View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21672_high_31 (Length: 336)
Name: NF21672_high_31
Description: NF21672
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21672_high_31 |
 | |
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| [»] chr3 (10 HSPs) |
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| [»] scaffold0384 (1 HSPs) |
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| [»] scaffold0113 (1 HSPs) |
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| [»] chr5 (6 HSPs) |
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| [»] scaffold0012 (2 HSPs) |
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| [»] scaffold0220 (1 HSPs) |
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| [»] scaffold0026 (2 HSPs) |
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| [»] scaffold0290 (1 HSPs) |
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| [»] scaffold0402 (1 HSPs) |
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| [»] scaffold0059 (2 HSPs) |
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| [»] scaffold0013 (1 HSPs) |
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| [»] scaffold0346 (1 HSPs) |
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| [»] scaffold0222 (1 HSPs) |
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| [»] scaffold0216 (1 HSPs) |
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| [»] scaffold0156 (1 HSPs) |
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| [»] scaffold0022 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 259; Significance: 1e-144; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 39 - 336
Target Start/End: Complemental strand, 13090907 - 13090609
Alignment:
| Q |
39 |
gtcagtggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaag |
138 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |
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|
| T |
13090907 |
gtcaatggcatcaaaaaggaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacagcccgcaatcatgggatccaattcaag |
13090808 |
T |
|
| Q |
139 |
gattccaagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
238 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
13090807 |
gattccgagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
13090708 |
T |
|
| Q |
239 |
aacatgtgattaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtag-aaaaaaggtagaaa |
336 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |
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|
| T |
13090707 |
aacatgtgattaggctgttgaataaattcacaaccctgtgcttaggtaccttcacacggttattgcttgcaccatatggggtagaaaaaaaggtagaaa |
13090609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 39 - 333
Target Start/End: Original strand, 20559156 - 20559450
Alignment:
| Q |
39 |
gtcagtggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaag |
138 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |
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|
| T |
20559156 |
gtcaatggcatcaaaaaggaaaggtgaggatattgaagcctccggaagtggtgcaagcaagaagcaatcaacaacccgcaatcatgggatccaattcaag |
20559255 |
T |
|
| Q |
139 |
gattccaagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
238 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |
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|
| T |
20559256 |
gattccgagcaaagaaataggtataaatctctaatctctagaactatctctccttgcaggtaccttgatgttaatgctatggatagactagaaatagatg |
20559355 |
T |
|
| Q |
239 |
aacatgtgattaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggtag |
333 |
Q |
| |
|
||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
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|
| T |
20559356 |
aacatatgattcggctgttgaataaattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggggtagaaaagaggtag |
20559450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 39 - 333
Target Start/End: Original strand, 20561464 - 20561758
Alignment:
| Q |
39 |
gtcagtggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaag |
138 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |
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|
| T |
20561464 |
gtcaatggcatcaaaaaggaaaggtgaggatattgaagcctccggaagtggtgcaagcaagaagcaatcaacaacccgcaatcatgggatccaattcaag |
20561563 |
T |
|
| Q |
139 |
gattccaagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
238 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |
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|
| T |
20561564 |
gattccgagcaaagaaataggtataaatctctaatctctagaactatctctccttgcaggtaccttgatgttaatgctatggatagactagaaatagatg |
20561663 |
T |
|
| Q |
239 |
aacatgtgattaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggtag |
333 |
Q |
| |
|
||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
20561664 |
aacatatgattcggctgttgaataaattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggggtagaaaagaggtag |
20561758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 39 - 333
Target Start/End: Original strand, 20563772 - 20564066
Alignment:
| Q |
39 |
gtcagtggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaag |
138 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |
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|
| T |
20563772 |
gtcaatggcatcaaaaaggaaaggtgaggatattgaagcctccggaagtggtgcaagcaagaagcaatcaacaacccgcaatcatgggatccaattcaag |
20563871 |
T |
|
| Q |
139 |
gattccaagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
238 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
20563872 |
gattccgagcaaagaaataggtataaatctctaatctctagaactatctctccttgcaggtaccttgatgttaatgctatggatagactagaaatagatg |
20563971 |
T |
|
| Q |
239 |
aacatgtgattaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggtag |
333 |
Q |
| |
|
||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
20563972 |
aacatatgattcggctgttgaataaattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggggtagaaaagaggtag |
20564066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 39 - 333
Target Start/End: Complemental strand, 12778605 - 12778311
Alignment:
| Q |
39 |
gtcagtggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaag |
138 |
Q |
| |
|
|||| |||||| ||||| | |||||||| | ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
12778605 |
gtcaatggcataaaaaacgtaaggtgagaagattgaagcctccggaagtggtgcaagcaagaagcaatcaacaacccgcaatcatgggatccaattcaag |
12778506 |
T |
|
| Q |
139 |
gattccaagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
238 |
Q |
| |
|
||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
12778505 |
gattctgagcaaagaaataggtataaatctctaatctctagaactatctcttcttgcaggtaccttgatgttaatgctatggatagactagaaatagatg |
12778406 |
T |
|
| Q |
239 |
aacatgtgattaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggtag |
333 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
12778405 |
aacatgtgattaggctgttgaataaattcacaaccctgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaagaggtag |
12778311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 51 - 333
Target Start/End: Original strand, 13095831 - 13096115
Alignment:
| Q |
51 |
aaaaatgaaaggtgaggatattgaagcctccggaagag--gtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaaggattccaagc |
148 |
Q |
| |
|
||||| || ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |
|
|
| T |
13095831 |
aaaaaggagaggtgaggatattgaagcctctggaagagaggtgcaagcaagaagcaatcaacaacccgcaatcatgggatccaattcaaggattccgagc |
13095930 |
T |
|
| Q |
149 |
aaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatgaacatgtgat |
248 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
13095931 |
aaagaaataggtataaatctctaatctctagaactatctctccttgcaggtaccttgatgttaatgctatggatagactagaaatagataaacatgtgat |
13096030 |
T |
|
| Q |
249 |
taggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggtag |
333 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
13096031 |
taggctattgaataaattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggggtagaaaaaaggtag |
13096115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 44 - 333
Target Start/End: Complemental strand, 9363036 - 9362748
Alignment:
| Q |
44 |
tggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaaggattc |
143 |
Q |
| |
|
|||||||||||| ||||||| | ||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |
|
|
| T |
9363036 |
tggcatcaaaaaggaaaggtaaa-atactgaagcctccggaagaggtgcaagcaagaagcaatcaacaacccacaatcatgggatccaattcaaggattc |
9362938 |
T |
|
| Q |
144 |
caagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatgaacat |
243 |
Q |
| |
|
| ||||||||||||||||||| |||||||||||| || ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
9362937 |
cgagcaaagaaataggtataaatctctaatctcttgatctatctctccttgcaggtaccttgatgttaatgctatggatagactagaaatagatgaacat |
9362838 |
T |
|
| Q |
244 |
gtgattaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggtag |
333 |
Q |
| |
|
||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
9362837 |
gtgattaggttgttgaataaattcacaaccatgtgcttaggtaccttcacacggttattgcttgcaccatatggggtagaaaaaaggtag |
9362748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 48 - 332
Target Start/End: Original strand, 15023826 - 15024110
Alignment:
| Q |
48 |
atcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaaggattccaag |
147 |
Q |
| |
|
|||||| | ||||||| | || |||||||||| | ||||||||||||||||||||||||||| | |||||||||||||||| || |||||||| || || |
|
|
| T |
15023826 |
atcaaagaggaaaggtaaagagattgaagccttcagaagaggtgcaagcaagaagcaatcaatagcccgcaatcatgggatcgaactcaaggatcccgag |
15023925 |
T |
|
| Q |
148 |
caaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatgaacatgtga |
247 |
Q |
| |
|
||||| |||| || ||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||| ||| |
|
|
| T |
15023926 |
caaaggaatatgtttaaatctctaatctctagaactatctctccttgcaggtaccatgatgttaaagctatggatagactagaaatagatgaacatatga |
15024025 |
T |
|
| Q |
248 |
ttaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggta |
332 |
Q |
| |
|
||||| ||||||||| |||||||||| ||| |||||| |||||| || |||||| ||||||||||||| | |||| ||| ||||| |
|
|
| T |
15024026 |
ttaggttgttgaataaattcacaaccctgttcttaggcaccttcccaaggttatggcttgcaccatatagggtaggaaagaggta |
15024110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 313
Target Start/End: Original strand, 17386102 - 17386151
Alignment:
| Q |
264 |
attcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccat |
313 |
Q |
| |
|
|||||||||| |||||||||||||||||| | |||||| ||||||||||| |
|
|
| T |
17386102 |
attcacaaccctgtgcttaggtaccttcaaagggttatggcttgcaccat |
17386151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 3273066 - 3273124
Alignment:
| Q |
264 |
attcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtag |
322 |
Q |
| |
|
|||||||||| |||||||||||| ||||| | |||||| ||||||||||| ||| |||| |
|
|
| T |
3273066 |
attcacaaccatgtgcttaggtatcttcaaagggttatggcttgcaccatctggggtag |
3273124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0384 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: scaffold0384
Description:
Target: scaffold0384; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 39 - 326
Target Start/End: Complemental strand, 15171 - 14884
Alignment:
| Q |
39 |
gtcagtggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaag |
138 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||| |
|
|
| T |
15171 |
gtcaatggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacagcccgcaatcatgggattcaattcaag |
15072 |
T |
|
| Q |
139 |
gattccaagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
238 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15071 |
gattccgagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
14972 |
T |
|
| Q |
239 |
aacatgtgattaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaa |
326 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
14971 |
aacatgtgattaggctgttgaataaattcacaaccctgtgcttaggtaccttcacacggttattgcttgcaccatatggggtagaaaa |
14884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0113 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: scaffold0113
Description:
Target: scaffold0113; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 39 - 336
Target Start/End: Complemental strand, 38734 - 38437
Alignment:
| Q |
39 |
gtcagtggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaag |
138 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
38734 |
gtcaatggcatcaaaaaggaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacatcccgcaatcatgggatccaattcaag |
38635 |
T |
|
| Q |
139 |
gattccaagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
238 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38634 |
gattccgagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
38535 |
T |
|
| Q |
239 |
aacatgtgattaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggtagaaa |
336 |
Q |
| |
|
| |||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
38534 |
atcatgtgattaggctgttgaataaattcacaaccctgtgcttaggtacgttcacacggttattgcttgcaccataaggggtagaaaaaaggtagaaa |
38437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 250; Significance: 1e-139; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 39 - 336
Target Start/End: Complemental strand, 23602737 - 23602440
Alignment:
| Q |
39 |
gtcagtggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaag |
138 |
Q |
| |
|
|||| |||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
23602737 |
gtcaatggcatcaaaaacgaaaggtgatgatattgaagcctccggaagaggtgcaattaagaagcaatcaacagcccgcaatcatgggatccaattcaag |
23602638 |
T |
|
| Q |
139 |
gattccaagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
238 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23602637 |
gattctgagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
23602538 |
T |
|
| Q |
239 |
aacatgtgattaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggtagaaa |
336 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
23602537 |
aacatgtgattaggttgttgaataaattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggggtagaaaaaaggtagaaa |
23602440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 39 - 333
Target Start/End: Complemental strand, 20446944 - 20446650
Alignment:
| Q |
39 |
gtcagtggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaag |
138 |
Q |
| |
|
|||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
20446944 |
gtcaatggcatcaaaaaggaaaggtgaggacattgaagcctccggaagaggtgcaagcaagaagcaatcaacagcccgcaatcatgggatccaattcaag |
20446845 |
T |
|
| Q |
139 |
gattccaagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
238 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20446844 |
gattccgagcaaagaaataggtataattctctaatctatagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
20446745 |
T |
|
| Q |
239 |
aacatgtgattaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggtag |
333 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| | |||||||||||||||||| |||||| ||||||||||||||| |||||||| |||||| |
|
|
| T |
20446744 |
aacatgtgattaggctgttgaataaattcacaaccctatgcttaggtaccttcacatggttatggcttgcaccatatggggtagaaaagaggtag |
20446650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 39 - 336
Target Start/End: Original strand, 24938656 - 24938952
Alignment:
| Q |
39 |
gtcagtggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaag |
138 |
Q |
| |
|
|||| |||||||||||| |||||||||| | ||||| |||||| ||| ||||||||||||||||||||||| ||| ||||||||||| ||||||||| |
|
|
| T |
24938656 |
gtcaatggcatcaaaaaggaaaggtgagaagattgacgcctccaaaagtggtgcaagcaagaagcaatcaacaacccg-aatcatgggattcaattcaag |
24938754 |
T |
|
| Q |
139 |
gattccaagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
238 |
Q |
| |
|
|||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24938755 |
gattccgagcaaagaaatatgtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
24938854 |
T |
|
| Q |
239 |
aacatgtgattaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggtagaaa |
336 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
24938855 |
aacatgtgattaggttgttgaataaattcacaaccctgtgcttaggtaccttcacacggttattgcttgcaccatatggggtagaaaaaaggtagaaa |
24938952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 47 - 333
Target Start/End: Complemental strand, 23712789 - 23712504
Alignment:
| Q |
47 |
catcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaaggattccaa |
146 |
Q |
| |
|
||||||||| |||||||||| | |||||||||||| ||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| | |
|
|
| T |
23712789 |
catcaaaaaggaaaggtgagaagattgaagcctccaaaagtggtgcaagcaagaagcaatcaacaacccg-aatcatgggatccaattcaaggattccga |
23712691 |
T |
|
| Q |
147 |
gcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatgaacatgtg |
246 |
Q |
| |
|
|||||| ||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
23712690 |
gcaaagcaataggtataagtatctaatctctagaactatctctccttgcaggtaccttgatgttaatgatatggatagactagaaatagatgaacatgtg |
23712591 |
T |
|
| Q |
247 |
attaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggtag |
333 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
23712590 |
attaggctgttgaataaattcacaaccctgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaagaggtag |
23712504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 44 - 333
Target Start/End: Original strand, 24217954 - 24218243
Alignment:
| Q |
44 |
tggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaaggattc |
143 |
Q |
| |
|
|||||||||| | |||| | ||||| ||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
24217954 |
tggcatcaaagaggaaaagcgaggagattgaagcctccggaagtggtgcaagcaagaagcaatcaacaacccg-aatcatgggatccaattcaaggattc |
24218052 |
T |
|
| Q |
144 |
caagcaaagaaataggtataattctctaa-tctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatgaaca |
242 |
Q |
| |
|
| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
24218053 |
cgagcaaagaaataggtataaatctctaaatctctagaactatctctccttgcagttaccttgatgttaatgctatggatagactagaaatagatgaaca |
24218152 |
T |
|
| Q |
243 |
tgtgattaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggtag |
333 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
24218153 |
tgtgattaggctgttgaataaattcacaaccctgtgcttaggtaccttcacacggttatggcttgcaccatatggggtagaaaaaaggtag |
24218243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 47 - 333
Target Start/End: Complemental strand, 21283001 - 21282715
Alignment:
| Q |
47 |
catcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaaggattccaa |
146 |
Q |
| |
|
||||||| | |||| | ||||| ||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| | |
|
|
| T |
21283001 |
catcaaagaggaaaagcgaggagattgaagcctccggaagtggtgcaagcaagaagcaatcaaca-acctgaatcatgggatccaattcaaggattccga |
21282903 |
T |
|
| Q |
147 |
gcaaagaaataggtataattctctaa-tctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatgaacatgt |
245 |
Q |
| |
|
|||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
21282902 |
gcaaagaaataggtataaatctctaaatctctagaactatctctccttgcaggtaccttgatgttaatgctatggatagactagaaataaatgaacatgt |
21282803 |
T |
|
| Q |
246 |
gattaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggtag |
333 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
21282802 |
gattaggctgttgaataaattcacaaccctgtgcttaggtaccttcacacggttatggcttgcaccatatggggtagaaaaaaggtag |
21282715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 243; Significance: 1e-135; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 39 - 329
Target Start/End: Original strand, 10628864 - 10629154
Alignment:
| Q |
39 |
gtcagtggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaag |
138 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
10628864 |
gtcaatggcatcaaaaacgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacagcccgcaatcatgggatccaattcaag |
10628963 |
T |
|
| Q |
139 |
gattccaagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
238 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
10628964 |
gattccgagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttgaatagactagaaatagatg |
10629063 |
T |
|
| Q |
239 |
aacatgtgattaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaag |
329 |
Q |
| |
|
|||||||||| ||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
10629064 |
aacatgtgatcaggctgttgaataaattaacaaccctgtgcttaggtaccttcacacggttattgcttgcaccttatggggtagaaaaaag |
10629154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 39 - 333
Target Start/End: Complemental strand, 45240959 - 45240665
Alignment:
| