View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21670_high_14 (Length: 305)

Name: NF21670_high_14
Description: NF21670
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21670_high_14
NF21670_high_14
[»] scaffold0061 (2 HSPs)
scaffold0061 (197-305)||(68480-68590)
scaffold0061 (8-64)||(68326-68383)
[»] chr8 (35 HSPs)
chr8 (197-305)||(21974108-21974218)
chr8 (197-305)||(21978218-21978328)
chr8 (197-305)||(43250246-43250356)
chr8 (197-305)||(21386203-21386311)
chr8 (197-271)||(21829396-21829472)
chr8 (197-271)||(22110668-22110744)
chr8 (231-305)||(23427870-23427944)
chr8 (231-305)||(23913309-23913383)
chr8 (231-305)||(44385794-44385868)
chr8 (233-305)||(14399053-14399127)
chr8 (233-305)||(21409945-21410019)
chr8 (233-305)||(21804437-21804511)
chr8 (22-85)||(1323713-1323776)
chr8 (46-93)||(15924282-15924329)
chr8 (23-91)||(20983505-20983573)
chr8 (26-92)||(20983541-20983607)
chr8 (22-85)||(13428678-13428741)
chr8 (31-90)||(20983480-20983539)
chr8 (22-85)||(38550621-38550684)
chr8 (22-85)||(38550686-38550749)
chr8 (23-93)||(1323747-1323816)
chr8 (28-93)||(17461655-17461721)
chr8 (28-93)||(22238598-22238664)
chr8 (23-93)||(38550655-38550724)
chr8 (23-85)||(38550720-38550781)
chr8 (8-64)||(21829137-21829194)
chr8 (23-64)||(21973736-21973777)
chr8 (23-64)||(21977846-21977887)
chr8 (23-64)||(22110921-22110962)
chr8 (23-64)||(43250681-43250722)
chr8 (23-59)||(20046715-20046751)
chr8 (61-93)||(21977799-21977831)
chr8 (61-93)||(22110958-22110990)
chr8 (231-274)||(37515104-37515148)
chr8 (61-93)||(43250718-43250750)
[»] chr7 (103 HSPs)
chr7 (197-305)||(31769-31879)
chr7 (197-305)||(12706047-12706157)
chr7 (197-305)||(12713584-12713694)
chr7 (197-305)||(12717331-12717441)
chr7 (197-305)||(16908434-16908544)
chr7 (197-305)||(12722242-12722352)
chr7 (197-305)||(18278038-18278148)
chr7 (197-305)||(18282002-18282112)
chr7 (197-271)||(72307-72383)
chr7 (197-271)||(76416-76492)
chr7 (231-305)||(20486786-20486860)
chr7 (233-305)||(2531293-2531367)
chr7 (215-305)||(9752452-9752542)
chr7 (231-305)||(10607281-10607355)
chr7 (215-305)||(18301395-18301485)
chr7 (10-64)||(18424374-18424428)
chr7 (220-305)||(26291201-26291284)
chr7 (233-305)||(2833442-2833516)
chr7 (233-305)||(15083270-15083344)
chr7 (46-93)||(18424728-18424775)
chr7 (231-305)||(25928331-25928406)
chr7 (201-305)||(1859953-1860056)
chr7 (23-93)||(2833162-2833231)
chr7 (231-305)||(16582465-16582539)
chr7 (23-92)||(25928183-25928252)
chr7 (46-93)||(18424615-18424662)
chr7 (23-93)||(6170747-6170817)
chr7 (23-93)||(9390364-9390434)
chr7 (23-93)||(16582687-16582757)
chr7 (8-93)||(18278318-18278403)
chr7 (8-93)||(18282281-18282366)
chr7 (231-305)||(13919372-13919447)
chr7 (46-93)||(26291396-26291443)
chr7 (233-305)||(39721240-39721314)
chr7 (23-93)||(6170780-6170850)
chr7 (23-93)||(16582753-16582823)
chr7 (23-92)||(20486903-20486971)
chr7 (233-305)||(7520176-7520250)
chr7 (22-85)||(14270735-14270798)
chr7 (22-85)||(17231856-17231919)
chr7 (22-85)||(17231921-17231984)
chr7 (22-85)||(17231986-17232049)
chr7 (23-62)||(18301528-18301567)
chr7 (51-93)||(2531040-2531082)
chr7 (23-93)||(6170813-6170883)
chr7 (23-93)||(14270704-14270773)
chr7 (23-85)||(16582662-16582724)
chr7 (23-93)||(17231881-17231950)
chr7 (23-93)||(17231946-17232015)
chr7 (23-93)||(17232011-17232080)
chr7 (23-85)||(26291338-26291400)
chr7 (23-64)||(18278249-18278290)
chr7 (23-64)||(18282212-18282253)
chr7 (25-85)||(8467861-8467921)
chr7 (37-93)||(18278286-18278341)
chr7 (37-93)||(18282249-18282304)
chr7 (22-85)||(8467926-8467989)
chr7 (23-62)||(9390397-9390436)
chr7 (23-58)||(10607161-10607196)
chr7 (22-85)||(14270670-14270733)
chr7 (22-85)||(17232051-17232114)
chr7 (258-305)||(39268301-39268348)
chr7 (51-93)||(2833157-2833199)
chr7 (23-93)||(2833195-2833264)
chr7 (43-85)||(9390351-9390393)
chr7 (23-93)||(9752340-9752410)
chr7 (37-91)||(10607142-10607196)
chr7 (29-82)||(12556440-12556494)
chr7 (28-82)||(15112352-15112406)
chr7 (28-82)||(15115924-15115978)
chr7 (23-93)||(16582720-16582790)
chr7 (28-93)||(16998075-16998141)
chr7 (23-85)||(17231824-17231885)
chr7 (51-93)||(20486934-20486976)
chr7 (51-93)||(25928178-25928220)
chr7 (28-93)||(46581191-46581257)
chr7 (23-64)||(31979-32020)
chr7 (8-64)||(71968-72025)
chr7 (8-64)||(76077-76134)
chr7 (23-64)||(2531078-2531119)
chr7 (23-64)||(2833227-2833268)
chr7 (28-92)||(8939674-8939739)
chr7 (44-92)||(8939708-8939757)
chr7 (8-64)||(12705813-12705870)
chr7 (23-64)||(12713794-12713835)
chr7 (23-64)||(12717618-12717659)
chr7 (23-64)||(12722529-12722570)
chr7 (23-92)||(16582623-16582691)
chr7 (61-93)||(32016-32048)
chr7 (261-305)||(11660326-11660370)
chr7 (61-93)||(12713831-12713863)
chr7 (61-93)||(12717655-12717687)
chr7 (61-93)||(12722566-12722598)
chr7 (261-305)||(13891674-13891718)
chr7 (30-93)||(14272881-14272945)
chr7 (261-305)||(14420831-14420875)
chr7 (261-305)||(16005048-16005092)
chr7 (23-59)||(18423277-18423313)
chr7 (23-59)||(18424583-18424619)
chr7 (261-305)||(18606382-18606426)
chr7 (23-59)||(18639834-18639870)
chr7 (261-305)||(18871341-18871385)
chr7 (23-55)||(26291335-26291367)
[»] chr6 (58 HSPs)
chr6 (197-305)||(8242456-8242566)
chr6 (197-305)||(11565445-11565555)
chr6 (197-305)||(12620258-12620368)
chr6 (197-305)||(22861799-22861909)
chr6 (197-305)||(23988347-23988457)
chr6 (199-305)||(14470925-14471028)
chr6 (197-278)||(1643323-1643404)
chr6 (197-271)||(16758782-16758858)
chr6 (198-305)||(18918511-18918615)
chr6 (197-271)||(22947734-22947810)
chr6 (197-271)||(22951690-22951766)
chr6 (197-271)||(23870178-23870254)
chr6 (197-271)||(23874134-23874210)
chr6 (10-91)||(31479348-31479428)
chr6 (231-303)||(2076332-2076404)
chr6 (220-305)||(23400722-23400805)
chr6 (231-305)||(11716899-11716975)
chr6 (252-305)||(27555583-27555636)
chr6 (46-93)||(16623168-16623215)
chr6 (46-93)||(18918401-18918448)
chr6 (23-93)||(22075066-22075136)
chr6 (10-59)||(16622933-16622982)
chr6 (221-305)||(18953436-18953518)
chr6 (46-93)||(1643574-1643621)
chr6 (28-93)||(2200814-2200880)
chr6 (10-64)||(14471243-14471298)
chr6 (28-93)||(15874889-15874955)
chr6 (233-305)||(22075347-22075425)
chr6 (23-64)||(22075132-22075173)
chr6 (215-276)||(14981182-14981244)
chr6 (23-85)||(18913300-18913361)
chr6 (51-93)||(22075061-22075103)
chr6 (28-85)||(22420596-22420654)
chr6 (51-92)||(2076483-2076524)
chr6 (51-92)||(2076599-2076640)
chr6 (23-64)||(8242744-8242785)
chr6 (23-64)||(11565732-11565773)
chr6 (23-64)||(12620037-12620078)
chr6 (8-64)||(16759140-16759197)
chr6 (44-85)||(18913332-18913373)
chr6 (23-64)||(18953244-18953285)
chr6 (25-62)||(18953356-18953393)
chr6 (23-64)||(22947987-22948028)
chr6 (23-64)||(22951943-22951984)
chr6 (23-64)||(23870431-23870472)
chr6 (23-64)||(23874387-23874428)
chr6 (23-64)||(23988830-23988871)
chr6 (28-80)||(28104480-28104533)
chr6 (61-93)||(8242781-8242813)
chr6 (61-93)||(11565769-11565801)
chr6 (61-93)||(12620009-12620041)
chr6 (23-59)||(16623136-16623172)
chr6 (61-93)||(22948024-22948056)
chr6 (61-93)||(22951980-22952012)
chr6 (61-93)||(23870468-23870500)
chr6 (61-93)||(23874424-23874456)
chr6 (61-93)||(23988867-23988899)
chr6 (261-305)||(27222876-27222920)
[»] chr5 (45 HSPs)
chr5 (197-305)||(20294558-20294668)
chr5 (199-305)||(19474099-19474207)
chr5 (197-305)||(15238044-15238152)
chr5 (197-305)||(40727326-40727434)
chr5 (215-305)||(20912197-20912287)
chr5 (23-93)||(22108152-22108222)
chr5 (10-82)||(10751939-10752010)
chr5 (231-305)||(22108410-22108484)
chr5 (231-305)||(22120552-22120626)
chr5 (233-305)||(18354841-18354915)
chr5 (46-92)||(15237742-15237788)
chr5 (23-93)||(18355077-18355146)
chr5 (23-93)||(22120297-22120367)
chr5 (252-304)||(24768544-24768596)
chr5 (23-93)||(5889804-5889874)
chr5 (46-92)||(15237855-15237901)
chr5 (23-81)||(20912118-20912176)
chr5 (23-92)||(22108185-22108254)
chr5 (23-92)||(22120330-22120399)
chr5 (23-93)||(5889837-5889910)
chr5 (214-276)||(22120499-22120562)
chr5 (28-93)||(35852282-35852348)
chr5 (23-64)||(5889873-5889914)
chr5 (23-64)||(18355040-18355081)
chr5 (23-64)||(24768264-24768305)
chr5 (23-62)||(18355143-18355182)
chr5 (23-93)||(21742240-21742311)
chr5 (8-62)||(40727067-40727122)
chr5 (28-82)||(41862112-41862167)
chr5 (28-93)||(30139048-30139114)
chr5 (10-62)||(18355179-18355232)
chr5 (23-64)||(19473879-19473920)
chr5 (23-64)||(20294771-20294812)
chr5 (212-272)||(22108355-22108416)
chr5 (61-93)||(19473851-19473883)
chr5 (261-305)||(19510506-19510550)
chr5 (61-93)||(20294808-20294840)
chr5 (261-305)||(22339056-22339100)
chr5 (261-305)||(23113393-23113437)
chr5 (46-93)||(24211985-24212033)
chr5 (261-305)||(28372072-28372116)
chr5 (261-305)||(37599999-37600043)
chr5 (261-305)||(38146409-38146453)
chr5 (23-59)||(39244704-39244740)
chr5 (261-305)||(41878642-41878686)
[»] chr4 (63 HSPs)
chr4 (197-305)||(9555113-9555223)
chr4 (197-305)||(14758916-14759026)
chr4 (197-305)||(14955684-14955794)
chr4 (197-305)||(17807098-17807208)
chr4 (197-305)||(4562698-4562808)
chr4 (197-305)||(5758380-5758490)
chr4 (197-305)||(25688486-25688596)
chr4 (197-305)||(33740880-33740990)
chr4 (197-305)||(12486315-12486422)
chr4 (198-305)||(27532796-27532900)
chr4 (215-305)||(23996911-23997001)
chr4 (215-305)||(631692-631782)
chr4 (231-305)||(12422987-12423061)
chr4 (231-305)||(17052406-17052480)
chr4 (215-305)||(22634871-22634961)
chr4 (10-64)||(15223685-15223739)
chr4 (46-93)||(15223926-15223973)
chr4 (233-305)||(20158408-20158482)
chr4 (23-93)||(15189726-15189796)
chr4 (23-93)||(15189759-15189829)
chr4 (233-305)||(20161084-20161158)
chr4 (233-305)||(20163859-20163933)
chr4 (28-93)||(17994952-17995018)
chr4 (46-93)||(27532963-27533010)
chr4 (23-81)||(12423189-12423247)
chr4 (23-81)||(17048969-17049027)
chr4 (28-93)||(631582-631647)
chr4 (233-305)||(10711869-10711943)
chr4 (233-305)||(10925639-10925713)
chr4 (22-85)||(15481979-15482042)
chr4 (22-85)||(19857004-19857067)
chr4 (28-93)||(15876871-15876937)
chr4 (23-59)||(23996777-23996813)
chr4 (22-85)||(361546-361609)
chr4 (23-62)||(631610-631649)
chr4 (258-305)||(13813820-13813867)
chr4 (258-305)||(13818308-13818355)
chr4 (22-85)||(15481914-15481977)
chr4 (8-93)||(5757956-5758042)
chr4 (23-93)||(15481948-15482017)
chr4 (23-85)||(15482013-15482074)
chr4 (28-93)||(15876837-15876903)
chr4 (23-81)||(22634792-22634850)
chr4 (23-64)||(4562480-4562521)
chr4 (23-64)||(5758005-5758046)
chr4 (23-64)||(9555400-9555441)
chr4 (23-64)||(14758621-14758662)
chr4 (23-64)||(14955386-14955427)
chr4 (44-92)||(21102945-21102994)
chr4 (23-64)||(25688773-25688814)
chr4 (23-64)||(33741170-33741211)
chr4 (61-93)||(4562452-4562484)
chr4 (23-59)||(7641721-7641757)
chr4 (61-93)||(9555437-9555469)
chr4 (61-93)||(14758593-14758625)
chr4 (61-93)||(14955358-14955390)
chr4 (23-59)||(15355861-15355897)
chr4 (261-305)||(15533263-15533307)
chr4 (261-305)||(18211648-18211692)
chr4 (261-305)||(24048375-24048419)
chr4 (61-93)||(25688810-25688842)
chr4 (61-93)||(33741207-33741239)
chr4 (261-305)||(49549073-49549117)
[»] chr3 (107 HSPs)
chr3 (197-305)||(7108282-7108392)
chr3 (197-305)||(7112217-7112327)
chr3 (197-305)||(11068657-11068767)
chr3 (197-305)||(22320173-22320283)
chr3 (197-305)||(22335228-22335338)
chr3 (197-305)||(55021420-55021530)
chr3 (197-305)||(11167018-11167128)
chr3 (197-305)||(14497991-14498101)
chr3 (197-305)||(28948505-28948615)
chr3 (199-305)||(15616221-15616329)
chr3 (197-305)||(30064429-30064540)
chr3 (197-305)||(4590087-4590195)
chr3 (197-271)||(4112573-4112649)
chr3 (215-305)||(17318454-17318544)
chr3 (197-271)||(4108724-4108800)
chr3 (197-273)||(8490318-8490394)
chr3 (212-303)||(14068004-14068095)
chr3 (231-305)||(16795547-16795621)
chr3 (10-64)||(16751788-16751842)
chr3 (232-305)||(12853325-12853398)
chr3 (244-305)||(18933329-18933390)
chr3 (10-93)||(14067674-14067758)
chr3 (233-305)||(5219891-5219965)
chr3 (233-305)||(11853750-11853824)
chr3 (46-93)||(16751555-16751602)
chr3 (46-93)||(19774562-19774609)
chr3 (233-305)||(37440641-37440715)
chr3 (201-305)||(15463922-15464025)
chr3 (23-93)||(18440570-18440640)
chr3 (23-93)||(19485644-19485714)
chr3 (10-91)||(19774311-19774391)
chr3 (233-305)||(11301626-11301700)
chr3 (233-305)||(14664469-14664543)
chr3 (233-305)||(14667633-14667707)
chr3 (231-305)||(14670070-14670141)
chr3 (46-93)||(4589868-4589915)
chr3 (30-93)||(49390322-49390385)
chr3 (23-93)||(12338841-12338911)
chr3 (23-85)||(18440492-18440554)
chr3 (23-85)||(19485566-19485628)
chr3 (23-64)||(12853062-12853103)
chr3 (23-62)||(8490215-8490254)
chr3 (26-81)||(16795684-16795739)
chr3 (47-93)||(12338874-12338920)
chr3 (23-93)||(14667888-14667958)
chr3 (23-64)||(11301411-11301452)
chr3 (23-64)||(14667884-14667925)
chr3 (231-268)||(14681626-14681663)
chr3 (23-64)||(27410961-27411002)
chr3 (23-59)||(8490251-8490287)
chr3 (255-305)||(12337300-12337348)
chr3 (23-62)||(14067919-14067958)
chr3 (25-64)||(14664720-14664759)
chr3 (23-93)||(17318336-17318409)
chr3 (23-62)||(17318372-17318411)
chr3 (23-61)||(1466061-1466099)
chr3 (23-61)||(1466102-1466140)
chr3 (30-64)||(4590027-4590061)
chr3 (43-93)||(12853049-12853099)
chr3 (23-73)||(14498269-14498319)
chr3 (51-89)||(14664761-14664799)
chr3 (51-93)||(14667921-14667963)
chr3 (28-93)||(14965643-14965709)
chr3 (28-93)||(16613516-16613582)
chr3 (28-93)||(22045671-22045737)
chr3 (23-61)||(49390348-49390386)
chr3 (8-64)||(4108385-4108442)
chr3 (8-64)||(4112237-4112294)
chr3 (23-64)||(7108569-7108610)
chr3 (23-64)||(7112504-7112545)
chr3 (23-64)||(11069021-11069062)
chr3 (23-64)||(11166723-11166764)
chr3 (28-92)||(11914694-11914759)
chr3 (23-64)||(15616508-15616549)
chr3 (23-60)||(16795741-16795778)
chr3 (23-64)||(22320537-22320578)
chr3 (23-64)||(22335592-22335633)
chr3 (28-92)||(24513320-24513385)
chr3 (44-92)||(24513354-24513403)
chr3 (23-64)||(28948715-28948756)
chr3 (23-64)||(30064720-30064761)
chr3 (23-64)||(55021858-55021899)
chr3 (261-305)||(3802014-3802058)
chr3 (23-59)||(6469694-6469730)
chr3 (61-93)||(7108606-7108638)
chr3 (61-93)||(7112541-7112573)
chr3 (61-93)||(11069058-11069090)
chr3 (61-93)||(11166695-11166727)
chr3 (23-59)||(12853095-12853131)
chr3 (61-93)||(14498315-14498347)
chr3 (261-305)||(14764786-14764830)
chr3 (61-93)||(15616545-15616577)
chr3 (23-59)||(15977066-15977102)
chr3 (23-59)||(16751598-16751634)
chr3 (23-59)||(19774530-19774566)
chr3 (261-305)||(20249840-20249884)
chr3 (23-59)||(21618029-21618065)
chr3 (61-93)||(22320574-22320606)
chr3 (61-93)||(22335629-22335661)
chr3 (23-59)||(28849174-28849210)
chr3 (61-93)||(28948752-28948784)
chr3 (261-305)||(29545929-29545973)
chr3 (61-93)||(30064757-30064789)
chr3 (23-59)||(36166135-36166171)
chr3 (23-59)||(45578386-45578422)
chr3 (261-305)||(54519641-54519685)
chr3 (61-93)||(55021895-55021927)
[»] chr2 (31 HSPs)
chr2 (197-305)||(24629972-24630082)
chr2 (197-305)||(24645195-24645305)
chr2 (197-305)||(24647971-24648081)
chr2 (197-305)||(27600415-27600525)
chr2 (197-305)||(30346582-30346692)
chr2 (197-305)||(27380918-27381028)
chr2 (197-305)||(27384888-27384998)
chr2 (197-305)||(10103221-10103331)
chr2 (197-305)||(12902531-12902641)
chr2 (233-305)||(31343961-31344035)
chr2 (235-305)||(9784038-9784108)
chr2 (28-93)||(20634480-20634546)
chr2 (28-93)||(27471959-27472025)
chr2 (42-93)||(13102053-13102105)
chr2 (212-274)||(20319664-20319727)
chr2 (28-82)||(34874793-34874848)
chr2 (23-69)||(24629674-24629720)
chr2 (23-64)||(10103003-10103044)
chr2 (8-64)||(24648258-24648315)
chr2 (23-64)||(27600702-27600743)
chr2 (23-64)||(30346210-30346251)
chr2 (261-305)||(6481828-6481872)
chr2 (261-305)||(6485295-6485339)
chr2 (61-93)||(10102975-10103007)
chr2 (261-305)||(19663548-19663592)
chr2 (261-305)||(20260301-20260345)
chr2 (61-93)||(24629646-24629678)
chr2 (61-93)||(27600739-27600771)
chr2 (23-59)||(28576693-28576729)
chr2 (61-93)||(30346182-30346214)
chr2 (23-59)||(45030404-45030440)
[»] chr1 (64 HSPs)
chr1 (197-305)||(1009306-1009416)
chr1 (197-305)||(1926720-1926830)
chr1 (197-305)||(16376740-16376850)
chr1 (197-305)||(20925734-20925844)
chr1 (197-305)||(52634312-52634422)
chr1 (197-305)||(21406297-21406402)
chr1 (231-305)||(22132059-22132133)
chr1 (220-305)||(20230090-20230173)
chr1 (10-64)||(41389547-41389601)
chr1 (10-82)||(39245099-39245170)
chr1 (10-82)||(39248654-39248725)
chr1 (233-305)||(33796077-33796151)
chr1 (46-93)||(39244866-39244913)
chr1 (46-93)||(39248421-39248468)
chr1 (46-93)||(41389314-41389361)
chr1 (23-93)||(28195094-28195164)
chr1 (23-93)||(33796313-33796382)
chr1 (23-93)||(35982327-35982397)
chr1 (231-305)||(41801239-41801313)
chr1 (23-93)||(22131829-22131899)
chr1 (23-85)||(41801080-41801142)
chr1 (46-93)||(20229926-20229973)
chr1 (23-85)||(20229969-20230031)
chr1 (23-81)||(22131898-22131956)
chr1 (10-93)||(33796417-33796501)
chr1 (23-62)||(21406430-21406469)
chr1 (23-62)||(22131862-22131901)
chr1 (23-62)||(33796415-33796454)
chr1 (22-85)||(41306223-41306286)
chr1 (23-85)||(20315606-20315668)
chr1 (23-85)||(20315794-20315855)
chr1 (23-93)||(21740434-21740503)
chr1 (23-64)||(21406538-21406579)
chr1 (23-64)||(33796276-33796317)
chr1 (28-82)||(13883242-13883297)
chr1 (22-85)||(21740400-21740463)
chr1 (22-85)||(21740465-21740528)
chr1 (23-93)||(22131793-22131866)
chr1 (23-62)||(35982360-35982399)
chr1 (28-82)||(12271028-12271082)
chr1 (46-92)||(20315849-20315895)
chr1 (23-93)||(21740369-21740438)
chr1 (28-93)||(22357214-22357280)
chr1 (28-93)||(22358900-22358966)
chr1 (23-93)||(41306257-41306326)
chr1 (51-93)||(41801075-41801117)
chr1 (23-64)||(1009593-1009634)
chr1 (23-64)||(1926348-1926389)
chr1 (23-64)||(16376599-16376640)
chr1 (23-64)||(20925362-20925403)
chr1 (28-85)||(21740341-21740398)
chr1 (44-93)||(35982315-35982364)
chr1 (23-64)||(52634679-52634720)
chr1 (61-93)||(1009630-1009662)
chr1 (61-93)||(1926320-1926352)
chr1 (261-305)||(16370969-16371013)
chr1 (61-93)||(16376571-16376603)
chr1 (23-55)||(20230002-20230034)
chr1 (61-93)||(20925334-20925366)
chr1 (61-93)||(21406575-21406607)
chr1 (23-59)||(39244909-39244945)
chr1 (23-59)||(39248464-39248500)
chr1 (23-59)||(41389357-41389393)
chr1 (61-93)||(52634716-52634748)
[»] scaffold0372 (2 HSPs)
scaffold0372 (197-305)||(6245-6355)
scaffold0372 (61-93)||(6186-6218)
[»] scaffold0028 (1 HSPs)
scaffold0028 (197-305)||(60249-60360)
[»] scaffold0349 (3 HSPs)
scaffold0349 (197-305)||(11095-11204)
scaffold0349 (23-64)||(11387-11428)
scaffold0349 (61-93)||(11424-11456)
[»] scaffold0157 (1 HSPs)
scaffold0157 (197-305)||(34055-34162)
[»] scaffold0525 (3 HSPs)
scaffold0525 (197-305)||(5457-5565)
scaffold0525 (23-64)||(5053-5094)
scaffold0525 (61-93)||(5025-5057)
[»] scaffold0575 (1 HSPs)
scaffold0575 (231-305)||(6921-6995)
[»] scaffold0380 (5 HSPs)
scaffold0380 (215-305)||(4018-4108)
scaffold0380 (226-270)||(1-45)
scaffold0380 (23-62)||(829-868)
scaffold0380 (23-64)||(940-981)
scaffold0380 (61-93)||(977-1009)
[»] scaffold0124 (3 HSPs)
scaffold0124 (215-305)||(25512-25602)
scaffold0124 (23-93)||(25400-25470)
scaffold0124 (23-81)||(25433-25491)
[»] scaffold0410 (1 HSPs)
scaffold0410 (233-305)||(14888-14962)
[»] scaffold0029 (6 HSPs)
scaffold0029 (197-305)||(62771-62874)
scaffold0029 (10-93)||(79450-79533)
scaffold0029 (46-93)||(62553-62600)
scaffold0029 (46-93)||(66469-66516)
scaffold0029 (23-64)||(79413-79454)
scaffold0029 (25-62)||(62706-62743)
[»] scaffold0293 (3 HSPs)
scaffold0293 (231-305)||(21299-21374)
scaffold0293 (23-92)||(21151-21220)
scaffold0293 (51-93)||(21146-21188)
[»] scaffold0139 (1 HSPs)
scaffold0139 (197-274)||(22285-22359)
[»] scaffold0601 (4 HSPs)
scaffold0601 (23-93)||(8575-8645)
scaffold0601 (23-93)||(8608-8678)
scaffold0601 (23-85)||(8542-8604)
scaffold0601 (23-75)||(8641-8693)
[»] scaffold0327 (6 HSPs)
scaffold0327 (231-305)||(18867-18941)
scaffold0327 (51-93)||(19150-19192)
scaffold0327 (51-93)||(19254-19296)
scaffold0327 (23-64)||(19113-19154)
scaffold0327 (23-93)||(19117-19187)
scaffold0327 (23-64)||(19217-19258)
[»] scaffold0109 (2 HSPs)
scaffold0109 (220-305)||(37149-37232)
scaffold0109 (23-59)||(37065-37101)
[»] scaffold0486 (2 HSPs)
scaffold0486 (252-305)||(8621-8674)
scaffold0486 (25-64)||(8870-8909)
[»] scaffold0142 (2 HSPs)
scaffold0142 (231-304)||(8700-8773)
scaffold0142 (23-59)||(8514-8550)
[»] scaffold0166 (2 HSPs)
scaffold0166 (252-304)||(11041-11093)
scaffold0166 (23-64)||(10761-10802)
[»] scaffold1852 (2 HSPs)
scaffold1852 (233-305)||(781-855)
scaffold1852 (25-81)||(401-457)
[»] scaffold0674 (1 HSPs)
scaffold0674 (28-93)||(2994-3060)
[»] scaffold0200 (4 HSPs)
scaffold0200 (43-93)||(11116-11166)
scaffold0200 (23-93)||(11083-11153)
scaffold0200 (23-64)||(11046-11087)
scaffold0200 (23-93)||(11050-11120)
[»] scaffold0013 (3 HSPs)
scaffold0013 (231-305)||(74292-74366)
scaffold0013 (215-277)||(74240-74303)
scaffold0013 (23-92)||(74072-74142)
[»] scaffold0031 (3 HSPs)
scaffold0031 (231-305)||(37162-37237)
scaffold0031 (23-90)||(37051-37117)
scaffold0031 (51-93)||(37046-37088)
[»] scaffold0023 (1 HSPs)
scaffold0023 (233-305)||(11821-11895)
[»] scaffold0004 (5 HSPs)
scaffold0004 (22-85)||(362054-362117)
scaffold0004 (22-85)||(362152-362215)
scaffold0004 (23-85)||(362022-362083)
scaffold0004 (23-93)||(362177-362246)
scaffold0004 (28-85)||(362217-362274)
[»] scaffold0299 (3 HSPs)
scaffold0299 (23-93)||(6042-6112)
scaffold0299 (47-93)||(6075-6121)
scaffold0299 (255-305)||(5869-5917)
[»] scaffold0165 (4 HSPs)
scaffold0165 (23-81)||(2886-2944)
scaffold0165 (23-81)||(6949-7007)
scaffold0165 (23-93)||(2907-2977)
scaffold0165 (23-93)||(6970-7040)
[»] scaffold1873 (1 HSPs)
scaffold1873 (201-265)||(717-779)
[»] scaffold0278 (4 HSPs)
scaffold0278 (22-85)||(6960-7023)
scaffold0278 (22-85)||(7025-7088)
scaffold0278 (23-85)||(6928-6989)
scaffold0278 (23-93)||(6985-7054)
[»] scaffold0116 (4 HSPs)
scaffold0116 (22-85)||(44420-44483)
scaffold0116 (22-85)||(44485-44548)
scaffold0116 (23-93)||(44454-44523)
scaffold0116 (23-85)||(44519-44580)
[»] scaffold0025 (1 HSPs)
scaffold0025 (28-92)||(75856-75921)
[»] scaffold0484 (2 HSPs)
scaffold0484 (23-62)||(21-60)
scaffold0484 (37-93)||(23-79)
[»] scaffold0032 (1 HSPs)
scaffold0032 (28-82)||(66746-66801)
[»] scaffold0561 (1 HSPs)
scaffold0561 (28-93)||(10109-10175)
[»] scaffold0239 (1 HSPs)
scaffold0239 (28-93)||(22114-22180)
[»] scaffold0125 (1 HSPs)
scaffold0125 (28-93)||(2461-2527)
[»] scaffold0076 (1 HSPs)
scaffold0076 (28-93)||(26790-26856)
[»] scaffold0043 (2 HSPs)
scaffold0043 (23-85)||(9037-9098)
scaffold0043 (43-85)||(9069-9111)
[»] scaffold0037 (1 HSPs)
scaffold0037 (28-93)||(68805-68871)
[»] scaffold0020 (1 HSPs)
scaffold0020 (28-92)||(170395-170460)
[»] scaffold0017 (1 HSPs)
scaffold0017 (22-82)||(8527-8588)
[»] scaffold1427 (1 HSPs)
scaffold1427 (261-305)||(244-288)
[»] scaffold0842 (1 HSPs)
scaffold0842 (261-305)||(5286-5330)
[»] scaffold0337 (1 HSPs)
scaffold0337 (261-305)||(10812-10856)
[»] scaffold0080 (2 HSPs)
scaffold0080 (261-305)||(28516-28560)
scaffold0080 (261-305)||(33981-34025)
[»] scaffold0026 (1 HSPs)
scaffold0026 (261-305)||(109645-109689)
[»] scaffold0022 (1 HSPs)
scaffold0022 (23-59)||(116000-116036)
[»] scaffold0012 (1 HSPs)
scaffold0012 (261-305)||(224133-224177)
[»] scaffold0008 (1 HSPs)
scaffold0008 (23-59)||(71509-71545)


Alignment Details
Target: scaffold0061 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 68480 - 68590
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  68480 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 68579  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  68580 ttaagtgtact 68590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 68326 - 68383
Alignment:
Q  8 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||| |||||| |||||||   |||| ||||||||||||||||||||||    
T  68326 tttggtgttagtatgtgttgattatattttcataagatgatgaatatgttgttgttat 68383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 3e-42; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 21974108 - 21974218
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  21974108 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 21974207  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  21974208 ttaagtgtact 21974218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 21978218 - 21978328
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  21978218 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 21978317  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  21978318 ttaagtgtact 21978328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 43250356 - 43250246
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||| |||||||||||| |||| |||||||||||||||    
T  43250356 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattaatgatgatgattacatgatgatatctatgagttg 43250257  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  43250256 ttaagtgtact 43250246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 21386311 - 21386203
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgtt 296  Q
    ||||||||||| |||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||| | |||||| ||||||||    
T  21386311 gttatgatgtatataattattattattattaagtgatgattatattgtgtagtttaagttattagtgatgatgattacatgatgttatctaggagttgtt 21386212  T
Q  297 aagtgtact 305  Q
    || ||||||    
T  21386211 aaatgtact 21386203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 21829396 - 21829472
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  21829396 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgat 21829472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 22110744 - 22110668
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgat 271  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||  ||||||||||||||||||||    
T  22110744 gttatgatgtagataattattaatattaataagagatgattatattatgttgttttaaagttattagtgatgatgat 22110668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 231 - 305
Target Start/End: Complemental strand, 23427944 - 23427870
Alignment:
Q  231 gatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||||| || ||||||||||||||||||||||| |||| | ||||||||||||||||| ||||||    
T  23427944 gatgattatattgtgttgtctaagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 23427870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 231 - 305
Target Start/End: Complemental strand, 23913383 - 23913309
Alignment:
Q  231 gatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||| | ||||||| ||||||||| ||||||    
T  23913383 gatgattatattgtgttgtttaagttattagtgatgatgattacatgatgttatctataagttgttaaatgtact 23913309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 44385794 - 44385868
Alignment:
Q  231 gatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||||| ||||||||| |||||||||||||||| |||| | ||||||||||||||||| ||||||    
T  44385794 gatgattatattgtgttgtttaagttgttagtgatgatgattacatgatgttatctatgagttgttaaatgtact 44385868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 14399053 - 14399127
Alignment:
Q  233 tgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||| ||||||| ||||  |||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  14399053 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 14399127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 21410019 - 21409945
Alignment:
Q  233 tgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||| ||||||| ||||  |||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  21410019 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 21409945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 21804511 - 21804437
Alignment:
Q  233 tgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||| ||||||| ||||  |||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  21804511 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 21804437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 1323713 - 1323776
Alignment:
Q  22 gtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||||  || |||||||||||||||||||||||| || | |||||||||||||||    
T  1323713 gtgttgttatattatgatgaaatgatgaatatgttgttgttatattattataagatgatgaata 1323776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 15924282 - 15924329
Alignment:
Q  46 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  15924282 atgaatatgttattgttatattttcataagatgatgaatacgttgttg 15924329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 20983505 - 20983573
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgt 91  Q
    ||||||||||||| ||||| |||| |||||||||| |||||| || | ||||||||||||||| |||||    
T  20983505 tgttgttatattattataagatgaggaatatgttgatgttatattattataagatgatgaatatgttgt 20983573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 20983541 - 20983607
Alignment:
Q  26 tgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgtt 92  Q
    |||||||||| ||||| |||||||||||||||| ||||| || | |||||||||| |||| ||||||    
T  20983541 tgttatattattataagatgatgaatatgttgtggttatattattataagatgataaatatgttgtt 20983607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 13428678 - 13428741
Alignment:
Q  22 gtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||||  || | |||||||||||||||||| ||| || | |||||||||||||||    
T  13428678 gtgttgttatattatgatgagatgatgaatatgttgttgctatattattataagatgatgaata 13428741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 20983480 - 20983539
Alignment:
Q  31 tattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttg 90  Q
    ||||| ||||| |||||||||||||||||||||| || | ||||||||| ||||| ||||    
T  20983480 tattattataagatgatgaatatgttgttgttatattattataagatgaggaatatgttg 20983539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 38550621 - 38550684
Alignment:
Q  22 gtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    |||||||||||||   || | |||||||||||||||||||||| || | |||||||||||||||    
T  38550621 gtgttgttatattttgatgagatgatgaatatgttgttgttatattattataagatgatgaata 38550684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 38550686 - 38550749
Alignment:
Q  22 gtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    |||||||| |||||  || | |||||||||||||||||||||| || | |||||||||||||||    
T  38550686 gtgttgttgtattatgatgagatgatgaatatgttgttgttatattattataagatgatgaata 38550749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 1323747 - 1323816
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||| |||||||||||| ||||||||| || | || |||||||||||  |||||||    
T  1323747 tgttgttatattattataagatgatgaatatg-tgttgttatattatgatgagatgatgaatttgttgttg 1323816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 17461655 - 17461721
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||| ||||| |||||||||||||||||| ||||||  | |||||||||||| || |||||||    
T  17461655 ttatattattataagatgatgaatatgttgttgcttatgtcattataagatgatgattatgttgttg 17461721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 22238598 - 22238664
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||| ||||| |||||||||||||||||| ||||||| | || ||||||||| || |||||||    
T  22238598 ttatattattataagatgatgaatatgttgttgcttatgttattattagatgatgattatgttgttg 22238664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 38550655 - 38550724
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||| |||||||||||| ||||||| | || | || |||||||||||| |||||||    
T  38550655 tgttgttatattattataagatgatgaatatg-tgttgttgtattatgatgagatgatgaatatgttgttg 38550724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 38550720 - 38550781
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||| ||||| |||||||||||| ||||||| | || | |||||||||||||||    
T  38550720 tgttgttatattattataagatgatgaatatg-tgttgttgtattattataagatgatgaata 38550781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 21829137 - 21829194
Alignment:
Q  8 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||| |||||| |||||||  ||||| ||||||||||||||||| ||||    
T  21829137 tttggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttattat 21829194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 21973736 - 21973777
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  21973736 tgttgttatattaatacaagaagatgaatatgttgttgttat 21973777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 21977846 - 21977887
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  21977846 tgttgttatattaatacaagaagatgaatatgttgttgttat 21977887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 22110962 - 22110921
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  22110962 tgttgttatattaatacaagaagatgaatatgttgttgttat 22110921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 43250722 - 43250681
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  43250722 tgttgttatattaatacaagaagatgaatatgttgttgttat 43250681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 20046715 - 20046751
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  20046715 tgttgttatatcaatataagatgatgaatatgttgtt 20046751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 21977799 - 21977831
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  21977799 ttatattttcataagatgatgaatacgttgttg 21977831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 22110990 - 22110958
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  22110990 ttatattttcataagatgatgaatacgttgttg 22110958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 274
Target Start/End: Complemental strand, 37515148 - 37515104
Alignment:
Q  231 gatgattatattgtgtagtttaagttatta-gtgatgatgattat 274  Q
    |||||||||||||||| ||||||||||||| | ||||||||||||    
T  37515148 gatgattatattgtgttgtttaagttattatgagatgatgattat 37515104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 43250750 - 43250718
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  43250750 ttatattttcataagatgatgaatacgttgttg 43250718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 3e-42; HSPs: 103)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 31879 - 31769
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  31879 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 31780  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  31779 ttaagtgtact 31769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 12706047 - 12706157
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  12706047 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 12706146  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  12706147 ttaagtgtact 12706157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 12713694 - 12713584
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  12713694 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 12713595  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  12713594 ttaagtgtact 12713584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 12717441 - 12717331
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  12717441 gttatgatgtagataattattactattaatgagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 12717342  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  12717341 ttaagtgtact 12717331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 16908434 - 16908544
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  16908434 gttatgatatagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 16908533  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  16908534 ttaagtgtact 16908544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 12722352 - 12722242
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  12722352 gttatgatatagataattattactattaatgagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 12722253  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  12722252 ttaagtgtact 12722242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 18278148 - 18278038
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||  |||| |||||||||||||||    
T  18278148 gttatgatgtagacaattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattgcatgatgatatctatgagttg 18278049  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  18278048 ttaagtgtact 18278038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 18282112 - 18282002
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||  ||||| |||||||||||||||| |||| |||||||||||||||    
T  18282112 gttatgatgtagacaattattactattaataagagatgattatattgtgttgttttaaagtttttagtgatgatgattacatgatgatatctatgagttg 18282013  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  18282012 ttaagtgtact 18282002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 72307 - 72383
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  72307 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgat 72383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 76416 - 76492
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  76416 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgat 76492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 231 - 305
Target Start/End: Complemental strand, 20486860 - 20486786
Alignment:
Q  231 gatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||| | ||||||||||||||||| ||||||    
T  20486860 gatgattatattgtgttgtttaagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 20486786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 2531293 - 2531367
Alignment:
Q  233 tgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||| ||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2531293 tgattacattgtgttgttttaaagttattagtgatgatgattatatgaagatatctatgagttgttaggtgtact 2531367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 305
Target Start/End: Original strand, 9752452 - 9752542
Alignment:
Q  215 attactattaataagagatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||| ||||| |||| |||||| ||||||||| ||||||||||||||||||||| |||| |||| | ||||||||||||||||| ||||||    
T  9752452 attattattattaagtgatgatcatattgtgttgtttaagttattagtgatgataattacatgatgttatctatgagttgttaaatgtact 9752542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 10607281 - 10607355
Alignment:
Q  231 gatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||||| |||||| ||||||||||||||||||| |||| | ||||||||||||||||| ||||||    
T  10607281 gatgattatattgtgttgtttaatttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 10607355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 305
Target Start/End: Complemental strand, 18301485 - 18301395
Alignment:
Q  215 attactattaataagagatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||| ||||| |||| || ||||||||||||| |||||||||||||||||||||||||| |||| | |||||| |||||||||| ||||||    
T  18301485 attattattattaagtgacgattatattgtgttgtttaagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtact 18301395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 18424428 - 18424374
Alignment:
Q  10 tggtgttagtacgtgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18424428 tggtgttagtacgtgttgttatattaatataaaatgataaatatgttgttgttat 18424374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 220 - 305
Target Start/End: Complemental strand, 26291284 - 26291201
Alignment:
Q  220 tattaataagagatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    ||||| |||| | ||||||||||||  ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||    
T  26291284 tattattaagtggtgattatattgt--agtttaagttattagtgatgatgattacatgatgttatctatgagttgttaagtgtact 26291201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 2833442 - 2833516
Alignment:
Q  233 tgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||| ||||||| ||||  |||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  2833442 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 2833516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 15083344 - 15083270
Alignment:
Q  233 tgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||| ||||||| ||||  |||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  15083344 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 15083270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 18424775 - 18424728
Alignment:
Q  46 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18424775 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 18424728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 25928331 - 25928406
Alignment:
Q  231 gatgattatattgtgtagtttaa-gttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||||| |||||| |||||||||||||||||||| |||| | ||||||||||||||||| ||||||    
T  25928331 gatgattatattgtgttgtttaaagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 25928406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 1859953 - 1860056
Alignment:
Q  201 tgatgtagataattattactattaataagagatgattatattgtgtagtttaagttattagtga-tgatgattatatgaagatatctatgagttgttaag 299  Q
    ||||||| |||||||||| ||||||  || |||||||||||||||| ||||||||||||||||| ||||||||| | || | ||| |||||||||||||     
T  1859953 tgatgtatataattattattattaa--agtgatgattatattgtgttgtttaagttattagtgattgatgattacaggatgttatatatgagttgttaaa 1860050  T
Q  300 tgtact 305  Q
    ||||||    
T  1860051 tgtact 1860056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 2833162 - 2833231
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||  ||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  2833162 tgttgttatatttttataagatgatgaatatgttgttgttatatttt-ataagatgatgaatacgttgttg 2833231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 231 - 305
Target Start/End: Complemental strand, 16582539 - 16582465
Alignment:
Q  231 gatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||||| |||||| ||||||||||||||||||| |||| | ||| ||||||||||||| ||||||    
T  16582539 gatgattatattgtgttgtttaatttattagtgatgatgattacatgatgttatttatgagttgttaaatgtact 16582465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 25928183 - 25928252
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgtt 92  Q
    ||||||||||||  ||||| |||||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  25928183 tgttgttatatttttataagatgatgaatatgttgttgttatatttttataagatgatgaatatgttgtt 25928252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 18424662 - 18424615
Alignment:
Q  46 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18424662 atgaatatgttgttgctatgttttcataagatgatgaatacgttgttg 18424615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 6170747 - 6170817
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||| |||||||||||||||||||||| || | |||||||||| |||| |||||||    
T  6170747 tgttgttatattattataagatgatgaatatgttgttgttatattattataagatgatcaatatgttgttg 6170817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 9390364 - 9390434
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||| |||||||||||| ||||||||| || | ||||||||||||||| |||||||    
T  9390364 tgttgttatattattataagatgatgaatatgatgttgttatattattataagatgatgaatatgttgttg 9390434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 16582757 - 16582687
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||||||||||| |||||||||||||| |||  |||||||| |||||| |||||||    
T  16582757 tgttgttatattattataaaatgatgagtatgttgttgttatatttctataagatggtgaatatgttgttg 16582687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 18278403 - 18278318
Alignment:
Q  8 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| |||||| ||||||| |||||| |||||||||| ||||||| ||| | || |||||||||||||||||||||||    
T  18278403 tttggtgttagtatgtgttgattatatttatataagatgatgaatacgttgttgctatatctt-ataagatgatgaatacgttgttg 18278318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 18282366 - 18282281
Alignment:
Q  8 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| |||||| ||||||| |||||| |||||||||| || |||| ||| |||| |||||||||||||||||||||||    
T  18282366 tttggtgttagtatgtgttgattatatttatataagatgatgaatacgtcgttgctatatttt-ataagatgatgaatacgttgttg 18282281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 13919372 - 13919447
Alignment:
Q  231 gatgattatattgtgtagtttaagttattagtga-tgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||||| ||||||||||||||||| ||||||||| | || | ||| ||||||||||||| ||||||    
T  13919372 gatgattatattgtgttgtttaagttattagtgattgatgattacaggatgttatatatgagttgttaaatgtact 13919447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 26291443 - 26291396
Alignment:
Q  46 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  26291443 atgaatatgttattgttatattttcataagatgatgaatacgttgttg 26291396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 39721314 - 39721240
Alignment:
Q  233 tgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||| ||||||| ||||  ||||||||||| |||||||||| |||| ||||||||||||||||||| ||||||    
T  39721314 tgattacattgtgttgttttaaagttattagtaatgatgattacatgatgatatctatgagttgttaaatgtact 39721240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 6170780 - 6170850
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||| ||||| ||||||||||||| || || | ||||||||||||||| |||||||    
T  6170780 tgttgttatattattataagatgatcaatatgttgttgtcatattattataagatgatgaatatgttgttg 6170850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 16582823 - 16582753
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| |||||||| |||| |||||||||||||| |||  |||||||| |||||| |||||||    
T  16582823 tgttgttatattattataaaataatgagtatgttgttgttatatttctataagatggtgaatatgttgttg 16582753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 20486971 - 20486903
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgtt 92  Q
    ||||||||||||  ||||| |||||||||||||||||| ||| |||| ||||||||||||||| ||||||    
T  20486971 tgttgttatatttttataagatgatgaatatgttgttg-tatatttttataagatgatgaatatgttgtt 20486903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 7520176 - 7520250
Alignment:
Q  233 tgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||| ||||||| ||||  ||||||| |||||||||||||| |||| | ||||||||||||||||| ||||||    
T  7520176 tgattacattgtgttgttttaaagttatcagtgatgatgattacatgatgttatctatgagttgttaaatgtact 7520250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 14270735 - 14270798
Alignment:
Q  22 gtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||||  || | |||||||||||||||||||||| || | |||||||||||||||    
T  14270735 gtgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatgaata 14270798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 17231919 - 17231856
Alignment:
Q  22 gtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||||  || | |||||||||||||||||||||| || | |||||||||||||||    
T  17231919 gtgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatgaata 17231856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 17231984 - 17231921
Alignment:
Q  22 gtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||||  || | |||||||||||||||||||||| || | |||||||||||||||    
T  17231984 gtgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatgaata 17231921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 17232049 - 17231986
Alignment:
Q  22 gtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||||  || | |||||||||||||||||||||| || | |||||||||||||||    
T  17232049 gtgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatgaata 17231986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 18301567 - 18301528
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgtt 62  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  18301567 tgttgttatattattataaaatgatgaatatgttgttgtt 18301528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 93
Target Start/End: Original strand, 2531040 - 2531082
Alignment:
Q  51 tatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||||||||| ||||||||||||||||| ||||||||||    
T  2531040 tatgttgttgttatattttcataagatgatgattacgttgttg 2531082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 6170813 - 6170883
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||| |||||| ||||| ||||||||||||||||||| || || | ||||||||||||| | |||||||    
T  6170813 tgttgtcatattattataagatgatgaatatgttgttgtcatattattataagatgatgaacatgttgttg 6170883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 14270704 - 14270773
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||| |||||||||||| ||||||||| || | || |||||||||||| |||||||    
T  14270704 tgttgttatattattataagatgatgaatatg-tgttgttatattatgatgagatgatgaatatgttgttg 14270773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 16582724 - 16582662
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||  ||||| ||| |||||||||||||||||| || | |||||||||||||||    
T  16582724 tgttgttatatttctataagatggtgaatatgttgttgttatattattataagatgatgaata 16582662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 17231950 - 17231881
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||| |||||||||||| ||||||||| || | || |||||||||||| |||||||    
T  17231950 tgttgttatattattataagatgatgaatatg-tgttgttatattatgatgagatgatgaatatgttgttg 17231881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 17232015 - 17231946
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||| |||||||||||| ||||||||| || | || |||||||||||| |||||||    
T  17232015 tgttgttatattattataagatgatgaatatg-tgttgttatattatgatgagatgatgaatatgttgttg 17231946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 17232080 - 17232011
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||| |||||||||||| ||||||||| || | || |||||||||||| |||||||    
T  17232080 tgttgttatattattataagatgatgaatatg-tgttgttatattatgatgagatgatgaatatgttgttg 17232011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 26291400 - 26291338
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||||||||| |  ||||||||||||||||||| || | |||| ||||||||||    
T  26291400 tgttgttatattaatataagaaaatgaatatgttgttgttatattattataaaatgatgaata 26291338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 18278290 - 18278249
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  18278290 tgttgttatattaatataagaagatgaatatgttgttgttat 18278249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 18282253 - 18282212
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  18282253 tgttgttatattaatataagaagatgaatatgttgttgttat 18282212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 8467921 - 8467861
Alignment:
Q  25 ttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    |||||||||||  || | |||||||||||||||||||||| || | |||||||||||||||    
T  8467921 ttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatgaata 8467861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 18278341 - 18278286
Alignment:
Q  37 tataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||| |||||||||| ||||||||||| |||| |||||||||||||||| ||||||    
T  18278341 tataagatgatgaatacgttgttgttatatttt-ataagatgatgaatacattgttg 18278286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 18282304 - 18282249
Alignment:
Q  37 tataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||| |||||||||| ||||||||||| |||| |||||||||||||||| ||||||    
T  18282304 tataagatgatgaatacgttgttgttatatttt-ataagatgatgaatacattgttg 18282249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 8467989 - 8467926
Alignment:
Q  22 gtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||||  || | ||||||||||||||||||||| ||| | || ||||||||||||    
T  8467989 gtgttgttatattatgatgagatgatgaatatgttgttgttaagttattatgagatgatgaata 8467926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 9390397 - 9390436
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgtt 62  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  9390397 tgttgttatattattataagatgatgaatatgttgttgtt 9390436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 58
Target Start/End: Original strand, 10607161 - 10607196
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgt 58  Q
    ||||||||||||| ||||||||||||||||||||||    
T  10607161 tgttgttatattattataaaatgatgaatatgttgt 10607196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 14270670 - 14270733
Alignment:
Q  22 gtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||||  || | ||||||||||| |||||||||| || | |||||||||||||||    
T  14270670 gtgttgttatattatgatgagatgatgaatattttgttgttatattattataagatgatgaata 14270733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 17232114 - 17232051
Alignment:
Q  22 gtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    |||||||||| |||  || | |||||||||||||||||||||| || | |||||||||||||||    
T  17232114 gtgttgttatgttatgatgagatgatgaatatgttgttgttatattattataagatgatgaata 17232051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 305
Target Start/End: Original strand, 39268301 - 39268348
Alignment:
Q  258 ttagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||||| |||| | ||||||||||||||||| ||||||    
T  39268301 ttagtgatgatgattacatgatgttatctatgagttgttaaatgtact 39268348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 93
Target Start/End: Original strand, 2833157 - 2833199
Alignment:
Q  51 tatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||||||||| |||| ||||||||||||||| |||||||    
T  2833157 tatgttgttgttatatttttataagatgatgaatatgttgttg 2833199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 2833195 - 2833264
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||  ||||| |||||||||| ||||||||||| || | |||||| |||||||| |||||||    
T  2833195 tgttgttatattt-tataagatgatgaatacgttgttgttatattattataagaagatgaatatgttgttg 2833264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 9390351 - 9390393
Alignment:
Q  43 atgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    |||||||||||||||||||||| || | |||||||||||||||    
T  9390351 atgatgaatatgttgttgttatattattataagatgatgaata 9390393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 9752340 - 9752410
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||  |||||||||||||||||||||| ||   ||| ||| ||||||| |||||||    
T  9752340 tgttgttatattattatatgatgatgaatatgttgttgttatattactatatgattatgaatatgttgttg 9752410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 10607142 - 10607196
Alignment:
Q  37 tataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgt 91  Q
    ||||| |||||||||||||||||||||| || | |||| |||||||||| |||||    
T  10607142 tataagatgatgaatatgttgttgttatattattataaaatgatgaatatgttgt 10607196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 12556494 - 12556440
Alignment:
Q  29 tatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatga 82  Q
    ||||||| ||||| |||||||||||||||||| ||||||| | ||||||||||||    
T  12556494 tatattattataagatgatgaatatgttgttgcttatgttattataagatgatga 12556440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 15112406 - 15112352
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatga 82  Q
    |||||||| ||||| |||||||||||||||||||||| || | || |||||||||    
T  15112406 ttatattattataagatgatgaatatgttgttgttatattattatgagatgatga 15112352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 15115978 - 15115924
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatga 82  Q
    |||||||| ||||| |||||||||||||||||||||| || | || |||||||||    
T  15115978 ttatattattataagatgatgaatatgttgttgttatattattatgagatgatga 15115924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 16582790 - 16582720
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||  ||||| ||| |||||||||||||||||| || | |||| ||||||| || |||||||    
T  16582790 tgttgttatatttctataagatggtgaatatgttgttgttatattattataaaatgatgagtatgttgttg 16582720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 16998141 - 16998075
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||| ||||| |||||||||||||||||| |||| || | |||||||||||| || |||||||    
T  16998141 ttatattattataagatgatgaatatgttgttgcttatattattataagatgatgattatgttgttg 16998075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 17231885 - 17231824
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||| ||||| |||||||||||| ||||||| | || | |||||||||||||||    
T  17231885 tgttgttatattattataagatgatgaatatg-tgttgttgtattattataagatgatgaata 17231824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 93
Target Start/End: Complemental strand, 20486976 - 20486934
Alignment:
Q  51 tatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||||||||| |||| ||||||||||||||| |||||||    
T  20486976 tatgttgttgttatatttttataagatgatgaatatgttgttg 20486934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 93
Target Start/End: Original strand, 25928178 - 25928220
Alignment:
Q  51 tatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||||||||| |||| ||||||||||||||| |||||||    
T  25928178 tatgttgttgttatatttttataagatgatgaatatgttgttg 25928220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 46581191 - 46581257
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||| ||||| |||||||||||||||||| ||| ||| | |||||||||||| || |||||||    
T  46581191 ttatattattataagatgatgaatatgttgttgcttaggttattataagatgatgattatgttgttg 46581257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 32020 - 31979
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  32020 tgttgttatattaatacaagaagatgaatatgttgttgttat 31979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 71968 - 72025
Alignment:
Q  8 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||| |||||| |||||||  ||||| ||||||||||||||||| ||||    
T  71968 tttggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttattat 72025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 76077 - 76134
Alignment:
Q  8 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||| |||||| |||||||  ||||| ||||||||||||||||| ||||    
T  76077 tttggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttattat 76134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 2531078 - 2531119
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||||||||| | |||||| |||||||||||||    
T  2531078 tgttgttatattaatataagaagatgaacatgttgttgttat 2531119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 2833227 - 2833268
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||| ||||| | ||||||||||||||||||||    
T  2833227 tgttgttatattattataagaagatgaatatgttgttgttat 2833268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 8939739 - 8939674
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgtt 92  Q
    |||| ||| ||||| |||||||||||||||||  ||||||| | ||||||||||||||| ||||||    
T  8939739 ttatgttattataagatgatgaatatgttgtttcttatgttattataagatgatgaatatgttgtt 8939674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 8939757 - 8939708
Alignment:
Q  44 tgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgtt 92  Q
    ||||||||||||||||| ||||||| | ||||||||||||||| ||||||    
T  8939757 tgatgaatatgttgttgcttatgttattataagatgatgaatatgttgtt 8939708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 12705813 - 12705870
Alignment:
Q  8 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||| |||||| |||||||   |||||| ||||||||||||||||||||    
T  12705813 tttggtgttagtatgtgttgattatattttcataaaaagatgaatatgttgttgttat 12705870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 12713835 - 12713794
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  12713835 tgttgttatattaatacaagaagatgaatatgttgttgttat 12713794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 12717659 - 12717618
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  12717659 tgttgttatattaatacaagaagatgaatatgttgttgttat 12717618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 12722570 - 12722529
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  12722570 tgttgttatattaatacaagaagatgaatatgttgttgttat 12722529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 16582691 - 16582623
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgtt 92  Q
    ||||||||||||| ||||| |||||||||||| ||||||| | || | |||||| |||||||| ||||||    
T  16582691 tgttgttatattattataagatgatgaatatg-tgttgttgtattattataagacgatgaatatgttgtt 16582623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 32048 - 32016
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  32048 ttatattttcataagatgatgaatacgttgttg 32016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 11660370 - 11660326
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    ||||||||||||| |||| | ||||||||||||||||| ||||||    
T  11660370 gtgatgatgattacatgatgttatctatgagttgttaaatgtact 11660326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 12713863 - 12713831
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  12713863 ttatattttcataagatgatgaatacgttgttg 12713831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 12717687 - 12717655
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  12717687 ttatattttcataagatgatgaatacgttgttg 12717655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 12722598 - 12722566
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  12722598 ttatattttcataagatgatgaatacgttgttg 12722566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 13891718 - 13891674
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    ||||||||||||| |||| | ||||||||||||||||| ||||||    
T  13891718 gtgatgatgattacatgatgttatctatgagttgttaaatgtact 13891674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 14272945 - 14272881
Alignment:
Q  30 atattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||| ||||| |||||||||||||||||| ||||||  | |||||||||||| || |||||||    
T  14272945 atattattataagatgatgaatatgttgttgcttatgtcattataagatgatgattatgttgttg 14272881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 14420875 - 14420831
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  14420875 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 14420831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 16005092 - 16005048
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  16005092 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 16005048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 18423313 - 18423277
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  18423313 tgttgttatatcaatataagatgatgaatatgttgtt 18423277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 18424619 - 18424583
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  18424619 tgttgttatattattataaagtgatgaatatgttgtt 18424583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 18606426 - 18606382
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  18606426 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 18606382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 18639870 - 18639834
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  18639870 tgttgttatatcaatataagatgatgaatatgttgtt 18639834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #102
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 18871385 - 18871341
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  18871385 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 18871341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #103
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 26291367 - 26291335
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgt 55  Q
    ||||||||||||| |||||||||||||||||||    
T  26291367 tgttgttatattattataaaatgatgaatatgt 26291335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 3e-42; HSPs: 58)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 8242566 - 8242456
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  8242566 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 8242467  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  8242466 ttaagtgtact 8242456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 11565555 - 11565445
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  11565555 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 11565456  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  11565455 ttaagtgtact 11565445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 12620258 - 12620368
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  12620258 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 12620357  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  12620358 ttaagtgtact 12620368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 22861909 - 22861799
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  22861909 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 22861810  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  22861809 ttaagtgtact 22861799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 23988457 - 23988347
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  23988457 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 23988358  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  23988357 ttaagtgtact 23988347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 199 - 305
Target Start/End: Complemental strand, 14471028 - 14470925
Alignment:
Q  199 tatgatgtagataattattactattaataagagatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaa 298  Q
    ||||||||| |||||||||| ||||||   | ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||     
T  14471028 tatgatgtatataattattattattaa---gtgatgattatattgtgtagtttaagttattagtgatgaagattatatgaagatatttatgagttgttag 14470932  T
Q  299 gtgtact 305  Q
    |||||||    
T  14470931 gtgtact 14470925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 278
Target Start/End: Complemental strand, 1643404 - 1643323
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagtttaagttattagtgatgatgattatatga 278  Q
    ||||||||||| |||||||||| || || |||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1643404 gttatgatgtatataattattattactattaagtgatgattatattgtgtagtttaagttattagtgatgatgattacatga 1643323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 16758858 - 16758782
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  || |||||||||||||||||    
T  16758858 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaatttattagtgatgatgat 16758782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 198 - 305
Target Start/End: Original strand, 18918511 - 18918615
Alignment:
Q  198 ttatgatgtagataattattactattaataagagatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgtta 297  Q
    |||||||||| |||||||||| ||||||   | |||||||||||||| |||||||||||||||||||||||||||| |||| | |||||| |||||||||    
T  18918511 ttatgatgtatataattattattattaa---gtgatgattatattgtatagtttaagttattagtgatgatgattacatgatgttatctaggagttgtta 18918607  T
Q  298 agtgtact 305  Q
    | ||||||    
T  18918608 aatgtact 18918615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 22947810 - 22947734
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgat 271  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  22947810 gttatgatgtatataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgat 22947734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 22951766 - 22951690
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgat 271  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  22951766 gttatgatgtatataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgat 22951690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 23870254 - 23870178
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgat 271  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  23870254 gttatgatgtatataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgat 23870178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 23874210 - 23874134
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgat 271  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  23874210 gttatgatgtatataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgat 23874134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 31479348 - 31479428
Alignment:
Q  10 tggtgttagtacgtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgt 91  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| | || |||||||||||| || |||||    
T  31479348 tggtgttagtacgtgttgttatattaatataaaatgataaatatgttgttgttatatatt-ataagatgatgattatgttgt 31479428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 2076404 - 2076332
Alignment:
Q  231 gatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgta 303  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||| | ||||||||||||||||| ||||    
T  2076404 gatgattatattgtgttgtttaagttattagtgatgatgattacatgatgttatctatgagttgttaaatgta 2076332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 220 - 305
Target Start/End: Complemental strand, 23400805 - 23400722
Alignment:
Q  220 tattaataagagatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    ||||| |||| ||||||||||||||  ||||||||||||||||||||||||||| |||| | ||||||||||||||||| ||||||    
T  23400805 tattattaagtgatgattatattgt--agtttaagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 23400722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 11716899 - 11716975
Alignment:
Q  231 gatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||| ||||||||||| ||||  ||||||||| |||||||||||| |||| ||||||||||||||||||||||||||    
T  11716899 gatgtttatattgtgttgttttaaagttattaatgatgatgattacatgatgatatctatgagttgttaagtgtact 11716975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 252 - 305
Target Start/End: Complemental strand, 27555636 - 27555583
Alignment:
Q  252 aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  27555636 aagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 27555583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 16623215 - 16623168
Alignment:
Q  46 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  16623215 atgaatatgttgttgttatgttttcataagatgatgaatatgttgttg 16623168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 18918401 - 18918448
Alignment:
Q  46 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18918401 atgaatatgttgttgttatattttcataagatgatgaatacgttgttg 18918448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 22075066 - 22075136
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||  ||||| |||||||||||||||||||||| |||| |||||||||| |||| |||||||    
T  22075066 tgttgttatatttttataagatgatgaatatgttgttgttatatttttataagatgattaatangttgttg 22075136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 16622982 - 16622933
Alignment:
Q  10 tggtgttagtacgtgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  16622982 tggtgttagtacgtgttgttatattaatataaaatgatagatatgttgtt 16622933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 221 - 305
Target Start/End: Original strand, 18953436 - 18953518
Alignment:
Q  221 attaataagagatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||| |||| ||||||||||||||  ||||||||||||||||||||||||||| |||| |  ||||| |||||||||| ||||||    
T  18953436 attattaagtgatgattatattgt--agtttaagttattagtgatgatgattacatgatgtcatctaggagttgttaaatgtact 18953518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 1643621 - 1643574
Alignment:
Q  46 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  1643621 atgaatatgttattgttatattttcataagatgatgaatacgttgttg 1643574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 2200880 - 2200814
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||| ||||| |||||||||||||||||| ||||||| | ||||||||||||||| |||||||    
T  2200880 ttatattattataagatgatgaatatgttgttgcttatgttattataagatgatgaatatgttgttg 2200814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 14471298 - 14471243
Alignment:
Q  10 tggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||| |||||| |||||||||||||| | ||||||||||||||||||||    
T  14471298 tggtgttagtatgtgttgattatattaatataagaagatgaatatgttgttgttat 14471243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 15874955 - 15874889
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||| ||||||||||||||||||||||||  |||||| | |||||||||||| || |||||||    
T  15874955 ttatattattataaaatgatgaatatgttgttgcgtatgttattataagatgatgattatgttgttg 15874889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 22075347 - 22075425
Alignment:
Q  233 tgattatattgtgtagttt--aagttattagtgatgatgattatatga----agatatctatgagttgttaagtgtact 305  Q
    |||||| ||||||| ||||  |||||||||||||||||||||| ||||    | |||||||||||||||||||||||||    
T  22075347 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatatatctatgagttgttaagtgtact 22075425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 22075132 - 22075173
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  22075132 tgttgttatattaatataagaagatgaatatgttgttgttat 22075173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 14981182 - 14981244
Alignment:
Q  215 attactattaataagagatgattatattgtgtagtttaagttatta-gtgatgatgattatat 276  Q
    |||| ||||| |||| ||||||||| |||||| ||||||||||||| | ||||||||||||||    
T  14981182 attattattattaagtgatgattatgttgtgttgtttaagttattatgagatgatgattatat 14981244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 18913361 - 18913300
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||| ||||| |||||||||||| ||||||| | || | |||||||||||||||    
T  18913361 tgttgttatattattataagatgatgaatatg-tgttgttgtattattataagatgatgaata 18913300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 93
Target Start/End: Original strand, 22075061 - 22075103
Alignment:
Q  51 tatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||||||||| |||| ||||||||||||||| |||||||    
T  22075061 tatgttgttgttatatttttataagatgatgaatatgttgttg 22075103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 22420654 - 22420596
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaata 85  Q
    |||||||| ||||| ||||||||||| |||||| ||||||| | |||||||||||||||    
T  22420654 ttatattattataagatgatgaatatattgttgcttatgttattataagatgatgaata 22420596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 2076524 - 2076483
Alignment:
Q  51 tatgttgttgttatgttttcataagatgatgaatacgttgtt 92  Q
    |||||||||||||| |||| ||||||||||||||| ||||||    
T  2076524 tatgttgttgttatatttttataagatgatgaatatgttgtt 2076483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 2076640 - 2076599
Alignment:
Q  51 tatgttgttgttatgttttcataagatgatgaatacgttgtt 92  Q
    |||||||||||||| |||| ||||||||||||||| ||||||    
T  2076640 tatgttgttgttatatttttataagatgatgaatatgttgtt 2076599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 8242785 - 8242744
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  8242785 tgttgttatattaatacaagaagatgaatatgttgttgttat 8242744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 11565773 - 11565732
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  11565773 tgttgttatattaatacaagaagatgaatatgttgttgttat 11565732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 12620037 - 12620078
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  12620037 tgttgttatattaatacaagaagatgaatatgttgttgttat 12620078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 16759197 - 16759140
Alignment:
Q  8 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||| |||||| |||||||  ||||| ||||||||||||||||| ||||    
T  16759197 tttggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttattat 16759140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 18913373 - 18913332
Alignment:
Q  44 tgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||||||||||| || | |||||||||||||||    
T  18913373 tgatgaatatgttgttgttatattattataagatgatgaata 18913332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 18953244 - 18953285
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||||||||| | |||||||||||| |||||||    
T  18953244 tgttgttatattaatataagaagatgaatatgttattgttat 18953285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 18953356 - 18953393
Alignment:
Q  25 ttgttatattaatataaaatgatgaatatgttgttgtt 62  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  18953356 ttgttatattattataaaatgatgaatatgtcgttgtt 18953393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 22948028 - 22947987
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  22948028 tgttgttatattaatacaagaagatgaatatgttgttgttat 22947987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 22951984 - 22951943
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  22951984 tgttgttatattaatacaagaagatgaatatgttgttgttat 22951943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 23870472 - 23870431
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  23870472 tgttgttatattaatacaagaagatgaatatgttgttgttat 23870431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 23874428 - 23874387
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  23874428 tgttgttatattaatacaagaagatgaatatgttgttgttat 23874387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 23988871 - 23988830
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  23988871 tgttgttatattaatacaagaagatgaatatgttgttgttat 23988830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 28104480 - 28104533
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgat 80  Q
    |||||||| ||||| |||||||||||||||||| ||||||| | ||||||||||    
T  28104480 ttatattattataagatgatgaatatgttgttgcttatgttattataagatgat 28104533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 8242813 - 8242781
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  8242813 ttatattttcataagatgatgaatacgttgttg 8242781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 11565801 - 11565769
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  11565801 ttatattttcataagatgatgaatacgttgttg 11565769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 12620009 - 12620041
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  12620009 ttatattttcataagatgatgaatacgttgttg 12620041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 16623172 - 16623136
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  16623172 tgttgttatattattataaagtgatgaatatgttgtt 16623136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 22948056 - 22948024
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  22948056 ttatattttcataagatgatgaatacgttgttg 22948024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 22952012 - 22951980
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  22952012 ttatattttcataagatgatgaatacgttgttg 22951980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 23870500 - 23870468
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  23870500 ttatattttcataagatgatgaatacgttgttg 23870468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 23874456 - 23874424
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  23874456 ttatattttcataagatgatgaatacgttgttg 23874424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 23988899 - 23988867
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  23988899 ttatattttcataagatgatgaatacgttgttg 23988867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 27222920 - 27222876
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  27222920 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 27222876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 3e-42; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 20294668 - 20294558
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  20294668 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 20294569  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  20294568 ttaagtgtact 20294558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 199 - 305
Target Start/End: Original strand, 19474099 - 19474207
Alignment:
Q  199 tatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgtt 296  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||||    
T  19474099 tatgatgtagataattattattattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgtt 19474198  T
Q  297 aagtgtact 305  Q
    |||||||||    
T  19474199 aagtgtact 19474207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 15238044 - 15238152
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgtt 296  Q
    ||||||||||| |||||||||| || || |||| ||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||    
T  15238044 gttatgatgtatataattattattactattaagtgatgattatattgtgtagtttaagttattagtgatgatgattacatgatgttatctatgagttgtt 15238143  T
Q  297 aagtgtact 305  Q
    || ||||||    
T  15238144 aaatgtact 15238152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 40727326 - 40727434
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgtt 296  Q
    ||||||||||| |||||||||| || || |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  40727326 gttatgatgtatataattattattactattaagtgatgattatattgtgtagtttaagttattagtgatgatgattacatgaagatatctataagttgtt 40727425  T
Q  297 aagtgtact 305  Q
      |||||||    
T  40727426 tggtgtact 40727434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 305
Target Start/End: Original strand, 20912197 - 20912287
Alignment:
Q  215 attactattaataagagatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||| ||||| |||| |||||||||||||| | |||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||    
T  20912197 attattattattaagtgatgattatattgtattgtttaagttattagtgatgatgattacatgatgttatctatgagttgttaagtgtact 20912287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 22108152 - 22108222
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||    
T  22108152 tgttgttatattattataaaatgatgaatatgttgttgttatatttttataagatgatgaatatgttgttg 22108222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 10752010 - 10751939
Alignment:
Q  10 tggtgttagtacgtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatga 82  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| | || ||||||||||||    
T  10752010 tggtgttagtacgtgttgttatattaatataaaatgataaatatgttgttgttatatatt-ataagatgatga 10751939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 22108410 - 22108484
Alignment:
Q  231 gatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    ||||||| |||||||| |||||||||||||||||||||||||| |||| | ||||||||||||||||| ||||||    
T  22108410 gatgattctattgtgttgtttaagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 22108484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 22120552 - 22120626
Alignment:
Q  231 gatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    ||||||||||||||||  ||||| |||||||||||||||||||||||| | ||||||||||||||||| ||||||    
T  22120552 gatgattatattgtgttatttaatttattagtgatgatgattatatgatgttatctatgagttgttaaatgtact 22120626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 18354915 - 18354841
Alignment:
Q  233 tgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||| ||||||| ||||  |||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  18354915 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 18354841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 15237742 - 15237788
Alignment:
Q  46 atgaatatgttgttgttatgttttcataagatgatgaatacgttgtt 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  15237742 atgaatatgttgttgttatgttttcataagatgatgaatacgttgtt 15237788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 18355146 - 18355077
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||| |||| ||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||    
T  18355146 tgttgttaaattattataaaatgataaatatgttgttgttatatttt-ataagatgatgaatacgttgttg 18355077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 22120297 - 22120367
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||||||||||| |||||||||||||| |||  ||||||||||||||| |||||||    
T  22120297 tgttgttatattattataaaatgatgagtatgttgttgttatatttctataagatgatgaatatgttgttg 22120367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 252 - 304
Target Start/End: Original strand, 24768544 - 24768596
Alignment:
Q  252 aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtac 304  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  24768544 aagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtac 24768596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 5889804 - 5889874
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||| |||||||||||| ||||||||| || | ||||||||||||||| |||||||    
T  5889804 tgttgttatattattataagatgatgaatatgatgttgttatattattataagatgatgaatatgttgttg 5889874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 15237855 - 15237901
Alignment:
Q  46 atgaatatgttgttgttatgttttcataagatgatgaatacgttgtt 92  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  15237855 atgaatatgttgtcgttatgttttcataagatgatgaatacgttgtt 15237901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 20912118 - 20912176
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatg 81  Q
    ||||||||||||||||||| | |||||||||||||||||||| || | |||||||||||    
T  20912118 tgttgttatattaatataagaagatgaatatgttgttgttatattattataagatgatg 20912176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 22108185 - 22108254
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgtt 92  Q
    ||||||||||||  ||||| |||||||||||||||||||||| || | |||| |||||||||| ||||||    
T  22108185 tgttgttatatttttataagatgatgaatatgttgttgttatattattataaaatgatgaatatgttgtt 22108254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 22120330 - 22120399
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgtt 92  Q
    ||||||||||||  ||||| |||||||||||||||||||||| || | |||| |||||||||| ||||||    
T  22120330 tgttgttatatttctataagatgatgaatatgttgttgttatattattataaaatgatgaatatgttgtt 22120399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 5889837 - 5889910
Alignment:
Q  23 tgttgttatattaatataaaatgatgaata---tgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||| ||||||||||   |||||||||||| || | ||||||||||||||| |||||||    
T  5889837 tgttgttatattattataagatgatgaatatgttgttgttgttatattattataagatgatgaatatgttgttg 5889910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 276
Target Start/End: Original strand, 22120499 - 22120562
Alignment:
Q  214 tattactattaataagagatgattatattgtgtagtttaagttatta-gtgatgatgattatat 276  Q
    ||||| ||||| |||| ||||||||||||||||||| |||||||||| | ||||||||||||||    
T  22120499 tattattattattaagtgatgattatattgtgtagtctaagttattatgagatgatgattatat 22120562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 35852348 - 35852282
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||| ||||| |||||||||||||||||| ||||||  | |||||||||| ||||||||||||    
T  35852348 ttatattattataagatgatgaatatgttgttgcttatgtcattataagatgattaatacgttgttg 35852282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 5889873 - 5889914
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  5889873 tgttgttatattattataagatgatgaatatgttgttgttat 5889914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 18355081 - 18355040
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  18355081 tgttgttatattaatataagaagatgaatatgttgttgttat 18355040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 24768264 - 24768305
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  24768264 tgttgttatattaatataagaagatgaatatgttgttgttat 24768305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 18355182 - 18355143
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgtt 62  Q
    |||| |||||||| ||||||||||||||||||||||||||    
T  18355182 tgtttttatattattataaaatgatgaatatgttgttgtt 18355143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 21742240 - 21742311
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgtt-atgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||| |||||||||||||||||||| || |  | || |||||||||||| |||||||    
T  21742240 tgttgttatattattataagatgatgaatatgttgttgtttatatgattatgagatgatgaatatgttgttg 21742311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 40727067 - 40727122
Alignment:
Q  8 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgtt 62  Q
    ||||||||||||| |||||| |||||||  ||||| ||||||||||||||||||||    
T  40727067 tttggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttgtt 40727122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 41862112 - 41862167
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatga 82  Q
    |||||||| ||||| |||||||||||||||||| ||||||| | ||||||||||||    
T  41862112 ttatattattataagatgatgaatatgttgttgcttatgttattataagatgatga 41862167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 30139048 - 30139114
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||| ||||| |||||||||||||||||| ||||||  | |||||||||||| || |||||||    
T  30139048 ttatattattataagatgatgaatatgttgttgcttatgtcattataagatgatgattatgttgttg 30139114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 18355232 - 18355179
Alignment:
Q  10 tggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgtt 62  Q
    ||||||||||| |||||| |||||||  ||||| ||||||||||||||||||||    
T  18355232 tggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttgtt 18355179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 19473879 - 19473920
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  19473879 tgttgttatattaatacaagaagatgaatatgttgttgttat 19473920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 20294812 - 20294771
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  20294812 tgttgttatattaatacaagaagatgaatatgttgttgttat 20294771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 272
Target Start/End: Original strand, 22108355 - 22108416
Alignment:
Q  212 attattactattaataagagatgattatattgtgtagtttaagttatta-gtgatgatgatt 272  Q
    ||||||| ||||| |||| |||||||||||||||| || |||||||||| | ||||||||||    
T  22108355 attattattattattaagtgatgattatattgtgtggtctaagttattatgagatgatgatt 22108416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 19473851 - 19473883
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  19473851 ttatattttcataagatgatgaatacgttgttg 19473883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 19510550 - 19510506
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  19510550 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 19510506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 20294840 - 20294808
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  20294840 ttatattttcataagatgatgaatacgttgttg 20294808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 22339100 - 22339056
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  22339100 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 22339056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 23113393 - 23113437
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  23113393 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 23113437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 24212033 - 24211985
Alignment:
Q  46 atgaatatgttgttg-ttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||||| ||||||| | ||||||||||||||| |||||||    
T  24212033 atgaatatgttgttgcttatgttattataagatgatgaatatgttgttg 24211985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 28372072 - 28372116
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  28372072 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 28372116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 37599999 - 37600043
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  37599999 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 37600043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 38146409 - 38146453
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  38146409 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 38146453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 39244740 - 39244704
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  39244740 tgttgttatatcaatataagatgatgaatatgttgtt 39244704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 41878642 - 41878686
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  41878642 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 41878686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 3e-42; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 9555223 - 9555113
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  9555223 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 9555124  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  9555123 ttaagtgtact 9555113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 14758916 - 14759026
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  14758916 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 14759015  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  14759016 ttaagtgtact 14759026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 14955684 - 14955794
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  14955684 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 14955783  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  14955784 ttaagtgtact 14955794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 17807208 - 17807098
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  17807208 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 17807109  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  17807108 ttaagtgtact 17807098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 4562698 - 4562808
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  4562698 gttatgatgtagataattattactattaataagagatgattatattgggttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 4562797  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  4562798 ttaagtgtact 4562808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 5758380 - 5758490
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  5758380 gttatgatgtagataattattactattaataagagatgattctattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 5758479  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  5758480 ttaagtgtact 5758490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 25688596 - 25688486
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  25688596 gttatgatgtatataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 25688497  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  25688496 ttaagtgtact 25688486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 33740990 - 33740880
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  || ||||||||||||||||||| |||| |||||||||||||||    
T  33740990 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaaattattagtgatgatgattacatgatgatatctatgagttg 33740891  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  33740890 ttaagtgtact 33740880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 12486422 - 12486315
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||   ||||||||| |||| |||||||||||||||    
T  12486422 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattag---tgatgattacatgatgatatctatgagttg 12486326  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  12486325 ttaagtgtact 12486315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 198 - 305
Target Start/End: Complemental strand, 27532900 - 27532796
Alignment:
Q  198 ttatgatgtagataattattactattaataagagatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgtta 297  Q
    |||||||||| |||||||||| ||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||| | |||||| |||||||||    
T  27532900 ttatgatgtatataattattattattaa---gtgatgattatattgtgtagtttaagttattagtgatgatgattacatgatgttatctaggagttgtta 27532804  T
Q  298 agtgtact 305  Q
    | ||||||    
T  27532803 aatgtact 27532796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 305
Target Start/End: Original strand, 23996911 - 23997001
Alignment:
Q  215 attactattaataagagatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||| ||||| |||| |||||||||||||||| |||||||||||||||||||||||||| |||| | ||||||||||||||||| ||||||    
T  23996911 attattattattaagtgatgattatattgtgttgtttaagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 23997001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 305
Target Start/End: Original strand, 631692 - 631782
Alignment:
Q  215 attactattaataagagatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||| ||||| |||| || ||||||||||||| |||||||||||||||||||||||||| |||| | ||||||||||||||||| ||||||    
T  631692 attattattattaagtgacgattatattgtgttgtttaagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 631782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 231 - 305
Target Start/End: Complemental strand, 12423061 - 12422987
Alignment:
Q  231 gatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||| | ||||||||||||||||| ||||||    
T  12423061 gatgattatattgtgttgtttaagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 12422987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 17052406 - 17052480
Alignment:
Q  231 gatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||| | ||||||||||||||||| ||||||    
T  17052406 gatgattatattgtgttgtttaagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 17052480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 305
Target Start/End: Original strand, 22634871 - 22634961
Alignment:
Q  215 attactattaataagagatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||| ||||| |||| |||||| ||||||||| |||||||||||||||||||||||||| |||| | ||||||||||||||||| ||||||    
T  22634871 attattattattaagtgatgatcatattgtgttgtttaagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 22634961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 15223739 - 15223685
Alignment:
Q  10 tggtgttagtacgtgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15223739 tggtgttagtacgtgttgttatattaatataaaatgataaatatgttgttgttat 15223685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 15223973 - 15223926
Alignment:
Q  46 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15223973 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 15223926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 20158408 - 20158482
Alignment:
Q  233 tgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||| ||||||| ||||  |||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  20158408 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 20158482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 15189796 - 15189726
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||| |||||||||||||||||||||| || | ||||||||||||||| |||||||    
T  15189796 tgttgttatattattataagatgatgaatatgttgttgttatattattataagatgatgaataagttgttg 15189726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 15189829 - 15189759
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||| |||||||||||||||||||||| || | ||||||||||||||| |||||||    
T  15189829 tgttgttatattattataagatgatgaatatgttgttgttatattattataagatgatgaatatgttgttg 15189759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 20161084 - 20161158
Alignment:
Q  233 tgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||| ||||||| ||||  |||||||||||||||| ||||| |||| ||||||||||||||||||||||||||    
T  20161084 tgattacattgtgttgttttaaagttattagtgatgacgattacatgatgatatctatgagttgttaagtgtact 20161158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 20163859 - 20163933
Alignment:
Q  233 tgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||| ||||||| ||||  |||||||||||||||| ||||| |||| ||||||||||||||||||||||||||    
T  20163859 tgattacattgtgttgttttaaagttattagtgatgacgattacatgatgatatctatgagttgttaagtgtact 20163933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 17994952 - 17995018
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||| |||||||||||||||||||||||| ||||||| | ||||||||||||||| |||||||    
T  17994952 ttatattattataaaatgatgaatatgttgttgcttatgttattataagatgatgaatatgttgttg 17995018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 27533010 - 27532963
Alignment:
Q  46 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  27533010 atgaatacgttgttgttatattttcataagatgatgaatacgttgttg 27532963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 12423247 - 12423189
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatg 81  Q
    ||||||||||||| |||||||||||||||||||||||||||| || | |||||| ||||    
T  12423247 tgttgttatattattataaaatgatgaatatgttgttgttatattattataagacgatg 12423189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 17048969 - 17049027
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatg 81  Q
    ||||||||||||| |||||||||||||| ||||||||||||| || | |||||||||||    
T  17048969 tgttgttatattattataaaatgatgaacatgttgttgttatattattataagatgatg 17049027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 631582 - 631647
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||| |||||||||||||||||||||||||||| || | |||| | |||||||| |||||||    
T  631582 ttatattattataaaatgatgaatatgttgttgttatattattataaaaagatgaatatgttgttg 631647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 10711943 - 10711869
Alignment:
Q  233 tgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||| ||||||| ||||  |||||||||||||||||||||| |||| | |||||| |||||||||| ||||||    
T  10711943 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtact 10711869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 10925713 - 10925639
Alignment:
Q  233 tgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||| ||||||| ||||  |||||||||||||||||||||| |||| | |||||| |||||||||| ||||||    
T  10925713 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtact 10925639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 15481979 - 15482042
Alignment:
Q  22 gtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||||  || | |||||||||||||||||||||| || | |||||||||||||||    
T  15481979 gtgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatgaata 15482042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 19857067 - 19857004
Alignment:
Q  22 gtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||||  || | |||||||||||||||||||||| || | |||||||||||||||    
T  19857067 gtgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatgaata 19857004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 15876937 - 15876871
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||| ||||| || ||||||||||||||| ||||||| | ||||||||||||||| |||||||    
T  15876937 ttatattattataagattatgaatatgttgttgcttatgttattataagatgatgaatatgttgttg 15876871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 23996777 - 23996813
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||||| |||||||||||||||||||||||    
T  23996777 tgttgttatattattataaaatgatgaatatgttgtt 23996813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 361609 - 361546
Alignment:
Q  22 gtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||||  || | ||||||||||||||| |||||| || | |||||||||||||||    
T  361609 gtgttgttatattatgatgagatgatgaatatgttgctgttatattattataagatgatgaata 361546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 631610 - 631649
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgtt 62  Q
    ||||||||||||| ||||||| ||||||||||||||||||    
T  631610 tgttgttatattattataaaaagatgaatatgttgttgtt 631649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 305
Target Start/End: Original strand, 13813820 - 13813867
Alignment:
Q  258 ttagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||||| |||| | ||||||||||||||||| ||||||    
T  13813820 ttagtgatgatgattacatgatgttatctatgagttgttaaatgtact 13813867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 305
Target Start/End: Original strand, 13818308 - 13818355
Alignment:
Q  258 ttagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||||| |||| | ||||||||||||||||| ||||||    
T  13818308 ttagtgatgatgattacatgatgttatctatgagttgttaaatgtact 13818355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 15481914 - 15481977
Alignment:
Q  22 gtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||||  || | |||||||||||||||||||||| || | |||||||||| ||||    
T  15481914 gtgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgataaata 15481977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 5757956 - 5758042
Alignment:
Q  8 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| |||||| |||||||   |||| |||||||||||||||||||||| ||   | |||| |||||||| |||||||    
T  5757956 tttggtgttagtatgtgttgattatattttcataagatgatgaatatgttgttgttatattaatacaagaagatgaatatgttgttg 5758042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 15481948 - 15482017
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||| ||||| |||||| ||||||||| || | || |||||||||||| |||||||    
T  15481948 tgttgttatattattataagatgataaatatg-tgttgttatattatgatgagatgatgaatatgttgttg 15482017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 15482013 - 15482074
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||| ||||| |||||||||||| ||||||| | || | |||||||||||||||    
T  15482013 tgttgttatattattataagatgatgaatatg-tgttgttgtattattataagatgatgaata 15482074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 15876903 - 15876837
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||| ||||| |||||||||||||||||| ||||||  | |||||||||| ||||||||||||    
T  15876903 ttatgttattataagatgatgaatatgttgttgcttatgtcattataagatgattaatacgttgttg 15876837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 22634792 - 22634850
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatg 81  Q
    ||||||||||||| ||||  |||||||||||||||||||||| || | || ||||||||    
T  22634792 tgttgttatattattatatgatgatgaatatgttgttgttatattattatgagatgatg 22634850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 4562480 - 4562521
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  4562480 tgttgttatattaatacaagaagatgaatatgttgttgttat 4562521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 5758005 - 5758046
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  5758005 tgttgttatattaatacaagaagatgaatatgttgttgttat 5758046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 9555441 - 9555400
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  9555441 tgttgttatattaatacaagaagatgaatatgttgttgttat 9555400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 14758621 - 14758662
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  14758621 tgttgttatattaatacaagaagatgaatatgttgttgttat 14758662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 14955386 - 14955427
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  14955386 tgttgttatattaatacaagaagatgaatatgttgttgttat 14955427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 21102945 - 21102994
Alignment:
Q  44 tgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgtt 92  Q
    ||||||||||||||||| ||||||| | ||||||||||||||| ||||||    
T  21102945 tgatgaatatgttgttgcttatgttattataagatgatgaatatgttgtt 21102994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 25688814 - 25688773
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  25688814 tgttgttatattaatacaagaagatgaatatgttgttgttat 25688773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 33741211 - 33741170
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  33741211 tgttgttatattaatacaagaagatgaatatgttgttgttat 33741170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 4562452 - 4562484
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  4562452 ttatattttcataagatgatgaatacgttgttg 4562484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 7641721 - 7641757
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  7641721 tgttgttatatcaatataagatgatgaatatgttgtt 7641757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 9555469 - 9555437
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  9555469 ttatattttcataagatgatgaatacgttgttg 9555437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 14758593 - 14758625
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  14758593 ttatattttcataagatgatgaatacgttgttg 14758625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 14955358 - 14955390
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  14955358 ttatattttcataagatgatgaatacgttgttg 14955390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 15355861 - 15355897
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  15355861 tgttgttatatcaatataagatgatgaatatgttgtt 15355897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 15533307 - 15533263
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  15533307 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 15533263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 18211692 - 18211648
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  18211692 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 18211648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 24048375 - 24048419
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    ||||||||||||| |||| | ||||||||||||||||| ||||||    
T  24048375 gtgatgatgattacatgatgttatctatgagttgttaaatgtact 24048419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 25688842 - 25688810
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  25688842 ttatattttcataagatgatgaatacgttgttg 25688810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 33741239 - 33741207
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  33741239 ttatattttcataagatgatgaatacgttgttg 33741207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 49549073 - 49549117
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  49549073 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 49549117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 3e-42; HSPs: 107)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 7108392 - 7108282
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  7108392 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 7108293  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  7108292 ttaagtgtact 7108282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 7112327 - 7112217
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  7112327 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 7112228  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  7112227 ttaagtgtact 7112217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 11068767 - 11068657
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  11068767 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 11068668  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  11068667 ttaagtgtact 11068657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 22320283 - 22320173
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  22320283 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 22320184  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  22320183 ttaagtgtact 22320173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 22335338 - 22335228
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  22335338 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 22335239  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  22335238 ttaagtgtact 22335228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 55021530 - 55021420
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  55021530 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 55021431  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  55021430 ttaagtgtact 55021420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 11167018 - 11167128
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  11167018 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 11167117  T
Q  295 ttaagtgtact 305  Q
    |||||| ||||    
T  11167118 ttaagtttact 11167128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 14498101 - 14497991
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| ||||||||||| |||| |||||||||||||||    
T  14498101 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagcgatgatgattacatgatgatatctatgagttg 14498002  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  14498001 ttaagtgtact 14497991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 28948615 - 28948505
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| ||||||||| |||||    
T  28948615 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctataagttg 28948516  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  28948515 ttaagtgtact 28948505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 199 - 305
Target Start/End: Complemental strand, 15616329 - 15616221
Alignment:
Q  199 tatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgtt 296  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||||    
T  15616329 tatgatgtagataattattactattaataagagatgattataatgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgtt 15616230  T
Q  297 aagtgtact 305  Q
    |||||||||    
T  15616229 aagtgtact 15616221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 30064540 - 30064429
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgt---gtagtttaagttattagtgatgatgattatatgaagatatctatgagtt 293  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |   ||||||||||||||||||||||||||||| |||| | ||||||||||||    
T  30064540 gttatgatgtagataattactactattaataagagatgattatattatattgtagtttaagttattagtgatgatgattacatgatgttatctatgagtt 30064441  T
Q  294 gttaagtgtact 305  Q
    ||||||||||||    
T  30064440 gttaagtgtact 30064429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 4590087 - 4590195
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgtt 296  Q
    ||||||||||| |||||||||| ||||| |||| || |||||||||||||||||||||||||||||||||||||||| |||| | |||||| ||||||||    
T  4590087 gttatgatgtatataattattattattattaagtgacgattatattgtgtagtttaagttattagtgatgatgattacatgatgttatctaggagttgtt 4590186  T
Q  297 aagtgtact 305  Q
    || ||||||    
T  4590187 aaatgtact 4590195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 4112573 - 4112649
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  4112573 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgat 4112649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 305
Target Start/End: Original strand, 17318454 - 17318544
Alignment:
Q  215 attactattaataagagatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||| ||||| |||| |||||||||||||||||||||||||||||||||||||||| || |||||| |||||| |||||||||| ||||||    
T  17318454 attattattattaagtgatgattatattgtgtagtttaagttattagtgatgatgaatacatgaagttatctaggagttgttaaatgtact 17318544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 4108724 - 4108800
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgat 271  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||  ||||||||||||||||||||    
T  4108724 gttatgatgtagataattattactattaataagaaatgattatattgtgttgttttaaagttattagtgatgatgat 4108800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 197 - 273
Target Start/End: Original strand, 8490318 - 8490394
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagtttaagttattagtgatgatgatta 273  Q
    ||||||||||| |||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||| ||||||    
T  8490318 gttatgatgtatataattattattattattaagtgatgattatattgtgtagtttaagttattagtgatggtgatta 8490394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 212 - 303
Target Start/End: Original strand, 14068004 - 14068095
Alignment:
Q  212 attattactattaataagagatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgta 303  Q
    ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||| | |||||| |||||| ||| ||||    
T  14068004 attattattattattaagtgatgattatattgtgtagtttaagttattagtgatgatgattacatgatgttatctaggagttgctaaatgta 14068095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 231 - 305
Target Start/End: Complemental strand, 16795621 - 16795547
Alignment:
Q  231 gatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||| | ||||||||||||||||| ||||||    
T  16795621 gatgattatattgtgttgtttaagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 16795547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 16751788 - 16751842
Alignment:
Q  10 tggtgttagtacgtgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16751788 tggtgttagtacgtgttgttatattaatataaaatgataaatatgttgttgttat 16751842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 232 - 305
Target Start/End: Original strand, 12853325 - 12853398
Alignment:
Q  232 atgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    ||||||||||||||| |||||| ||||||||||||||||||| |||| | ||||||||||||||||| ||||||    
T  12853325 atgattatattgtgttgtttaatttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 12853398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 244 - 305
Target Start/End: Original strand, 18933329 - 18933390
Alignment:
Q  244 tgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||    
T  18933329 tgtagtttaagttattagtgatgatgattacatgatgttatctatgagttgttaagtgtact 18933390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 14067674 - 14067758
Alignment:
Q  10 tggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||| |||| |||||| ||||||| |||||| |||||||||| ||||||||||| |||| |||||||||||||||||||||||    
T  14067674 tggtgtcagtatgtgttgattatatttatataagatgatgaatacgttgttgttatatttttataagatgatgaatacgttgttg 14067758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 5219965 - 5219891
Alignment:
Q  233 tgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||| ||||||| ||||  |||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  5219965 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 5219891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 11853824 - 11853750
Alignment:
Q  233 tgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||| ||||||| ||||  |||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  11853824 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 11853750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 16751555 - 16751602
Alignment:
Q  46 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16751555 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 16751602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 19774609 - 19774562
Alignment:
Q  46 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19774609 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 19774562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 37440641 - 37440715
Alignment:
Q  233 tgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||| ||||||| ||||  |||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  37440641 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 37440715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 15464025 - 15463922
Alignment:
Q  201 tgatgtagataattattactattaataagagatgattatattgtgtagtttaagttattagtga-tgatgattatatgaagatatctatgagttgttaag 299  Q
    ||||||| |||||||||| ||||||  || |||||||||||||||| ||||||||||||||||| ||||||||| | || | ||| |||||||||||||     
T  15464025 tgatgtatataattattattattaa--agtgatgattatattgtgttgtttaagttattagtgattgatgattacaggatgttatatatgagttgttaaa 15463928  T
Q  300 tgtact 305  Q
    ||||||    
T  15463927 tgtact 15463922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 18440570 - 18440640
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||| |||||||||||||||||||||| || | ||||||||||||||| |||||||    
T  18440570 tgttgttatattattataagatgatgaatatgttgttgttatattattataagatgatgaataagttgttg 18440640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 19485644 - 19485714
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||| |||||||||||||||||||||| || | ||||||||||||||| |||||||    
T  19485644 tgttgttatattattataagatgatgaatatgttgttgttatattattataagatgatgaataagttgttg 19485714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 19774391 - 19774311
Alignment:
Q  10 tggtgttagtacgtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgt 91  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| || ||| | || |||||||||||| || |||||    
T  19774391 tggtgttagtacgtgttgttatattaatataaaatgataaatatgttgctgatatatatt-ataagatgatgattatgttgt 19774311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 11301626 - 11301700
Alignment:
Q  233 tgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||| ||||||| ||||  |||||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  11301626 tgattacattgtgttgttttaaagttattagtgatgatgattgcatgatgatatctatgagttgttaagtgtact 11301700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 14664543 - 14664469
Alignment:
Q  233 tgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||| ||||||| ||||  |||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  14664543 tgattacattgtgttgttttaaagttattagtgatgatgattacataatgatatctatgagttgttaagtgtact 14664469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 14667707 - 14667633
Alignment:
Q  233 tgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||| ||||||| ||||  |||||||||||||||||||||| |||| || |||||||||||||||||||||||    
T  14667707 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgagatctatgagttgttaagtgtact 14667633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 305
Target Start/End: Complemental strand, 14670141 - 14670070
Alignment:
Q  231 gatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||||| |||||||||||||||||   |||||| |||| | ||||||||||||||||| ||||||    
T  14670141 gatgattatattgtgttgtttaagttattagtga---tgattacatgatgttatctatgagttgttaaatgtact 14670070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 4589868 - 4589915
Alignment:
Q  46 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||    
T  4589868 atgaatatgttgttgtgatattttcataagatgatgaatacgttgttg 4589915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 49390322 - 49390385
Alignment:
Q  30 atattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||| ||||| |||||||||||||||||||||| || | ||||||||||||||| |||||||    
T  49390322 atattattataagatgatgaatatgttgttgttatattattataagatgatgaatatgttgttg 49390385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 12338911 - 12338841
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||   |||| | |||||||||||||||||||| ||||||||||| |||||||| |||||||    
T  12338911 tgttgttatattttcataagaagatgaatatgttgttgttatattttcataagaagatgaatatgttgttg 12338841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 18440492 - 18440554
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||| ||||| |||||||||||||||||| ||| || | |||||||||||||||    
T  18440492 tgttgttatattattataagatgatgaatatgttgttgctatattattataagatgatgaata 18440554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 19485566 - 19485628
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||| ||||| |||||||||||||||||| ||| || | |||||||||||||||    
T  19485566 tgttgttatattattataagatgatgaatatgttgttgctatattattataagatgatgaata 19485628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 12853062 - 12853103
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  12853062 tgttgttatattattataaaatgatgaatatgttgttgttat 12853103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 8490215 - 8490254
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgtt 62  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  8490215 tgttgttatattattataaaatgatgaatatgttgttgtt 8490254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 16795739 - 16795684
Alignment:
Q  26 tgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatg 81  Q
    |||||||||| ||||||||||||||||||| |||||||| || | |||||||||||    
T  16795739 tgttatattattataaaatgatgaatatgtggttgttatattattataagatgatg 16795684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 12338920 - 12338874
Alignment:
Q  47 tgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||||||||||||| ||||||||||| |||||||| |||||||    
T  12338920 tgaatatgttgttgttatattttcataagaagatgaatatgttgttg 12338874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 14667958 - 14667888
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||  ||||| |||||||||||||||||||||| ||   |||||| |||||||| |||||||    
T  14667958 tgttgttatatttttataagatgatgaatatgttgttgttatattaatataagaagatgaatatgttgttg 14667888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 11301411 - 11301452
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  11301411 tgttgttatattaatataagaagatgaatatgttgttgttat 11301452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 14667925 - 14667884
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  14667925 tgttgttatattaatataagaagatgaatatgttgttgttat 14667884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 268
Target Start/End: Complemental strand, 14681663 - 14681626
Alignment:
Q  231 gatgattatattgtgtagtttaagttattagtgatgat 268  Q
    |||||||||||||||| |||||||||||||||||||||    
T  14681663 gatgattatattgtgttgtttaagttattagtgatgat 14681626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 27410961 - 27411002
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  27410961 tgttgttatattaatataagaagatgaatatgttgttgttat 27411002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 8490251 - 8490287
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||||| |||||||||||||||||||||||    
T  8490251 tgttgttatattattataaaatgatgaatatgttgtt 8490287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 305
Target Start/End: Complemental strand, 12337348 - 12337300
Alignment:
Q  255 ttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    ||||||||||||||||||| |||| ||||  ||||||||||||||||||||    
T  12337348 ttattagtgatgatgattacatgatgata--tatgagttgttaagtgtact 12337300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 14067919 - 14067958
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgtt 62  Q
    ||||||||||||| ||||||||||||| ||||||||||||    
T  14067919 tgttgttatattattataaaatgatgactatgttgttgtt 14067958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 14664759 - 14664720
Alignment:
Q  25 ttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||||||| | ||||||||||||||||||||    
T  14664759 ttgttatattaatataagaagatgaatatgttgttgttat 14664720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 17318336 - 17318409
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgtt---gttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| |||||||||| |||||||||   |||||||| || | |||| |||||||||| |||||||    
T  17318336 tgttgttatattattataaaatgacgaatatgttgttgttgttatattattataatatgatgaatatgttgttg 17318409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 17318372 - 17318411
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgtt 62  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  17318372 tgttgttatattattataatatgatgaatatgttgttgtt 17318411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 1466061 - 1466099
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgt 61  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  1466061 tgttgttatattattataagatgatgaatatgttgttgt 1466099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 1466102 - 1466140
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgt 61  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  1466102 tgttgttatattattataagatgatgaatatgttgttgt 1466140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 64
Target Start/End: Original strand, 4590027 - 4590061
Alignment:
Q  30 atattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||| ||||||||||||||||||||||||||||    
T  4590027 atattattataaaatgatgaatatgttgttgttat 4590061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 12853049 - 12853099
Alignment:
Q  43 atgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||||||||||||||||| || | |||| |||||||||| |||||||    
T  12853049 atgatgaatatgttgttgttatattattataaaatgatgaatatgttgttg 12853099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 14498319 - 14498269
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcata 73  Q
    |||||||||||||||| || | |||||||||||||||||||| || |||||    
T  14498319 tgttgttatattaatacaagaagatgaatatgttgttgttatattatcata 14498269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 14664799 - 14664761
Alignment:
Q  51 tatgttgttgttatgttttcataagatgatgaatacgtt 89  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  14664799 tatgttgttgttatatttttataagatgatgaatacgtt 14664761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 93
Target Start/End: Complemental strand, 14667963 - 14667921
Alignment:
Q  51 tatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||||||||| |||| ||||||||||||||| |||||||    
T  14667963 tatgttgttgttatatttttataagatgatgaatatgttgttg 14667921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 14965709 - 14965643
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgtt-gttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||| ||||| |||||||||||||||||  ||||||| | |||||||||||| || |||||||    
T  14965709 ttatattattataagatgatgaatatgttgttccttatgttattataagatgatgattatgttgttg 14965643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 16613582 - 16613516
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||| |||||  ||||||||||||||||| ||||||| | |||||||||||| || |||||||    
T  16613582 ttatattattataagctgatgaatatgttgttgcttatgttattataagatgatgattatgttgttg 16613516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 22045671 - 22045737
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||| |||||  ||||||||||||||||| ||||||| | |||||||||||| || |||||||    
T  22045671 ttatattattataagctgatgaatatgttgttgcttatgttattataagatgatgattatgttgttg 22045737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 49390348 - 49390386
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgt 61  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  49390348 tgttgttatattattataagatgatgaatatgttgttgt 49390386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 4108385 - 4108442
Alignment:
Q  8 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||| |||||| |||||||  ||||| ||||||||||||||||| ||||    
T  4108385 tttggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttattat 4108442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 4112237 - 4112294
Alignment:
Q  8 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||| |||||| |||||||  ||||| ||||||||||||||||| ||||    
T  4112237 tttggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttattat 4112294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 7108610 - 7108569
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  7108610 tgttgttatattaatacaagaagatgaatatgttgttgttat 7108569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 7112545 - 7112504
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  7112545 tgttgttatattaatacaagaagatgaatatgttgttgttat 7112504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 11069062 - 11069021
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  11069062 tgttgttatattaatacaagaagatgaatatgttgttgttat 11069021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 11166723 - 11166764
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  11166723 tgttgttatattaatacaagaggatgaatatgttgttgttat 11166764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 11914694 - 11914759
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgtt 92  Q
    |||| ||| ||||| ||| |||||||||||||| ||||||| | ||||||||||||||| ||||||    
T  11914694 ttatgttattataagatggtgaatatgttgttgcttatgttattataagatgatgaatatgttgtt 11914759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 15616549 - 15616508
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  15616549 tgttgttatattaatacaagaagatgaatatgttgttgttat 15616508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 16795778 - 16795741
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttg 60  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  16795778 tgttgttatattattataaaatgatgaatatcttgttg 16795741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 22320578 - 22320537
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  22320578 tgttgttatattaatacaagaagatgaatatgttgttgttat 22320537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 22335633 - 22335592
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  22335633 tgttgttatattaatacaagaagatgaatatgttgttgttat 22335592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 24513385 - 24513320
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgtt 92  Q
    |||| ||| ||||| |||||||||||||||||  ||||||| | ||||||||||||||| ||||||    
T  24513385 ttatgttattataagatgatgaatatgttgtttcttatgttattataagatgatgaatatgttgtt 24513320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 24513403 - 24513354
Alignment:
Q  44 tgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgtt 92  Q
    ||||||||||||||||| ||||||| | ||||||||||||||| ||||||    
T  24513403 tgatgaatatgttgttgcttatgttattataagatgatgaatatgttgtt 24513354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 28948756 - 28948715
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  28948756 tgttgttatattaatacaagaagatgaatatgttgttgttat 28948715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 30064761 - 30064720
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  30064761 tgttgttatattaatacaagaagatgaatatgttgttgttat 30064720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 55021899 - 55021858
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  55021899 tgttgttatattaatacaagaagatgaatatgttgttgttat 55021858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 3802058 - 3802014
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  3802058 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 3802014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 6469694 - 6469730
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  6469694 tgttgttatatcaatataagatgatgaatatgttgtt 6469730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 7108638 - 7108606
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  7108638 ttatattttcataagatgatgaatacgttgttg 7108606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 7112573 - 7112541
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  7112573 ttatattttcataagatgatgaatacgttgttg 7112541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 11069090 - 11069058
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  11069090 ttatattttcataagatgatgaatacgttgttg 11069058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 11166695 - 11166727
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  11166695 ttatattttcataagatgatgaatacgttgttg 11166727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 12853095 - 12853131
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  12853095 tgttgttatattactattaaatgatgaatatgttgtt 12853131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 14498347 - 14498315
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  14498347 ttatattttcataagatgatgaatacgttgttg 14498315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 14764786 - 14764830
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  14764786 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 14764830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 15616577 - 15616545
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  15616577 ttatattttcataagatgatgaatacgttgttg 15616545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 15977102 - 15977066
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  15977102 tgttgttatatcaatataagatgatgaatatgttgtt 15977066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 16751598 - 16751634
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  16751598 tgttgttatattattataaagtgatgaatatgttgtt 16751634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 19774566 - 19774530
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  19774566 tgttgttatattattataaagtgatgaatatgttgtt 19774530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 20249840 - 20249884
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  20249840 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 20249884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 21618065 - 21618029
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  21618065 tgttgttatatcaatataagatgatgaatatgttgtt 21618029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 22320606 - 22320574
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  22320606 ttatattttcataagatgatgaatacgttgttg 22320574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 22335661 - 22335629
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  22335661 ttatattttcataagatgatgaatacgttgttg 22335629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 28849174 - 28849210
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  28849174 tgttgttatatcaatataagatgatgaatatgttgtt 28849210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 28948784 - 28948752
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  28948784 ttatattttcataagatgatgaatacgttgttg 28948752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 29545929 - 29545973
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  29545929 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 29545973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 30064789 - 30064757
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  30064789 ttatattttcataagatgatgaatacgttgttg 30064757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 36166171 - 36166135
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  36166171 tgttgttatatcaatataagatgatgaatatgttgtt 36166135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 45578386 - 45578422
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  45578386 tgttgttatatcaatataagatgatgaatatgttgtt 45578422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 54519685 - 54519641
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  54519685 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 54519641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 55021927 - 55021895
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  55021927 ttatattttcataagatgatgaatacgttgttg 55021895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 3e-42; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 24629972 - 24630082
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  24629972 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 24630071  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  24630072 ttaagtgtact 24630082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 24645305 - 24645195
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  24645305 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 24645206  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  24645205 ttaagtgtact 24645195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 24648081 - 24647971
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  24648081 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 24647982  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  24647981 ttaagtgtact 24647971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 27600525 - 27600415
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  27600525 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 27600426  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  27600425 ttaagtgtact 27600415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 30346582 - 30346692
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  30346582 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 30346681  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  30346682 ttaagtgtact 30346692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 27380918 - 27381028
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  27380918 gttatgatgtagataattattactattaataagagatgattatatggtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 27381017  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  27381018 ttaagtgtact 27381028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 27384888 - 27384998
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  27384888 gttatgatgtagataattattactattaataagagatgattatatggtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 27384987  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  27384988 ttaagtgtact 27384998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 10103221 - 10103331
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||  |||||||||||||||    
T  10103221 gttatgatgaagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgttgatatctatgagttg 10103320  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  10103321 ttaagtgtact 10103331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 12902531 - 12902641
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| || | |||||||||||||||    
T  12902531 gttatgatgtagataattattagtattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacataatgatatctatgagttg 12902630  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  12902631 ttaagtgtact 12902641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 31344035 - 31343961
Alignment:
Q  233 tgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||| ||||||| ||||  |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  31344035 tgattacattgtgttgttttaaagttattagtgatgatgattacatgaagatatctatgagttgttaggtgtact 31343961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 235 - 305
Target Start/End: Complemental strand, 9784108 - 9784038
Alignment:
Q  235 attatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||| |||||||||||||||||||||||||| |||| | ||||||||||||||| | ||||||    
T  9784108 attatattgtgttgtttaagttattagtgatgatgattacatgatgttatctatgagttgtttaatgtact 9784038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 20634480 - 20634546
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||| |||||||||||||||||||||||| ||||||| | ||||||||||||||| |||||||    
T  20634480 ttatattattataaaatgatgaatatgttgttgcttatgttattataagatgatgaatatgttgttg 20634546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 27472025 - 27471959
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||| ||||| |||||||||||||||||| ||||||| | |||||||||||| || |||||||    
T  27472025 ttatattattataatatgatgaatatgttgttgcttatgttattataagatgatgattatgttgttg 27471959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 93
Target Start/End: Original strand, 13102053 - 13102105
Alignment:
Q  42 aatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||||||||| ||||||| | ||||||||||||||| |||||||    
T  13102053 aatgatgaatatgttgttgcttatgttattataagatgatgaatatgttgttg 13102105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 274
Target Start/End: Original strand, 20319664 - 20319727
Alignment:
Q  212 attattactattaataagagatgattatattgtgtagtttaagttatta-gtgatgatgattat 274  Q
    ||||||| ||||| |||| ||| |||||||||||| ||||||||||||| | ||||||||||||    
T  20319664 attattattattattaagtgatcattatattgtgttgtttaagttattatgagatgatgattat 20319727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 34874793 - 34874848
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatga 82  Q
    |||||||| ||||| |||||||||||||||||| ||||||| | ||||||||||||    
T  34874793 ttatattattataagatgatgaatatgttgttgcttatgttattataagatgatga 34874848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 24629674 - 24629720
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgtttt 69  Q
    |||||||||||||||| || | |||||||||||||||||||| ||||    
T  24629674 tgttgttatattaatacaagaagatgaatatgttgttgttatatttt 24629720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 10103003 - 10103044
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  10103003 tgttgttatattaatacaagaagatgaatatgttgttgttat 10103044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 24648315 - 24648258
Alignment:
Q  8 tttggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||| |||||| |||||||   |||||| ||||||||||||||||||||    
T  24648315 tttggtgttagtatgtgttgattatattttcataaaaagatgaatatgttgttgttat 24648258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 27600743 - 27600702
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  27600743 tgttgttatattaatacaagaagatgaatatgttgttgttat 27600702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 30346210 - 30346251
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  30346210 tgttgttatattaatacaagaagatgaatatgttgttgttat 30346251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 6481872 - 6481828
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  6481872 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 6481828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 6485339 - 6485295
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  6485339 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 6485295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 10102975 - 10103007
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  10102975 ttatattttcataagatgatgaatacgttgttg 10103007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 19663548 - 19663592
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  19663548 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 19663592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 20260345 - 20260301
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  20260345 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 20260301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 24629646 - 24629678
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  24629646 ttatattttcataagatgatgaatacgttgttg 24629678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 27600771 - 27600739
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  27600771 ttatattttcataagatgatgaatacgttgttg 27600739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 28576729 - 28576693
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  28576729 tgttgttatatcaatataagatgatgaatatgttgtt 28576693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 30346182 - 30346214
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  30346182 ttatattttcataagatgatgaatacgttgttg 30346214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 45030404 - 45030440
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  45030404 tgttgttatatcaatataagatgatgaatatgttgtt 45030440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 3e-42; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 1009416 - 1009306
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  1009416 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 1009317  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  1009316 ttaagtgtact 1009306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 1926720 - 1926830
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  1926720 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 1926819  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  1926820 ttaagtgtact 1926830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 16376740 - 16376850
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  16376740 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 16376839  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  16376840 ttaagtgtact 16376850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 20925734 - 20925844
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  20925734 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 20925833  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  20925834 ttaagtgtact 20925844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 52634422 - 52634312
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  52634422 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 52634323  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  52634322 ttaagtgtact 52634312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 21406402 - 21406297
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgtt 296  Q
    ||||||||||| |||||||||| ||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||| | |||||| ||||||||    
T  21406402 gttatgatgtatataattattattattaa---gtgatgattatattgtgtagtttaagttattagtgatgatgattacatgatgttatctaggagttgtt 21406306  T
Q  297 aagtgtact 305  Q
    || ||||||    
T  21406305 aaatgtact 21406297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 22132059 - 22132133
Alignment:
Q  231 gatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||| | ||||||||||||||||| ||||||    
T  22132059 gatgattatattgtgttgtttaagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 22132133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 220 - 305
Target Start/End: Original strand, 20230090 - 20230173
Alignment:
Q  220 tattaataagagatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    ||||| |||| | ||||||||||||  ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||    
T  20230090 tattattaagtggtgattatattgt--agtttaagttattagtgatgatgattacatgatgttatctatgagttgttaagtgtact 20230173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 41389547 - 41389601
Alignment:
Q  10 tggtgttagtacgtgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41389547 tggtgttagtacgtgttgttatattaatataaaatgataaatatgttgttgttat 41389601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 39245099 - 39245170
Alignment:
Q  10 tggtgttagtacgtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatga 82  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||| | || ||||||||||||    
T  39245099 tggtgttagtacgtgttgttatattaatataaaatgatagatatgttgttgttatatatt-ataagatgatga 39245170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 39248654 - 39248725
Alignment:
Q  10 tggtgttagtacgtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatga 82  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||| | || ||||||||||||    
T  39248654 tggtgttagtacgtgttgttatattaatataaaatgatagatatgttgttgttatatatt-ataagatgatga 39248725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 33796151 - 33796077
Alignment:
Q  233 tgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||| ||||||| ||||  |||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  33796151 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 33796077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 39244866 - 39244913
Alignment:
Q  46 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39244866 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 39244913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 39248421 - 39248468
Alignment:
Q  46 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39248421 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 39248468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 41389314 - 41389361
Alignment:
Q  46 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41389314 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 41389361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 28195094 - 28195164
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||| |||||||||||||||||||||| || | ||||||||||||||| |||||||    
T  28195094 tgttgttatattattataagatgatgaatatgttgttgttatattattataagatgatgaataagttgttg 28195164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 33796382 - 33796313
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||||||||| ||||||| |||||||| |||| |||||||||||||||||||||||    
T  33796382 tgttgttatattattataaaatgataaatatgtcgttgttatatttt-ataagatgatgaatacgttgttg 33796313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 35982327 - 35982397
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||| |||||||||||||||||||||| || | ||||||||||||||| |||||||    
T  35982327 tgttgttatattattataagatgatgaatatgttgttgttatattattataagatgatgaatatgttgttg 35982397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 41801239 - 41801313
Alignment:
Q  231 gatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||||| |||||| ||||||||||||||||||| ||||   ||||||||||||||||| ||||||    
T  41801239 gatgattatattgtgttgtttaatttattagtgatgatgattacatgatattatctatgagttgttaaatgtact 41801313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 22131829 - 22131899
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| |||||||||||||| ||||||||||||| || | |||| |||||||||| |||||||    
T  22131829 tgttgttatattattataaaatgatgaacatgttgttgttatattattataaaatgatgaatatgttgttg 22131899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 41801080 - 41801142
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||  ||||| |||||||||||||||||||||| |||| |||||||||||||||    
T  41801080 tgttgttatatttttataagatgatgaatatgttgttgttatatttttataagatgatgaata 41801142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 20229926 - 20229973
Alignment:
Q  46 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  20229926 atgaatatgttattgttatattttcataagatgatgaatacgttgttg 20229973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 20229969 - 20230031
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||||||||| | |||||||||||||||||||| || | |||| ||||||||||    
T  20229969 tgttgttatattaatataagaagatgaatatgttgttgttatattattataaaatgatgaata 20230031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 22131898 - 22131956
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatg 81  Q
    ||||||||||||| ||||||||| |||||||||||||||||| || | |||||||||||    
T  22131898 tgttgttatattattataaaatggtgaatatgttgttgttatattattataagatgatg 22131956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 33796501 - 33796417
Alignment:
Q  10 tggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||| |||||| |||||||  ||||| |||||| ||||||||||||||| || | |||| |||||||||| |||||||    
T  33796501 tggtgttagtatgtgttgattatatttttataagatgatgtatatgttgttgttatattattataaaatgatgaatatgttgttg 33796417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 21406469 - 21406430
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgtt 62  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  21406469 tgttgttatattattataaaatgatgaatatgttgttgtt 21406430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 22131862 - 22131901
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgtt 62  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  22131862 tgttgttatattattataaaatgatgaatatgttgttgtt 22131901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 33796454 - 33796415
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgtt 62  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  33796454 tgttgttatattattataaaatgatgaatatgttgttgtt 33796415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 41306223 - 41306286
Alignment:
Q  22 gtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||||  || | |||||||||||||||||||||| || | |||||||||||||||    
T  41306223 gtgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatgaata 41306286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 20315668 - 20315606
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    |||||||||||||  || | |||||||||||||||||||||| || | |||||||||||||||    
T  20315668 tgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatgaata 20315606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 20315855 - 20315794
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||| ||||| |||||||||||| ||||||||| || | |||||||||||||||    
T  20315855 tgttgttatattattataagatgatgaatatg-tgttgttatattattataagatgatgaata 20315794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 21740434 - 21740503
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||| ||||| ||||||| |||||||| || | || ||||||||||||||||||||    
T  21740434 tgttgttatattattataagatgataaatatgt-gttgttatattatgatgagatgatgaatacgttgttg 21740503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 21406579 - 21406538
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  21406579 tgttgttatattaatataagaagatgaatatgttgttgttat 21406538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 33796317 - 33796276
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  33796317 tgttgttatattaatataagaagatgaatatgttgttgttat 33796276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 13883242 - 13883297
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatga 82  Q
    |||||||| ||||| |||||||||||||||||| ||||||| | ||||||||||||    
T  13883242 ttatattattataagatgatgaatatgttgttgcttatgttattataagatgatga 13883297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 21740400 - 21740463
Alignment:
Q  22 gtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||||  || | |||||||||||||||||||||| || | |||||||||| ||||    
T  21740400 gtgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgataaata 21740463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 21740465 - 21740528
Alignment:
Q  22 gtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||||  || | |||||||||| ||||||||||| || | |||||||||||||||    
T  21740465 gtgttgttatattatgatgagatgatgaatacgttgttgttatattattataagatgatgaata 21740528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 22131793 - 22131866
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatat---gttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| |||||||||||||||||   ||||||||||| || | |||| |||||||| | |||||||    
T  22131793 tgttgttatattattataaaatgatgaatatattgttgttgttatattattataaaatgatgaacatgttgttg 22131866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 35982360 - 35982399
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgtt 62  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  35982360 tgttgttatattattataagatgatgaatatgttgttgtt 35982399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 12271082 - 12271028
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatga 82  Q
    |||||||| ||||| |||||||||||||||||||||| || | || |||||||||    
T  12271082 ttatattattataagatgatgaatatgttgttgttatattattatgagatgatga 12271028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 20315895 - 20315849
Alignment:
Q  46 atgaatatgttgttgttatgttttcataagatgatgaatacgttgtt 92  Q
    ||||||||||||||||||| |||| || |||||||||||| ||||||    
T  20315895 atgaatatgttgttgttatattttgatgagatgatgaatatgttgtt 20315849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 21740369 - 21740438
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||| ||||| |||||| ||||||||| || | || |||||||||||| |||||||    
T  21740369 tgttgttatattattataagatgataaatatg-tgttgttatattatgatgagatgatgaatatgttgttg 21740438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 22357280 - 22357214
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||| ||||| |||||||||||||||||| |||| || | ||||||||||||||| |||||||    
T  22357280 ttatgttattataagatgatgaatatgttgttgcttattttattataagatgatgaatatgttgttg 22357214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 22358966 - 22358900
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||| ||||| |||||||||||||||||| |||| || | ||||||||||||||| |||||||    
T  22358966 ttatgttattataagatgatgaatatgttgttgcttattttattataagatgatgaatatgttgttg 22358900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 41306257 - 41306326
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||| |||||||||||| ||||||||| || | || ||||||| |||| |||||||    
T  41306257 tgttgttatattattataagatgatgaatatg-tgttgttatattatgatgagatgattaatatgttgttg 41306326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 93
Target Start/End: Original strand, 41801075 - 41801117
Alignment:
Q  51 tatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||||||||| |||| ||||||||||||||| |||||||    
T  41801075 tatgttgttgttatatttttataagatgatgaatatgttgttg 41801117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 1009634 - 1009593
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  1009634 tgttgttatattaatacaagaagatgaatatgttgttgttat 1009593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 1926348 - 1926389
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  1926348 tgttgttatattaatacaagaagatgaatatgttgttgttat 1926389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 16376599 - 16376640
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  16376599 tgttgttatattaatacaagaagatgaatatgttgttgttat 16376640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 20925362 - 20925403
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  20925362 tgttgttatattaatacaagaagatgaatatgttgttgttat 20925403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 21740341 - 21740398
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    |||||||| ||| | |||||||||||||||||||||| || | |||||||||| ||||    
T  21740341 ttatattattatgagatgatgaatatgttgttgttatattattataagatgataaata 21740398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 35982315 - 35982364
Alignment:
Q  44 tgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||| |||||||||||||| || | ||||||||||||||| |||||||    
T  35982315 tgatgattatgttgttgttatattattataagatgatgaatatgttgttg 35982364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 52634720 - 52634679
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  52634720 tgttgttatattaatacaagaagatgaatatgttgttgttat 52634679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 1009662 - 1009630
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  1009662 ttatattttcataagatgatgaatacgttgttg 1009630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 1926320 - 1926352
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  1926320 ttatattttcataagatgatgaatacgttgttg 1926352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 16371013 - 16370969
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  16371013 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 16370969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 16376571 - 16376603
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  16376571 ttatattttcataagatgatgaatacgttgttg 16376603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 20230002 - 20230034
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgt 55  Q
    ||||||||||||| |||||||||||||||||||    
T  20230002 tgttgttatattattataaaatgatgaatatgt 20230034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 20925334 - 20925366
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  20925334 ttatattttcataagatgatgaatacgttgttg 20925366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 21406607 - 21406575
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  21406607 ttatattttcataagatgatgaatacgttgttg 21406575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 39244909 - 39244945
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  39244909 tgttgttatattattataaagtgatgaatatgttgtt 39244945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 39248464 - 39248500
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  39248464 tgttgttatattattataaagtgatgaatatgttgtt 39248500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 41389357 - 41389393
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  41389357 tgttgttatattattataaagtgatgaatatgttgtt 41389393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 52634748 - 52634716
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  52634748 ttatattttcataagatgatgaatacgttgttg 52634716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 84; Significance: 6e-40; HSPs: 2)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 6245 - 6355
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| ||||||||||| |||| |||||||||||||||    
T  6245 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattagcgatgatgattacatgatgatatctatgagttg 6344  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  6345 ttaagtgtact 6355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 6186 - 6218
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  6186 ttatattttcataagatgatgaatacgttgttg 6218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 60249 - 60360
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt---aagttattagtgatgatgattatatgaagatatctatgagtt 293  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||   |||||||||||||||||||||| |||| ||||||||||||||    
T  60249 gttatgatgtagataattattactatcaataagagatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagtt 60348  T
Q  294 gttaagtgtact 305  Q
    ||||||||||||    
T  60349 gttaagtgtact 60360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 76; Significance: 4e-35; HSPs: 3)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 11204 - 11095
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  11204 gttatgatctagataattattactattaataagagatgattat-ttgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 11106  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  11105 ttaagtgtact 11095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 11428 - 11387
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  11428 tgttgttatattaatacaagaagatgaatatgttgttgttat 11387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 11456 - 11424
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  11456 ttatattttcataagatgatgaatacgttgttg 11424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 34055 - 34162
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||   ||||||||| |||| |||||||||||||||    
T  34055 gttatgatgtagataattattactattaataagagatgattatattgtgttgttttaaagttattag---tgatgattacatgatgatatctatgagttg 34151  T
Q  295 ttaagtgtact 305  Q
    |||||||||||    
T  34152 ttaagtgtact 34162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 5457 - 5565
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgtt 296  Q
    ||||||||||| |||||||||| ||||| |||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||| ||    
T  5457 gttatgatgtatataattattattattattaagtgatgattatattgtgtagtccaagttattagtgatgatgattatatgaagatatttatgagttctt 5556  T
Q  297 aagtgtact 305  Q
    | |||||||    
T  5557 aggtgtact 5565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 5053 - 5094
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||||||||||| |||| ||||||||||||||||||||    
T  5053 tgttgttatattaatacaaaaagatgaatatgttgttgttat 5094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 5025 - 5057
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||||||||||||||| |||||||    
T  5025 ttatgttttcataagatgatgaatatgttgttg 5057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 6921 - 6995
Alignment:
Q  231 gatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||| | ||||||||||||||||| ||||||    
T  6921 gatgattatattgtgttgtttaagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 6995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 55; Significance: 1e-22; HSPs: 5)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 305
Target Start/End: Complemental strand, 4108 - 4018
Alignment:
Q  215 attactattaataagagatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||| ||||| |||| ||||||||||||||||||||||||||||||||||| ||||||| |||| | |||||| |||||||||| ||||||    
T  4108 attattattattaagtgatgattatattgtgtagtttaagttattagtgattatgattacatgatgttatctaggagttgttaaatgtact 4018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 270
Target Start/End: Complemental strand, 45 - 1
Alignment:
Q  226 taagagatgattatattgtgtagtttaagttattagtgatgatga 270  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  45 taagtgatgattatattgtgtagtttaagttattagtgatgatga 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 868 - 829
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgtt 62  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  868 tgttgttatattattataaaatgatgaatatgttgttgtt 829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 981 - 940
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  981 tgttgttatattaatataagaagatgaatatgttgttgttat 940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 1009 - 977
Alignment:
Q  61 ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||||||||||||||||||||||||||||    
T  1009 ttatattttcataagatgatgaatacgttgttg 977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 305
Target Start/End: Original strand, 25512 - 25602
Alignment:
Q  215 attactattaataagagatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||| ||||| |||| |||||||||||||||| ||||||||||||||||||||||| || |||| | ||||||||||||||||| ||||||    
T  25512 attattattattaagtgatgattatattgtgttgtttaagttattagtgatgatgaatacatgatgttatctatgagttgttaaatgtact 25602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 25400 - 25470
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| || |  |||||||||||||||||||||| || | ||| ||||||||||| |||||||    
T  25400 tgttgttatattattacatgatgatgaatatgttgttgttatattattatatgatgatgaatatgttgttg 25470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 25433 - 25491
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatg 81  Q
    ||||||||||||| ||||  |||||||||||||||||||||| ||   |||||||||||    
T  25433 tgttgttatattattatatgatgatgaatatgttgttgttatattactataagatgatg 25491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 14962 - 14888
Alignment:
Q  233 tgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||| ||||||| ||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14962 tgattacattgtgttgttttaaagttattagtgatgatgattacatgaagatatctatgagttgttaagtgtact 14888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 52; Significance: 8e-21; HSPs: 6)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 62771 - 62874
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgtt 296  Q
    ||||||||||| |||||||||| ||||||   | ||||||||||||||  ||||||||||||||||||||||||||| |||| | |||||| ||||||||    
T  62771 gttatgatgtatataattattattattaa---gtgatgattatattgt--agtttaagttattagtgatgatgattacatgatgttatctaggagttgtt 62865  T
Q  297 aagtgtact 305  Q
    || ||||||    
T  62866 aaatgtact 62874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 79533 - 79450
Alignment:
Q  10 tggtgttagtacgtgttg-ttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||| |||||| ||||||| || ||| |||||||||| ||||||||||| |||| |||||||||||||||| ||||||    
T  79533 tggtgttagtatgtgttgattatatttatgtaagatgatgaatacgttgttgttatatttt-ataagatgatgaatacattgttg 79450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 62553 - 62600
Alignment:
Q  46 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  62553 atgaatatgttgttgttatattttcataagatgttgaatacgttgttg 62600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 66469 - 66516
Alignment:
Q  46 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  66469 atgaatatgttgttgttatattttcataagatgttgaatacgttgttg 66516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 79454 - 79413
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  79454 tgttgttatattaatataagaagatgaatatgttgttgttat 79413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 62706 - 62743
Alignment:
Q  25 ttgttatattaatataaaatgatgaatatgttgttgtt 62  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  62706 ttgttatattattataaaatgatgaatatgatgttgtt 62743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 21299 - 21374
Alignment:
Q  231 gatgattatattgtgtagtttaa-gttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||||| |||||| |||||||||||||||||||| |||| | ||||||||||||||||| ||||||    
T  21299 gatgattatattgtgttgtttaaagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 21374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 21151 - 21220
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgtt 92  Q
    ||||||||||||  ||||| |||||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  21151 tgttgttatatttttataagatgatgaatatgttgttgttatatttttataagatgatgaatatgttgtt 21220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 93
Target Start/End: Original strand, 21146 - 21188
Alignment:
Q  51 tatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||||||||| |||| ||||||||||||||| |||||||    
T  21146 tatgttgttgttatatttttataagatgatgaatatgttgttg 21188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 274
Target Start/End: Original strand, 22285 - 22359
Alignment:
Q  197 gttatgatgtagataattattactattaataagagatgattatattgtgtagtttaagttattagtgatgatgattat 274  Q
    ||||||||||| |||||||||| ||||||   | ||||||||||||||||||||| ||||||||||||||||||||||    
T  22285 gttatgatgtatataattattattattaa---gtgatgattatattgtgtagtttgagttattagtgatgatgattat 22359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 47; Significance: 8e-18; HSPs: 4)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 8575 - 8645
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||||||||||||||| |||||||||| || | ||||||||||||||| |||||||    
T  8575 tgttgttatattattataaaatgatgaatatattgttgttatattattataagatgatgaatatgttgttg 8645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 8608 - 8678
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||| |||||||||||||||||||||| || | | ||||||||||||| |||||||    
T  8608 tgttgttatattattataagatgatgaatatgttgttgttatattattagaagatgatgaatatgttgttg 8678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 8542 - 8604
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||| ||||| |||||||||||||||||||||| || | |||| ||||||||||    
T  8542 tgttgttatattattataagatgatgaatatgttgttgttatattattataaaatgatgaata 8604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 8641 - 8693
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataag 75  Q
    ||||||||||||| || || |||||||||||||||||||||| || |||||||    
T  8641 tgttgttatattattagaagatgatgaatatgttgttgttatattatcataag 8693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 47; Significance: 8e-18; HSPs: 6)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 231 - 305
Target Start/End: Complemental strand, 18941 - 18867
Alignment:
Q  231 gatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||||| |||| |||||||||||||||||||||| ||| | ||||||| ||||||||| ||||||    
T  18941 gatgattatattgtgttgtttcagttattagtgatgatgattatgtgatgttatctataagttgttaaatgtact 18867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 93
Target Start/End: Complemental strand, 19192 - 19150
Alignment:
Q  51 tatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||||||||| |||| |||||||||||||||||||||||    
T  19192 tatgttgttgttatatttttataagatgatgaatacgttgttg 19150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 93
Target Start/End: Complemental strand, 19296 - 19254
Alignment:
Q  51 tatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||||||||| |||| |||||||||||||||||||||||    
T  19296 tatgttgttgttatatttttataagatgatgaatacgttgttg 19254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 19154 - 19113
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  19154 tgttgttatattaatataagaagatgaatatgttgttgttat 19113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 19187 - 19117
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||  ||||| |||||||||| ||||||||||| ||   |||||| |||||||| |||||||    
T  19187 tgttgttatatttttataagatgatgaatacgttgttgttatattaatataagaagatgaatatgttgttg 19117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 19258 - 19217
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    |||||||| |||||||||| | ||||||||||||||||||||    
T  19258 tgttgttagattaatataagaagatgaatatgttgttgttat 19217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 220 - 305
Target Start/End: Original strand, 37149 - 37232
Alignment:
Q  220 tattaataagagatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    ||||| |||| ||||||||||||||  ||||||||||||||||||||||||||| |||| | |||||| |||||||||| ||||||    
T  37149 tattattaagtgatgattatattgt--agtttaagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtact 37232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 37065 - 37101
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  37065 tgttgttatattattataaaatgatgactatgttgtt 37101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 252 - 305
Target Start/End: Complemental strand, 8674 - 8621
Alignment:
Q  252 aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  8674 aagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 8621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 8909 - 8870
Alignment:
Q  25 ttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  8909 ttgttatattaatataaaaagatgaatatgttgttgttat 8870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 8700 - 8773
Alignment:
Q  231 gatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtac 304  Q
    |||||||||||||||| |||||| ||||||||||||||||||| |||| | |||||| |||||||||| |||||    
T  8700 gatgattatattgtgttgtttaatttattagtgatgatgattacatgatgttatctacgagttgttaaatgtac 8773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 8514 - 8550
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  8514 tgttgttatattattataaaatgatgagtatgttgtt 8550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 252 - 304
Target Start/End: Original strand, 11041 - 11093
Alignment:
Q  252 aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtac 304  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  11041 aagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtac 11093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 10761 - 10802
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  10761 tgttgttatattaatataagaagatgaatatgttgttgttat 10802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 781 - 855
Alignment:
Q  233 tgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||| ||||||| ||||  |||||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  781 tgattacattgtgttgttttaaagttattagtgatgatgattgcatgatgatatctatgagttgttaagtgtact 855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 401 - 457
Alignment:
Q  25 ttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatg 81  Q
    ||||||||||  ||||| |||||||||||||||| ||||| |||| |||||||||||    
T  401 ttgttatatttttataagatgatgaatatgttgtggttatatttttataagatgatg 457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 3060 - 2994
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||| |||||||||||||||||||||||| ||||||| | ||||||||||||||| |||||||    
T  3060 ttatattattataaaatgatgaatatgttgttgcttatgttattataagatgatgaatatgttgttg 2994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 4)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 11166 - 11116
Alignment:
Q  43 atgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  11166 atgatgaatatgttgttgttatattttcataagatgatgaatacattgttg 11116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 11153 - 11083
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||   |||| ||||||||||  |||||||||| |||| |||||||||||||||||||||||    
T  11153 tgttgttatattttcataagatgatgaatacattgttgttatatttttataagatgatgaatacgttgttg 11083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 11087 - 11046
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttat 64  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  11087 tgttgttatattaatataagaagatgaatatgttgttgttat 11046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 11120 - 11050
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||  ||||| |||||||||| ||||||||||| ||   |||||| |||||||| |||||||    
T  11120 tgttgttatatttttataagatgatgaatacgttgttgttatattaatataagaagatgaatatgttgttg 11050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 74292 - 74366
Alignment:
Q  231 gatgattatattgtgtagtttaagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| |||| | ||||||||||||||||| ||||||    
T  74292 gatgattatatggtgttgtttaatttattagtgaagatgattacatgatgttatctatgagttgttaaatgtact 74366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 277
Target Start/End: Original strand, 74240 - 74303
Alignment:
Q  215 attactattaataagagatgattatattgtgtagtttaagttatta-gtgatgatgattatatg 277  Q
    |||| ||||| |||| |||||||||||||||| || |||||||||| | |||||||||||||||    
T  74240 attattattattaagtgatgattatattgtgtggtctaagttattatgagatgatgattatatg 74303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 74072 - 74142
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgtt-ttcataagatgatgaatacgttgtt 92  Q
    ||||||||||||  ||||| |||||||||||||||||||||| || || | || |||||||||| ||||||    
T  74072 tgttgttatatttctataagatgatgaatatgttgttgttatattattaaaaaaatgatgaatatgttgtt 74142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 37162 - 37237
Alignment:
Q  231 gatgattatattgtgtagtttaagttatta-gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||||| || |||||||||| | ||||||||||| |||| | ||||||||||||||||| ||||||    
T  37162 gatgattatattgtgtggtctaagttattatgagatgatgattacatgatgttatctatgagttgttaaatgtact 37237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 37051 - 37117
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttg 90  Q
    ||||||||||||  ||||| |||||||||||||||||| ||| |||| ||||||||||||||| ||||    
T  37051 tgttgttatatttttataagatgatgaatatgttgttg-tatatttttataagatgatgaatatgttg 37117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 93
Target Start/End: Original strand, 37046 - 37088
Alignment:
Q  51 tatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||||||||| |||| ||||||||||||||| |||||||    
T  37046 tatgttgttgttatatttttataagatgatgaatatgttgttg 37088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 11895 - 11821
Alignment:
Q  233 tgattatattgtgtagttt--aagttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||| ||||||| ||||  || ||||||||||||||||||| |||| || |||||||||||||||||||||||    
T  11895 tgattacattgtgttgttttaaaattattagtgatgatgattacatgatgaaatctatgagttgttaagtgtact 11821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 362117 - 362054
Alignment:
Q  22 gtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||||  || |||||||||||||||||||||||| || | |||||||||||||||    
T  362117 gtgttgttatattatgatgaaatgatgaatatgttgttgttatattattataagatgatgaata 362054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 362215 - 362152
Alignment:
Q  22 gtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    |||||||||||||| ||| | |||||||||||||||||||||| || | || ||||||||||||    
T  362215 gtgttgttatattattatgagatgatgaatatgttgttgttatattatgatgagatgatgaata 362152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 362083 - 362022
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||| ||||| |||||||||||| ||||||| | || | |||||||||||||||    
T  362083 tgttgttatattattataagatgatgaatatg-tgttgttgtattattataagatgatgaata 362022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 362246 - 362177
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||| ||||| |||||| ||||||||| || | || |||||||||||| |||||||    
T  362246 tgttgttatattattataagatgataaatatg-tgttgttatattattatgagatgatgaatatgttgttg 362177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 362274 - 362217
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    |||||||| ||| | |||||||||||||||||||||| || | |||||||||| ||||    
T  362274 ttatattattatgagatgatgaatatgttgttgttatattattataagatgataaata 362217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 6112 - 6042
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||   |||| | |||||||||||||||||||| ||||||||||| |||||||| |||||||    
T  6112 tgttgttatattttcataagaagatgaatatgttgttgttatattttcataagaagatgaatatgttgttg 6042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 6121 - 6075
Alignment:
Q  47 tgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||||||||||||| ||||||||||| |||||||| |||||||    
T  6121 tgaatatgttgttgttatattttcataagaagatgaatatgttgttg 6075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 305
Target Start/End: Complemental strand, 5917 - 5869
Alignment:
Q  255 ttattagtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    ||||||||||||||||||| |||| ||||  ||||||||||||||||||||    
T  5917 ttattagtgatgatgattacatgatgata--tatgagttgttaagtgtact 5869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 4)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 2944 - 2886
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatg 81  Q
    ||||||||||||| |||||||||||||| ||||||||||||| || | |||||||||||    
T  2944 tgttgttatattattataaaatgatgaacatgttgttgttatattattataagatgatg 2886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 7007 - 6949
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatg 81  Q
    ||||||||||||| |||||||||||||| ||||||||||||| || | |||||||||||    
T  7007 tgttgttatattattataaaatgatgaacatgttgttgttatattattataagatgatg 6949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 2977 - 2907
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||||||||  |||||||||| || ||||||||||||| || | |||| |||||||| | |||||||    
T  2977 tgttgttatattatgataaaatgataaacatgttgttgttatattattataaaatgatgaacatgttgttg 2907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 7040 - 6970
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||||||||  |||||||||| || ||||||||||||| || | |||| |||||||| | |||||||    
T  7040 tgttgttatattatgataaaatgataaacatgttgttgttatattattataaaatgatgaacatgttgttg 6970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1873 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1873
Description:

Target: scaffold1873; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 265
Target Start/End: Complemental strand, 779 - 717
Alignment:
Q  201 tgatgtagataattattactattaataagagatgattatattgtgtagtttaagttattagtgat 265  Q
    ||||||| |||||||||| ||||||  || |||||||||||||||| ||||||||||||||||||    
T  779 tgatgtatataattattattattaa--agtgatgattatattgtgttgtttaagttattagtgat 717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 36; Significance: 0.00000000003; HSPs: 4)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 7023 - 6960
Alignment:
Q  22 gtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||||  || | |||||||||||||||||||||| || | |||||||||||||||    
T  7023 gtgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatgaata 6960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 7088 - 7025
Alignment:
Q  22 gtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||||  || | |||||||||||||||||||| | || | |||||||||||||||    
T  7088 gtgttgttatattatgatgagatgatgaatatgttgttgttgtattattataagatgatgaata 7025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 6989 - 6928
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||| ||||| |||||||||||| ||||||| | || | |||||||||||||||    
T  6989 tgttgttatattattataagatgatgaatatg-tgttgttgtattattataagatgatgaata 6928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 7054 - 6985
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||| ||||| ||||| |||||||||||| ||||||||| || | || |||||||||||| |||||||    
T  7054 tgttgttgtattattataagatgatgaatatg-tgttgttatattatgatgagatgatgaatatgttgttg 6985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 36; Significance: 0.00000000003; HSPs: 4)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 44420 - 44483
Alignment:
Q  22 gtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||||  || | |||||||||||||||||||||| || | |||||||||||||||    
T  44420 gtgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatgaata 44483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 44485 - 44548
Alignment:
Q  22 gtgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||||  || | |||||||||||||||||||||| || | |||||||||||||||    
T  44485 gtgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatgaata 44548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 44454 - 44523
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    ||||||||||||| ||||| |||||||||||| ||||||||| || | || |||||||||||| |||||||    
T  44454 tgttgttatattattataagatgatgaatatg-tgttgttatattatgatgagatgatgaatatgttgttg 44523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 44519 - 44580
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||| ||||| |||||||||||| ||||||| | || | |||||||||||||||    
T  44519 tgttgttatattattataagatgatgaatatg-tgttgttgtattattataagatgatgaata 44580  T

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Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 75921 - 75856
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgtt 92  Q
    |||||||| ||||| |||||||||||||||||| ||||||| | |||||||||||| || ||||||    
T  75921 ttatattattataagatgatgaatatgttgttgcttatgttattataagatgatgattatgttgtt 75856  T

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Target: scaffold0484 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 60 - 21
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgtt 62  Q
    |||| |||||||| ||||||||||||||||||||||||||    
T  60 tgttattatattattataaaatgatgaatatgttgttgtt 21  T

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Target: scaffold0484; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 79 - 23
Alignment:
Q  37 tataaaatgatgaatatgttgttgttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||||||||| |||||||| |||| || | |||| |||||||||| |||||||    
T  79 tataaaatgatgaacatgttgttattatattattataaaatgatgaatatgttgttg 23  T

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Target: scaffold0032 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 66801 - 66746
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatga 82  Q
    |||||||| ||||| |||||||||||||||||| ||||||| | ||||||||||||    
T  66801 ttatattattataagatgatgaatatgttgttgcttatgttattataagatgatga 66746  T

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Target: scaffold0561 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 10175 - 10109
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||| ||| ||||| ||||||||||| |||||| ||||||| | ||||||||||||||| |||||||    
T  10175 ttatgttattataagatgatgaatatattgttgcttatgttattataagatgatgaatatgttgttg 10109  T

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Target: scaffold0239 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 22114 - 22180
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||| ||||| | |||||||||||||||| ||||||| | |||||||||||| || |||||||    
T  22114 ttatattattataagaggatgaatatgttgttgcttatgttattataagatgatgattatgttgttg 22180  T

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Target: scaffold0125 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 2461 - 2527
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||| ||||| |||||||||||||| ||| ||||||| | |||||||||||| || |||||||    
T  2461 ttatattattataagatgatgaatatgttattgattatgttattataagatgatgattatgttgttg 2527  T

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Target: scaffold0076 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 26790 - 26856
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||| ||||| ||||||||||| |||||| ||||||| | |||||||||||| || |||||||    
T  26790 ttatattattataagatgatgaatatattgttgcttatgttattataagatgatgattatgttgttg 26856  T

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Target: scaffold0043 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 9098 - 9037
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    ||||||||||||| ||||| |||||||||||| ||||||| | || | |||||||||||||||    
T  9098 tgttgttatattattataagatgatgaatatg-tgttgttgtattattataagatgatgaata 9037  T

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Target: scaffold0043; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 9111 - 9069
Alignment:
Q  43 atgatgaatatgttgttgttatgttttcataagatgatgaata 85  Q
    |||||||||||||||||||||| || | |||||||||||||||    
T  9111 atgatgaatatgttgttgttatattattataagatgatgaata 9069  T

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Target: scaffold0037 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 68871 - 68805
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgttg 93  Q
    |||||||| ||||| |||||||||||||||||| ||||||| | |||||| ||||| || |||||||    
T  68871 ttatattattataagatgatgaatatgttgttgcttatgttattataagaagatgattatgttgttg 68805  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 170395 - 170460
Alignment:
Q  28 ttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatgaatacgttgtt 92  Q
    |||||||  ||||| |||||||||||||||||| ||||||| | |||||||||||| || ||||||    
T  170395 ttatatttttataagatgatgaatatgttgttgcttatgttattataagatgatgattatgttgtt 170460  T

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Target: scaffold0017 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 8527 - 8588
Alignment:
Q  22 gtgttgttatattaatataaaatgatgaatatgttgttg-ttatgttttcataagatgatga 82  Q
    |||||||||||||| ||||| ||||||| |||||||||| |||| || | ||||||||||||    
T  8527 gtgttgttatattattataagatgatgattatgttgttgtttatattattataagatgatga 8588  T

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Target: scaffold1427 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 288 - 244
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  288 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 244  T

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Target: scaffold0842 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 5330 - 5286
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  5330 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 5286  T

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Target: scaffold0337 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 10812 - 10856
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  10812 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 10856  T

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Target: scaffold0080 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 28560 - 28516
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    ||||||||||||| |||| | ||||||||||||||||| ||||||    
T  28560 gtgatgatgattacatgatgttatctatgagttgttaaatgtact 28516  T

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Target: scaffold0080; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 34025 - 33981
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    ||||||||||||| |||| | ||||||||||||||||| ||||||    
T  34025 gtgatgatgattacatgatgttatctatgagttgttaaatgtact 33981  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 109689 - 109645
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  109689 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 109645  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 116036 - 116000
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  116036 tgttgttatatcaatataagatgatgaatatgttgtt 116000  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 224133 - 224177
Alignment:
Q  261 gtgatgatgattatatgaagatatctatgagttgttaagtgtact 305  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  224133 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 224177  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 71545 - 71509
Alignment:
Q  23 tgttgttatattaatataaaatgatgaatatgttgtt 59  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  71545 tgttgttatatcaatataagatgatgaatatgttgtt 71509  T

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