatattccataatgcatcagtcatggtcggtggt 43458485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 21 - 338
Target Start/End: Complemental strand, 14816813 - 14816500
Alignment:
Q  21 aaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  14816813 aaacatttgaagaaaaaggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttataggctaaaacaagtcctaggtca 14816715  T
Q  121 ttgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttatattccagaatgtccttagc 220  Q
    || ||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||   ||||||||||| |||| ||||| |||||||||||||    
T  14816714 ttaatacagtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatggctctggatctttctggattttacattccggaatgtccttagc 14816615  T
Q  221 cctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagattttatattc 320  Q
    ||||||  ||||| ||| ||||| |||||||   ||||||||||||||||| |||||||  ||||||| ||||||  ||||  |  ||||||||||||||    
T  14816614 cctacagaaagtgtcaacttttccctcgttc---accattatcgcattaatccgaaaaacatattccgaaaaacaaatgtgtttaccagattttatattc 14816518  T
Q  321 cggaatgcatcagtcatg 338  Q
    || |||| ||||||||||    
T  14816517 cgaaatgtatcagtcatg 14816500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 21 - 338
Target Start/End: Complemental strand, 15263809 - 15263496
Alignment:
Q  21 aaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  15263809 aaacatttgaagaaaaaggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttataggctaaaacaagtcctaggtca 15263711  T
Q  121 ttgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttatattccagaatgtccttagc 220  Q
    || ||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||   ||||||||||| |||| ||||| |||||||||||||    
T  15263710 ttaatacagtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatggctctggatctttctggattttacattccggaatgtccttagc 15263611  T
Q  221 cctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagattttatattc 320  Q
    ||||||  ||||| ||| ||||| |||||||   ||||||||||||||||| |||||||  ||||||| ||||||  ||||  |  ||||||||||||||    
T  15263610 cctacagaaagtgtcaacttttccctcgttc---accattatcgcattaatccgaaaaacatattccgaaaaacaaatgtgtttaccagattttatattc 15263514  T
Q  321 cggaatgcatcagtcatg 338  Q
    || |||| ||||||||||    
T  15263513 cgaaatgtatcagtcatg 15263496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 2 - 337
Target Start/End: Complemental strand, 36312260 - 36311927
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||| |||||| |||||||||||| |||||||||||||||||||| ||  |||| ||||||||||||||||||| ||||| ||||||    
T  36312260 acacccctaaaaaactagaaaacaattgaagaaaatgtaagaaaagaggtgaagtgaacaat-gaagatatttgttgaagatggaagtctatt-atagcc 36312163  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgt---aatcgtccaaatccacaataatggctcataatctttctggagtt 198  Q
    |||||||||| |||||||||| ||||||||||| |||||||||||||||||||   || |||||||| ||||| |||||||||  |||||||| ||| ||    
T  36312162 taaaacaagttctaggtcattaatacagtcaataaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatggctctgaatctttccggattt 36312063  T
Q  199 tatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggt 298  Q
    || ||||| ||| | ||||||||||||| |||||| ||| |||||||||||||||   ||||||||||||||| |||||||| ||||||||||||||| |    
T  36312062 tacattccggaacgcccttagccctacaggaagtgtcaacttttctctcgttcac---cattatcgcattaatccgaaaaatatattccggaaaacagat 36311966  T
Q  299 gtgcatttcagattttatattccggaatgcatcagtcat 337  Q
    ||||||| | |||||||||||||| ||||||||||||||    
T  36311965 gtgcattccggattttatattccgaaatgcatcagtcat 36311927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 35794436 - 35794759
Alignment:
Q  2 acacccctaaataa-ctaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagc 100  Q
    ||||||||||| || |||||||| |||||||||||||| |||||||||| ||| ||||||||  ||||||||||||||||||||||||||||||||||||    
T  35794436 acacccctaaaaaaactaaaaaatatttgaagaaaatgtaagaaaagagctgatgtgaagaat-gaaggtatttgttgaagatggaagcctatttatagc 35794534  T
Q  101 ctaaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagttta 200  Q
    |||||||||||  ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||  |||||||| ||| ||||    
T  35794535 ctaaaacaagtcataggtcattaatacagtcaatgaaaacgtgttagtggttgtaaccgtccaaatccatattaatggctctaaatctttccggatttta 35794634  T
Q  201 tattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgt 300  Q
     |||||  ||||||||||||| ||||||||||||||| ||||| ||||||||| ||||||||||||||||              |||||||||||  |||    
