View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21671_high_6 (Length: 372)

Name: NF21671_high_6
Description: NF21671
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21671_high_6
NF21671_high_6
[»] chr7 (86 HSPs)
chr7 (7-117)||(18278293-18278403)
chr7 (7-117)||(18282256-18282366)
chr7 (295-372)||(31769-31845)
chr7 (28-116)||(2833167-2833256)
chr7 (295-372)||(12706081-12706157)
chr7 (295-372)||(12713584-12713660)
chr7 (295-372)||(12717331-12717407)
chr7 (295-372)||(12722242-12722318)
chr7 (295-372)||(16908468-16908544)
chr7 (295-372)||(18278038-18278114)
chr7 (295-372)||(18282002-18282078)
chr7 (297-372)||(2833442-2833516)
chr7 (297-372)||(15083270-15083344)
chr7 (7-99)||(31976-32069)
chr7 (7-99)||(12713791-12713884)
chr7 (7-99)||(12717615-12717708)
chr7 (7-99)||(12722526-12722619)
chr7 (37-116)||(18278261-18278341)
chr7 (37-116)||(18282224-18282304)
chr7 (294-372)||(25928330-25928406)
chr7 (294-372)||(20486786-20486861)
chr7 (55-117)||(2833161-2833224)
chr7 (297-372)||(39721240-39721314)
chr7 (7-99)||(71968-72053)
chr7 (7-99)||(76077-76162)
chr7 (294-372)||(10607280-10607355)
chr7 (297-372)||(2531293-2531367)
chr7 (297-372)||(7520176-7520250)
chr7 (28-116)||(6170752-6170842)
chr7 (293-372)||(9752466-9752542)
chr7 (293-372)||(18301395-18301471)
chr7 (319-372)||(26291201-26291254)
chr7 (294-372)||(16582465-16582540)
chr7 (28-99)||(18278246-18278317)
chr7 (28-99)||(18282209-18282280)
chr7 (9-99)||(45171209-45171303)
chr7 (43-116)||(9390351-9390426)
chr7 (55-116)||(25928182-25928245)
chr7 (28-97)||(2833200-2833269)
chr7 (28-116)||(16582695-16582785)
chr7 (28-97)||(25928188-25928258)
chr7 (28-116)||(26291338-26291428)
chr7 (28-114)||(6170785-6170873)
chr7 (55-116)||(6170746-6170809)
chr7 (293-372)||(1859979-1860056)
chr7 (293-372)||(13919370-13919447)
chr7 (28-116)||(14270709-14270798)
chr7 (28-116)||(16582630-16582719)
chr7 (28-116)||(17231856-17231945)
chr7 (28-116)||(17231921-17232010)
chr7 (28-116)||(17231986-17232075)
chr7 (41-116)||(17231824-17231900)
chr7 (7-67)||(12705813-12705873)
chr7 (46-116)||(18424703-18424775)
chr7 (295-338)||(72341-72383)
chr7 (295-338)||(76450-76492)
chr7 (28-94)||(9390369-9390436)
chr7 (37-113)||(15112352-15112431)
chr7 (37-113)||(15115924-15116003)
chr7 (55-116)||(20486910-20486972)
chr7 (325-372)||(39268301-39268348)
chr7 (41-113)||(8467832-8467905)
chr7 (28-97)||(20486897-20486966)
chr7 (58-99)||(26291389-26291431)
chr7 (55-99)||(2531044-2531089)
chr7 (30-90)||(10607135-10607196)
chr7 (41-116)||(14270689-14270765)
chr7 (41-116)||(17232019-17232095)
chr7 (9-90)||(18424348-18424428)
chr7 (28-99)||(2531050-2531122)
chr7 (73-116)||(8467861-8467905)
chr7 (69-116)||(10607142-10607190)
chr7 (328-372)||(11660326-11660370)
chr7 (328-372)||(13891674-13891718)
chr7 (46-116)||(18424590-18424662)
chr7 (37-94)||(6170827-6170885)
chr7 (28-112)||(9752345-9752431)
chr7 (38-91)||(18424583-18424637)
chr7 (55-99)||(9752339-9752384)
chr7 (20-113)||(15719537-15719634)
chr7 (38-90)||(18424697-18424750)
chr7 (297-338)||(45171472-45171512)
chr7 (332-372)||(13892057-13892097)
chr7 (22-81)||(15112352-15112412)
chr7 (22-81)||(15115924-15115984)
chr7 (28-94)||(16998073-16998141)
[»] scaffold0029 (8 HSPs)
scaffold0029 (9-116)||(79425-79533)
scaffold0029 (71-117)||(79457-79503)
scaffold0029 (28-99)||(79410-79481)
scaffold0029 (46-116)||(62553-62624)
scaffold0029 (46-116)||(66469-66540)
scaffold0029 (319-372)||(62821-62874)
scaffold0029 (28-93)||(62568-62633)
scaffold0029 (28-93)||(66484-66549)
[»] scaffold0028 (1 HSPs)
scaffold0028 (295-372)||(60283-60360)
[»] chr3 (79 HSPs)
chr3 (9-93)||(14067674-14067759)
chr3 (295-372)||(7108282-7108358)
chr3 (295-372)||(7112217-7112293)
chr3 (295-372)||(11068657-11068733)
chr3 (295-372)||(22320173-22320249)
chr3 (295-372)||(22335228-22335304)
chr3 (295-372)||(55021420-55021496)
chr3 (295-372)||(11167052-11167128)
chr3 (295-372)||(14497991-14498067)
chr3 (295-372)||(15616221-15616297)
chr3 (295-372)||(28948505-28948581)
chr3 (297-372)||(5219891-5219965)
chr3 (297-372)||(11853750-11853824)
chr3 (297-372)||(37440641-37440715)
chr3 (7-99)||(7108566-7108659)
chr3 (7-99)||(7112501-7112594)
chr3 (7-99)||(11166674-11166767)
chr3 (7-99)||(14498275-14498368)
chr3 (7-99)||(15616505-15616598)
chr3 (7-99)||(22320534-22320627)
chr3 (7-99)||(22335589-22335682)
chr3 (7-99)||(28948712-28948805)
chr3 (7-99)||(30064717-30064810)
chr3 (7-99)||(55021855-55021948)
chr3 (9-99)||(11069018-11069109)
chr3 (297-372)||(11301626-11301700)
chr3 (297-372)||(14664469-14664543)
chr3 (297-372)||(14667633-14667707)
chr3 (294-372)||(16795547-16795622)
chr3 (7-99)||(4108385-4108470)
chr3 (7-99)||(4112237-4112322)
chr3 (296-372)||(12853325-12853398)
chr3 (319-372)||(18933337-18933390)
chr3 (319-372)||(30064429-30064482)
chr3 (9-99)||(15963773-15963867)
chr3 (9-99)||(15967697-15967791)
chr3 (9-99)||(15971621-15971715)
chr3 (293-370)||(14068021-14068095)
chr3 (55-116)||(18440569-18440632)
chr3 (55-116)||(19485643-19485706)
chr3 (61-117)||(14067693-14067751)
chr3 (38-99)||(4589893-4589954)
chr3 (293-372)||(4590119-4590195)
chr3 (31-99)||(11301386-11301455)
chr3 (28-99)||(14664717-14664789)
chr3 (28-99)||(14667881-14667953)
chr3 (46-116)||(4589868-4589939)
chr3 (55-116)||(18440491-18440554)
chr3 (28-94)||(18440575-18440642)
chr3 (55-116)||(19485565-19485628)
chr3 (28-94)||(19485649-19485716)
chr3 (294-372)||(14670070-14670142)
chr3 (293-372)||(15463922-15463999)
chr3 (293-372)||(17318468-17318544)
chr3 (68-116)||(49390328-49390377)
chr3 (37-93)||(49390329-49390386)
chr3 (28-99)||(12338834-12338906)
chr3 (46-116)||(16751555-16751627)
chr3 (46-116)||(19774537-19774609)
chr3 (295-338)||(4112607-4112649)
chr3 (66-116)||(11301389-11301440)
chr3 (322-372)||(12337300-12337348)
chr3 (55-116)||(12338849-12338912)
chr3 (55-116)||(14664732-14664795)
chr3 (55-116)||(14667896-14667959)
chr3 (296-338)||(4108759-4108800)
chr3 (43-99)||(12853049-12853106)
chr3 (9-90)||(16751788-16751868)
chr3 (28-94)||(18440497-18440564)
chr3 (28-94)||(19485571-19485638)
chr3 (38-91)||(16751580-16751634)
chr3 (38-91)||(19774530-19774584)
chr3 (331-372)||(10834935-10834976)
chr3 (297-338)||(15963564-15963604)
chr3 (297-338)||(15967488-15967528)
chr3 (297-338)||(15971412-15971452)
chr3 (9-90)||(19774311-19774391)
chr3 (328-372)||(8928858-8928902)
chr3 (328-372)||(13435862-13435906)
[»] scaffold0061 (2 HSPs)
scaffold0061 (295-372)||(68514-68590)
scaffold0061 (7-67)||(68326-68386)
[»] chr8 (38 HSPs)
chr8 (295-372)||(21974142-21974218)
chr8 (295-372)||(21978252-21978328)
chr8 (295-372)||(43250246-43250322)
chr8 (297-372)||(14399053-14399127)
chr8 (297-372)||(21409945-21410019)
chr8 (297-372)||(21804437-21804511)
chr8 (7-99)||(21973687-21973780)
chr8 (7-99)||(22110918-22111011)
chr8 (7-99)||(43250678-43250771)
chr8 (7-99)||(21829137-21829222)
chr8 (7-67)||(21977778-21977838)
chr8 (294-372)||(23427870-23427945)
chr8 (294-372)||(23913309-23913384)
chr8 (294-372)||(44385793-44385868)
chr8 (37-116)||(20983486-20983567)
chr8 (293-372)||(21386203-21386279)
chr8 (9-99)||(30941273-30941367)
chr8 (9-99)||(18863813-18863907)
chr8 (28-116)||(20983510-20983600)
chr8 (56-116)||(38550622-38550684)
chr8 (41-116)||(38550705-38550781)
chr8 (295-338)||(21829430-21829472)
chr8 (58-99)||(15924294-15924336)
chr8 (28-116)||(38550660-38550749)
chr8 (68-116)||(20983485-20983534)
chr8 (18-116)||(38550618-38550716)
chr8 (61-99)||(21977799-21977838)
chr8 (295-338)||(22110668-22110710)
chr8 (43-115)||(1323734-1323807)
chr8 (75-116)||(1323734-1323776)
chr8 (28-116)||(1323752-1323841)
chr8 (56-116)||(13428679-13428741)
chr8 (41-116)||(1323797-1323873)
chr8 (55-99)||(14398838-14398883)
chr8 (297-338)||(18864076-18864116)
chr8 (297-338)||(30941536-30941576)
chr8 (28-91)||(20983543-20983607)
chr8 (55-113)||(23913379-23913438)
[»] chr6 (51 HSPs)
chr6 (295-372)||(8242456-8242532)
chr6 (295-372)||(11565445-11565521)
chr6 (295-372)||(12620292-12620368)
chr6 (295-372)||(22861799-22861875)
chr6 (295-372)||(23988347-23988423)
chr6 (294-372)||(11716898-11716975)
chr6 (7-99)||(8242741-8242834)
chr6 (7-99)||(11565729-11565822)
chr6 (7-99)||(12619988-12620081)
chr6 (7-99)||(23988827-23988920)
chr6 (297-372)||(27555583-27555657)
chr6 (10-99)||(22947984-22948074)
chr6 (10-99)||(22951940-22952030)
chr6 (10-99)||(23870428-23870518)
chr6 (10-99)||(23874384-23874474)
chr6 (294-370)||(2076332-2076405)
chr6 (7-99)||(16759112-16759197)
chr6 (28-116)||(22075071-22075161)
chr6 (297-372)||(22075347-22075425)
chr6 (9-99)||(19869463-19869557)
chr6 (9-99)||(23393917-23394011)
chr6 (9-99)||(23413825-23413919)
chr6 (46-116)||(18918401-18918472)
chr6 (9-67)||(14471240-14471298)
chr6 (293-372)||(18918539-18918615)
chr6 (319-372)||(23400722-23400775)
chr6 (55-116)||(22075065-22075128)
chr6 (28-94)||(18918416-18918482)
chr6 (293-372)||(14470925-14471001)
chr6 (28-99)||(22075104-22075176)
chr6 (9-90)||(31479348-31479428)
chr6 (293-347)||(1643321-1643372)
chr6 (295-338)||(22947734-22947776)
chr6 (295-338)||(22951690-22951732)
chr6 (295-338)||(23870178-23870220)
chr6 (295-338)||(23874134-23874176)
chr6 (58-99)||(1643567-1643609)
chr6 (44-116)||(18913300-18913373)
chr6 (319-372)||(18953465-18953518)
chr6 (28-99)||(1643534-1643606)
chr6 (46-116)||(16623143-16623215)
chr6 (28-113)||(2076436-2076514)
chr6 (295-338)||(16758782-16758824)
chr6 (56-113)||(31479361-31479419)
chr6 (297-338)||(19869254-19869294)
chr6 (297-338)||(23393708-23393748)
chr6 (297-338)||(23413616-23413656)
chr6 (22-92)||(2200814-2200886)
chr6 (78-117)||(18918401-18918441)
chr6 (22-84)||(22420596-22420660)
chr6 (41-84)||(31630906-31630950)
[»] chr5 (42 HSPs)
chr5 (295-372)||(19474131-19474207)
chr5 (295-372)||(20294558-20294634)
chr5 (297-372)||(18354841-18354915)
chr5 (7-99)||(20294768-20294861)
chr5 (7-94)||(40727067-40727157)
chr5 (9-99)||(19473832-19473923)
chr5 (304-371)||(24768530-24768596)
chr5 (293-372)||(20912211-20912287)
chr5 (293-372)||(15238076-15238152)
chr5 (37-116)||(18355052-18355132)
chr5 (294-372)||(22108409-22108484)
chr5 (9-94)||(18355143-18355232)
chr5 (28-116)||(22108157-22108247)
chr5 (9-99)||(11219831-11219925)
chr5 (9-99)||(11224417-11224511)
chr5 (9-99)||(11230229-11230323)
chr5 (9-67)||(11226433-11226491)
chr5 (28-116)||(22120302-22120392)
chr5 (55-116)||(24768231-24768293)
chr5 (293-361)||(40727358-40727423)
chr5 (13-99)||(11228239-11228329)
chr5 (28-99)||(18355037-18355108)
chr5 (42-112)||(20912104-20912176)
chr5 (294-372)||(22120551-22120626)
chr5 (55-116)||(5889803-5889866)
chr5 (28-116)||(5889809-5889902)
chr5 (55-117)||(18355084-18355147)
chr5 (43-116)||(22120284-22120359)
chr5 (37-99)||(24768245-24768308)
chr5 (9-81)||(10751939-10752010)
chr5 (28-91)||(22120335-22120399)
chr5 (55-99)||(5889872-5889917)
chr5 (66-112)||(40727094-40727143)
chr5 (56-113)||(10751939-10751997)
chr5 (297-338)||(11219622-11219662)
chr5 (297-338)||(11224208-11224248)
chr5 (297-338)||(11226224-11226264)
chr5 (297-338)||(11228030-11228070)
chr5 (297-338)||(11230020-11230060)
chr5 (28-80)||(20912123-20912176)
chr5 (55-94)||(21742239-21742279)
chr5 (55-94)||(29915658-29915698)
[»] chr4 (51 HSPs)
chr4 (295-372)||(9555113-9555189)
chr4 (295-372)||(14758950-14759026)
chr4 (295-372)||(14955718-14955794)
chr4 (295-372)||(17807098-17807174)
chr4 (295-372)||(25688486-25688562)
chr4 (295-372)||(33740880-33740956)
chr4 (295-372)||(4562732-4562808)
chr4 (295-372)||(5758414-5758490)
chr4 (297-372)||(20158408-20158482)
chr4 (7-99)||(4562431-4562524)
chr4 (7-99)||(9555397-9555490)
chr4 (7-99)||(14758572-14758665)
chr4 (7-99)||(14955337-14955430)
chr4 (7-99)||(33741167-33741260)
chr4 (297-372)||(20161084-20161158)
chr4 (297-372)||(20163859-20163933)
chr4 (28-116)||(15189734-15189824)
chr4 (10-99)||(25688770-25688860)
chr4 (7-99)||(5757956-5758049)
chr4 (293-372)||(23996925-23997001)
chr4 (294-372)||(12422987-12423062)
chr4 (294-372)||(17052405-17052480)
chr4 (295-372)||(12486315-12486388)
chr4 (293-372)||(631706-631782)
chr4 (293-372)||(22634885-22634961)
chr4 (297-372)||(10711869-10711943)
chr4 (297-372)||(10925639-10925713)
chr4 (46-116)||(27532939-27533010)
chr4 (293-372)||(27532796-27532872)
chr4 (9-99)||(12486519-12486613)
chr4 (28-94)||(15189724-15189791)
chr4 (12-112)||(17048922-17049027)
chr4 (28-94)||(27532929-27532995)
chr4 (41-116)||(15481998-15482074)
chr4 (46-116)||(15223901-15223973)
chr4 (325-372)||(13813820-13813867)
chr4 (325-372)||(13818308-13818355)
chr4 (56-116)||(15481980-15482042)
chr4 (56-116)||(19857004-19857066)
chr4 (41-116)||(361514-361590)
chr4 (9-90)||(15223659-15223739)
chr4 (41-116)||(19856972-19857048)
chr4 (328-372)||(24048375-24048419)
chr4 (78-117)||(27532970-27533010)
chr4 (12-94)||(631566-631649)
chr4 (28-112)||(12423189-12423278)
chr4 (20-116)||(15481876-15481977)
chr4 (55-112)||(22634791-22634850)
chr4 (56-116)||(361546-361608)
chr4 (12-91)||(23996736-23996813)
chr4 (38-90)||(15223895-15223948)
[»] chr2 (24 HSPs)
chr2 (295-372)||(24630006-24630082)
chr2 (295-372)||(24645195-24645271)
chr2 (295-372)||(24647971-24648047)
chr2 (295-372)||(27600415-27600491)
chr2 (295-372)||(30346616-30346692)
chr2 (295-372)||(10103255-10103331)
chr2 (295-372)||(12902565-12902641)
chr2 (295-372)||(27380952-27381028)
chr2 (295-372)||(27384922-27384998)
chr2 (7-101)||(24629625-24629720)
chr2 (7-99)||(10102954-10103047)
chr2 (7-99)||(27600699-27600792)
chr2 (7-99)||(30346161-30346254)
chr2 (7-99)||(27384544-27384637)
chr2 (297-372)||(31343961-31344035)
chr2 (7-99)||(27380498-27380591)
chr2 (294-361)||(9784049-9784113)
chr2 (9-99)||(41532151-41532245)
chr2 (9-99)||(1282300-1282394)
chr2 (55-99)||(31344236-31344280)
chr2 (7-67)||(24648255-24648315)
chr2 (28-99)||(31344203-31344274)
chr2 (86-117)||(31344250-31344281)
chr2 (297-338)||(41532414-41532454)
[»] chr1 (57 HSPs)
chr1 (295-372)||(1009306-1009382)
chr1 (295-372)||(1926754-1926830)
chr1 (295-372)||(16376774-16376850)
chr1 (295-372)||(20925768-20925844)
chr1 (295-372)||(52634312-52634388)
chr1 (297-372)||(33796077-33796151)
chr1 (7-99)||(1009590-1009683)
chr1 (7-99)||(1926299-1926392)
chr1 (7-99)||(16376550-16376643)
chr1 (7-99)||(20925313-20925406)
chr1 (7-99)||(52634676-52634769)
chr1 (9-94)||(33796415-33796501)
chr1 (294-372)||(22132058-22132133)
chr1 (28-113)||(41801085-41801171)
chr1 (28-116)||(20229941-20230031)
chr1 (319-372)||(20230120-20230173)
chr1 (293-372)||(21406297-21406373)
chr1 (28-116)||(33796288-33796377)
chr1 (54-116)||(28195092-28195156)
chr1 (294-372)||(41801238-41801313)
chr1 (55-116)||(35982326-35982389)
chr1 (55-116)||(41801079-41801142)
chr1 (27-99)||(21406535-21406608)
chr1 (28-99)||(33796273-33796344)
chr1 (28-94)||(28195099-28195166)
chr1 (55-117)||(33796320-33796383)
chr1 (28-94)||(35982332-35982399)
chr1 (56-116)||(21740466-21740528)
chr1 (58-116)||(20229938-20229998)
chr1 (46-116)||(20315606-20315678)
chr1 (28-116)||(20315794-20315880)
chr1 (46-116)||(39244866-39244938)
chr1 (46-116)||(39248421-39248493)
chr1 (46-116)||(41389314-41389386)
chr1 (37-113)||(12271028-12271107)
chr1 (56-116)||(41306224-41306286)
chr1 (61-116)||(21406550-21406607)
chr1 (9-90)||(41389547-41389627)
chr1 (41-84)||(21740484-21740528)
chr1 (9-81)||(39245099-39245170)
chr1 (9-81)||(39248654-39248725)
chr1 (55-116)||(22131828-22131891)
chr1 (55-112)||(22131897-22131956)
chr1 (66-116)||(33796425-33796476)
chr1 (41-99)||(41306242-41306300)
chr1 (46-116)||(20315826-20315895)
chr1 (28-116)||(21740341-21740430)
chr1 (56-116)||(21740401-21740463)
chr1 (41-117)||(21740419-21740496)
chr1 (38-91)||(39244891-39244945)
chr1 (38-91)||(39248446-39248500)
chr1 (28-116)||(41306262-41306351)
chr1 (38-91)||(41389339-41389393)
chr1 (41-116)||(41306307-41306383)
chr1 (22-81)||(12271028-12271088)
chr1 (73-116)||(20315541-20315585)
chr1 (41-84)||(20315606-20315650)
[»] scaffold0372 (3 HSPs)
scaffold0372 (295-372)||(6279-6355)
scaffold0372 (7-67)||(6165-6225)
scaffold0372 (61-99)||(6186-6225)
[»] scaffold0200 (4 HSPs)
scaffold0200 (28-116)||(11058-11148)
scaffold0200 (42-117)||(11090-11167)
scaffold0200 (28-99)||(11043-11115)
scaffold0200 (297-338)||(10834-10874)
[»] scaffold0349 (2 HSPs)
scaffold0349 (295-372)||(11095-11170)
scaffold0349 (7-99)||(11384-11477)
[»] scaffold1852 (3 HSPs)
scaffold1852 (297-372)||(781-855)
scaffold1852 (58-112)||(401-457)
scaffold1852 (28-80)||(404-457)
[»] scaffold0410 (1 HSPs)
scaffold0410 (297-372)||(14888-14962)
[»] scaffold0293 (3 HSPs)
scaffold0293 (294-372)||(21298-21374)
scaffold0293 (55-116)||(21150-21213)
scaffold0293 (28-97)||(21156-21226)
[»] scaffold0166 (3 HSPs)
scaffold0166 (304-371)||(11027-11093)
scaffold0166 (55-116)||(10728-10790)
scaffold0166 (37-99)||(10742-10805)
[»] scaffold0023 (1 HSPs)
scaffold0023 (297-372)||(11821-11895)
[»] scaffold0575 (2 HSPs)
scaffold0575 (294-372)||(6920-6995)
scaffold0575 (55-113)||(6830-6889)
[»] scaffold0486 (3 HSPs)
scaffold0486 (313-372)||(8621-8680)
scaffold0486 (28-99)||(8867-8939)
scaffold0486 (55-99)||(8900-8945)
[»] scaffold0157 (2 HSPs)
scaffold0157 (295-372)||(34089-34162)
scaffold0157 (9-99)||(33864-33958)
[»] scaffold0601 (4 HSPs)
scaffold0601 (28-116)||(8580-8670)
scaffold0601 (28-116)||(8547-8637)
scaffold0601 (28-99)||(8613-8685)
scaffold0601 (55-116)||(8541-8604)
[»] scaffold0124 (2 HSPs)
scaffold0124 (293-372)||(25526-25602)
scaffold0124 (42-112)||(25419-25491)
[»] scaffold0525 (2 HSPs)
scaffold0525 (7-99)||(5004-5097)
scaffold0525 (319-360)||(5512-5553)
[»] scaffold0327 (5 HSPs)
scaffold0327 (28-99)||(19110-19182)
scaffold0327 (28-99)||(19214-19286)
scaffold0327 (55-116)||(19125-19188)
scaffold0327 (294-372)||(18867-18942)
scaffold0327 (55-116)||(19229-19292)
[»] scaffold0141 (2 HSPs)
scaffold0141 (9-99)||(15283-15377)
scaffold0141 (297-338)||(15546-15586)
[»] scaffold0142 (3 HSPs)
scaffold0142 (294-371)||(8699-8773)
scaffold0142 (12-69)||(8445-8502)
scaffold0142 (66-101)||(8467-8502)
[»] scaffold0380 (3 HSPs)
scaffold0380 (293-372)||(4018-4094)
scaffold0380 (28-99)||(937-1009)
scaffold0380 (61-116)||(952-1009)
[»] scaffold0013 (2 HSPs)
scaffold0013 (294-372)||(74291-74366)
scaffold0013 (55-99)||(74071-74116)
[»] scaffold0116 (4 HSPs)
scaffold0116 (28-116)||(44459-44548)
scaffold0116 (41-116)||(44504-44580)
scaffold0116 (56-116)||(44421-44483)
scaffold0116 (41-116)||(44439-44515)
[»] scaffold0278 (3 HSPs)
scaffold0278 (41-116)||(6928-7004)
scaffold0278 (37-116)||(6960-7040)
scaffold0278 (56-116)||(7025-7087)
[»] scaffold0109 (1 HSPs)
scaffold0109 (319-372)||(37179-37232)
[»] scaffold0043 (2 HSPs)
scaffold0043 (41-116)||(9037-9113)
scaffold0043 (28-116)||(9005-9093)
[»] scaffold0299 (3 HSPs)
scaffold0299 (28-99)||(6035-6107)
scaffold0299 (322-372)||(5869-5917)
scaffold0299 (55-116)||(6050-6113)
[»] scaffold1873 (1 HSPs)
scaffold1873 (293-365)||(683-753)
[»] scaffold0031 (3 HSPs)
scaffold0031 (55-116)||(37050-37112)
scaffold0031 (294-372)||(37161-37237)
scaffold0031 (28-89)||(37056-37117)
[»] scaffold0004 (4 HSPs)
scaffold0004 (43-116)||(362022-362096)
scaffold0004 (28-116)||(362185-362274)
scaffold0004 (56-116)||(362152-362214)
scaffold0004 (18-116)||(362119-362218)
[»] scaffold0484 (1 HSPs)
scaffold0484 (12-65)||(76-129)
[»] scaffold0165 (4 HSPs)
scaffold0165 (12-114)||(2917-3024)
scaffold0165 (12-114)||(6980-7087)
scaffold0165 (55-112)||(2886-2945)
scaffold0165 (55-112)||(6949-7008)
[»] scaffold0076 (2 HSPs)
scaffold0076 (28-113)||(26790-26879)
scaffold0076 (37-113)||(26833-26913)
[»] scaffold0080 (2 HSPs)
scaffold0080 (328-372)||(28516-28560)
scaffold0080 (328-372)||(33981-34025)
[»] scaffold0056 (2 HSPs)
scaffold0056 (41-113)||(79884-79957)
scaffold0056 (73-116)||(79884-79928)
[»] scaffold0561 (1 HSPs)
scaffold0561 (37-92)||(10109-10166)
[»] scaffold0017 (1 HSPs)
scaffold0017 (56-113)||(8528-8588)


Alignment Details
Target: chr7 (Bit Score: 99; Significance: 9e-49; HSPs: 86)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 7 - 117
Target Start/End: Complemental strand, 18278403 - 18278293
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatattttataagatgatgaatacgttgttgttatattttataag 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  18278403 tttggtgttagtatgtgttgattatatttatataagatgatgaatacgttgttgctatatcttataagatgatgaatacgttgttgttatattttataag 18278304  T
Q  107 atgatgaatac 117  Q
    |||||||||||    
T  18278303 atgatgaatac 18278293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 7 - 117
Target Start/End: Complemental strand, 18282366 - 18282256
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatattttataagatgatgaatacgttgttgttatattttataag 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18282366 tttggtgttagtatgtgttgattatatttatataagatgatgaatacgtcgttgctatattttataagatgatgaatacgttgttgttatattttataag 18282267  T
Q  107 atgatgaatac 117  Q
    |||||||||||    
T  18282266 atgatgaatac 18282256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 31845 - 31769
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31845 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 31769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 2833167 - 2833256
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatattttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  2833167 ttatatttttataagatgatgaatatgttgttgttatattttataagatgatgaatacgttgttgttatattattataagaagatgaata 2833256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 12706081 - 12706157
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12706081 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 12706157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 12713660 - 12713584
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12713660 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 12713584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 12717407 - 12717331
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12717407 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 12717331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 12722318 - 12722242
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12722318 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 12722242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 16908468 - 16908544
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16908468 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 16908544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 18278114 - 18278038
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  18278114 gatgattatattgtgttgttttaaa-gttattagtgatgatgattgcatgatgatatctatgagttgttaagtgtact 18278038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 18282078 - 18282002
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18282078 gatgattatattgtgttgttttaaa-gtttttagtgatgatgattacatgatgatatctatgagttgttaagtgtact 18282002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 2833442 - 2833516
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2833442 tgattacattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 2833516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 15083344 - 15083270
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15083344 tgattacattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 15083270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 32069 - 31976
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  32069 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 31976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 12713884 - 12713791
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  12713884 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 12713791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 12717708 - 12717615
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  12717708 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 12717615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 12722619 - 12722526
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  12722619 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 12722526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 18278341 - 18278261
Alignment:
Q  37 tataagatgatgaatacattgttgttatattttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||  ||||||| ||||||||    
T  18278341 tataagatgatgaatacgttgttgttatattttataagatgatgaatacattgttgttatattaatataagaagatgaata 18278261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 18282304 - 18282224
Alignment:
Q  37 tataagatgatgaatacattgttgttatattttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||  ||||||| ||||||||    
T  18282304 tataagatgatgaatacgttgttgttatattttataagatgatgaatacattgttgttatattaatataagaagatgaata 18282224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 372
Target Start/End: Original strand, 25928330 - 25928406
Alignment:
Q  294 tgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  25928330 tgatgattatattgtgttgttt--aaagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 25928406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 294 - 372
Target Start/End: Complemental strand, 20486861 - 20486786
Alignment:
Q  294 tgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  20486861 tgatgattatattgtgttgttt---aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 20486786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 2833161 - 2833224
Alignment:
Q  55 ttgttgttatatttt-ataagatgatgaatacgttgttgttatattttataagatgatgaatac 117  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2833161 ttgttgttatatttttataagatgatgaatatgttgttgttatattttataagatgatgaatac 2833224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 39721314 - 39721240
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||| ||||||    
T  39721314 tgattacattgtgttgttttaaa-gttattagtaatgatgattacatgatgatatctatgagttgttaaatgtact 39721240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 71968 - 72053
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatattttataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||   ||||||||    |||||||| |||||||| ||||||||||||||    
T  71968 tttggtgttagtatgtgttgattatatttttataagatgatgaata---tgttgtta----ttataagaagatgaatatgttgttgttatatt 72053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 76077 - 76162
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatattttataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||   ||||||||    |||||||| |||||||| ||||||||||||||    
T  76077 tttggtgttagtatgtgttgattatatttttataagatgatgaata---tgttgtta----ttataagaagatgaatatgttgttgttatatt 76162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 372
Target Start/End: Original strand, 10607280 - 10607355
Alignment:
Q  294 tgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||   || |||||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  10607280 tgatgattatattgtgttgttt---aatttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 10607355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 2531293 - 2531367
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||| |||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||| || |||||||    
T  2531293 tgattacattgtgttgttttaaa-gttattagtgatgatgattatatgaagatatctatgagttgttaggtgtact 2531367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 7520176 - 7520250
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||| |||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  7520176 tgattacattgtgttgttttaaa-gttatcagtgatgatgattacatgatgttatctatgagttgttaaatgtact 7520250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 6170752 - 6170842
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  ||||||||||||||||  ||||||||||||| |||||||||||| |||| |||||||| ||||| |||||||||||||||||    
T  6170752 ttatattattataagatgatgaatatgttgttgttatattattataagatgatcaatatgttgttgtcatattattataagatgatgaata 6170842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 9752466 - 9752542
Alignment:
Q  293 gtgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||| ||||||||||||||   ||||||||||||||||| ||||||||||| ||||||||||||| ||| ||||||    
T  9752466 gtgatgatcatattgtgttgttt---aagttattagtgatgataattacatgatgttatctatgagttgttaaatgtact 9752542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 18301471 - 18301395
Alignment:
Q  293 gtgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||| ||||||||||||||||||   ||||||||||||||||||||||||||||| |||||| |||||| ||| ||||||    
T  18301471 gtgacgattatattgtgttgttt---aagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtact 18301395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 319 - 372
Target Start/End: Complemental strand, 26291254 - 26291201
Alignment:
Q  319 aagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  26291254 aagttattagtgatgatgattacatgatgttatctatgagttgttaagtgtact 26291201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 372
Target Start/End: Complemental strand, 16582540 - 16582465
Alignment:
Q  294 tgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||   || |||||||||||||||||||||||||| ||| ||||||||| ||| ||||||    
T  16582540 tgatgattatattgtgttgttt---aatttattagtgatgatgattacatgatgttatttatgagttgttaaatgtact 16582465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 18278317 - 18278246
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatattt-tataagatgatgaatacgttgttgttatatt 99  Q
    |||||||| |||||||||||||||||||||||||||||||  ||||||| |||||||| ||||||||||||||    
T  18278317 ttatattt-tataagatgatgaatacattgttgttatattaatataagaagatgaatatgttgttgttatatt 18278246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 18282280 - 18282209
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatattt-tataagatgatgaatacgttgttgttatatt 99  Q
    |||||||| |||||||||||||||||||||||||||||||  ||||||| |||||||| ||||||||||||||    
T  18282280 ttatattt-tataagatgatgaatacattgttgttatattaatataagaagatgaatatgttgttgttatatt 18282209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 45171209 - 45171303
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaata---cattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||  |||||||||||||||     ||||||||||||| ||||| || |||||||| ||||||||||||||    
T  45171209 tggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatgaatatgttgttgttatatt 45171303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 9390351 - 9390426
Alignment:
Q  43 atgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||  ||||||||||||| ||||||||||||||||| | |||||||||||| |||||||||||||||||    
T  9390351 atgatgaatatgttgttgttatattattataagatgatgaatatgatgttgttatattattataagatgatgaata 9390426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 25928182 - 25928245
Alignment:
Q  55 ttgttgttatatttt-ataagatgatgaatacgttgttgttata-ttttataagatgatgaata 116  Q
    ||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||    
T  25928182 ttgttgttatatttttataagatgatgaatatgttgttgttatatttttataagatgatgaata 25928245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 2833200 - 2833269
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttata 97  Q
    |||||||| ||||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||||    
T  2833200 ttatattt-tataagatgatgaatacgttgttgttatattattataagaagatgaatatgttgttgttata 2833269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 16582785 - 16582695
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatattt-tataagatgatgaata 116  Q
    |||||||| ||||||||| ||||||  ||||||||||||| |||||| ||||||| || ||||||||||||||| ||||||||| ||||||    
T  16582785 ttatatttctataagatggtgaatatgttgttgttatattattataaaatgatgagtatgttgttgttatatttctataagatggtgaata 16582695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 25928188 - 25928258
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttata-ttttataagatgatgaatacgttgttgttata 97  Q
    |||||||| ||||||||||||||||  ||||||||||| ||||||||||||||||||| |||||| |||||    
T  25928188 ttatatttttataagatgatgaatatgttgttgttatatttttataagatgatgaatatgttgttattata 25928258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 26291428 - 26291338
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||  |||||||||||||||| |||||||||||||  |||||||  ||||||| |||||||||||||| |||||| ||||||||||    
T  26291428 ttatattttcataagatgatgaatacgttgttgttatattaatataagaaaatgaatatgttgttgttatattattataaaatgatgaata 26291338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 114
Target Start/End: Original strand, 6170785 - 6170873
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaa 114  Q
    |||||||  ||||||||||| ||||  ||||||| ||||| ||||||||||||||||| |||||||| ||||| |||||||||||||||    
T  6170785 ttatattattataagatgatcaatatgttgttgtcatattattataagatgatgaatatgttgttgtcatattattataagatgatgaa 6170873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 6170746 - 6170809
Alignment:
Q  55 ttgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  6170746 ttgttgttatattattataagatgatgaatatgttgttgttatattattataagatgatcaata 6170809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 1859979 - 1860056
Alignment:
Q  293 gtgatgattatattgtgttgttttaaaagttattagtga-tgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||||||||||   ||||||||||||| ||||||||||| |||| ||| ||||||||| ||| ||||||    
T  1859979 gtgatgattatattgtgttgttt---aagttattagtgattgatgattacaggatgttatatatgagttgttaaatgtact 1860056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 13919370 - 13919447
Alignment:
Q  293 gtgatgattatattgtgttgttttaaaagttattagtga-tgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||||||||||   ||||||||||||| ||||||||||| |||| ||| ||||||||| ||| ||||||    
T  13919370 gtgatgattatattgtgttgttt---aagttattagtgattgatgattacaggatgttatatatgagttgttaaatgtact 13919447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 14270709 - 14270798
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  ||||||||||||||||  | ||||||||||| | || |||||||||||| |||||||||||||| |||||||||||||||||    
T  14270709 ttatattattataagatgatgaatatgt-gttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatgaata 14270798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 16582719 - 16582630
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||| ||||||||| ||||||  ||||||||||||| ||||||||||||||||| | ||||||| |||| |||||||| ||||||||    
T  16582719 ttatatttctataagatggtgaatatgttgttgttatattattataagatgatgaatatg-tgttgttgtattattataagacgatgaata 16582630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 17231945 - 17231856
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  ||||||||||||||||  | ||||||||||| | || |||||||||||| |||||||||||||| |||||||||||||||||    
T  17231945 ttatattattataagatgatgaatatgt-gttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatgaata 17231856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 17232010 - 17231921
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  ||||||||||||||||  | ||||||||||| | || |||||||||||| |||||||||||||| |||||||||||||||||    
T  17232010 ttatattattataagatgatgaatatgt-gttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatgaata 17231921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 17232075 - 17231986
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  ||||||||||||||||  | ||||||||||| | || |||||||||||| |||||||||||||| |||||||||||||||||    
T  17232075 ttatattattataagatgatgaatatgt-gttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatgaata 17231986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 17231900 - 17231824
Alignment:
Q  41 agatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||  ||||||||||||| ||||||||||||||||| || |||||| |||| |||||||||||||||||    
T  17231900 agatgatgaatatgttgttgttatattattataagatgatgaatatgt-gttgttgtattattataagatgatgaata 17231824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 12705813 - 12705873
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt 67  Q
    |||||||||||||||||||||||||||||  |||| | ||||||||  |||||||||||||    
T  12705813 tttggtgttagtatgtgttgattatattttcataaaaagatgaatatgttgttgttatatt 12705873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 18424775 - 18424703
Alignment:
Q  46 atgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  |||||||||| |||| |||||||||||||||||||||||||||||| ||||||  |||||||||    
T  18424775 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttgttatattattataaagtgatgaata 18424703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 338
Target Start/End: Original strand, 72341 - 72383
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  72341 gatgattatattgtgttgtttt-aaagttattagtgatgatgat 72383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 338
Target Start/End: Original strand, 76450 - 76492
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  76450 gatgattatattgtgttgtttt-aaagttattagtgatgatgat 76492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 9390369 - 9390436
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgtt 94  Q
    |||||||  ||||||||||||||||   |||||||||||| ||||||||||||||||| |||||||||    
T  9390369 ttatattattataagatgatgaatatgatgttgttatattattataagatgatgaatatgttgttgtt 9390436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 113
Target Start/End: Complemental strand, 15112431 - 15112352
Alignment:
Q  37 tataagatgatgaatacattgttg-ttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatga 113  Q
    ||||||||||| ||||  |||||| ||||||| ||||||||||||||||| |||||||||||||| |||| |||||||||    
T  15112431 tataagatgattaatatgttgttgcttatattattataagatgatgaatatgttgttgttatattattatgagatgatga 15112352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 113
Target Start/End: Complemental strand, 15116003 - 15115924
Alignment:
Q  37 tataagatgatgaatacattgttg-ttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatga 113  Q
    ||||||||||| ||||  |||||| ||||||| ||||||||||||||||| |||||||||||||| |||| |||||||||    
T  15116003 tataagatgattaatatgttgttgcttatattattataagatgatgaatatgttgttgttatattattatgagatgatga 15115924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 20486972 - 20486910
Alignment:
Q  55 ttgttgttatatttt-ataagatgatgaatacgttgttgttatatttt-ataagatgatgaata 116  Q
    ||||||||||||||| ||||||||||||||| |||||||| ||||||| |||||||||||||||    
T  20486972 ttgttgttatatttttataagatgatgaatatgttgttgt-atatttttataagatgatgaata 20486910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 325 - 372
Target Start/End: Original strand, 39268301 - 39268348
Alignment:
Q  325 ttagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  39268301 ttagtgatgatgattacatgatgttatctatgagttgttaaatgtact 39268348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 8467905 - 8467832
Alignment:
Q  41 agatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatga 113  Q
    ||||||||||||  ||||||||||||| ||||||||||||||||| | ||||||| |||| ||||||||||||||    
T  8467905 agatgatgaatatgttgttgttatattattataagatgatgaatatg-tgttgttgtattattataagatgatga 8467832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 20486966 - 20486897
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttata 97  Q
    |||||||| ||||||||||||||||  ||||||| ||||||| ||||||||||||||| |||||| |||||    
T  20486966 ttatatttttataagatgatgaatatgttgttgt-atatttttataagatgatgaatatgttgttattata 20486897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 26291431 - 26291389
Alignment:
Q  58 ttgttatatttt-ataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  26291431 ttgttatattttcataagatgatgaatacgttgttgttatatt 26291389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 2531044 - 2531089
Alignment:
Q  55 ttgttgttatatttt-ataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||    
T  2531044 ttgttgttatattttcataagatgatgattacgttgttgttatatt 2531089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 10607135 - 10607196
Alignment:
Q  30 atatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgt 90  Q
    |||||| ||||||||||||||||  ||||||||||||| |||||| |||||||||| |||||    
T  10607135 atatttctataagatgatgaatatgttgttgttatattattataaaatgatgaatatgttgt 10607196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 14270689 - 14270765
Alignment:
Q  41 agatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||  ||||||||||||| ||||||||||||||||| | |||||||||||| | || ||||||||||||    
T  14270689 agatgatgaatattttgttgttatattattataagatgatgaatatg-tgttgttatattatgatgagatgatgaata 14270765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 17232095 - 17232019
Alignment:
Q  41 agatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||  ||||||||||||| ||||||||||||||||| | |||||||||||| | || ||||||||||||    
T  17232095 agatgatgaatatgttgttgttatattattataagatgatgaatatg-tgttgttatattatgatgagatgatgaata 17232019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 18424428 - 18424348
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatattttataagatgatgaatacgttgt 90  Q
    ||||||||||| |||||| ||||||| |||||| ||||| ||||  |||||||||||| ||||||| |||||| || |||||    
T  18424428 tggtgttagtacgtgttg-ttatattaatataaaatgataaatatgttgttgttatatattataaggtgatgattatgttgt 18424348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 2531050 - 2531122
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||  |||||||||||| ||| |||||||||||||  ||||||| |||||| | ||||||||||||||    
T  2531050 ttatattttcataagatgatgattacgttgttgttatattaatataagaagatgaacatgttgttgttatatt 2531122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 116
Target Start/End: Complemental strand, 8467905 - 8467861
Alignment:
Q  73 agatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  8467905 agatgatgaatatgttgttgttatattattataagatgatgaata 8467861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 116
Target Start/End: Original strand, 10607142 - 10607190
Alignment:
Q  69 tataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||||||||||| |||||||||||||| |||||| ||||||||||    
T  10607142 tataagatgatgaatatgttgttgttatattattataaaatgatgaata 10607190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 372
Target Start/End: Complemental strand, 11660370 - 11660326
Alignment:
Q  328 gtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||||    
T  11660370 gtgatgatgattacatgatgttatctatgagttgttaaatgtact 11660326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 372
Target Start/End: Complemental strand, 13891718 - 13891674
Alignment:
Q  328 gtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||||    
T  13891718 gtgatgatgattacatgatgttatctatgagttgttaaatgtact 13891674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 18424662 - 18424590
Alignment:
Q  46 atgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  |||||| ||| |||| |||||||||||||||||||||||||||||| ||||||  |||||||||    
T  18424662 atgaatatgttgttgctatgttttcataagatgatgaatacgttgttgttatattattataaagtgatgaata 18424590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 6170827 - 6170885
Alignment:
Q  37 tataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgtt 94  Q
    ||||||||||||||||  ||||||| ||||| ||||||||||||||| | |||||||||    
T  6170827 tataagatgatgaatatgttgttgtcatattattataagatgatgaacatgttgttgtt 6170885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 9752345 - 9752431
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatg 112  Q
    |||||||  |||| |||||||||||  |||||||||||||  |||| ||| ||||||| |||||||||||||| |||| ||||||||    
T  9752345 ttatattattatatgatgatgaatatgttgttgttatattactatatgattatgaatatgttgttgttatattattatgagatgatg 9752431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 18424637 - 18424583
Alignment:
Q  38 ataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgtt 91  Q
    |||||||||||||||| ||||||||||||| ||||||  ||||||||| ||||||    
T  18424637 ataagatgatgaatacgttgttgttatattattataaagtgatgaatatgttgtt 18424583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 9752339 - 9752384
