View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21672_high_11 (Length: 387)

Name: NF21672_high_11
Description: NF21672
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21672_high_11
NF21672_high_11
[»] chr1 (12 HSPs)
chr1 (1-363)||(4048452-4048814)
chr1 (56-146)||(43427401-43427491)
chr1 (6-53)||(28037679-28037726)
chr1 (1-77)||(39501135-39501211)
chr1 (6-69)||(7386682-7386745)
chr1 (1-70)||(14651010-14651076)
chr1 (1-70)||(14660801-14660867)
chr1 (4-71)||(49508557-49508624)
chr1 (8-71)||(45432812-45432875)
chr1 (4-70)||(33978180-33978246)
chr1 (24-77)||(38599037-38599090)
chr1 (13-69)||(27643376-27643432)
[»] chr2 (12 HSPs)
chr2 (4-77)||(37670707-37670780)
chr2 (12-69)||(4244397-4244454)
chr2 (1-65)||(8323531-8323595)
chr2 (1-77)||(10748060-10748136)
chr2 (55-123)||(17247364-17247432)
chr2 (4-70)||(36756954-36757020)
chr2 (4-71)||(43115039-43115106)
chr2 (7-71)||(648532-648596)
chr2 (9-71)||(30928232-30928294)
chr2 (6-71)||(4017117-4017182)
chr2 (6-71)||(24467313-24467378)
chr2 (1-53)||(33054866-33054918)
[»] chr8 (8 HSPs)
chr8 (1-77)||(9180725-9180801)
chr8 (1-77)||(11629510-11629586)
chr8 (1-77)||(34752684-34752760)
chr8 (4-70)||(10394649-10394715)
chr8 (4-71)||(5896310-5896377)
chr8 (6-71)||(35613624-35613689)
chr8 (13-69)||(16484161-16484217)
chr8 (11-123)||(32230002-32230114)
[»] chr6 (4 HSPs)
chr6 (1-77)||(10158949-10159025)
chr6 (1-42)||(14453395-14453436)
chr6 (1-70)||(21729826-21729895)
chr6 (9-78)||(25357649-25357718)
[»] chr4 (11 HSPs)
chr4 (1-77)||(42327897-42327973)
chr4 (115-316)||(26021769-26021970)
chr4 (15-128)||(39956211-39956324)
chr4 (4-77)||(32499556-32499629)
chr4 (19-71)||(42440985-42441038)
chr4 (1-69)||(43733928-43733996)
chr4 (6-53)||(5185480-5185527)
chr4 (9-83)||(16430971-16431045)
chr4 (4-70)||(54421407-54421473)
chr4 (4-68)||(23600141-23600205)
chr4 (11-59)||(38761389-38761437)
[»] chr7 (10 HSPs)
chr7 (4-123)||(31403776-31403895)
chr7 (31-137)||(3897948-3898054)
chr7 (56-149)||(3884123-3884216)
chr7 (9-69)||(18221472-18221532)
chr7 (4-77)||(41147764-41147837)
chr7 (4-68)||(43970061-43970125)
chr7 (9-59)||(27745733-27745783)
chr7 (4-70)||(31802482-31802548)
chr7 (55-149)||(42304924-42305018)
chr7 (4-77)||(12350734-12350807)
[»] chr3 (5 HSPs)
chr3 (4-77)||(4741588-4741661)
chr3 (6-59)||(54548327-54548380)
chr3 (11-65)||(38475633-38475687)
chr3 (6-53)||(52964150-52964197)
chr3 (1-41)||(51140165-51140205)
[»] chr5 (4 HSPs)
chr5 (6-70)||(10813145-10813209)
chr5 (4-77)||(23151279-23151352)
chr5 (4-77)||(28499186-28499259)
chr5 (6-71)||(6292456-6292521)
[»] scaffold0996 (1 HSPs)
scaffold0996 (4-70)||(1546-1612)
[»] scaffold0067 (1 HSPs)
scaffold0067 (4-77)||(10982-11055)
[»] scaffold0024 (1 HSPs)
scaffold0024 (23-71)||(69071-69119)


Alignment Details
Target: chr1 (Bit Score: 303; Significance: 1e-170; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 1 - 363
Target Start/End: Original strand, 4048452 - 4048814
Alignment:
Q  1 aagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacataactaacaataaaattattgcgag 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4048452 aagatatgggggctaggatgagataaagatgctctaactatagtgtgaacaactttatttgcttgcctcctgacataactaacaataaaattattgcgag 4048551  T
Q  101 ttgacaaaagattctgacatctactaatagtatctcctaattcattatggggaactgaagatgagtttactgcatctacaacaagcttgcaatcaaacta 200  Q
    |||||||||| | ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4048552 ttgacaaaaggtcctgacatctactaattgtatctcctaattcattgtggggaactgaagatgagtttactgcatctacaacaagcttgcaatcagacta 4048651  T
Q  201 aaaaagaactgattgatagccatgtgtgatagcaatcttgattgcttctaacaaccccaatgcttcagcttcagtaggagaggaggaaaagggagcataa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  4048652 aaaaagaactgattgatagccatgtgtgatagcaatcttgattgcttctaacagccccaatgctttagcttcagtaggagaggaggaaaagggagcataa 4048751  T
Q  301 tttgacattcctaacaagagctgatcggagaaatcatgaatgcagcagccataaccagtgatg 363  Q
    ||||||||||||||||| |||||| |||||||||||  |||||||||||||||||||||||||    
T  4048752 tttgacattcctaacaatagctgaccggagaaatcacaaatgcagcagccataaccagtgatg 4048814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 56 - 146
Target Start/End: Complemental strand, 43427491 - 43427401
Alignment:
Q  56 tatttgtttgcctcctgacataactaacaataaaattattgcgagttgacaaaagattctgacatctactaatagtatctcctaattcatt 146  Q
    |||||||||||||||||||||| || ||||||||||||||||||| |||||| ||||||| |||||||  |||| ||||||| || |||||    
T  43427491 tatttgtttgcctcctgacatagctcacaataaaattattgcgagatgacaatagattcttacatctagaaataatatctccaaactcatt 43427401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 28037726 - 28037679
Alignment:
Q  6 atgggggctaggatgagataaagatgctctagctatagtatgagcaac 53  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  28037726 atgggggctaggatgagataaagaagctctagctatactatgagcaac 28037679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 39501211 - 39501135
Alignment:
Q  1 aagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 77  Q
    ||||||||| ||||||| |||||||  ||||||||||| ||| ||| ||||||| |||||| ||||||||| |||||    
T  39501211 aagatatggaggctagggtgagatagtgatgctctagcaatactataagcaactctatttgcttgcctcctaacata 39501135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 7386745 - 7386682
Alignment:
Q  6 atgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctc 69  Q
    |||||||||||||| ||||||||| |||||||| ||  ||||||| |||||||||| |||||||    
T  7386745 atgggggctaggattagataaagaggctctagcaatgctatgagctactttatttgcttgcctc 7386682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 14651076 - 14651010
Alignment:
Q  1 aagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcc 70  Q
    |||||||||||||||||||||||||   |||||||||||||  |||| ||||| ||||||| ||||||||    
T  14651076 aagatatgggggctaggatgagata---atgctctagctatgctatgtgcaaccttatttgcttgcctcc 14651010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 14660867 - 14660801
Alignment:
Q  1 aagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcc 70  Q
    |||||||||||||||||||||||||   |||||||||||||  |||| ||||| ||||||| ||||||||    
T  14660867 aagatatgggggctaggatgagata---atgctctagctatgctatgtgcaaccttatttgcttgcctcc 14660801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 49508624 - 49508557
Alignment:
Q  4 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcct 71  Q
    |||||||||||||| || ||||| || |||||||||||  ||||||| || |||||||||||||||||    
T  49508624 atatgggggctagggtgggataaggaagctctagctatgttatgagctaccttatttgtttgcctcct 49508557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 45432875 - 45432812
Alignment:
Q  8 gggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcct 71  Q
    |||||||||| || ||||| || |||||||||||  ||||||| || |||||||||||||||||    
T  45432875 gggggctagggtgggataaggaagctctagctatgttatgagctaccttatttgtttgcctcct 45432812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 33978180 - 33978246
Alignment:
Q  4 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcc 70  Q
    |||||||||||||||||| |||| || |||||||| ||| ||||||||||  |||| | ||||||||    
T  33978180 atatgggggctaggatgacataaggaagctctagcaatactatgagcaaccctattagcttgcctcc 33978246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 38599090 - 38599037
Alignment:
Q  24 taaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 77  Q
    ||||||||||||||| ||| ||||||||||||||||   ||||||||| |||||    
T  38599090 taaagatgctctagcaatactatgagcaactttattatcttgcctcctaacata 38599037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 27643376 - 27643432
Alignment:
Q  13 ctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctc 69  Q
    ||||| |||||||| ||||||||||| ||| |||||||||| ||||| | |||||||    
T  27643376 ctagggtgagataaggatgctctagcaatactatgagcaaccttattagcttgcctc 27643432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 37670707 - 37670780
Alignment:
Q  4 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 77  Q
    |||||||||||||| || ||||||||||||||||| ||| ||||| ||||||||||||||||||| || |||||    
T  37670707 atatgggggctagggtgggataaagatgctctagcaatactatgaacaactttatttgtttgccttctaacata 37670780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 4244454 - 4244397
Alignment:
Q  12 gctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctc 69  Q
    ||||||||||||||||||||||||||||||| |||||||| || |||||| |||||||    
T  4244454 gctaggatgagataaagatgctctagctatactatgagcagctctatttgcttgcctc 4244397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 8323531 - 8323595
Alignment:
Q  1 aagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttg 65  Q
    |||||||||||| ||||||||||||| |||||||||| |||  |||| |||||||||||||||||    
T  8323531 aagatatgggggttaggatgagataaggatgctctagttatgctatgtgcaactttatttgtttg 8323595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 10748136 - 10748060
Alignment:
Q  1 aagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 77  Q
    |||||||| |||||||| |||||||  ||||||||||| ||| ||||||||||| |||||| ||||||||| |||||    
T  10748136 aagatatgagggctagggtgagatagtgatgctctagcaatattatgagcaactctatttgcttgcctcctaacata 10748060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 17247432 - 17247364
Alignment:
Q  55 ttatttgtttgcctcctgacataactaacaataaaattattgcgagttgacaaaagattctgacatcta 123  Q
    |||||||||||||| ||||||||| | ||||||||||||||||||| |||||| |||| || |||||||    
T  17247432 ttatttgtttgccttctgacataattcacaataaaattattgcgagatgacaatagatccttacatcta 17247364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 36756954 - 36757020
Alignment:
Q  4 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcc 70  Q
    ||||||||||||||||| ||||| || |||||||| ||| |||||||||||||||| | ||||||||    
T  36756954 atatgggggctaggatgtgataaggaagctctagcaatactatgagcaactttattagcttgcctcc 36757020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 43115106 - 43115039
Alignment:
Q  4 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcct 71  Q
    |||||||||||||| || ||||| || |||||||||||  ||||||| || |||||||||||||||||    
T  43115106 atatgggggctagggtgggataaggaagctctagctatgttatgagctaccttatttgtttgcctcct 43115039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 648596 - 648532
Alignment:
Q  7 tgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcct 71  Q
    ||||||||||| || |||||||| |||||||||||  ||||||| ||| |||||| |||||||||    
T  648596 tgggggctaggttgtgataaagaagctctagctatgctatgagccactctatttgcttgcctcct 648532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 30928294 - 30928232
Alignment:
Q  9 ggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcct 71  Q
    ||||| |||||||||||| |  |||||||| ||| |||||||||| |||||| ||||||||||    
T  30928294 ggggcgaggatgagataaggcggctctagcaatactatgagcaaccttatttatttgcctcct 30928232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 4017117 - 4017182
Alignment:
Q  6 atgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcct 71  Q
    |||||||||||| | |||||| |||||||| ||||| | ||||||||| | ||||| |||||||||    
T  4017117 atgggggctagggttagataaggatgctcttgctatggaatgagcaacctcatttgcttgcctcct 4017182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 24467378 - 24467313
Alignment:
Q  6 atgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcct 71  Q
    |||||||||||| | |||||| |||||||| ||||| | ||||||||| | ||||| |||||||||    
T  24467378 atgggggctagggttagataaggatgctcttgctatggaatgagcaacctcatttgcttgcctcct 24467313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 33054918 - 33054866
Alignment:
Q  1 aagatatgggggctaggatgagataaagatgctctagctatagtatgagcaac 53  Q
    ||||||| ||||||||| |||||||  ||||||||||||||||  ||||||||    
T  33054918 aagatataggggctagggtgagatagggatgctctagctatagagtgagcaac 33054866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 9180725 - 9180801
Alignment:
Q  1 aagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 77  Q
    ||||||||||||||||| |||||||  ||||||||||| ||| ||||||||||| |||||| ||||||||| |||||    
T  9180725 aagatatgggggctagggtgagatagtgatgctctagcaatattatgagcaactctatttgcttgcctcctaacata 9180801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 11629586 - 11629510
Alignment:
Q  1 aagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 77  Q
    ||||||||||| ||||| |||||||| ||||||||||| ||| ||||||||||| |||||| ||||||||| |||||    
T  11629586 aagatatggggcctagggtgagataatgatgctctagcaatactatgagcaactctatttgcttgcctcctaacata 11629510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 34752684 - 34752760
Alignment:
Q  1 aagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 77  Q
    ||||||||||||||||| |||||||  ||||||||||| ||| ||||||||| | |||||| ||||||||| |||||    
T  34752684 aagatatgggggctagggtgagatagtgatgctctagcaatactatgagcaattctatttgcttgcctcctaacata 34752760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 10394715 - 10394649
Alignment:
Q  4 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcc 70  Q
    |||| |||| ||||||||||||||||||| ||||| ||| |||||| ||| ||||||||||||||||    
T  10394715 atataggggttaggatgagataaagatgcgctagcaatactatgagtaaccttatttgtttgcctcc 10394649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 5896310 - 5896377
Alignment:
Q  4 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcct 71  Q
    ||||||||||||||||||||||| |  |||||||| ||| ||||||| ||| |||||  |||||||||    
T  5896310 atatgggggctaggatgagataaggcagctctagcaatactatgagctactatattttcttgcctcct 5896377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 35613689 - 35613624
Alignment:
Q  6 atgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcct 71  Q
    |||||||||||| | |||||| |||||||| ||||| | ||||||||| | ||||| |||||||||    
T  35613689 atgggggctagggttagataaggatgctcttgctatggaatgagcaacctcatttgcttgcctcct 35613624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 16484161 - 16484217
Alignment:
Q  13 ctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctc 69  Q
    ||||| |||||||| ||||||||||| ||| |||||||||| ||||| | |||||||    
T  16484161 ctagggtgagataaggatgctctagcaatactatgagcaaccttattagcttgcctc 16484217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 32230002 - 32230114
Alignment:
Q  11 ggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacataactaacaataaaattattgcgagttgacaaaag 110  Q
    ||||||| |||||||| || |||||||||||||| ||||| ||  |||||  || |||||  ||||  || ||||||||||||||||| | || ||| ||    
T  32230002 ggctagggtgagataaggaagctctagctatagtgtgagcgaccctatttacttacctccgaacatgcctcacaataaaattattgcgggctgccaatag 32230101  T
Q  111 attctgacatcta 123  Q
    || || |||||||    
T  32230102 atccttacatcta 32230114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 10158949 - 10159025
Alignment:
Q  1 aagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 77  Q
    ||||||||||||||||| |||||||  ||||||||||| ||| ||||||||||| |||||| ||||||||| |||||    
T  10158949 aagatatgggggctagggtgagatagtgatgctctagcaatattatgagcaactctatttgcttgcctcctaacata 10159025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14453395 - 14453436
Alignment:
Q  1 aagatatgggggctaggatgagataaagatgctctagctata 42  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  14453395 aagatatgggggctaggatgagataaggatgctctagctata 14453436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 21729826 - 21729895
Alignment:
Q  1 aagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcc 70  Q
    |||||||||||||||||||||||||| |||| | |||||||  |||| ||||| ||||||| ||||||||    
T  21729826 aagatatgggggctaggatgagataaggatgttgtagctatgctatgtgcaaccttatttggttgcctcc 21729895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 25357718 - 25357649
Alignment:
Q  9 ggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacataa 78  Q
    ||||||||||||||||||  |  |||||||||   ||||||| || ||||||| ||||||||||||||||    
T  25357718 ggggctaggatgagataagaaaactctagctaagttatgagctaccttatttgcttgcctcctgacataa 25357649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 42327897 - 42327973
Alignment:
Q  1 aagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 77  Q
    ||||||||||||||||| |||||||  ||||||||||| ||| ||||||||||| |||||| ||||||||| |||||    
T  42327897 aagatatgggggctagggtgagatagtgatgctctagcaatattatgagcaactctatttgcttgcctcctaacata 42327973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 115 - 316
Target Start/End: Complemental strand, 26021970 - 26021769
Alignment:
Q  115 tgacatctactaatagtatctcctaattcattatggggaactgaagatgagtttactgcatctacaacaagcttgcaatcaaactaaaaaagaactgatt 214  Q
    ||||| ||||||||| ||||||| | |||||| |||||||||   || || ||||| | ||| |||||||||||||| || |||| ||| | ||| |||     
T  26021970 tgacacctactaataatatctccaacttcattctggggaacttgtgaagaatttaccgtatcaacaacaagcttgcagtctaactcaaatataacagatg 26021871  T
Q  215 gatagccatgtgtgatagcaatcttgattgcttctaacaaccccaatgcttcagcttcagtaggagaggaggaaaagggagcataatttgacattcctaa 314  Q
    || | ||| ||   ||||||| ||| ||||||||||||||||||||| | || |||||||  ||| | ||||| |||| |||||| |  |||||||||||    
T  26021870 gaaaaccacgttcaatagcaagctttattgcttctaacaaccccaatccctcggcttcaggtggaaaagaggataaggaagcatagtcggacattcctaa 26021771  T
Q  315 ca 316  Q
    ||    
T  26021770 ca 26021769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 39956324 - 39956211
Alignment:
Q  15 aggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacataactaacaataaaattattgcgagttgacaaaagattc 114  Q
    |||||||||||| || | |||||||||| |||||  ||||||||||||||| || ||||||||||| ||||||||  ||||| ||| ||| || |||| |    
T  39956324 aggatgagataaggaggatctagctatattatgaataactttatttgtttgtcttctgacataactcacaataaaggtattgtgagatgataatagatcc 39956225  T
Q  115 tgacatctactaat 128  Q
    | ||||||| ||||    
T  39956224 ttacatctagtaat 39956211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 32499629 - 32499556
Alignment:
Q  4 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 77  Q
    ||||||||||||||||||||||  || |||| ||| ||| ||||||||||  |||||| ||||||||| |||||    
T  32499629 atatgggggctaggatgagatagcgaagctcgagcaatactatgagcaacactatttgcttgcctcctaacata 32499556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 42440985 - 42441038
Alignment:
Q  19 tgagataaagatgctctagctatagtatgagcaactttatttg-tttgcctcct 71  Q
    |||||||||||||||||||| | |||||||||||||||||| | ||||||||||    
T  42440985 tgagataaagatgctctagcaacagtatgagcaactttattagctttgcctcct 42441038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 43733996 - 43733928
Alignment:
Q  1 aagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctc 69  Q
    |||||||||||||||||||||||||| |  |||||||| ||| ||||||| ||  |||||| |||||||    
T  43733996 aagatatgggggctaggatgagataaggcagctctagcaatactatgagctaccatatttgcttgcctc 43733928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 5185480 - 5185527
Alignment:
Q  6 atgggggctaggatgagataaagatgctctagctatagtatgagcaac 53  Q
    |||||||||| |||||||||| || |||||||||||| ||||||||||    
T  5185480 atgggggctaagatgagataaggaagctctagctatactatgagcaac 5185527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 16431045 - 16430971
Alignment:
Q  9 ggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacataactaac 83  Q
    |||||||||||||||||| ||  ||| |||||   |||||||||| ||||||| ||||||||| |||| ||||||    
T  16431045 ggggctaggatgagataaggaacctcgagctaacatatgagcaaccttatttgcttgcctcctaacatgactaac 16430971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 54421407 - 54421473
Alignment:
Q  4 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcc 70  Q
    ||||||||||||||||| ||||| || |||||||| ||| ||||| |||| ||||| | ||||||||    
T  54421407 atatgggggctaggatgtgataaggaagctctagcaatactatgaccaaccttattagcttgcctcc 54421473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 23600141 - 23600205
Alignment:
Q  4 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcct 68  Q
    |||||||||||||  ||| |||  ||||||||||||||| |||||||||   |||||||||||||    
T  23600141 atatgggggctagtgtgatatagggatgctctagctatattatgagcaataatatttgtttgcct 23600205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 38761389 - 38761437
Alignment:
Q  11 ggctaggatgagataaagatgctctagctatagtatgagcaactttatt 59  Q
    ||||||| |||||||| ||||||||||| ||| |||||||||| |||||    
T  38761389 ggctagggtgagataaggatgctctagcaatactatgagcaaccttatt 38761437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 6e-16; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 31403895 - 31403776
Alignment:
Q  4 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacataactaacaataaaattattgcgagttg 103  Q
    |||||| ||||||| ||||||||  | |||||||||||  ||||||| ||  |||||||||| ||||||||||| || ||||||||||||||| ||| ||    
T  31403895 atatggaggctagggtgagataagaaagctctagctatgttatgagctaccctatttgtttgtctcctgacatagctcacaataaaattattgtgagatg 31403796  T
Q  104 acaaaagattctgacatcta 123  Q
    | || |||| || |||||||    
T  31403795 ataatagatccttacatcta 31403776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 31 - 137
Target Start/End: Original strand, 3897948 - 3898054
Alignment:
Q  31 gctctagctatagtatgagcaactttatttgtttgcctcctgacataactaacaataaaattattgcgagttgacaaaagattctgacatctactaatag 130  Q
    |||||||||||  ||||||| || |||||| ||||||| ||||||| ||| ||||||||||||||  ||| |||||| |||| || |||||||  ||||     
T  3897948 gctctagctatgttatgagctaccttatttatttgccttctgacattactcacaataaaattattatgagatgacaatagatccttacatctataaataa 3898047  T
Q  131 tatctcc 137  Q
    |||||||    
T  3898048 tatctcc 3898054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 149
Target Start/End: Original strand, 3884123 - 3884216
Alignment:
Q  56 tatttgtttgcctcctgacataactaacaataaaattattgcgagttgacaaaagattctgacatctactaatagtatctcctaattcattatg 149  Q
    |||||| ||| |||||||||| ||| ||||||||||||||| ||| |||||| |||| || |||||||  |||| ||||||| || ||||||||    
T  3884123 tatttgcttgtctcctgacattactcacaataaaattattgtgagatgacaatagatccttacatctagaaataatatctccgaactcattatg 3884216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 18221472 - 18221532
Alignment:
Q  9 ggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctc 69  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||| ||||| | |||||||    
T  18221472 ggggctagggtgagataaggatgctctagcaatagtatgagcaaccttattagcttgcctc 18221532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 41147837 - 41147764
Alignment:
Q  4 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 77  Q
    ||||||||||||||||||||||  || |||| ||| ||| ||||||||||  |||||| ||||||||| |||||    
T  41147837 atatgggggctaggatgagatagcgaagctcgagcaatactatgagcaacactatttgcttgcctcctaacata 41147764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 43970125 - 43970061
Alignment:
Q  4 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcct 68  Q
    ||||||||||||||||  ||||| || |||||||| ||| |||||||||| ||||||| ||||||    
T  43970125 atatgggggctaggattggataaggacgctctagcaatactatgagcaaccttatttgcttgcct 43970061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 27745733 - 27745783
Alignment:
Q  9 ggggctaggatgagataaagatgctctagctatagtatgagcaactttatt 59  Q
    ||||||||| |||||||| ||||||||||| ||| |||||||||| |||||    
T  27745733 ggggctagggtgagataaggatgctctagcgatactatgagcaaccttatt 27745783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 31802548 - 31802482
Alignment:
Q  4 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcc 70  Q
    |||||| ||||||||||| |||| || |||||||| ||| |||||||||| ||||| | ||||||||    
T  31802548 atatggaggctaggatgacataaggaagctctagcaatactatgagcaaccttattagcttgcctcc 31802482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 42304924 - 42305018
Alignment:
Q  55 ttatttgtttgcctcctgacataactaacaataaaattattgcgagttgacaaaagattctgacatctactaatagtatctcctaattcattatg 149  Q
    ||||||||||||||||| ||||| || | ||||||||||||| ||| |||||| |||| |  |||||||  ||||  |||||| || ||||||||    
T  42304924 ttatttgtttgcctcctcacatagctcaaaataaaattattgtgagatgacaatagatccatacatctagaaataacatctccgaactcattatg 42305018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 12350734 - 12350807
Alignment:
Q  4 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 77  Q
    ||||||||| ||||||||||||  || |||| ||| ||| ||||||||||  |||||| ||||||||| |||||    
T  12350734 atatgggggataggatgagatagcgaagctcgagcaatactatgagcaacaatatttgcttgcctcctaacata 12350807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 4741588 - 4741661
Alignment:
Q  4 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 77  Q
    |||||||||||||| |  ||||||||||||||||| ||| |||||||||||||||| |  |||||||| |||||    