T  35794635 cattccgaaatgtccttagccttacaagaagtgccaacttttccctcgttcaccaccattatcgcattaa--------------tccggaaaacatatgt 35794720  T
Q  301 gcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    ||||| | |||||||||||||||||||||||||||||||    
T  35794721 gcattccggattttatattccggaatgcatcagtcatgg 35794759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 26 - 301
Target Start/End: Complemental strand, 34848030 - 34847753
Alignment:
Q  26 tttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcattgat 125  Q
    ||||||||||||| |||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||| ||    
T  34848030 tttgaagaaaatgtaagaaaagaggtgaagtgaagaat-gaaggtatctgttgaagatggaagcctatttatagcataaaacaagtcctaggtcattaat 34847932  T
Q  126 acagtcaatgaaaacgtgttagtgg---ttgtaatcgtccaaatccacaataatggctcataatctttctggagtttatattccagaatgtccttagccc 222  Q
    |||||||||||||||||||||||||   ||||||  ||||||| ||||| |||||||||  |||||||| ||| |||| ||||| |||||||||||||||    
T  34847931 acagtcaatgaaaacgtgttagtggttgttgtaactgtccaaacccacattaatggctctgaatctttccggattttacattccggaatgtccttagccc 34847832  T
Q  223 tacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    || | |||||||||| ||||| ||||||||| ||||||||||||||||| || ||||| ||||||| ||||||| ||||    
T  34847831 tataggaagtgccaacttttccctcgttcaccaccattatcgcattaatccggaaaatatattccgaaaaacagatgtg 34847753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 150 - 347
Target Start/End: Original strand, 44866155 - 44866352
Alignment:
Q  150 gttgtaatcgtccaaatccacaataatggctcataatctttctggagtttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgt 249  Q
    ||||||| |||||||| |||||||||||||||  |||||||| |||||||| ||||| ||||||||||||||||||| |||||||||||||||| |||||    
T  44866155 gttgtaaccgtccaaacccacaataatggctctgaatctttccggagtttacattccggaatgtccttagccctacaggaagtgccaatttttccctcgt 44866254  T
Q  250 tcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagattttatattccggaatgcatcagtcatggtctgtggt 347  Q
    |||| |||||||||||||||||  | ||||| |||||| ||||||||||||||||| | ||||||| ||||| ||||||||||||||||||| |||||    
T  44866255 tcaccaccattatcgcattaatctggaaaatatattccagaaaacaggtgtgcattccggattttaaattccagaatgcatcagtcatggtcggtggt 44866352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 44862975 - 44863088
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||| ||||| ||||||||||     
T  44862975 acacccctaaaaaactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaa-tgaaggtatttgttcaagattgaagcatatttatagct 44863073  T
Q  102 taaaacaagtactag 116  Q
    |||||||||| ||||    
T  44863074 taaaacaagtcctag 44863088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 42321310 - 42321186
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||| ||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||| ||    
T  42321310 acacctctaaaaaactaaaaa-cattcgaagaaaatggaagaaaagaggtgaagtgaagaat-gaagatatttgttgaagatggaagcctatttataacc 42321213  T
Q  102 taaaacaagtactaggtcattgataca 128  Q
    ||||||||||  ||||| ||| |||||    
T  42321212 taaaacaagtcataggttattaataca 42321186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 49 - 151
Target Start/End: Original strand, 1377355 - 1377456
Alignment:
Q  49 ggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagt 148  Q
    ||||||||||||||  ||||  |||||||||||||||||||||||||||||||||||| ||||  || |||||   ||||||||||||||||||||| ||    
T  1377355 ggtgaagtgaagaat-gaagaaatttgttgaagatggaagcctatttatagcctaaaataagtcatatgtcataagtacagtcaatgaaaacgtgtttgt 1377453  T
Q  149 ggt 151  Q
    |||    
T  1377454 ggt 1377456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 145
Target Start/End: Original strand, 1852136 - 1852250
Alignment:
Q  30 aagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcattgatacag 129  Q
    ||||||||| |||||||||||||||||||||||  |||||  |||||| |||||| |||| ||| |||||||||||||||   |||||||||   ||||     
T  1852136 aagaaaatgtaagaaaagaggtgaagtgaagaat-gaaggactttgttcaagatgcaagcttatatatagcctaaaacaatacctaggtcataagtacaa 1852234  T
Q  130 tcaatgaaaacgtgtt 145  Q
    ||||||||||||||||    
T  1852235 tcaatgaaaacgtgtt 1852250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 3601150 - 3601045
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    |||| |||||| ||||||||||  || |||||||  | |||||||||| ||||||||||||| ||||  |||||||||||||| ||| ||||||||||||    
T  3601150 acactcctaaaaaactaaaaaatgtt-gaagaaatagtaagaaaagagttgaagtgaagaac-gaagaaatttgttgaagatgcaagtctatttatagcc 3601053  T
Q  102 taaaacaa 109  Q
    ||||||||    