Alignment:
Q  55 ttgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||||||| ||||| ||||||||||| ||||||||||||||    
T  9752339 ttgttgttatattattatatgatgatgaatatgttgttgttatatt 9752384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 15719634 - 15719537
Alignment:
Q  20 tgtgttgattatatttatataagatgatgaatacattgttgtt-atatt-ttataagatgatgaatacgttgttg-ttatatt-ttataagatgatga 113  Q
    ||||||| ||| |||  ||||||||||||| ||  |||||||| ||||| |||||||||||| |||| ||||||| ||||||| ||||||||||||||    
T  15719634 tgtgttgtttacattattataagatgatgattatgttgttgtttatattattataagatgataaatatgttgttgcttatattattataagatgatga 15719537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 18424750 - 18424697
Alignment:
Q  38 ataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgt 90  Q
    |||||||||||||||| ||||||||||||| ||||||  ||||||||| |||||    
T  18424750 ataagatgatgaatacgttgttgttatattattataaagtgatgaatatgttgt 18424697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Original strand, 45171472 - 45171512
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  45171472 tgattacattgtgttgttttaaa-gttattagtgatgatgat 45171512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 13892097 - 13892057
Alignment:
Q  332 tgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||| ||||||||||||| ||| ||||||    
T  13892097 tgatgattacatgatgttatctatgagttgttaaatgtact 13892057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 15112412 - 15112352
Alignment:
Q  22 tgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatga 81  Q
    ||||| |||||||  ||||||||||||||||  ||||||||||||| |||| |||||||||    
T  15112412 tgttgcttatattattataagatgatgaatatgttgttgttatattattatgagatgatga 15112352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 15115984 - 15115924
Alignment:
Q  22 tgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatga 81  Q
    ||||| |||||||  ||||||||||||||||  ||||||||||||| |||| |||||||||    
T  15115984 tgttgcttatattattataagatgatgaatatgttgttgttatattattatgagatgatga 15115924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 16998141 - 16998073
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttg-ttatatt-ttataagatgatgaatacgttgttgtt 94  Q
    |||||||  ||||||||||||||||  |||||| ||||||| |||||||||||||| || |||||||||    
T  16998141 ttatattattataagatgatgaatatgttgttgcttatattattataagatgatgattatgttgttgtt 16998073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 81; Significance: 5e-38; HSPs: 8)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 79533 - 79425
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatattttataagatgatgaatacgttgttgttatatt-ttataaga 107  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||  |||||||    
T  79533 tggtgttagtatgtgttgattatatttatgtaagatgatgaatacgttgttgttatattttataagatgatgaatacattgttgttatattaatataaga 79434  T
Q  108 tgatgaata 116  Q
     ||||||||    
T  79433 agatgaata 79425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 71 - 117
Target Start/End: Complemental strand, 79503 - 79457
Alignment:
Q  71 taagatgatgaatacgttgttgttatattttataagatgatgaatac 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  79503 taagatgatgaatacgttgttgttatattttataagatgatgaatac 79457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 79481 - 79410
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatattt-tataagatgatgaatacgttgttgttatatt 99  Q
    |||||||| |||||||||||||||||||||||||||||||  ||||||| |||||||| ||||||||||||||    
T  79481 ttatattt-tataagatgatgaatacattgttgttatattaatataagaagatgaatatgttgttgttatatt 79410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 116
Target Start/End: Original strand, 62553 - 62624
Alignment:
Q  46 atgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatattttataagatgatgaata 116  Q
    |||||||  ||||||||||||||| |||||||| ||||||||||||||||||||  ||||||| ||||||||    
T  62553 atgaatatgttgttgttatattttcataagatgttgaatacgttgttgttatataatataagaagatgaata 62624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 116
Target Start/End: Original strand, 66469 - 66540
Alignment:
Q  46 atgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatattttataagatgatgaata 116  Q
    |||||||  ||||||||||||||| |||||||| ||||||||||||||||||||  ||||||| ||||||||    
T  66469 atgaatatgttgttgttatattttcataagatgttgaatacgttgttgttatataatataagaagatgaata 66540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 372
Target Start/End: Original strand, 62821 - 62874
Alignment:
Q  319 aagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| ||||||    
T  62821 aagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtact 62874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 62568 - 62633
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatattttataagatgatgaatacgttgttgt 93  Q
    ||||||||  |||||||| ||||||| ||||||||||||  ||||||| |||||||| ||||||||    
T  62568 ttatattttcataagatgttgaatacgttgttgttatataatataagaagatgaatatgttgttgt 62633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 66484 - 66549
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatattttataagatgatgaatacgttgttgt 93  Q
    ||||||||  |||||||| ||||||| ||||||||||||  ||||||| |||||||| ||||||||    
T  66484 ttatattttcataagatgttgaatacgttgttgttatataatataagaagatgaatatgttgttgt 66549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 60283 - 60360
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  60283 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 60360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 2e-31; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 14067674 - 14067759
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttata-ttttataagatgatgaatacgttgttgt 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  14067674 tggtgtcagtatgtgttgattatatttatataagatgatgaatacgttgttgttatatttttataagatgatgaatacgttgttgt 14067759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 7108358 - 7108282
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7108358 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 7108282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 7112293 - 7112217
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7112293 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 7112217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 11068733 - 11068657
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11068733 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 11068657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 22320249 - 22320173
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22320249 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 22320173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 22335304 - 22335228
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22335304 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 22335228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 55021496 - 55021420
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  55021496 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 55021420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 11167052 - 11167128
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  11167052 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtttact 11167128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 14498067 - 14497991
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  14498067 gatgattatattgtgttgttttaaa-gttattagcgatgatgattacatgatgatatctatgagttgttaagtgtact 14497991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 15616297 - 15616221
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15616297 gatgattataatgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 15616221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 28948581 - 28948505
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  28948581 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctataagttgttaagtgtact 28948505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 5219965 - 5219891
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5219965 tgattacattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 5219891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 11853824 - 11853750
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11853824 tgattacattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 11853750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 37440641 - 37440715
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37440641 tgattacattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 37440715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 7108659 - 7108566
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  7108659 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 7108566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 7112594 - 7112501
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  7112594 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 7112501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 11166674 - 11166767
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  11166674 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaggatgaatatgttgttgttatatt 11166767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 14498368 - 14498275
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  14498368 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 14498275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 15616598 - 15616505
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  15616598 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 15616505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 22320627 - 22320534
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  22320627 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 22320534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 22335682 - 22335589
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  22335682 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 22335589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 28948805 - 28948712
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  28948805 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 28948712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 30064810 - 30064717
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  30064810 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 30064717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 55021948 - 55021855
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  55021948 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 55021855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 11069109 - 11069018
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  11069109 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 11069018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 11301626 - 11301700
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  11301626 tgattacattgtgttgttttaaa-gttattagtgatgatgattgcatgatgatatctatgagttgttaagtgtact 11301700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 14664543 - 14664469
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  14664543 tgattacattgtgttgttttaaa-gttattagtgatgatgattacataatgatatctatgagttgttaagtgtact 14664469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 14667707 - 14667633
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  14667707 tgattacattgtgttgttttaaa-gttattagtgatgatgattacatgatgagatctatgagttgttaagtgtact 14667633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 294 - 372
Target Start/End: Complemental strand, 16795622 - 16795547
Alignment:
Q  294 tgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  16795622 tgatgattatattgtgttgttt---aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 16795547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 4108385 - 4108470
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatattttataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||   ||||||||    |||||||| |||||||| ||||||||||||||    
T  4108385 tttggtgttagtatgtgttgattatatttttataagatgatgaata---tgttgtta----ttataagaagatgaatatgttgttgttatatt 4108470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 4112237 - 4112322
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatattttataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||   ||||||||    |||||||| |||||||| ||||||||||||||    
T  4112237 tttggtgttagtatgtgttgattatatttttataagatgatgaata---tgttgtta----ttataagaagatgaatatgttgttgttatatt 4112322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 296 - 372
Target Start/End: Original strand, 12853325 - 12853398
Alignment:
Q  296 atgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||   || |||||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  12853325 atgattatattgtgttgttt---aatttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 12853398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 319 - 372
Target Start/End: Original strand, 18933337 - 18933390
Alignment:
Q  319 aagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  18933337 aagttattagtgatgatgattacatgatgttatctatgagttgttaagtgtact 18933390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 319 - 372
Target Start/End: Complemental strand, 30064482 - 30064429
Alignment:
Q  319 aagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  30064482 aagttattagtgatgatgattacatgatgttatctatgagttgttaagtgtact 30064429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 15963867 - 15963773
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaata---cattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||  |||||||||||||||     ||||||||||||| ||||| || |||||||| ||||||||||||||    
T  15963867 tggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatgaatatgttgttgttatatt 15963773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 15967791 - 15967697
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaata---cattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||  |||||||||||||||     ||||||||||||| ||||| || |||||||| ||||||||||||||    
T  15967791 tggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatgaatatgttgttgttatatt 15967697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 15971715 - 15971621
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaata---cattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||  |||||||||||||||     ||||||||||||| ||||| || |||||||| ||||||||||||||    
T  15971715 tggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatgaatatgttgttgttatatt 15971621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 293 - 370
Target Start/End: Original strand, 14068021 - 14068095
Alignment:
Q  293 gtgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgta 370  Q
    |||||||||||||||||| ||||   ||||||||||||||||||||||||||||| |||||| |||||| ||| ||||    
T  14068021 gtgatgattatattgtgtagttt---aagttattagtgatgatgattacatgatgttatctaggagttgctaaatgta 14068095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 18440569 - 18440632
Alignment:
Q  55 ttgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  18440569 ttgttgttatattattataagatgatgaatatgttgttgttatattattataagatgatgaata 18440632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 19485643 - 19485706
Alignment:
Q  55 ttgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  19485643 ttgttgttatattattataagatgatgaatatgttgttgttatattattataagatgatgaata 19485706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 14067693 - 14067751
Alignment:
Q  61 ttatattt-tataagatgatgaatacgttgttgttata-ttttataagatgatgaatac 117  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14067693 ttatatttatataagatgatgaatacgttgttgttatatttttataagatgatgaatac 14067751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 4589893 - 4589954
Alignment:
Q  38 ataagatgatgaatacattgttgttatattttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||| ||||||||||||  ||||||| |||||||| ||||||||||||||    
T  4589893 ataagatgatgaatacgttgttgttatataatataagaagatgaatatgttgttgttatatt 4589954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 4590119 - 4590195
Alignment:
Q  293 gtgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||| ||||||||||||| ||||   ||||||||||||||||||||||||||||| |||||| |||||| ||| ||||||    
T  4590119 gtgacgattatattgtgtagttt---aagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtact 4590195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 11301386 - 11301455
Alignment:
Q  31 tatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    ||||| ||||||||||||||||| |||||||||||||  ||||||| |||||||| ||||||||||||||    
T  11301386 tatttttataagatgatgaatacgttgttgttatattaatataagaagatgaatatgttgttgttatatt 11301455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 14664789 - 14664717
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||| ||||||||||||||||| || ||||||||||  ||||||| |||||||| ||||||||||||||    
T  14664789 ttatatttttataagatgatgaatacgtttttgttatattaatataagaagatgaatatgttgttgttatatt 14664717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 14667953 - 14667881
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||| ||||||||||||||||  |||||||||||||  ||||||| |||||||| ||||||||||||||    
T  14667953 ttatatttttataagatgatgaatatgttgttgttatattaatataagaagatgaatatgttgttgttatatt 14667881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 116
Target Start/End: Original strand, 4589868 - 4589939
Alignment:
Q  46 atgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatattttataagatgatgaata 116  Q
    |||||||  ||||||| ||||||| |||||||||||||||||||||||||||||  ||||||| ||||||||    
T  4589868 atgaatatgttgttgtgatattttcataagatgatgaatacgttgttgttatataatataagaagatgaata 4589939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 18440491 - 18440554
Alignment:
Q  55 ttgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||| ||||||||||||||||| ||||||| |||||| |||||||||||||||||    
T  18440491 ttgttgttatattattataagatgatgaatatgttgttgctatattattataagatgatgaata 18440554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 18440575 - 18440642
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgtt 94  Q
    |||||||  ||||||||||||||||  ||||||||||||| ||||||||||||||||| |||||||||    
T  18440575 ttatattattataagatgatgaatatgttgttgttatattattataagatgatgaataagttgttgtt 18440642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 19485565 - 19485628
Alignment:
Q  55 ttgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||| ||||||||||||||||| ||||||| |||||| |||||||||||||||||    
T  19485565 ttgttgttatattattataagatgatgaatatgttgttgctatattattataagatgatgaata 19485628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 19485649 - 19485716
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgtt 94  Q
    |||||||  ||||||||||||||||  ||||||||||||| ||||||||||||||||| |||||||||    
T  19485649 ttatattattataagatgatgaatatgttgttgttatattattataagatgatgaataagttgttgtt 19485716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 294 - 372
Target Start/End: Complemental strand, 14670142 - 14670070
Alignment:
Q  294 tgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||   |||||||||||||||||   ||||||||| ||||||||||||| ||| ||||||    
T  14670142 tgatgattatattgtgttgttt---aagttattagtgatgat---tacatgatgttatctatgagttgttaaatgtact 14670070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 15463999 - 15463922
Alignment:
Q  293 gtgatgattatattgtgttgttttaaaagttattagtga-tgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||||||||||   ||||||||||||| ||||||||||| |||| ||| ||||||||| ||| ||||||    
T  15463999 gtgatgattatattgtgttgttt---aagttattagtgattgatgattacaggatgttatatatgagttgttaaatgtact 15463922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 17318468 - 17318544
Alignment:
Q  293 gtgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||||| ||||   ||||||||||||||||||| ||||||| | |||||| |||||| ||| ||||||    
T  17318468 gtgatgattatattgtgtagttt---aagttattagtgatgatgaatacatgaagttatctaggagttgttaaatgtact 17318544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 49390328 - 49390377
Alignment:
Q  68 ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  49390328 ttataagatgatgaatatgttgttgttatattattataagatgatgaata 49390377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 49390329 - 49390386
Alignment:
Q  37 tataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgt 93  Q
    ||||||||||||||||  ||||||||||||| ||||||||||||||||| ||||||||    
T  49390329 tataagatgatgaatatgttgttgttatattattataagatgatgaatatgttgttgt 49390386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 12338906 - 12338834
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||  |||||| ||||||||  ||||||||||||||| |||||| |||||||| ||||||||||||||    
T  12338906 ttatattttcataagaagatgaatatgttgttgttatattttcataagaagatgaatatgttgttgttatatt 12338834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 46 - 116
Target Start/End: Original strand, 16751555 - 16751627
Alignment:
Q  46 atgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  |||||||||| |||| |||||||||||||||||||||||||||||| ||||||  |||||||||    
T  16751555 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttgttatattattataaagtgatgaata 16751627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 19774609 - 19774537
Alignment:
Q  46 atgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  |||||||||| |||| |||||||||||||||||||||||||||||| ||||||  |||||||||    
T  19774609 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttgttatattattataaagtgatgaata 19774537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 338
Target Start/End: Original strand, 4112607 - 4112649
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  4112607 gatgattatattgtgttgtttt-aaagttattagtgatgatgat 4112649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 11301389 - 11301440
Alignment:
Q  66 ttttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  11301389 ttttataagatgatgaatacgttgttgttatattaatataagaagatgaata 11301440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 322 - 372
Target Start/End: Complemental strand, 12337348 - 12337300
Alignment:
Q  322 ttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||||||    
T  12337348 ttattagtgatgatgattacatgatgata--tatgagttgttaagtgtact 12337300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 12338912 - 12338849
Alignment:
Q  55 ttgttgttatatttt-ataagatgatgaatacgttgttgttatatttt-ataagatgatgaata 116  Q
    ||||||||||||||| |||||| |||||||| |||||||||||||||| |||||| ||||||||    
T  12338912 ttgttgttatattttcataagaagatgaatatgttgttgttatattttcataagaagatgaata 12338849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 14664795 - 14664732
Alignment:
Q  55 ttgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||  ||||||| ||||||||    
T  14664795 ttgttgttatatttttataagatgatgaatacgtttttgttatattaatataagaagatgaata 14664732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 14667959 - 14667896
Alignment:
Q  55 ttgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||  ||||||| ||||||||    
T  14667959 ttgttgttatatttttataagatgatgaatatgttgttgttatattaatataagaagatgaata 14667896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 338
Target Start/End: Original strand, 4108759 - 4108800
Alignment:
Q  296 atgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  4108759 atgattatattgtgttgtttt-aaagttattagtgatgatgat 4108800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 12853049 - 12853106
Alignment:
Q  43 atgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||||  ||||||||||||| |||||| |||||||||| ||||||||||||||    
T  12853049 atgatgaatatgttgttgttatattattataaaatgatgaatatgttgttgttatatt 12853106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 16751788 - 16751868
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatattttataagatgatgaatacgttgt 90  Q
    ||||||||||| |||||| ||||||| |||||| ||||| ||||  |||||||||||| ||||||| |||||| || |||||    
T  16751788 tggtgttagtacgtgttg-ttatattaatataaaatgataaatatgttgttgttatatattataaggtgatgattatgttgt 16751868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 18440497 - 18440564
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgtt 94  Q
    |||||||  ||||||||||||||||  |||||| |||||| ||||||||||||||||| ||| |||||    
T  18440497 ttatattattataagatgatgaatatgttgttgctatattattataagatgatgaatatgttattgtt 18440564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 19485571 - 19485638
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgtt 94  Q
    |||||||  ||||||||||||||||  |||||| |||||| ||||||||||||||||| ||| |||||    
T  19485571 ttatattattataagatgatgaatatgttgttgctatattattataagatgatgaatatgttattgtt 19485638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 16751580 - 16751634
Alignment:
Q  38 ataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgtt 91  Q
    |||||||||||||||| ||||||||||||| ||||||  ||||||||| ||||||    
T  16751580 ataagatgatgaatacgttgttgttatattattataaagtgatgaatatgttgtt 16751634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 19774584 - 19774530
Alignment:
Q  38 ataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgtt 91  Q
    |||||||||||||||| ||||||||||||| ||||||  ||||||||| ||||||    
T  19774584 ataagatgatgaatacgttgttgttatattattataaagtgatgaatatgttgtt 19774530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 372
Target Start/End: Original strand, 10834935 - 10834976
Alignment:
Q  331 atgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||| ||||||||||||| ||| ||||||    
T  10834935 atgatgattacatgatgttatctatgagttgttaaatgtact 10834976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 15963604 - 15963564
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  15963604 tgattacattgtgttgttttaaa-gttattagtgatgatgat 15963564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 15967528 - 15967488
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  15967528 tgattacattgtgttgttttaaa-gttattagtgatgatgat 15967488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 15971452 - 15971412
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  15971452 tgattacattgtgttgttttaaa-gttattagtgatgatgat 15971412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 19774391 - 19774311
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatattttataagatgatgaatacgttgt 90  Q
    ||||||||||| |||||| ||||||| |||||| ||||| ||||  ||| || ||||| |||||||||||||| || |||||    
T  19774391 tggtgttagtacgtgttg-ttatattaatataaaatgataaatatgttgctgatatatattataagatgatgattatgttgt 19774311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 8928858 - 8928902
Alignment:
Q  328 gtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||| ||||||| ||||||||||||| ||| ||||||    
T  8928858 gtgatgatgattgcatgatgttatctatgagttgttaaatgtact 8928902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 328 - 372
Target Start/End: Complemental strand, 13435906 - 13435862
Alignment:
Q  328 gtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||||||| ||| ||||||||| ||| ||||||    
T  13435906 gtgatgatgattacatgatgttatatatgagttgttaaatgtact 13435862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 68514 - 68590
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  68514 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 68590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 68326 - 68386
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt 67  Q
    |||||||||||||||||||||||||||||  |||||||||||||||  |||||||||||||    
T  68326 tttggtgttagtatgtgttgattatattttcataagatgatgaatatgttgttgttatatt 68386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 4e-29; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 21974142 - 21974218
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21974142 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 21974218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 21978252 - 21978328
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21978252 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 21978328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 43250322 - 43250246
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  43250322 gatgattatattgtgttgttttaaa-gttattaatgatgatgattacatgatgatatctatgagttgttaagtgtact 43250246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 14399053 - 14399127
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14399053 tgattacattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 14399127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 21410019 - 21409945
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21410019 tgattacattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 21409945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 21804511 - 21804437
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21804511 tgattacattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 21804437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 21973687 - 21973780
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  21973687 tttggtgttagtatgtgttgattatattttcataagatgatgaataccttgttgttatattaatacaagaagatgaatatgttgttgttatatt 21973780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 22111011 - 22110918
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  22111011 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 22110918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 43250771 - 43250678
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  43250771 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 43250678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 21829137 - 21829222
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatattttataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||   ||||||||    |||||||| |||||||| ||||||||||||||    
T  21829137 tttggtgttagtatgtgttgattatatttttataagatgatgaata---tgttgtta----ttataagaagatgaatatgttgttgttatatt 21829222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 21977778 - 21977838
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt 67  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||    
T  21977778 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatatt 21977838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 372
Target Start/End: Complemental strand, 23427945 - 23427870
Alignment:
Q  294 tgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||||||| |   ||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  23427945 tgatgattatattgtgttgtct---aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 23427870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 372
Target Start/End: Complemental strand, 23913384 - 23913309
Alignment:
Q  294 tgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||||||||| ||||||| ||||| ||| ||||||    
T  23913384 tgatgattatattgtgttgttt---aagttattagtgatgatgattacatgatgttatctataagttgttaaatgtact 23913309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 372
Target Start/End: Original strand, 44385793 - 44385868
Alignment:
Q  294 tgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||   ||||| ||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  44385793 tgatgattatattgtgttgttt---aagttgttagtgatgatgattacatgatgttatctatgagttgttaaatgtact 44385868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 20983486 - 20983567
Alignment:
Q  37 tataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||||||  ||||||||||||| ||||||||||| ||||| |||| ||||||||| |||||||||||||||||    
T  20983486 tataagatgatgaatatgttgttgttatattattataagatgaggaatatgttgatgttatattattataagatgatgaata 20983567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 21386279 - 21386203
Alignment:
Q  293 gtgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||||| ||||   ||||||||||||||||||||||||||||| |||||| |||||| ||| ||||||    
T  21386279 gtgatgattatattgtgtagttt---aagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtact 21386203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 30941273 - 30941367
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaata---cattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||  |||||||||||||||     ||||||||||||| ||||| || |||||||| ||||||||||||||    
T  30941273 tggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatgaatatgttgttgttatatt 30941367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 18863813 - 18863907
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaata---cattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||  |||||||||||||||     ||||||||||||| ||||| || ||||||||  |||||||||||||    
T  18863813 tggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatgaatatattgttgttatatt 18863907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 20983510 - 20983600
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  |||||||||| |||||  ||| ||||||||| ||||||||||||||||| ||||| |||||||| |||||||||||| ||||    
T  20983510 ttatattattataagatgaggaatatgttgatgttatattattataagatgatgaatatgttgtggttatattattataagatgataaata 20983600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 38550622 - 38550684
Alignment:
Q  56 tgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||||||||| || |||||||||||| |||||||||||||| |||||||||||||||||    
T  38550622 tgttgttatattttgatgagatgatgaatatgttgttgttatattattataagatgatgaata 38550684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 38550705 - 38550781
Alignment:
Q  41 agatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||  ||||||||||||| ||||||||||||||||| || |||||| |||| |||||||||||||||||    
T  38550705 agatgatgaatatgttgttgttatattattataagatgatgaatatgt-gttgttgtattattataagatgatgaata 38550781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 338
Target Start/End: Original strand, 21829430 - 21829472
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  21829430 gatgattatattgtgttgtttt-aaagttattagtgatgatgat 21829472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 15924294 - 15924336
Alignment:
Q  58 ttgttatatttt-ataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  15924294 ttgttatattttcataagatgatgaatacgttgttgttatatt 15924336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 38550660 - 38550749
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  ||||||||||||||||  | |||||| |||| | || |||||||||||| |||||||||||||| |||||||||||||||||    
T  38550660 ttatattattataagatgatgaatatgt-gttgttgtattatgatgagatgatgaatatgttgttgttatattattataagatgatgaata 38550749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 20983485 - 20983534
Alignment:
Q  68 ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||||||| |||||||||||||| ||||||||||| |||||    
T  20983485 ttataagatgatgaatatgttgttgttatattattataagatgaggaata 20983534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 38550618 - 38550716
Alignment:
Q  18 tatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaat 115  Q
    ||||||||| ||||||||  || ||||||||||||  ||||||||||||| ||||||||||||||||| | ||||||| |||| | || |||||||||||    
T  38550618 tatgtgttg-ttatattttgatgagatgatgaatatgttgttgttatattattataagatgatgaatatg-tgttgttgtattatgatgagatgatgaat 38550715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 99
Target Start/End: Original strand, 21977799 - 21977838
Alignment:
Q  61 ttatatttt-ataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  21977799 ttatattttcataagatgatgaatacgttgttgttatatt 21977838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 338
Target Start/End: Complemental strand, 22110710 - 22110668
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    |||||||||||| |||||||||||| ||||||||||||||||||    
T  22110710 gatgattatattatgttgttttaaa-gttattagtgatgatgat 22110668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 115
Target Start/End: Original strand, 1323734 - 1323807
Alignment:
Q  43 atgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaat 115  Q
    ||||||||||  ||||||||||||| ||||||||||||||||| | |||||||||||| | || |||||||||||    
T  1323734 atgatgaatatgttgttgttatattattataagatgatgaatatg-tgttgttatattatgatgagatgatgaat 1323807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 1323734 - 1323776
Alignment:
Q  75 atgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  1323734 atgatgaatatgttgttgttatattattataagatgatgaata 1323776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 1323752 - 1323841
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  ||||||||||||||||   |||||||||||| | || |||||||||||  ||||||| |||||| |||||||||||||||||    
T  1323752 ttatattattataagatgatgaata-tgtgttgttatattatgatgagatgatgaatttgttgttgctatattattataagatgatgaata 1323841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 13428679 - 13428741
Alignment:
Q  56 tgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||||||| | || |||||||||||| ||||||| |||||| |||||||||||||||||    
T  13428679 tgttgttatattatgatgagatgatgaatatgttgttgctatattattataagatgatgaata 13428741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 1323797 - 1323873
Alignment:
Q  41 agatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||||||   |||||| |||||| ||||||||||||||||| || |||||| |||| |||||||||||||||||    
T  1323797 agatgatgaatttgttgttgctatattattataagatgatgaatatgt-gttgttgtattattataagatgatgaata 1323873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 14398838 - 14398883
Alignment:
Q  55 ttgttgttatatttt-ataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||||||||| |||||| |||||||| ||||||||||||||    
T  14398838 ttgttgttatatttttataagaagatgaatatgttgttgttatatt 14398883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Original strand, 18864076 - 18864116
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  18864076 tgattacattgtgttgttttaaa-gttattagtgatgatgat 18864116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Original strand, 30941536 - 30941576
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  30941536 tgattacattgtgttgttttaaa-gttattagtgatgatgat 30941576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 20983543 - 20983607
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgtt 91  Q
    |||||||  ||||||||||||||||  |||| |||||||| |||||||||||| |||| ||||||    
T  20983543 ttatattattataagatgatgaatatgttgtggttatattattataagatgataaatatgttgtt 20983607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 23913438 - 23913379
Alignment:
Q  55 ttgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatga 113  Q
    ||||||||||||||| ||||||||||||||| ||||||| |||||| |||| |||||||||    
T  23913438 ttgttgttatatttttataagatgatgaata-gttgttgatatattattatgagatgatga 23913379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 4e-29; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 8242532 - 8242456
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8242532 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 8242456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 11565521 - 11565445
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11565521 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 11565445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 12620292 - 12620368
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12620292 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 12620368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 22861875 - 22861799
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22861875 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 22861799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 23988423 - 23988347
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23988423 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 23988347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 294 - 372
Target Start/End: Original strand, 11716898 - 11716975
Alignment:
Q  294 tgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  11716898 tgatgtttatattgtgttgttttaaa-gttattaatgatgatgattacatgatgatatctatgagttgttaagtgtact 11716975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 8242834 - 8242741
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  8242834 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 8242741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 11565822 - 11565729
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  11565822 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 11565729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 12619988 - 12620081
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  12619988 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 12620081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 23988920 - 23988827
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  23988920 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 23988827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 27555657 - 27555583
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27555657 tgattacattgagttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 27555583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 22948074 - 22947984
Alignment:
Q  10 ggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  22948074 ggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 22947984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 22952030 - 22951940
Alignment:
Q  10 ggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  22952030 ggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 22951940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 23870518 - 23870428
Alignment:
Q  10 ggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  23870518 ggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 23870428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 23874474 - 23874384
Alignment:
Q  10 ggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  23874474 ggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 23874384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 294 - 370
Target Start/End: Complemental strand, 2076405 - 2076332
Alignment:
Q  294 tgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgta 370  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||||| ||| ||||    
T  2076405 tgatgattatattgtgttgttt---aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgta 2076332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 16759197 - 16759112
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatattttataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||   ||||||||    |||||||| |||||||| ||||||||||||||    
T  16759197 tttggtgttagtatgtgttgattatatttttataagatgatgaata---tgttgtta----ttataagaagatgaatatgttgttgttatatt 16759112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 22075071 - 22075161
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttata-ttttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||| ||||||||||||||||  ||||||||||| |||||||||||||| |||| ||||||||||||||  ||||||| ||||||||    
T  22075071 ttatatttttataagatgatgaatatgttgttgttatatttttataagatgattaatangttgttgttatattaatataagaagatgaata 22075161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 22075347 - 22075425
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgattacatgatg----atatctatgagttgataagtgtact 372  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||    |||||||||||||| ||||||||||    
T  22075347 tgattacattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatatatctatgagttgttaagtgtact 22075425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 19869557 - 19869463
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaata---cattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||  |||||||||||||||     ||||||||||||| ||||| || |||||||| ||||||||||||||    
T  19869557 tggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatgaatatgttgttgttatatt 19869463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 23394011 - 23393917
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaata---cattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||  |||||||||||||||     ||||||||||||| ||||| || |||||||| ||||||||||||||    
T  23394011 tggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatgaatatgttgttgttatatt 23393917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 23413919 - 23413825
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaata---cattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||  |||||||||||||||     ||||||||||||| ||||| || |||||||| ||||||||||||||    
T  23413919 tggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatgaatatgttgttgttatatt 23413825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 46 - 116
Target Start/End: Original strand, 18918401 - 18918472
Alignment:
Q  46 atgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatattttataagatgatgaata 116  Q
    |||||||  ||||||||||||||| |||||||||||||||||||||||||||||  ||||||| ||||||||    
T  18918401 atgaatatgttgttgttatattttcataagatgatgaatacgttgttgttatataatataagaagatgaata 18918472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 14471298 - 14471240
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt 67  Q
    |||||||||||||||||||||||||| |||||||| ||||||||  |||||||||||||    
T  14471298 tggtgttagtatgtgttgattatattaatataagaagatgaatatgttgttgttatatt 14471240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 18918539 - 18918615
Alignment:
Q  293 gtgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||| | ||||   ||||||||||||||||||||||||||||| |||||| |||||| ||| ||||||    
T  18918539 gtgatgattatattgtatagttt---aagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtact 18918615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 319 - 372
Target Start/End: Complemental strand, 23400775 - 23400722
Alignment:
Q  319 aagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  23400775 aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 23400722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 22075065 - 22075128
Alignment:
Q  55 ttgttgttatatttt-ataagatgatgaatacgttgttgttata-ttttataagatgatgaata 116  Q
    ||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||| ||||    
T  22075065 ttgttgttatatttttataagatgatgaatatgttgttgttatatttttataagatgattaata 22075128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 18918416 - 18918482
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatattttataagatgatgaatacgttgttgtt 94  Q
    ||||||||  |||||||||||||||| ||||||||||||  ||||||| |||||||| |||||||||    
T  18918416 ttatattttcataagatgatgaatacgttgttgttatataatataagaagatgaatatgttgttgtt 18918482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 14471001 - 14470925
Alignment:
Q  293 gtgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||||| ||||   |||||||||||||||| ||||| |||| ||||| ||||||||| || |||||||    
T  14471001 gtgatgattatattgtgtagttt---aagttattagtgatgaagattatatgaagatatttatgagttgttaggtgtact 14470925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 22075104 - 22075176
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatattt-tataagatgatgaatacgttgttgttatatt 99  Q
    |||||||| ||||||||||| ||||  |||||||||||||  ||||||| |||||||| ||||||||||||||    
T  22075104 ttatatttttataagatgattaatangttgttgttatattaatataagaagatgaatatgttgttgttatatt 22075176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 31479348 - 31479428
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatattttataagatgatgaatacgttgt 90  Q
    ||||||||||| |||||| ||||||| |||||| ||||| ||||  |||||||||||| |||||||||||||| || |||||    
T  31479348 tggtgttagtacgtgttg-ttatattaatataaaatgataaatatgttgttgttatatattataagatgatgattatgttgt 31479428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 347
Target Start/End: Complemental strand, 1643372 - 1643321
Alignment:
Q  293 gtgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatg 347  Q
    |||||||||||||||||| ||||   |||||||||||||||||||||||||||||    
T  1643372 gtgatgattatattgtgtagttt---aagttattagtgatgatgattacatgatg 1643321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 338
Target Start/End: Complemental strand, 22947776 - 22947734
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  22947776 gatgattatattgtgttgtttt-aaagttattagtgatgatgat 22947734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 338
Target Start/End: Complemental strand, 22951732 - 22951690
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  22951732 gatgattatattgtgttgtttt-aaagttattagtgatgatgat 22951690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 338
Target Start/End: Complemental strand, 23870220 - 23870178
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  23870220 gatgattatattgtgttgtttt-aaagttattagtgatgatgat 23870178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 338
Target Start/End: Complemental strand, 23874176 - 23874134
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  23874176 gatgattatattgtgttgtttt-aaagttattagtgatgatgat 23874134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 1643609 - 1643567
Alignment:
Q  58 ttgttatatttt-ataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  1643609 ttgttatattttcataagatgatgaatacgttgttgttatatt 1643567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 18913373 - 18913300
Alignment:
Q  44 tgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||||  ||||||||||||| ||||||||||||||||| || |||||| |||| |||||||||||||||||    
T  18913373 tgatgaatatgttgttgttatattattataagatgatgaatatgt-gttgttgtattattataagatgatgaata 18913300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 319 - 372
Target Start/End: Original strand, 18953465 - 18953518
Alignment:
Q  319 aagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||||||||||||||||  ||||| |||||| ||| ||||||    
T  18953465 aagttattagtgatgatgattacatgatgtcatctaggagttgttaaatgtact 18953518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 1643606 - 1643534
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||  |||||||||||||||| |||||||||||||  ||||||  ||||||||  |||||||||||||    
T  1643606 ttatattttcataagatgatgaatacgttgttgttatattaatataaggagatgaatatattgttgttatatt 1643534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 16623215 - 16623143
Alignment:
Q  46 atgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  |||||||||| |||| ||||||||||||||| |||||||||||||| ||||||  |||||||||    
T  16623215 atgaatatgttgttgttatgttttcataagatgatgaatatgttgttgttatattattataaagtgatgaata 16623143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 2076514 - 2076436
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatattttataagatgatgaatacgttgttgttatatt-ttataagatgatga 113  Q
    |||||||| ||||||||||||||||   ||||||||    ||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  2076514 ttatatttttataagatgatgaata---tgttgtta----ttataagatgatgaata-gttgttgatatattattataagatgatga 2076436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 338
Target Start/End: Complemental strand, 16758824 - 16758782
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    |||||||||||||||||||||| ||| |||||||||||||||||    
T  16758824 gatgattatattgtgttgtttt-aaatttattagtgatgatgat 16758782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 31479361 - 31479419
Alignment:
Q  56 tgttgttatattt-tataagatgatgaatacgttgttgttatattttataagatgatga 113  Q
    ||||||||||||  ||||| ||||| |||| ||||||||||||| ||||||||||||||    
T  31479361 tgttgttatattaatataaaatgataaatatgttgttgttatatattataagatgatga 31479419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 19869294 - 19869254
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  19869294 tgattacattgtgttgttttaaa-gttattagtgatgatgat 19869254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 23393748 - 23393708
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  23393748 tgattacattgtgttgttttaaa-gttattagtgatgatgat 23393708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 23413656 - 23413616
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  23413656 tgattacattgtgttgttttaaa-gttattagtgatgatgat 23413616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 2200886 - 2200814
Alignment:
Q  22 tgttgattatatttatataagatgatgaatacattgttg-ttatatt-ttataagatgatgaatacgttgttg 92  Q
    ||||| |||||||  ||||||||||||||||  |||||| |||| || ||||||||||||||||| |||||||    
T  2200886 tgttgtttatattattataagatgatgaatatgttgttgcttatgttattataagatgatgaatatgttgttg 2200814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 117
Target Start/End: Original strand, 18918401 - 18918441
Alignment:
Q  78 atgaatacgttgttgttatatttt-ataagatgatgaatac 117  Q
    ||||||| |||||||||||||||| ||||||||||||||||    
T  18918401 atgaatatgttgttgttatattttcataagatgatgaatac 18918441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 22420660 - 22420596
Alignment:
Q  22 tgttgattatatttatataagatgatgaatacattgttg-ttatatt-ttataagatgatgaata 84  Q
    ||||| |||||||  |||||||||||||||| ||||||| |||| || |||||||||||||||||    
T  22420660 tgttgtttatattattataagatgatgaatatattgttgcttatgttattataagatgatgaata 22420596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 31630906 - 31630950
Alignment:
Q  41 agatgatgaatacattgttgttatatt-ttataagatgatgaata 84  Q
    |||||||||||| ||||| |||||||| |||||||||||||||||    
T  31630906 agatgatgaatatattgtcgttatattattataagatgatgaata 31630950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 4e-29; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 19474131 - 19474207
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  19474131 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 19474207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 20294634 - 20294558
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20294634 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 20294558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 18354915 - 18354841
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18354915 tgattacattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 18354841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 20294861 - 20294768
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  20294861 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 20294768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 40727067 - 40727157
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaata---cattgttgttatattttataagatgatgaatacgttgttgtt 94  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||     |||||||||||||||||||||||||| ||| |||||||||    
T  40727067 tttggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttgttgttatattttataagatgatggatatgttgttgtt 40727157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 19473832 - 19473923
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  19473832 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 19473923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 304 - 371
Target Start/End: Original strand, 24768530 - 24768596
Alignment:
Q  304 attgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtac 371  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  24768530 attgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtac 24768596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 20912211 - 20912287
Alignment:
Q  293 gtgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||| ||||||   ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  20912211 gtgatgattatattgtattgttt---aagttattagtgatgatgattacatgatgttatctatgagttgttaagtgtact 20912287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 15238076 - 15238152
Alignment:
Q  293 gtgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||||| ||||   ||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  15238076 gtgatgattatattgtgtagttt---aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 15238152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 18355132 - 18355052
Alignment:
Q  37 tataagatgatgaatacattgttgttatattttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||| ||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  18355132 tataaaatgataaatatgttgttgttatattttataagatgatgaatacgttgttgttatattaatataagaagatgaata 18355052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 372
Target Start/End: Original strand, 22108409 - 22108484
Alignment:
Q  294 tgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||| |||||||||||||   ||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  22108409 tgatgattctattgtgttgttt---aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 22108484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 18355232 - 18355143
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaatacattgttg---ttatatt-ttataagatgatgaatacgttgttgtt 94  Q
    ||||||||||||||||||||||||||| ||||||||||||||||  ||||||   ||||||| |||||| |||||||||| |||||||||    
T  18355232 tggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttgtttttatattattataaaatgatgaatatgttgttgtt 18355143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 22108157 - 22108247
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  ||||| ||||||||||  ||||||||||||||| ||||||||||||||| |||||||||||||| |||||| ||||||||||    
T  22108157 ttatattattataaaatgatgaatatgttgttgttatatttttataagatgatgaatatgttgttgttatattattataaaatgatgaata 22108247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 11219925 - 11219831
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaatacattgt---tgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||  |||||||||||||||  ||||   ||||||||| ||||| || |||||||| ||||||||||||||    
T  11219925 tggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgctgttatattattatatgaagatgaatatgttgttgttatatt 11219831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 11224511 - 11224417
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaatacattgt---tgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||  |||||||||||||||  ||||   ||||||||| ||||| || |||||||| ||||||||||||||    
T  11224511 tggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgctgttatattattatatgaagatgaatatgttgttgttatatt 11224417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 11230323 - 11230229
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaatacattgt---tgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||  |||||||||||||||  ||||   ||||||||| ||||| || |||||||| ||||||||||||||    
T  11230323 tggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgctgttatattattatatgaagatgaatatgttgttgttatatt 11230229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 11226491 - 11226433
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt 67  Q
    |||||||||||||||||||||||||||  |||||||||||||||  |||||||||||||    
T  11226491 tggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttatatt 11226433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 22120302 - 22120392
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatattt-tataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  ||||| ||||||| ||  |||||||||||||| |||||||||||||||| |||||||||||||| |||||| ||||||||||    
T  22120302 ttatattattataaaatgatgagtatgttgttgttatatttctataagatgatgaatatgttgttgttatattattataaaatgatgaata 22120392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 24768231 - 24768293
Alignment:
Q  55 ttgttgttatattttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||| |||||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  24768231 ttgttgttatactttataagatgatgaatacgttgttgttatattaatataagaagatgaata 24768293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 293 - 361
Target Start/End: Original strand, 40727358 - 40727423
Alignment:
Q  293 gtgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttg 361  Q
    |||||||||||||||||| ||||   ||||||||||||||||||||||||||| ||||||||| |||||    
T  40727358 gtgatgattatattgtgtagttt---aagttattagtgatgatgattacatgaagatatctataagttg 40727423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 11228329 - 11228239
Alignment:
Q  13 gttagtatgtgttgattatatttatataagatgatgaatacattgt---tgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||  |||||||||||||||  ||||   ||||||||| ||||| || |||||||| ||||||||||||||    
T  11228329 gttagtatgtgttgattatattttgataagatgatgaatatgttgttgctgttatattattatatgaagatgaatatgttgttgttatatt 11228239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 18355108 - 18355037
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatattt-tataagatgatgaatacgttgttgttatatt 99  Q
    |||||||| ||||||||||||||||| |||||||||||||  ||||||| |||||||| ||||||||||||||    
T  18355108 ttatattt-tataagatgatgaatacgttgttgttatattaatataagaagatgaatatgttgttgttatatt 18355037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 20912104 - 20912176
Alignment:
Q  42 gatgatgaatacattgttgttatattt-tataagatgatgaatacgttgttgttatatt-ttataagatgatg 112  Q
    ||||||||||| ||||||||||||||  ||||||| |||||||| |||||||||||||| |||||||||||||    
T  20912104 gatgatgaatatattgttgttatattaatataagaagatgaatatgttgttgttatattattataagatgatg 20912176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 372
Target Start/End: Original strand, 22120551 - 22120626
Alignment:
Q  294 tgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||||| |||   || ||||||||||||||||||| |||||| ||||||||||||| ||| ||||||    
T  22120551 tgatgattatattgtgttattt---aatttattagtgatgatgattatatgatgttatctatgagttgttaaatgtact 22120626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 5889803 - 5889866
Alignment:
Q  55 ttgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||| ||||||||||||||||| | |||||||||||| |||||||||||||||||    
T  5889803 ttgttgttatattattataagatgatgaatatgatgttgttatattattataagatgatgaata 5889866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 5889809 - 5889902
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaata---cgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  ||||||||||||||||   |||||||||||| |||||||||||||||||    |||||||||||||| |||||||||||||||||    
T  5889809 ttatattattataagatgatgaatatgatgttgttatattattataagatgatgaatatgttgttgttgttatattattataagatgatgaata 5889902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 117
Target Start/End: Complemental strand, 18355147 - 18355084
Alignment:
Q  55 ttgttgttatatt-ttataagatgatgaatacgttgttgttatattttataagatgatgaatac 117  Q
    ||||||||| ||| |||||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  18355147 ttgttgttaaattattataaaatgataaatatgttgttgttatattttataagatgatgaatac 18355084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 22120284 - 22120359
Alignment:
Q  43 atgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatattt-tataagatgatgaata 116  Q
    ||||||||||  ||||||||||||| |||||| ||||||| || ||||||||||||||| ||||||||||||||||    
T  22120284 atgatgaatatgttgttgttatattattataaaatgatgagtatgttgttgttatatttctataagatgatgaata 22120359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 24768245 - 24768308
Alignment:
Q  37 tataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||||||||||| |||||||||||||  ||||||| |||||||| ||||||||||||||    
T  24768245 tataagatgatgaatacgttgttgttatattaatataagaagatgaatatgttgttgttatatt 24768308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 10752010 - 10751939
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatattttataagatgatga 81  Q
    ||||||||||| |||||| ||||||| |||||| ||||| ||||  |||||||||||| ||||||||||||||    
T  10752010 tggtgttagtacgtgttg-ttatattaatataaaatgataaatatgttgttgttatatattataagatgatga 10751939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 22120335 - 22120399
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgtt 91  Q
    |||||||| ||||||||||||||||  ||||||||||||| |||||| |||||||||| ||||||    
T  22120335 ttatatttctataagatgatgaatatgttgttgttatattattataaaatgatgaatatgttgtt 22120399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 5889872 - 5889917
Alignment:
Q  55 ttgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||    
T  5889872 ttgttgttatattattataagatgatgaatatgttgttgttatatt 5889917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 40727094 - 40727143
Alignment:
Q  66 ttttataagatgatgaatacgttg---ttgttatattttataagatgatg 112  Q
    ||||||||||||||||||| ||||   |||||||||||||||||||||||    
T  40727094 ttttataagatgatgaatatgttgttgttgttatattttataagatgatg 40727143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 10751997 - 10751939
Alignment:
Q  56 tgttgttatattt-tataagatgatgaatacgttgttgttatattttataagatgatga 113  Q
    ||||||||||||  ||||| ||||| |||| ||||||||||||| ||||||||||||||    
T  10751997 tgttgttatattaatataaaatgataaatatgttgttgttatatattataagatgatga 10751939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 11219662 - 11219622
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  11219662 tgattacattgtgttgttttaaa-gttattagtgatgatgat 11219622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 11224248 - 11224208
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  11224248 tgattacattgtgttgttttaaa-gttattagtgatgatgat 11224208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 11226264 - 11226224
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  11226264 tgattacattgtgttgttttaaa-gttattagtgatgatgat 11226224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 11228070 - 11228030
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  11228070 tgattacattgtgttgttttaaa-gttattagtgatgatgat 11228030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 11230060 - 11230020
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  11230060 tgattacattgtgttgttttaaa-gttattagtgatgatgat 11230020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 20912123 - 20912176
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatg 80  Q
    ||||||| |||||||| ||||||||  ||||||||||||| |||||||||||||    
T  20912123 ttatattaatataagaagatgaatatgttgttgttatattattataagatgatg 20912176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 94
Target Start/End: Original strand, 21742239 - 21742279
Alignment:
Q  55 ttgttgttatatt-ttataagatgatgaatacgttgttgtt 94  Q
    ||||||||||||| ||||||||||||||||| |||||||||    
T  21742239 ttgttgttatattattataagatgatgaatatgttgttgtt 21742279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 94
Target Start/End: Original strand, 29915658 - 29915698
Alignment:
Q  55 ttgttgttatatt-ttataagatgatgaatacgttgttgtt 94  Q
    ||||||| ||||| |||||||||||||||||||||||||||    
T  29915658 ttgttgtgatattattataagatgatgaatacgttgttgtt 29915698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 4e-29; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 9555189 - 9555113
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9555189 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 9555113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 14758950 - 14759026
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14758950 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 14759026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 14955718 - 14955794
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14955718 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 14955794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 17807174 - 17807098
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17807174 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 17807098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 25688562 - 25688486
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25688562 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 25688486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 33740956 - 33740880
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33740956 gatgattatattgtgttgttttaaaa-ttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 33740880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 4562732 - 4562808
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4562732 gatgattatattgggttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 4562808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 5758414 - 5758490
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5758414 gatgattctattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 5758490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 20158408 - 20158482
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20158408 tgattacattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 20158482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 4562431 - 4562524
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  4562431 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 4562524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 9555490 - 9555397
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  9555490 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 9555397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 14758572 - 14758665
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  14758572 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 14758665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 14955337 - 14955430
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  14955337 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 14955430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 33741260 - 33741167
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  33741260 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 33741167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 20161084 - 20161158
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  20161084 tgattacattgtgttgttttaaa-gttattagtgatgacgattacatgatgatatctatgagttgttaagtgtact 20161158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 20163859 - 20163933
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  20163859 tgattacattgtgttgttttaaa-gttattagtgatgacgattacatgatgatatctatgagttgttaagtgtact 20163933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 15189824 - 15189734
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  ||||||||||||||||  ||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  15189824 ttatattattataagatgatgaatatgttgttgttatattattataagatgatgaatatgttgttgttatattattataagatgatgaata 15189734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 25688860 - 25688770
Alignment:
Q  10 ggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  25688860 ggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 25688770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 5757956 - 5758049
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||  |||||||||||||  || |||| |||||||| ||||||||||||||    
T  5757956 tttggtgttagtatgtgttgattatattttcataagatgatgaatatgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 5758049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 23996925 - 23997001
Alignment:
Q  293 gtgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  23996925 gtgatgattatattgtgttgttt---aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 23997001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 294 - 372
Target Start/End: Complemental strand, 12423062 - 12422987
Alignment:
Q  294 tgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  12423062 tgatgattatattgtgttgttt---aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 12422987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 294 - 372
Target Start/End: Original strand, 17052405 - 17052480
Alignment:
Q  294 tgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  17052405 tgatgattatattgtgttgttt---aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 17052480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 12486388 - 12486315
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| |||||||||||||||   ||||||||||||||||||||||| ||||||||||    
T  12486388 gatgattatattgtgttgttttaaa-gttattagtgatgat---tacatgatgatatctatgagttgttaagtgtact 12486315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 631706 - 631782
Alignment:
Q  293 gtgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||| ||||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  631706 gtgacgattatattgtgttgttt---aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 631782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 22634885 - 22634961
Alignment:
Q  293 gtgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||| ||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  22634885 gtgatgatcatattgtgttgttt---aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 22634961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 10711943 - 10711869
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||| ||| ||||||    
T  10711943 tgattacattgtgttgttttaaa-gttattagtgatgatgattacatgatgttatctaggagttgttaaatgtact 10711869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 10925713 - 10925639
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||| ||| ||||||    
T  10925713 tgattacattgtgttgttttaaa-gttattagtgatgatgattacatgatgttatctaggagttgttaaatgtact 10925639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 27533010 - 27532939
Alignment:
Q  46 atgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatattttataagatgatgaata 116  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||  ||||||| ||||||||    
T  27533010 atgaatacgttgttgttatattttcataagatgatgaatacgttgttgttatataatataagaagatgaata 27532939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 27532872 - 27532796
Alignment:
Q  293 gtgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||||| ||||   ||||||||||||||||||||||||||||| |||||| |||||| ||| ||||||    
T  27532872 gtgatgattatattgtgtagttt---aagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtact 27532796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 12486613 - 12486519
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaata---cattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||  |||||||||||||||     ||||||||||||| ||||| || |||||||| ||||||||||||||    
T  12486613 tggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatgaatatgttgttgttatatt 12486519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 15189791 - 15189724
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgtt 94  Q
    |||||||  ||||||||||||||||  ||||||||||||| ||||||||||||||||| |||||||||    
T  15189791 ttatattattataagatgatgaatatgttgttgttatattattataagatgatgaataagttgttgtt 15189724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 17048922 - 17049027
Alignment:
Q  12 tgttagtatgtgttgattatatttatataagatgatgaatacattgttgtt---atatt-ttataagatgatgaatacgttgttgttatatt-ttataag 106  Q
    ||||| ||||||||| |||||||| |||||||| |||||||  ||||||||   ||||| |||||| |||||||| | |||||||||||||| |||||||    
T  17048922 tgttattatgtgttgtttatatttttataagataatgaatatgttgttgttgttatattattataaaatgatgaacatgttgttgttatattattataag 17049021  T
Q  107 atgatg 112  Q
    ||||||    
T  17049022 atgatg 17049027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 27532995 - 27532929
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatattttataagatgatgaatacgttgttgtt 94  Q
    ||||||||  |||||||||||||||| ||||||||||||  ||||||| |||||||| |||||||||    
T  27532995 ttatattttcataagatgatgaatacgttgttgttatataatataagaagatgaatatgttgttgtt 27532929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 15481998 - 15482074
Alignment:
Q  41 agatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||  ||||||||||||| ||||||||||||||||| | ||||||| |||| |||||||||||||||||    
T  15481998 agatgatgaatatgttgttgttatattattataagatgatgaatatg-tgttgttgtattattataagatgatgaata 15482074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 15223973 - 15223901
Alignment:
Q  46 atgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  |||||||||| |||| |||||||||||||||||||||||||||||| ||||||  |||||||||    
T  15223973 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttgttatattattataaagtgatgaata 15223901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 325 - 372
Target Start/End: Original strand, 13813820 - 13813867
Alignment:
Q  325 ttagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  13813820 ttagtgatgatgattacatgatgttatctatgagttgttaaatgtact 13813867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 325 - 372
Target Start/End: Original strand, 13818308 - 13818355
Alignment:
Q  325 ttagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  13818308 ttagtgatgatgattacatgatgttatctatgagttgttaaatgtact 13818355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 15481980 - 15482042
Alignment:
Q  56 tgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||||||| | || |||||||||||| |||||||||||||| |||||||||||||||||    
T  15481980 tgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatgaata 15482042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 19857066 - 19857004
Alignment:
Q  56 tgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||||||| | || |||||||||||| |||||||||||||| |||||||||||||||||    
T  19857066 tgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatgaata 19857004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 361590 - 361514
Alignment:
Q  41 agatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||  ||| ||||||||| ||||||||||||||||| || |||||| |||| |||||||||||||||||    
T  361590 agatgatgaatatgttgctgttatattattataagatgatgaatatgt-gttgttgtattattataagatgatgaata 361514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 15223739 - 15223659
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatattttataagatgatgaatacgttgt 90  Q
    ||||||||||| |||||| ||||||| |||||| ||||| ||||  |||||||||||| ||||||| |||||| || |||||    
T  15223739 tggtgttagtacgtgttg-ttatattaatataaaatgataaatatgttgttgttatatattataaggtgatgattatgttgt 15223659  T

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Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 19857048 - 19856972
Alignment:
Q  41 agatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||  ||||||||||||| ||||||||||||||||| | ||||||  |||| |||||||||||||||||    
T  19857048 agatgatgaatatgttgttgttatattattataagatgatgaatatg-tgttgtagtattattataagatgatgaata 19856972  T

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Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 24048375 - 24048419
Alignment:
Q  328 gtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||||    
T  24048375 gtgatgatgattacatgatgttatctatgagttgttaaatgtact 24048419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 117
Target Start/End: Complemental strand, 27533010 - 27532970
Alignment:
Q  78 atgaatacgttgttgttatatttt-ataagatgatgaatac 117  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  27533010 atgaatacgttgttgttatattttcataagatgatgaatac 27532970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 631566 - 631649
Alignment:
Q  12 tgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgtt 94  Q
    ||||| |||||| || |||||||  ||||| ||||||||||  ||||||||||||| |||||| | |||||||| |||||||||    
T  631566 tgttattatgtgctgtttatattattataaaatgatgaatatgttgttgttatattattataaaaagatgaatatgttgttgtt 631649  T

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Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 12423278 - 12423189
Alignment:
Q  28 ttatatttatataagatgatgaata---cattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatg 112  Q
    |||||| | ||||||||||||||||     ||||||||||||| |||||| |||||||||| |||||||||||||| |||||||| ||||    
T  12423278 ttatatatttataagatgatgaatatgttgttgttgttatattattataaaatgatgaatatgttgttgttatattattataagacgatg 12423189  T

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Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 15481876 - 15481977
Alignment:
Q  20 tgtgttgattatatttatataagatgatgaatacat---tgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaa 114  Q
    ||||||| |||||||  ||| ||||||||| || ||   |||||||||||| | || |||||||||||| |||||||||||||| |||||||||||| ||    
T  15481876 tgtgttgcttatattattatgagatgatgattaaatatgtgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgataaa 15481975  T
Q  115 ta 116  Q
    ||    
T  15481976 ta 15481977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 22634791 - 22634850
Alignment:
Q  55 ttgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatg 112  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||||| |||| ||||||||    
T  22634791 ttgttgttatattattatatgatgatgaatatgttgttgttatattattatgagatgatg 22634850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 361608 - 361546
Alignment:
Q  56 tgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||||||| | || |||||||||||| |||| ||||||||| |||||||||||||||||    
T  361608 tgttgttatattatgatgagatgatgaatatgttgctgttatattattataagatgatgaata 361546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 23996736 - 23996813
Alignment:
Q  12 tgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgtt 91  Q
    ||||| ||||| ||| |||||||  ||||||||||||||||   |||||||||||| |||||| |||||||||| ||||||    
T  23996736 tgttattatgtattgtttatattattataagatgatgaata---tgttgttatattattataaaatgatgaatatgttgtt 23996813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 15223948 - 15223895
Alignment:
Q  38 ataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgt 90  Q
    |||||||||||||||| ||||||||||||| ||||||  ||||||||| |||||    
T  15223948 ataagatgatgaatacgttgttgttatattattataaagtgatgaatatgttgt 15223895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 4e-29; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 24630006 - 24630082
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24630006 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 24630082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 24645271 - 24645195
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24645271 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 24645195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 24648047 - 24647971
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24648047 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 24647971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 27600491 - 27600415
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27600491 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 27600415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 30346616 - 30346692
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30346616 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 30346692  T

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Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 10103255 - 10103331
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  10103255 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgttgatatctatgagttgttaagtgtact 10103331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 12902565 - 12902641
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  12902565 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacataatgatatctatgagttgttaagtgtact 12902641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 27380952 - 27381028
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27380952 gatgattatatggtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 27381028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 27384922 - 27384998
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27384922 gatgattatatggtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 27384998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 7 - 101
Target Start/End: Original strand, 24629625 - 24629720
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatttt 101  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||||    
T  24629625 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatttt 24629720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 10102954 - 10103047
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  10102954 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 10103047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 27600792 - 27600699
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  27600792 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 27600699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 30346161 - 30346254
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  30346161 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 30346254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 27384544 - 27384637
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||| ||||||||  || |||| |||||||| ||||||||||||||    
T  27384544 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgtcgttatattaatacaagaagatgaatatgttgttgttatatt 27384637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 31344035 - 31343961
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| || |||||||    
T  31344035 tgattacattgtgttgttttaaa-gttattagtgatgatgattacatgaagatatctatgagttgttaggtgtact 31343961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 27380498 - 27380591
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||| ||||||||  || |||| ||| |||| ||||||||||||||    
T  27380498 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgtcgttatattaatacaagaagataaatatgttgttgttatatt 27380591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 9784113 - 9784049
Alignment:
Q  294 tgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttg 361  Q
    |||| |||||||||||||||||   ||||||||||||||||||||||||||||| |||||||||||||    
T  9784113 tgataattatattgtgttgttt---aagttattagtgatgatgattacatgatgttatctatgagttg 9784049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 41532151 - 41532245
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaata---cattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||  |||||||||||||||     ||||||||||||| ||||| || |||||||| ||||||||||||||    
T  41532151 tggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatgaatatgttgttgttatatt 41532245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 1282394 - 1282300
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaata---cattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||| ||||  |||||||||||||||     ||||||||||||| ||||| || |||||||| ||||||||||||||    
T  1282394 tggtgttagtatgtgttgattacattttgataagatgatgaatatgttgttgttgttatattattatatgaagatgaatatgttgttgttatatt 1282300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 31344280 - 31344236
Alignment:
Q  55 ttgttgttatattttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  31344280 ttgttgttatattttataagatgatgaatacgttattgttatatt 31344236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 24648315 - 24648255
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt 67  Q
    |||||||||||||||||||||||||||||  |||| | ||||||||  |||||||||||||    
T  24648315 tttggtgttagtatgtgttgattatattttcataaaaagatgaatatgttgttgttatatt 24648255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 31344274 - 31344203
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||| ||||||||||||||||| || ||||||||||  || |||| |||||||| ||||||||||||||    
T  31344274 ttatattt-tataagatgatgaatacgttattgttatattaatacaagaagatgaatatgttgttgttatatt 31344203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 86 - 117
Target Start/End: Complemental strand, 31344281 - 31344250
Alignment:
Q  86 gttgttgttatattttataagatgatgaatac 117  Q
    ||||||||||||||||||||||||||||||||    
T  31344281 gttgttgttatattttataagatgatgaatac 31344250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Original strand, 41532414 - 41532454
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  41532414 tgattacattgtgttgttttaaa-gttattagtgatgatgat 41532454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 4e-29; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 1009382 - 1009306
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1009382 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 1009306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 1926754 - 1926830
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1926754 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 1926830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 16376774 - 16376850
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16376774 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 16376850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 20925768 - 20925844
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20925768 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 20925844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 52634388 - 52634312
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  52634388 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 52634312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 33796151 - 33796077
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33796151 tgattacattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 33796077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 1009683 - 1009590
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  1009683 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 1009590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 1926299 - 1926392
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  1926299 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 1926392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 16376550 - 16376643
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  16376550 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 16376643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 20925313 - 20925406
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  20925313 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 20925406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 52634769 - 52634676
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  52634769 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 52634676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 33796501 - 33796415
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgtt 94  Q
    ||||||||||||||||||||||||||| |||||||||||| |||  ||||||||||||| |||||| |||||||||| |||||||||    
T  33796501 tggtgttagtatgtgttgattatatttttataagatgatgtatatgttgttgttatattattataaaatgatgaatatgttgttgtt 33796415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 294 - 372
Target Start/End: Original strand, 22132058 - 22132133
Alignment:
Q  294 tgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  22132058 tgatgattatattgtgttgttt---aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 22132133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 41801085 - 41801171
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttata-ttttataagatgatgaatacgttgttgttatatt-ttataagatgatga 113  Q
    |||||||| ||||||||||||||||  ||||||||||| ||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  41801085 ttatatttttataagatgatgaatatgttgttgttatatttttataagatgatgaata-gttgttgatatattattataagatgatga 41801171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 20229941 - 20230031
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||  |||||||||||||||| |||||||||||||  ||||||| |||||||| |||||||||||||| |||||| ||||||||||    
T  20229941 ttatattttcataagatgatgaatacgttgttgttatattaatataagaagatgaatatgttgttgttatattattataaaatgatgaata 20230031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 319 - 372
Target Start/End: Original strand, 20230120 - 20230173
Alignment:
Q  319 aagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  20230120 aagttattagtgatgatgattacatgatgttatctatgagttgttaagtgtact 20230173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 21406373 - 21406297
Alignment:
Q  293 gtgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||||| ||||   ||||||||||||||||||||||||||||| |||||| |||||| ||| ||||||    
T  21406373 gtgatgattatattgtgtagttt---aagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtact 21406297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 33796377 - 33796288
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatattttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  ||||| ||||| ||||  | |||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  33796377 ttatattattataaaatgataaatatgtcgttgttatattttataagatgatgaatacgttgttgttatattaatataagaagatgaata 33796288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 28195092 - 28195156
Alignment:
Q  54 attgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  28195092 attgttgttatattattataagatgatgaatatgttgttgttatattattataagatgatgaata 28195156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 372
Target Start/End: Original strand, 41801238 - 41801313
Alignment:
Q  294 tgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||   || |||||||||||||||||||||||||  ||||||||||||| ||| ||||||    
T  41801238 tgatgattatattgtgttgttt---aatttattagtgatgatgattacatgatattatctatgagttgttaaatgtact 41801313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 35982326 - 35982389
Alignment:
Q  55 ttgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  35982326 ttgttgttatattattataagatgatgaatatgttgttgttatattattataagatgatgaata 35982389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 41801079 - 41801142
Alignment:
Q  55 ttgttgttatatttt-ataagatgatgaatacgttgttgttata-ttttataagatgatgaata 116  Q
    ||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||    
T  41801079 ttgttgttatatttttataagatgatgaatatgttgttgttatatttttataagatgatgaata 41801142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 21406608 - 21406535
Alignment:
Q  27 attatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||  |||||||||||||||| |||||||||||||  ||||||| |||||||| ||||||||||||||    
T  21406608 attatattttcataagatgatgaatacgttgttgttatattaatataagaagatgaatatgttgttgttatatt 21406535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 33796344 - 33796273
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatattt-tataagatgatgaatacgttgttgttatatt 99  Q
    |||||||| ||||||||||||||||| |||||||||||||  ||||||| |||||||| ||||||||||||||    
T  33796344 ttatattt-tataagatgatgaatacgttgttgttatattaatataagaagatgaatatgttgttgttatatt 33796273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 28195099 - 28195166
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgtt 94  Q
    |||||||  ||||||||||||||||  ||||||||||||| ||||||||||||||||| |||||||||    
T  28195099 ttatattattataagatgatgaatatgttgttgttatattattataagatgatgaataagttgttgtt 28195166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 117
Target Start/End: Complemental strand, 33796383 - 33796320
Alignment:
Q  55 ttgttgttatatt-ttataagatgatgaatacgttgttgttatattttataagatgatgaatac 117  Q
    ||||||||||||| |||||| ||||| |||| || |||||||||||||||||||||||||||||    
T  33796383 ttgttgttatattattataaaatgataaatatgtcgttgttatattttataagatgatgaatac 33796320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 35982332 - 35982399
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgtt 94  Q
    |||||||  ||||||||||||||||  ||||||||||||| ||||||||||||||||| |||||||||    
T  35982332 ttatattattataagatgatgaatatgttgttgttatattattataagatgatgaatatgttgttgtt 35982399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 21740466 - 21740528
Alignment:
Q  56 tgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||||||| | || ||||||||||||||||||||||||||| |||||||||||||||||    
T  21740466 tgttgttatattatgatgagatgatgaatacgttgttgttatattattataagatgatgaata 21740528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 20229938 - 20229998
Alignment:
Q  58 ttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||||||| ||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  20229938 ttgttatattttcataagatgatgaatacgttgttgttatattaatataagaagatgaata 20229998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 20315678 - 20315606
Alignment:
Q  46 atgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  ||||||||||||| | || |||||||||||| |||||||||||||| |||||||||||||||||    
T  20315678 atgaatatgttgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatgaata 20315606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 20315880 - 20315794
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||  || ||||||||||||   |||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||    
T  20315880 ttatattttgatgagatgatgaata---tgttgttatattattataagatgatgaatatgt-gttgttatattattataagatgatgaata 20315794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 46 - 116
Target Start/End: Original strand, 39244866 - 39244938
Alignment:
Q  46 atgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  |||||||||| |||| |||||||||||||||||||||||||||||| ||||||  |||||||||    
T  39244866 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttgttatattattataaagtgatgaata 39244938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 46 - 116
Target Start/End: Original strand, 39248421 - 39248493
Alignment:
Q  46 atgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  |||||||||| |||| |||||||||||||||||||||||||||||| ||||||  |||||||||    
T  39248421 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttgttatattattataaagtgatgaata 39248493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 46 - 116
Target Start/End: Original strand, 41389314 - 41389386
Alignment:
Q  46 atgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  |||||||||| |||| |||||||||||||||||||||||||||||| ||||||  |||||||||    
T  41389314 atgaatatgttgttgttatgttttcataagatgatgaatacgttgttgttatattattataaagtgatgaata 41389386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 113
Target Start/End: Complemental strand, 12271107 - 12271028
Alignment:
Q  37 tataagatgatgaatacattgttg-ttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatga 113  Q
    ||||||||||| ||||  |||||| ||||||| ||||||||||||||||| |||||||||||||| |||| |||||||||    
T  12271107 tataagatgattaatatgttgttgcttatattattataagatgatgaatatgttgttgttatattattatgagatgatga 12271028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 41306224 - 41306286
Alignment:
Q  56 tgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||||||| | || |||||||||||| |||||||||||||| |||||||||||||||||    
T  41306224 tgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatgaata 41306286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 21406607 - 21406550
Alignment:
Q  61 ttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||| ||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  21406607 ttatattttcataagatgatgaatacgttgttgttatattaatataagaagatgaata 21406550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 41389547 - 41389627
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatattttataagatgatgaatacgttgt 90  Q
    ||||||||||| |||||| ||||||| |||||| ||||| ||||  |||||||||||| ||||||| |||||| || |||||    
T  41389547 tggtgttagtacgtgttg-ttatattaatataaaatgataaatatgttgttgttatatattataaggtgatgattatgttgt 41389627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 21740484 - 21740528
Alignment:
Q  41 agatgatgaatacattgttgttatatt-ttataagatgatgaata 84  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||    
T  21740484 agatgatgaatacgttgttgttatattattataagatgatgaata 21740528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 39245099 - 39245170
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatattttataagatgatga 81  Q
    ||||||||||| |||||| ||||||| |||||| |||||  |||  |||||||||||| ||||||||||||||    
T  39245099 tggtgttagtacgtgttg-ttatattaatataaaatgatagatatgttgttgttatatattataagatgatga 39245170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 39248654 - 39248725
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatattttataagatgatga 81  Q
    ||||||||||| |||||| ||||||| |||||| |||||  |||  |||||||||||| ||||||||||||||    
T  39248654 tggtgttagtacgtgttg-ttatattaatataaaatgatagatatgttgttgttatatattataagatgatga 39248725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 22131828 - 22131891
Alignment:
Q  55 ttgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||| |||||| |||||||| | |||||||||||||| |||||| ||||||||||    
T  22131828 ttgttgttatattattataaaatgatgaacatgttgttgttatattattataaaatgatgaata 22131891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 22131897 - 22131956
Alignment:
Q  55 ttgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatg 112  Q
    ||||||||||||| |||||| ||| |||||| |||||||||||||| |||||||||||||    
T  22131897 ttgttgttatattattataaaatggtgaatatgttgttgttatattattataagatgatg 22131956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 33796476 - 33796425
Alignment:
Q  66 ttttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||||| ||| |||||||||||||| |||||| ||||||||||    
T  33796476 ttttataagatgatgtatatgttgttgttatattattataaaatgatgaata 33796425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 41306242 - 41306300
Alignment:
Q  41 agatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||||||  ||||||||||||| ||||||||||||||||| | ||||||||||||    
T  41306242 agatgatgaatatgttgttgttatattattataagatgatgaatatg-tgttgttatatt 41306300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 20315895 - 20315826
Alignment:
Q  46 atgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  ||||||||||||||| || ||||||||||||   |||||||||||| |||||||||||||||||    
T  20315895 atgaatatgttgttgttatattttgatgagatgatgaata---tgttgttatattattataagatgatgaata 20315826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 21740341 - 21740430
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  ||| ||||||||||||  ||||||||||||| |||||||||||| |||| | |||||||||||| | || ||||||||||||    
T  21740341 ttatattattatgagatgatgaatatgttgttgttatattattataagatgataaatatg-tgttgttatattatgatgagatgatgaata 21740430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 21740401 - 21740463
Alignment:
Q  56 tgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||||||| | || |||||||||||| |||||||||||||| |||||||||||| ||||    
T  21740401 tgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgataaata 21740463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 21740419 - 21740496
Alignment:
Q  41 agatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaatac 117  Q
    ||||||||||||  ||||||||||||| |||||||||||| |||| | |||||||||||| | || |||||||||||||    
T  21740419 agatgatgaatatgttgttgttatattattataagatgataaatatg-tgttgttatattatgatgagatgatgaatac 21740496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 39244891 - 39244945
Alignment:
Q  38 ataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgtt 91  Q
    |||||||||||||||| ||||||||||||| ||||||  ||||||||| ||||||    
T  39244891 ataagatgatgaatacgttgttgttatattattataaagtgatgaatatgttgtt 39244945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 39248446 - 39248500
Alignment:
Q  38 ataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgtt 91  Q
    |||||||||||||||| ||||||||||||| ||||||  ||||||||| ||||||    
T  39248446 ataagatgatgaatacgttgttgttatattattataaagtgatgaatatgttgtt 39248500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 41306262 - 41306351
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttata-ttttataagatgatgaata 116  Q
    |||||||  ||||||||||||||||   |||||||||||| | || ||||||| |||| |||||||||||| | |||||||||||||||||    
T  41306262 ttatattattataagatgatgaata-tgtgttgttatattatgatgagatgattaatatgttgttgttatactattataagatgatgaata 41306351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 41389339 - 41389393
Alignment:
Q  38 ataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgtt 91  Q
    |||||||||||||||| ||||||||||||| ||||||  ||||||||| ||||||    
T  41389339 ataagatgatgaatacgttgttgttatattattataaagtgatgaatatgttgtt 41389393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 41306307 - 41306383
Alignment:
Q  41 agatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||| ||||  ||||||||||| | ||||||||||||||||| || |||||| |||| |||||||||||||||||    
T  41306307 agatgattaatatgttgttgttatactattataagatgatgaatatgt-gttgttgtattattataagatgatgaata 41306383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 12271088 - 12271028
Alignment:
Q  22 tgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatga 81  Q
    ||||| |||||||  ||||||||||||||||  ||||||||||||| |||| |||||||||    
T  12271088 tgttgcttatattattataagatgatgaatatgttgttgttatattattatgagatgatga 12271028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 116
Target Start/End: Complemental strand, 20315585 - 20315541
Alignment:
Q  73 agatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||||||| |||||||||||||| || ||||||||||||||    
T  20315585 agatgatgaatatgttgttgttatattattttaagatgatgaata 20315541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 20315650 - 20315606
Alignment:
Q  41 agatgatgaatacattgttgttatatt-ttataagatgatgaata 84  Q
    ||||||||||||  ||||||||||||| |||||||||||||||||    
T  20315650 agatgatgaatatgttgttgttatattattataagatgatgaata 20315606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 6279 - 6355
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  6279 gatgattatattgtgttgttttaaa-gttattagcgatgatgattacatgatgatatctatgagttgttaagtgtact 6355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 6165 - 6225
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt 67  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||    
T  6165 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatatt 6225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 99
Target Start/End: Original strand, 6186 - 6225
Alignment:
Q  61 ttatatttt-ataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  6186 ttatattttcataagatgatgaatacgttgttgttatatt 6225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 59; Significance: 6e-25; HSPs: 4)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 11148 - 11058
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  11148 ttatattttcataagatgatgaatacattgttgttatatttttataagatgatgaatacgttgttgttatattaatataagaagatgaata 11058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 11167 - 11090
Alignment:
Q  42 gatgatgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatatttt-ataagatgatgaatac 117  Q
    |||||||||||  ||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  11167 gatgatgaatatgttgttgttatattttcataagatgatgaatacattgttgttatatttttataagatgatgaatac 11090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 11115 - 11043
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatattt-tataagatgatgaatacgttgttgttatatt 99  Q
    |||||||| ||||||||||||||||| |||||||||||||  ||||||| |||||||| ||||||||||||||    
T  11115 ttatatttttataagatgatgaatacgttgttgttatattaatataagaagatgaatatgttgttgttatatt 11043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 10874 - 10834
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  10874 tgattacattgtgttgttttaaa-gttattagtgatgatgat 10834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 11170 - 11095
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11170 gatgattat-ttgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 11095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 11477 - 11384
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  || |||| |||||||| ||||||||||||||    
T  11477 tttggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatgaatatgttgttgttatatt 11384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 56; Significance: 4e-23; HSPs: 3)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 781 - 855
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  781 tgattacattgtgttgttttaaa-gttattagtgatgatgattgcatgatgatatctatgagttgttaagtgtact 855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 112
Target Start/End: Original strand, 401 - 457
Alignment:
Q  58 ttgttatatttt-ataagatgatgaatacgttgttgttata-ttttataagatgatg 112  Q
    |||||||||||| ||||||||||||||| ||||| |||||| |||||||||||||||    
T  401 ttgttatatttttataagatgatgaatatgttgtggttatatttttataagatgatg 457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 404 - 457
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttata-ttttataagatgatg 80  Q
    |||||||| ||||||||||||||||  |||| |||||| |||||||||||||||    
T  404 ttatatttttataagatgatgaatatgttgtggttatatttttataagatgatg 457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 14962 - 14888
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  14962 tgattacattgtgttgttttaaa-gttattagtgatgatgattacatgaagatatctatgagttgttaagtgtact 14888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 56; Significance: 4e-23; HSPs: 3)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 372
Target Start/End: Original strand, 21298 - 21374
Alignment:
Q  294 tgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  21298 tgatgattatattgtgttgttt--aaagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 21374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 21150 - 21213
Alignment:
Q  55 ttgttgttatatttt-ataagatgatgaatacgttgttgttata-ttttataagatgatgaata 116  Q
    ||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||    
T  21150 ttgttgttatatttttataagatgatgaatatgttgttgttatatttttataagatgatgaata 21213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 21156 - 21226
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttata-ttttataagatgatgaatacgttgttgttata 97  Q
    |||||||| ||||||||||||||||  ||||||||||| ||||||||||||||||||| |||||| |||||    
T  21156 ttatatttttataagatgatgaatatgttgttgttatatttttataagatgatgaatatgttgttattata 21226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 56; Significance: 4e-23; HSPs: 3)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 304 - 371
Target Start/End: Original strand, 11027 - 11093
Alignment:
Q  304 attgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtac 371  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11027 attgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtac 11093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 10728 - 10790
Alignment:
Q  55 ttgttgttatattttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||| |||||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  10728 ttgttgttatactttataagatgatgaatacgttgttgttatattaatataagaagatgaata 10790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 10742 - 10805
Alignment:
Q  37 tataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||||||||||| |||||||||||||  ||||||| |||||||| ||||||||||||||    
T  10742 tataagatgatgaatacgttgttgttatattaatataagaagatgaatatgttgttgttatatt 10805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 11895 - 11821
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  11895 tgattacattgtgttgttttaaaa-ttattagtgatgatgattacatgatgaaatctatgagttgttaagtgtact 11821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 294 - 372
Target Start/End: Original strand, 6920 - 6995
Alignment:
Q  294 tgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  6920 tgatgattatattgtgttgttt---aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 6995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 6830 - 6889
Alignment:
Q  55 ttgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatga 113  Q
    ||||||||||||||| ||||||||||||||| ||||||| |||||| ||||||||||||||    
T  6830 ttgttgttatatttttataagatgatgaata-gttgttgatatattattataagatgatga 6889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 52; Significance: 1e-20; HSPs: 3)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 313 - 372
Target Start/End: Complemental strand, 8680 - 8621
Alignment:
Q  313 ttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8680 tttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 8621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 8939 - 8867
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||| ||||| ||||||||||| || ||||||||||  ||||| | |||||||| ||||||||||||||    
T  8939 ttatatttttataaaatgatgaatacgtttttgttatattaatataaaaagatgaatatgttgttgttatatt 8867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 8945 - 8900
Alignment:
Q  55 ttgttgttatatttt-ataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||||||||| |||| |||||||||||||| ||||||||||    
T  8945 ttgttgttatatttttataaaatgatgaatacgtttttgttatatt 8900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 34089 - 34162
Alignment:
Q  295 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||||||| ||||||||||    
T  34089 gatgattatattgtgttgttttaaa-gttattagtgat---gattacatgatgatatctatgagttgttaagtgtact 34162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 33864 - 33958
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaata---cattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||  |||||||||||||||     ||||||||||||| ||||| || |||||||| ||||||||||||||    
T  33864 tggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatgaatatgttgttgttatatt 33958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 51; Significance: 4e-20; HSPs: 4)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 8580 - 8670
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  ||||| |||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||| ||| |||||||||||||    
T  8580 ttatattattataaaatgatgaatatattgttgttatattattataagatgatgaatatgttgttgttatattattagaagatgatgaata 8670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 8547 - 8637
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  ||||||||||||||||  ||||||||||||| |||||| ||||||||||  ||||||||||||| |||||||||||||||||    
T  8547 ttatattattataagatgatgaatatgttgttgttatattattataaaatgatgaatatattgttgttatattattataagatgatgaata 8637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 8613 - 8685
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||  ||||||||||||||||  ||||||||||||| ||| ||||||||||||| ||||||||||||||    
T  8613 ttatattattataagatgatgaatatgttgttgttatattattagaagatgatgaatatgttgttgttatatt 8685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 8541 - 8604
Alignment:
Q  55 ttgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||| |||||| ||||||||||    
T  8541 ttgttgttatattattataagatgatgaatatgttgttgttatattattataaaatgatgaata 8604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 25526 - 25602
Alignment:
Q  293 gtgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||||||||||   ||||||||||||||||||| ||||||||| ||||||||||||| ||| ||||||    
T  25526 gtgatgattatattgtgttgttt---aagttattagtgatgatgaatacatgatgttatctatgagttgttaaatgtact 25602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 25419 - 25491
Alignment:
Q  42 gatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatg 112  Q
    |||||||||||  ||||||||||||| ||||| ||||||||||| ||||||||||||||  ||||||||||||    
T  25419 gatgatgaatatgttgttgttatattattatatgatgatgaatatgttgttgttatattactataagatgatg 25491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 5004 - 5097
Alignment:
Q  7 tttggtgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||  |||||||||||||  || || | |||||||| ||||||||||||||    
T  5004 tttggtgttagtatgtgttgattatgttttcataagatgatgaatatgttgttgttatattaatacaaaaagatgaatatgttgttgttatatt 5097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 360
Target Start/End: Original strand, 5512 - 5553
Alignment:
Q  319 aagttattagtgatgatgattacatgatgatatctatgagtt 360  Q
    |||||||||||||||||||||| |||| ||||| ||||||||    
T  5512 aagttattagtgatgatgattatatgaagatatttatgagtt 5553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 45; Significance: 1e-16; HSPs: 5)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 19182 - 19110
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||| ||||||||||||||||| |||||||||||||  ||||||| |||||||| ||||||||||||||    
T  19182 ttatatttttataagatgatgaatacgttgttgttatattaatataagaagatgaatatgttgttgttatatt 19110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 19286 - 19214
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||| ||||||||||||||||| ||||||||| |||  ||||||| |||||||| ||||||||||||||    
T  19286 ttatatttttataagatgatgaatacgttgttgttagattaatataagaagatgaatatgttgttgttatatt 19214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 19188 - 19125
Alignment:
Q  55 ttgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  19188 ttgttgttatatttttataagatgatgaatacgttgttgttatattaatataagaagatgaata 19125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 294 - 372
Target Start/End: Complemental strand, 18942 - 18867
Alignment:
Q  294 tgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||||||||| |   ||||||||||||||||||||  ||||| ||||||| ||||| ||| ||||||    
T  18942 tgatgattatattgtgttgtttca---gttattagtgatgatgattatgtgatgttatctataagttgttaaatgtact 18867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 19292 - 19229
Alignment:
Q  55 ttgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||  ||||||| ||||||||    
T  19292 ttgttgttatatttttataagatgatgaatacgttgttgttagattaatataagaagatgaata 19229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 15283 - 15377
Alignment:
Q  9 tggtgttagtatgtgttgattatatttatataagatgatgaata---cattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||||||||||||||||  |||||||||||||||     ||||||||||||| ||||| || |||||||| ||||||||||||||    
T  15283 tggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatgaatatgttgttgttatatt 15377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Original strand, 15546 - 15586
Alignment:
Q  297 tgattatattgtgttgttttaaaagttattagtgatgatgat 338  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  15546 tgattacattgtgttgttttaaa-gttattagtgatgatgat 15586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 44; Significance: 6e-16; HSPs: 3)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 371
Target Start/End: Original strand, 8699 - 8773
Alignment:
Q  294 tgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtac 371  Q
    ||||||||||||||||||||||   || |||||||||||||||||||||||||| |||||| |||||| ||| |||||    
T  8699 tgatgattatattgtgttgttt---aatttattagtgatgatgattacatgatgttatctacgagttgttaaatgtac 8773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 8445 - 8502
Alignment:
Q  12 tgttagtatgtgttgattatatttatataagatgatgaatacattgttgttatatttt 69  Q
    ||||| |||||| || |||||||| ||||||||||||||||  |||||||||||||||    
T  8445 tgttattatgtgatgtttatatttttataagatgatgaatatgttgttgttatatttt 8502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 101
Target Start/End: Original strand, 8467 - 8502
Alignment:
Q  66 ttttataagatgatgaatacgttgttgttatatttt 101  Q
    ||||||||||||||||||| ||||||||||||||||    
T  8467 ttttataagatgatgaatatgttgttgttatatttt 8502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 3)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 4094 - 4018
Alignment:
Q  293 gtgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||||| ||||   |||||||||||||| |||||||||||||| |||||| |||||| ||| ||||||    
T  4094 gtgatgattatattgtgtagttt---aagttattagtgattatgattacatgatgttatctaggagttgttaaatgtact 4018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 1009 - 937
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||  |||||||||||||||| |||||||||||||  ||||||| |||||||| ||||||||||||||    
T  1009 ttatattttcataagatgatgaatacgttgttgttatattaatataagaagatgaatatgttgttgttatatt 937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 1009 - 952
Alignment:
Q  61 ttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||| ||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  1009 ttatattttcataagatgatgaatacgttgttgttatattaatataagaagatgaata 952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 372
Target Start/End: Original strand, 74291 - 74366
Alignment:
Q  294 tgatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||| |||||||||   || |||||||||| ||||||||||||||| ||||||||||||| ||| ||||||    
T  74291 tgatgattatatggtgttgttt---aatttattagtgaagatgattacatgatgttatctatgagttgttaaatgtact 74366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 74071 - 74116
Alignment:
Q  55 ttgttgttatattt-tataagatgatgaatacgttgttgttatatt 99  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||    
T  74071 ttgttgttatatttctataagatgatgaatatgttgttgttatatt 74116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 4)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 44459 - 44548
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  ||||||||||||||||  | ||||||||||| | || |||||||||||| |||||||||||||| |||||||||||||||||    
T  44459 ttatattattataagatgatgaatatgt-gttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatgaata 44548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 44504 - 44580
Alignment:
Q  41 agatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||  ||||||||||||| ||||||||||||||||| || |||||| |||| |||||||||||||||||    
T  44504 agatgatgaatatgttgttgttatattattataagatgatgaatatgt-gttgttgtattattataagatgatgaata 44580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 44421 - 44483
Alignment:
Q  56 tgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||||||| | || |||||||||||| |||||||||||||| |||||||||||||||||    
T  44421 tgttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatgaata 44483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 44439 - 44515
Alignment:
Q  41 agatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||  ||||||||||||| ||||||||||||||||| | |||||||||||| | || ||||||||||||    
T  44439 agatgatgaatatgttgttgttatattattataagatgatgaatatg-tgttgttatattatgatgagatgatgaata 44515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 7004 - 6928
Alignment:
Q  41 agatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||  ||||||||||||| ||||||||||||||||| || |||||| |||| |||||||||||||||||    
T  7004 agatgatgaatatgttgttgttatattattataagatgatgaatatgt-gttgttgtattattataagatgatgaata 6928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 7040 - 6960
Alignment:
Q  37 tataagatgatgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||||||  | ||||||||||| | || |||||||||||| |||||||||||||| |||||||||||||||||    
T  7040 tataagatgatgaatatgt-gttgttatattatgatgagatgatgaatatgttgttgttatattattataagatgatgaata 6960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 7087 - 7025
Alignment:
Q  56 tgttgttatatttt-ataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||||||| | || |||||||||||| ||||||||| |||| |||||||||||||||||    
T  7087 tgttgttatattatgatgagatgatgaatatgttgttgttgtattattataagatgatgaata 7025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 372
Target Start/End: Original strand, 37179 - 37232
Alignment:
Q  319 aagttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| ||||||    
T  37179 aagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtact 37232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 9113 - 9037
Alignment:
Q  41 agatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||||  ||||||||||||| ||||||||||||||||| | ||||||| |||| |||||||||||||||||    
T  9113 agatgatgaatatgttgttgttatattattataagatgatgaatatg-tgttgttgtattattataagatgatgaata 9037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 9093 - 9005
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  ||||||||||||||||  | |||||| |||| ||||||||||||||||| || |||||| |||| |||||||||||||||||    
T  9093 ttatattattataagatgatgaatatgt-gttgttgtattattataagatgatgaatatgt-gttgttgtattattataagatgatgaata 9005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 37; Significance: 0.000000000009; HSPs: 3)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 6107 - 6035
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatttt-ataagatgatgaatacgttgttgttatatt 99  Q
    ||||||||  |||||| ||||||||  ||||||||||||||| |||||| |||||||| ||||||||||||||    
T  6107 ttatattttcataagaagatgaatatgttgttgttatattttcataagaagatgaatatgttgttgttatatt 6035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 322 - 372
Target Start/End: Complemental strand, 5917 - 5869
Alignment:
Q  322 ttattagtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||||||    
T  5917 ttattagtgatgatgattacatgatgata--tatgagttgttaagtgtact 5869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 6113 - 6050
Alignment:
Q  55 ttgttgttatatttt-ataagatgatgaatacgttgttgttatatttt-ataagatgatgaata 116  Q
    ||||||||||||||| |||||| |||||||| |||||||||||||||| |||||| ||||||||    
T  6113 ttgttgttatattttcataagaagatgaatatgttgttgttatattttcataagaagatgaata 6050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1873 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1873
Description:

Target: scaffold1873; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 753 - 683
Alignment:
Q  293 gtgatgattatattgtgttgttttaaaagttattagtga-tgatgattacatgatgatatctatgagttgataa 365  Q
    |||||||||||||||||||||||   ||||||||||||| || ||||||||||||| |||| |||| |||||||    
T  753 gtgatgattatattgtgttgttt---aagttattagtgattggtgattacatgatgttatccatgaattgataa 683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 37050 - 37112
Alignment:
Q  55 ttgttgttatatttt-ataagatgatgaatacgttgttgt-tatattttataagatgatgaata 116  Q
    ||||||||||||||| ||||||||||||||| |||||||| ||| |||||||||||||||||||    
T  37050 ttgttgttatatttttataagatgatgaatatgttgttgtatat-ttttataagatgatgaata 37112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 372
Target Start/End: Original strand, 37161 - 37237
Alignment:
Q  294 tgatgattatattgtgttgttttaaaagttatta-gtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    ||||||||||||||||| || |   ||||||||| | |||||||||||||||||| ||||||||||||| ||| ||||||    
T  37161 tgatgattatattgtgtggtct---aagttattatgagatgatgattacatgatgttatctatgagttgttaaatgtact 37237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 37056 - 37117
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgt-tatattttataagatgatgaatacgttg 89  Q
    |||||||| ||||||||||||||||  ||||||| ||| ||||||||||||||||||| ||||    
T  37056 ttatatttttataagatgatgaatatgttgttgtatat-ttttataagatgatgaatatgttg 37117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000003; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 362096 - 362022
Alignment:
Q  43 atgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    ||||||||||  ||||||||||||| ||||||||||||||||| || |||||| |||| |||||||||||||||||    
T  362096 atgatgaatatgttgttgttatattattataagatgatgaatatgt-gttgttgtattattataagatgatgaata 362022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 362274 - 362185
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||  ||| ||||||||||||  ||||||||||||| |||||||||||| |||| | |||||||||||| |||| ||||||||||||    
T  362274 ttatattattatgagatgatgaatatgttgttgttatattattataagatgataaatatg-tgttgttatattattatgagatgatgaata 362185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 362214 - 362152
Alignment:
Q  56 tgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||||||| |||| |||||||||||| |||||||||||||| | || ||||||||||||    
T  362214 tgttgttatattattatgagatgatgaatatgttgttgttatattatgatgagatgatgaata 362152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 362218 - 362119
Alignment:
Q  18 tatgtgttgattatatttatataagatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatgaat 115  Q
    ||||||||| |||||||  ||| ||||||||||||  ||||||||||||| | || ||||||||||||  |||||||||| || || ||||||||| |||    
T  362218 tatgtgttg-ttatattattatgagatgatgaatatgttgttgttatattatgatgagatgatgaatattttgttgttatgttattctaagatgataaat 362120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 129 - 76
Alignment:
Q  12 tgttagtatgtgttgattatatttatataagatgatgaatacattgttgttata 65  Q
    ||||| ||||||||| |||||||| ||||||||||||||||  |||||||||||    
T  129 tgttattatgtgttgtttatatttttataagatgatgaatatgttgttgttata 76  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 34; Significance: 0.0000000005; HSPs: 4)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 3024 - 2917
Alignment:
Q  12 tgttagtatgtgttgattatatttatataagatgatgaat---acattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataag 106  Q
    ||||| ||||||||| |||||||| |||||||||||||||   |  ||||||||||||| | |||| ||||| || | |||||||||||||| ||||||     
T  3024 tgttattatgtgttgtttatatttttataagatgatgaatatgatgttgttgttatattatgataaaatgataaacatgttgttgttatattattataaa 2925  T
Q  107 atgatgaa 114  Q
    ||||||||    
T  2924 atgatgaa 2917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 7087 - 6980
Alignment:
Q  12 tgttagtatgtgttgattatatttatataagatgatgaat---acattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataag 106  Q
    ||||| ||||||||| |||||||| |||||||||||||||   |  ||||||||||||| | |||| ||||| || | |||||||||||||| ||||||     
T  7087 tgttattatgtgttgtttatatttttataagatgatgaatatgatgttgttgttatattatgataaaatgataaacatgttgttgttatattattataaa 6988  T
Q  107 atgatgaa 114  Q
    ||||||||    
T  6987 atgatgaa 6980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 2945 - 2886
Alignment:
Q  55 ttgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatg 112  Q
    ||||||||||||| |||||| |||||||| | |||||||||||||| |||||||||||||    
T  2945 ttgttgttatattattataaaatgatgaacatgttgttgttatattattataagatgatg 2886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 7008 - 6949
Alignment:
Q  55 ttgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatg 112  Q
    ||||||||||||| |||||| |||||||| | |||||||||||||| |||||||||||||    
T  7008 ttgttgttatattattataaaatgatgaacatgttgttgttatattattataagatgatg 6949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 26790 - 26879
Alignment:
Q  28 ttatatttatataagatgatgaatacattgttg-ttatatt-ttataagatgatgaatacgttgttg-ttatatt-ttataagatgatga 113  Q
    |||||||  |||||||||||||||| ||||||| |||| || |||||||||||||| || ||||||| ||||||| ||||||||||||||    
T  26790 ttatattattataagatgatgaatatattgttgcttatgttattataagatgatgattatgttgttgtttatattattataagatgatga 26879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 26833 - 26913
Alignment:
Q  37 tataagatgatgaatacattgttgtt-atatt-ttataagatgatgaatacgttgttg-ttatatt-ttataagatgatga 113  Q
    ||||||||||||| ||  |||||||| ||||| |||||||||||||| || ||||||| ||||||| ||||||||||||||    
T  26833 tataagatgatgattatgttgttgtttatattattataagatgatgattatgttgttgtttatattattataagatgatga 26913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 372
Target Start/End: Complemental strand, 28560 - 28516
Alignment:
Q  328 gtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||||    
T  28560 gtgatgatgattacatgatgttatctatgagttgttaaatgtact 28516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 372
Target Start/End: Complemental strand, 34025 - 33981
Alignment:
Q  328 gtgatgatgattacatgatgatatctatgagttgataagtgtact 372  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||||    
T  34025 gtgatgatgattacatgatgttatctatgagttgttaaatgtact 33981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 79884 - 79957
Alignment:
Q  41 agatgatgaatacattgttgttatatt-ttataagatgatgaatacgttgttgttatatt-ttataagatgatga 113  Q
    ||||||||||||  || |||||||||| ||||||||||||||||| | |||||||||||| |||| |||||||||    
T  79884 agatgatgaatatgttattgttatattattataagatgatgaatatg-tgttgttatattattatgagatgatga 79957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 116
Target Start/End: Original strand, 79884 - 79928
Alignment:
Q  73 agatgatgaatacgttgttgttatatt-ttataagatgatgaata 116  Q
    |||||||||||| ||| |||||||||| |||||||||||||||||    
T  79884 agatgatgaatatgttattgttatattattataagatgatgaata 79928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 10166 - 10109
Alignment:
Q  37 tataagatgatgaatacattgttg-ttatatt-ttataagatgatgaatacgttgttg 92  Q
    |||||||||||||||| ||||||| |||| || ||||||||||||||||| |||||||    
T  10166 tataagatgatgaatatattgttgcttatgttattataagatgatgaatatgttgttg 10109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 8528 - 8588
Alignment:
Q  56 tgttgttatatt-ttataagatgatgaatacgttgttg-ttatatt-ttataagatgatga 113  Q
    |||||||||||| |||||||||||||| || ||||||| ||||||| ||||||||||||||    
T  8528 tgttgttatattattataagatgatgattatgttgttgtttatattattataagatgatga 8588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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