T  4741588 atatgggggctagggttggataaagatgctctagcaatactatgagcaactttattagcgtgcctcctaacata 4741661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 54548327 - 54548380
Alignment:
Q  6 atgggggctaggatgagataaagatgctctagctatagtatgagcaactttatt 59  Q
    ||||||||||||||||||||| || |||||||||||| ||||||||||| ||||    
T  54548327 atgggggctaggatgagataaggaagctctagctatactatgagcaactctatt 54548380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 38475687 - 38475633
Alignment:
Q  11 ggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttg 65  Q
    ||||||| |||||||| |||||||||| |||| |||| |||||||||||||||||    
T  38475687 ggctagggtgagataaggatgctctagttatactatgtgcaactttatttgtttg 38475633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 52964150 - 52964197
Alignment:
Q  6 atgggggctaggatgagataaagatgctctagctatagtatgagcaac 53  Q
    ||||||||||||||||||||| || | |||||||||| ||||||||||    
T  52964150 atgggggctaggatgagataaggaagatctagctatactatgagcaac 52964197  T

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Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 51140165 - 51140205
Alignment:
Q  1 aagatatgggggctaggatgagataaagatgctctagctat 41  Q
    ||||||||||||||||||||  |||| ||||||||||||||    
T  51140165 aagatatgggggctaggatggcataaggatgctctagctat 51140205  T

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Target: chr5 (Bit Score: 37; Significance: 0.000000000009; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 10813145 - 10813209
Alignment:
Q  6 atgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcc 70  Q
    ||||||||||||||||||||| || |||||||||||| ||||||||||  |||| | ||||||||    
T  10813145 atgggggctaggatgagataaggaagctctagctatactatgagcaaccctattagcttgcctcc 10813209  T

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Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 23151352 - 23151279
Alignment:
Q  4 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 77  Q
    ||||||||||||||||||||||  || |||| ||| ||| ||||||||||  |||||| ||||||||| |||||    
T  23151352 atatgggggctaggatgagatagcgaagctcgagcaatactatgagcaacactatttgcttgcctcctaacata 23151279  T

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Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 28499259 - 28499186
Alignment:
Q  4 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 77  Q
    ||||||||||||||||||||||  || |||| ||| ||| ||||||||||  |||||| ||||||||| |||||    
T  28499259 atatgggggctaggatgagatagcgaagctcgagcaatactatgagcaacactatttgcttgcctcctaacata 28499186  T

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Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 6292456 - 6292521
Alignment:
Q  6 atgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcct 71  Q
    |||||||||||| | |||||| |||||||| ||||| | ||||||||| | ||||| |||||||||    
T  6292456 atgggggctagggttagataaggatgctcttgctatggaatgagcaacctcatttgcttgcctcct 6292521  T

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Target: scaffold0996 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0996
Description:

Target: scaffold0996; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 1546 - 1612
Alignment:
Q  4 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcc 70  Q
    |||||||||||||||||| |||| || |||||||| ||| ||||||||||  |||| | ||||||||    
T  1546 atatgggggctaggatgacataaggaagctctagcaatactatgagcaaccctattagcttgcctcc 1612  T

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Target: scaffold0067 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 10982 - 11055
Alignment:
Q  4 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 77  Q
    ||||||||||||||||||||||  || |||| ||| ||| || |||||||  |||||| ||||||||| |||||    
T  10982 atatgggggctaggatgagatagcgaagctcgagcaatactacgagcaacactatttgcttgcctcctaacata 11055  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 69071 - 69119
Alignment:
Q  23 ataaagatgctctagctatagtatgagcaactttatttgtttgcctcct 71  Q
    ||||||| |||||||| ||| |||||||||||||||||| ||| |||||    
T  69071 ataaagacgctctagcgatactatgagcaactttatttgcttgtctcct 69119  T

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