T  3601052 taaaacaa 3601045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 26188326 - 26188232
Alignment:
Q  26 tttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcat 121  Q
    ||||||||||||| ||| ||| |||||||||||||||  ||||| |||||||||| ||| | ||||||||||| ||||||||| || |||||||||    
T  26188326 tttgaagaaaatgaaagtaaaaaggtgaagtgaagaat-gaaggaatttgttgaacatgcatgcctatttataacctaaaacatgtcctaggtcat 26188232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 145
Target Start/End: Original strand, 19646909 - 19647046
Alignment:
Q  7 cctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaa 106  Q
    |||||| |||||||||| | ||||| |||||| ||||||||||||||||| |||||  ||||| | |||||||||||  |||| ||||||||| || |||    
T  19646909 cctaaaaaactaaaaaaaaattgaacaaaatgtaagaaaagaggtgaagtaaagaa-tgaaggaaattgttgaagattcaagcatatttatagtcttaaa 19647007  T
Q  107 caagtactaggtcattgatacagtcaatgaaaacgtgtt 145  Q
    | ||| |||| ||||   |||||||||  ||||||||||    
T  19647008 ccagtcctagatcataattacagtcaagtaaaacgtgtt 19647046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 111
Target Start/End: Complemental strand, 31326774 - 31326691
Alignment:
Q  27 ttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 111  Q
    |||||||||| | |||||||||||||||||||||||  ||||  |||||||||||||| || |||||||||||  ||||||||||    
T  31326774 ttgaagaaaaagtaagaaaagaggtgaagtgaagaa-tgaagaaatttgttgaagatgcaaacctatttatagtataaaacaagt 31326691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 108
Target Start/End: Complemental strand, 1906679 - 1906602
Alignment:
Q  30 aagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaaca 108  Q
    ||||||| | |||||||||||||||||||||||  | ||| | |||||||||||  |||||||||||||| || |||||    
T  1906679 aagaaaaagtaagaaaagaggtgaagtgaagaa-tgcaggaacttgttgaagattcaagcctatttatagtcttaaaca 1906602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 10907012 - 10907068
Alignment:
Q  26 tttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagat 83  Q
    ||||||||||||| |||||| ||||||||||||||||  ||||| | |||||||||||    
T  10907012 tttgaagaaaatgtaagaaaggaggtgaagtgaagaa-tgaaggaaattgttgaagat 10907068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 196; Significance: 1e-106; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 2 - 341
Target Start/End: Original strand, 40937176 - 40937514
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||  ||| |||||||||||||||||||||||||||||||||    
T  40937176 acacccctaaaaaactaaaaaacatttgaagaaaatagaagaaaagaggtgaagtgaaaaat-gaaagtatttgttgaagatggaagcctatttatagcc 40937274  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttat 201  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||| | |||  |||||||| | | ||||     
T  40937275 taaaacaaatcctaggtcattaatacagtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaaagactctgaatctttccgaattttac 40937374  T
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||||  ||||||| ||||||||| | |||||||||| ||||| ||||||||| |||||||||||||||||||| ||||| ||||||||||||||| || |    
T  40937375 attctggaatgtctttagccctataggaagtgccaacttttccctcgttcaccaccattatcgcattaattcggaaaatatattccggaaaacagatgcg 40937474  T
Q  302 catttcagattttatattccggaatgcatcagtcatggtc 341  Q
     ||| | |||||||||||||||||||||||||||||||||    
T  40937475 aattccggattttatattccggaatgcatcagtcatggtc 40937514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 149285 - 149621
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||||||||||||||||||||||    
T  149285 acacccctaaaaaactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaatgtaag-tatttgttgaagatggaagcctatttatagcc 149383  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttat 201  Q
    ||||||||||  ||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||  ||||| |||  |||||||| ||| ||||     
T  149384 taaaacaagtcataggtcattaatacagtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacgttaatgactctgaatctttccggattttac 149483  T
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||||| ||||||||||||||||| | |||||||||| ||||| ||||||||| ||||||||||||||||| || ||||| |||| |||||||||  ||||    
T  149484 attccggaatgtccttagccctataggaagtgccaacttttccctcgttcaccaccattatcgcattaatccggaaaatatatttcggaaaacatatgtg 149583  T
Q  302 catttcagattttatattccggaatgcatcagtcatgg 339  Q
      |||| |||||||| |||| |||||||||||||||||    
T  149584 tttttcggattttatgttccagaatgcatcagtcatgg 149621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 2 - 339
Target Start/End: Complemental strand, 36402888 - 36402553
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    |||||| |||| ||||||||| ||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||    
T  36402888 acacccgtaaaaaactaaaaa-catttgaagaaaatgtaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttataacc 36402791  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtgg---ttgtaatcgtccaaatccacaataatggctcataatctttctggagtt 198  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||   |||||| |||||||| ||||| ||||| |||  |||||||| ||| ||    
T  36402790 taaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatgactctgaatctttccggattt 36402691  T
Q  199 tatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggt 298  Q
    || ||||||||| | ||||| ||||||  |||||| ||| ||||||||| |||   |||||||||||||||||||  ||||| ||||||||||||||| |    
T  36402690 tacattccagaacgcccttatccctacgggaagtgtcaacttttctctcattc---accattatcgcattaattcagaaaatatattccggaaaacagat 36402594  T
Q  299 gtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    ||||||| | |||||||||||||||||||||||||||||||    
T  36402593 gtgcattccggattttatattccggaatgcatcagtcatgg 36402553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 47646874 - 47647214
Alignment:
Q  2 acacccctaaataa-ctaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagc 100  Q
    ||||||||||| || ||||||| ||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  47646874 acacccctaaaaaaactaaaaatcatttgaagaaaatgtaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttatagc 47646972  T
Q  101 ctaaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtg---gttgtaatcgtccaaatccacaataatggctcataatctttctggagt 197  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||   ||||||| |||||||| ||||| |||||||||  |||||||| ||| |    
T  47646973 ctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 47647072  T
Q  198 ttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacagg 297  Q
    ||| ||||| |||||||||||||| || | |||||||||| ||||| ||||||||| ||||||||||||||||| || ||||| ||||||| |||| ||     
T  47647073 ttacattccggaatgtccttagccttataggaagtgccaacttttccctcgttcaccaccattatcgcattaatccggaaaatatattccgaaaaataga 47647172  T
Q  298 tgtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    ||||  |  | |||| |||||| |||||||||||||| ||||    
T  47647173 tgtgtttaccggattatatatttcggaatgcatcagttatgg 47647214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 2 - 339
Target Start/End: Complemental strand, 26502370 - 26502032
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||| |    
T  26502370 acacccctaaaaaactaaaaaacatttgaagaaaatgcaagaaaagaggtgaagtgaagaat-gtaggtatttgttgaagatggaagcctatttatagtc 26502272  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtgg---ttgtaatcgtccaaatccacaataatggctcataatctttctggagtt 198  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||   ||||||  ||||||| ||||| |||||||||  |||||||| ||| ||    
T  26502271 taaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgttgtaactgtccaaacccacattaatggctctgaatctttccggattt 26502172  T
Q  199 tatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggt 298  Q
    || ||||||||||||||||||||||| | |||||| |||  |||| ||| ||||| |||||||||||||||||| | ||||| ||||||||||||||  |    
T  26502171 tacattccagaatgtccttagccctataggaagtgacaa-ctttccctcattcaccaccattatcgcattaatttgcaaaatatattccggaaaacaaat 26502073  T
Q  299 gtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||  || | | || ||||||||||||||||||| ||||||    
T  26502072 gtgatttccgggttatatattccggaatgcatcaatcatgg 26502032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 14 - 338
Target Start/End: Complemental strand, 10509388 - 10509062
Alignment:
Q  14 aactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtac 113  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||| |||| |    
T  10509388 aactaaaaaacatttgaagaaaatgtaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatagaagcctatttatagcctaaaagaagtcc 10509290  T
Q  114 taggtcattgatacagtcaatgaaaacgtgttagtggttgt---aatcgtccaaatccacaataatggctcataatctttctggagtttatattccagaa 210  Q
    ||||||||| |||||||||||||||||||||||||||||||   || |||||||| ||||| |||||||||  |||||||| ||| |||| ||||| |||    
T  10509289 taggtcattaatacagtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatggctctgaatctttccggattttacattccggaa 10509190  T
Q  211 tgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcaga 310  Q
    |||||||||||||| | |||||| |||  |||| ||||||||  ||||||||||||||||| || ||||| ||||| ||||||||| ||||| || | ||    
T  10509189 tgtccttagccctataggaagtgacaacctttccctcgttcaacaccattatcgcattaatccggaaaatatattcaggaaaacagatgtgctttccgga 10509090  T
Q  311 ttttatattccggaatgcatcagtcatg 338  Q
    || ||||||| ||||||||||| |||||    
T  10509089 ttatatattctggaatgcatcattcatg 10509062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 2 - 271
Target Start/End: Complemental strand, 47013895 - 47013626
Alignment:
Q  2 acacccctaaataactaaaaaa-catttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagc 100  Q
    ||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||    
T  47013895 acacccctaaaaaactaaaaaaacatttgaagaaaatgtaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaaacctatttatagc 47013797  T
Q  101 ctaaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagttta 200  Q
    ||||||||||| |||||||||| |||| |||||||||||||||||||||||||||| | |||||| ||||| |||||||||  |||||||  |||  |||    
T  47013796 ctaaaacaagtcctaggtcattaatacggtcaatgaaaacgtgttagtggttgtaaccatccaaacccacattaatggctctgaatcttttcggatctta 47013697  T
Q  201 tattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaat 271  Q
     ||||| ||||||||||||||||| | |||||||||| ||||||||||||||| |||||||||||||||||    
T  47013696 cattccggaatgtccttagccctataggaagtgccaacttttctctcgttcactaccattatcgcattaat 47013626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 39586532 - 39586864
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| |||||||||||||||||| |||||| ||||||| ||||||| |||||||  ||| |||||||||||| |||||||||||||||||||     
T  39586532 acacccctaaaaaactaaaaaacatttgaataaaatgtaagaaaataggtgaattgaagaat-gaaagtatttgttgaaaatggaagcctatttatagct 39586630  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttctggagtttat 201  Q
    |||||||| | |||||||||| ||||||||||||||| ||||||||||||||||| | |||||| ||||| |||||||||  |||||||| ||| ||||     
T  39586631 taaaacaaatcctaggtcattaatacagtcaatgaaaccgtgttagtggttgtaaccatccaaacccacattaatggctctgaatctttccggattttac 39586730  T
Q  202 attccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtg 301  Q
    ||||| |||||||||||| |||||| ||||||| || ||||| |||||||   |||||||||||||||||  | ||||| ||||||| ||||||| ||||    
T  39586731 attccggaatgtccttagtcctacaggaagtgctaacttttccctcgttc---accattatcgcattaatcaggaaaatatattccgaaaaacagatgtg 39586827  T
Q  302 catttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||| | ||||||| |||| ||||||||||||||||||    
T  39586828 cattccggatttta-attctggaatgcatcagtcatgg 39586864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 2 - 181
Target Start/End: Original strand, 227588 - 227766
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||| ||||||||||||    
T  227588 acacccctaaaaaactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaat-gaaggtatttgttaaagatggaagtctatttatagcc 227686  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctc 181  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||  ||||||||    
T  227687 taaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacatcaatggctc 227766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 2 - 181
Target Start/End: Original strand, 32529759 - 32529936
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  32529759 acacccctaaaaaactaaaaa-catttgaagaaaagggaagaaaagaggtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttatagcc 32529856  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctc 181  Q
    |||||||||| |||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||| |||||||||    
T  32529857 taaaacaagtcctaggtcattaatacagttaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatggctc 32529936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 39353257 - 39353430
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||  ||| |||| ||||||||||||||||||||||||||||    
T  39353257 acacccctaaaaaactaaaaa-catttgaagaaaatggaagaaaagaggcgaagtgaagaat-gaatgtatctgttgaagatggaagcctatttatagcc 39353354  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatg 177  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| |||||    
T  39353355 taaaacaaatcctaggtcattaatacagtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatg 39353430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 2 - 181
Target Start/End: Complemental strand, 41193895 - 41193718
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| ||||||||  ||||| |||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| |||||||||||    
T  41193895 acacccctaaaaaactaaaag-catttaaagaaaatggaagaaaagaggtgaagtggagaat-gaaggtatttgttgaagatggaagcatatttatagcc 41193798  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctc 181  Q
    |||||||||| ||||||||||  |||||||||||||||||||||||||||||||| |||||||| ||||| |||| ||||    
T  41193797 taaaacaagtcctaggtcattactacagtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatagctc 41193718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 2 - 181
Target Start/End: Original strand, 6936427 - 6936604
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcc 101  Q
    ||||||||||| |||| |||| ||||||||||||||| ||||||| |||||||||||||||  ||| |||||||||||||||||||||||||||||||||    
T  6936427 acacccctaaaaaactgaaaa-catttgaagaaaatgaaagaaaaaaggtgaagtgaagaat-gaatgtatttgttgaagatggaagcctatttatagcc 6936524  T
Q  102 taaaacaagtactaggtcattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctc 181  Q
    |||||||||| ||| |||||| ||||||||||||||||||||||||||||||||| || ||||| ||| | |||||||||    
T  6936525 taaaacaagtcctaagtcattaatacagtcaatgaaaacgtgttagtggttgtaaccgcccaaacccatattaatggctc 6936604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 41174772 - 41174913
Alignment:
Q  6 ccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaa 105  Q
    ||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  41174772 ccctaaaaaactaaaaaacatttgaagaaaatgtaagaaaagatgtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttatagcctaaa 41174870  T
Q  106 acaagtactaggtcattgatacagtcaatgaaaacgtgttagt 148  Q
    |||||| ||| |||||| |||||||||||||||||||||||||    
T  41174871 acaagtcctatgtcattaatacagtcaatgaaaacgtgttagt 41174913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 49166271 - 49166130
Alignment:
Q  19 aaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggt 118  Q
    ||||||||||||| |||||||||||||||| |||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||| |||| |    
T  49166271 aaaaacatttgaacaaaatggaagaaaagatgtgaagtgaagaat-gaaggtatttgt-gaagatggaagcctatttatagcctaaaacaagtcctagat 49166174  T
Q  119 cattgatacagtcaatgaaaacgtgttagtggttgtaatcgtcc 162  Q
    ||||  |||||||||||||||| ||||||||||||||| |||||    
T  49166173 cattactacagtcaatgaaaacatgttagtggttgtaaccgtcc 49166130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 150 - 339
Target Start/End: Original strand, 41182006 - 41182195
Alignment:
Q  150 gttgtaatcgtccaaatccacaataatggctcataatctttctggagtttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgt 249  Q
    ||||||| | |||||| ||||| |||||||||  |||||||| ||| |||| ||||  ||||||| ||||||||| | |||||||||| ||||| |||||    
T  41182006 gttgtaaccatccaaacccacattaatggctctgaatctttccggactttacattctggaatgtctttagccctataggaagtgccaacttttccctcgt 41182105  T
Q  250 tcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagattttatattccggaatgcatcagtcatgg 339  Q
    |||| |||||||||||||||||  ||||||| ||||||||||||||| ||||| ||   |||| ||||||||||||||||||||||||||    
T  41182106 tcaccaccattatcgcattaatctgaaaaatatattccggaaaacagatgtgctttctggattatatattccggaatgcatcagtcatgg 41182195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 26 - 165
Target Start/End: Complemental strand, 31765357 - 31765219
Alignment:
Q  26 tttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcattgat 125  Q
    ||||||||| ||||||||||  |||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||  |    
T  31765357 tttgaagaagatggaagaaagaaggtgaagtgaagaat-gaaggtatttgttgaagatggaagcctatttataacctaaaacaagtcctaggtcattagt 31765259  T
Q  126 acagtcaatgaaaacgtgttagtggttgtaatcgtccaaa 165  Q
     |||||||| ||||||||||||||||||||| ||| ||||    
T  31765258 gcagtcaataaaaacgtgttagtggttgtaaccgttcaaa 31765219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 33843491 - 33843623
Alignment:
Q  18 aaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactagg 117  Q
    |||||| |||||||||||||| || ||||||||||||||||||||  ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||     
T  33843491 aaaaaaaatttgaagaaaatgtaaaaaaagaggtgaagtgaagaat-gaaggaatttgttgaagatggaaacctatttatagcctaaaacaagtcctaga 33843589  T
Q  118 tcattgatacagtcaatgaaaacgtgttagtggt 151  Q
    ||||    ||||||||  |||||||||| |||||    
T  33843590 tcataaccacagtcaaataaaacgtgtttgtggt 33843623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 213 - 330
Target Start/End: Complemental strand, 49166058 - 49165944
Alignment:
Q  213 tccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagatt 312  Q
    |||||| |||||||||||||||||| ||||| |||||||||   ||||||||||||||| || ||||| |||| |||||||||| |||||||| |  |||    
T  49166058 tccttaaccctacaagaagtgccaacttttccctcgttcac---cattatcgcattaatccggaaaatatatttcggaaaacagatgtgcattccgaatt 49165962  T
Q  313 ttatattccggaatgcat 330  Q
    |||||||||||| |||||    
T  49165961 ttatattccggagtgcat 49165944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 42899201 - 42899284
Alignment:
Q  27 ttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 111  Q
    |||||||||||| ||||||| |||||||||||||||  ||||| |||||||||| ||| ||||||||||||||||||||||||||    
T  42899201 ttgaagaaaatgtaagaaaaaaggtgaagtgaagaat-gaaggaatttgttgaaaatgcaagcctatttatagcctaaaacaagt 42899284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 51329079 - 51328989
Alignment:
Q  30 aagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcat 121  Q
    ||||||||| || ||||||||||||||||||||  ||||| |||||||||| ||| |||||||||||||||||||||||||| |||| ||||    
T  51329079 aagaaaatgtaataaaagaggtgaagtgaagaat-gaaggaatttgttgaacatgcaagcctatttatagcctaaaacaagtcctagttcat 51328989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 53393928 - 53394012
Alignment:
Q  26 tttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 111  Q
    ||||||||||||| |||||||||| | ||||||||||  ||||| |||||||||| ||| ||||||||||||||||||||||||||    
T  53393928 tttgaagaaaatgaaagaaaagagataaagtgaagaat-gaaggaatttgttgaacatgcaagcctatttatagcctaaaacaagt 53394012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 302
Target Start/End: Original strand, 6936640 - 6936742
Alignment:
Q  197 tttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacag 296  Q
    |||| ||||| ||| ||||||||||||||||||||| |||| ||||| |||||||   ||| ||||||||||||| || ||||| | || ||||||||||    
T  6936640 tttacattccggaacgtccttagccctacaagaagtaccaacttttccctcgttc---acctttatcgcattaatccggaaaatatgtttcggaaaacag 6936736  T
Q  297 gtgtgc 302  Q
     |||||    
T  6936737 atgtgc 6936742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 25214685 - 25214595
Alignment:
Q  30 aagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcat 121  Q
    ||||||| | |||||||| |||||| |||||||  ||||| ||||||| |||||| ||| |||||||||||||||||||||| |||| ||||    
T  25214685 aagaaaaagtaagaaaagtggtgaattgaagaat-gaaggaatttgttaaagatgtaagtctatttatagcctaaaacaagtcctagatcat 25214595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 279
Target Start/End: Original strand, 53814818 - 53814910
Alignment:
Q  184 aatctttctggagtttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaa 279  Q
    ||||||||  || |||| ||||| ||| |||||||||||| || |||||||||| ||||| |||||||   ||||||||||||||||| |||||||    
T  53814818 aatctttccagattttacattccggaacgtccttagccctgcaggaagtgccaacttttccctcgttc---accattatcgcattaatccgaaaaa 53814910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 10494895 - 10494800
Alignment:
Q  2 acacccctaaataactaaaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatag 99  Q
    |||| |||||| ||||||| | || |||||||||||| ||||||| |||||||||||||||  ||||| | |||||||||||  |||| |||||||||    
T  10494895 acactcctaaaaaactaaata-caattgaagaaaatgtaagaaaaaaggtgaagtgaagaa-tgaaggaaattgttgaagatctaagcatatttatag 10494800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 334
Target Start/End: Complemental strand, 31765144 - 31765034
Alignment:
Q  221 cctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaacaggtgtgcatttcagattttatattc 320  Q
    ||||||||||||||||| ||||| |||||||   |||| ||||| |||||| || ||||| |||| |||||||||   || |||| | |||| ||| |||    
T  31765144 cctacaagaagtgccaacttttccctcgttc---accagtatcgtattaatccgcaaaatatatttcggaaaacaaaggtacattccggattgtattttc 31765048  T
Q  321 cggaatgcatcagt 334  Q
    |||| |||||||||    
T  31765047 cggactgcatcagt 31765034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 39353462 - 39353527
Alignment:
Q  188 tttctggagtttatattccagaatgtccttagccctacaagaagtgccaatttttctctcgttcac 253  Q
    |||| ||| |||| ||||| || |||||||||| |||||||||||||||| ||||| |||| ||||    
T  39353462 tttccggattttacattccggagtgtccttagctctacaagaagtgccaacttttccctcgctcac 39353527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 12717635 - 12717690
Alignment:
Q  27 ttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagat 83  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| | |||||||||||    
T  12717635 ttgaagtaaatgtaagaaaagaggtgaagtgaagaa-tgaaggaaattgttgaagat 12717690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 27023918 - 27023961
Alignment:
Q  40 aagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatg 84  Q
    |||||||||||||||||||||||  ||||| ||||||||||||||    
T  27023918 aagaaaagaggtgaagtgaagaa-tgaaggaatttgttgaagatg 27023961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1301 (Bit Score: 89; Significance: 8e-43; HSPs: 2)
Name: scaffold1301
Description:

Target: scaffold1301; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 19 - 191
Target Start/End: Original strand, 1631 - 1802
Alignment:
Q  19 aaaaacatttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggt 118  Q
    |||||||||||||||||||||| ||||| ||||||| |||||||  ||||||||||||||||| ||||||||||||||||| ||||||||||   || ||    
T  1631 aaaaacatttgaagaaaatggaggaaaataggtgaactgaagaat-gaaggtatttgttgaagttggaagcctatttatagtctaaaacaagccttaagt 1729  T
Q  119 cattgatacagtcaatgaaaacgtgttagtggttgtaatcgtccaaatccacaataatggctcataatctttc 191  Q
    |||| |||||||||| ||||||  |||||||||||||| |||||||| ||||| |||||||||  ||||||||    
T  1730 cattaatacagtcaacgaaaacaagttagtggttgtaaccgtccaaacccacattaatggctctgaatctttc 1802  T

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Target: scaffold1301; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 338
Target Start/End: Original strand, 1867 - 1903
Alignment:
Q  302 catttcagattttatattccggaatgcatcagtcatg 338  Q
    |||||| |||||||| |||||||||||||||||||||    
T  1867 catttcggattttattttccggaatgcatcagtcatg 1903  T

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Target: scaffold0054 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 137
Target Start/End: Complemental strand, 19176 - 19067
Alignment:
Q  27 ttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcattgata 126  Q
    |||||||||||| |||||||||| ||||||||||||  ||||| ||||||||||||||  |||||||||||||||||||||||||  ||||||||   ||    
T  19176 ttgaagaaaatgtaagaaaagagttgaagtgaagaat-gaaggaatttgttgaagatgagagcctatttatagcctaaaacaagtcttaggtcataagta 19078  T
Q  127 cagtcaatgaa 137  Q
    |||||||||||    
T  19077 cagtcaatgaa 19067  T

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Target: scaffold0160 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 17394 - 17301
Alignment:
Q  27 ttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcat 121  Q
    |||||||||| | ||||||| |||||||||||||||  ||| | |||||||||||||  || ||||||||||||||||||||||| |||| ||||    
T  17394 ttgaagaaaaagtaagaaaataggtgaagtgaagaat-gaaagaatttgttgaagatacaaacctatttatagcctaaaacaagtcctagatcat 17301  T

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Target: scaffold0048 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 121
Target Start/End: Original strand, 51825 - 51916
Alignment:
Q  27 ttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcat 121  Q
    |||||||||| | ||||||||||||||||| |||||  ||||| |  ||||||||||| || ||||||||||||||||||||||| |||| ||||    
T  51825 ttgaagaaaaagtaagaaaagaggtgaagttaagaa-tgaaggaa--tgttgaagatgcaaacctatttatagcctaaaacaagtcctagatcat 51916  T

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Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 427321 - 427263
Alignment:
Q  43 aaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcct 102  Q
    ||||||||||||||||||||  ||||| | |||||||||||| |||||||||||||||||    
T  427321 aaaagaggtgaagtgaagaat-gaaggaaattgttgaagatgcaagcctatttatagcct 427263  T

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Target: scaffold0210 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 8264 - 8171
Alignment:
Q  27 ttgaagaaaatggaagaaaagaggtgaagtgaagaacagaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactaggtcat 121  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| | ||||| |||||  ||||||| ||||||||| |||| ||| |||| ||||    
T  8264 ttgaagtaaatgtaagaaaagaggtgaagtgaagaa-tgaaggaaattgttaaagatccaagcctagttatagccttaaaccagtcctagatcat 8171  T

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Target: scaffold0121 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 295
Target Start/End: Complemental strand, 47409 - 47321
Alignment:
Q  204 tccagaatgtccttagccctacaagaagtgccaatttttctctcgttcacaaccattatcgcattaattcgaaaaatctattccggaaaaca 295  Q
    |||||||  |||||| ||||||||||||| |||| ||||| |||||||   |||| ||||  |||||| || ||||| ||||||||||||||    
T  47409 tccagaacttccttaaccctacaagaagtaccaacttttccctcgttc---accagtatcatattaatccggaaaatatattccggaaaaca 47321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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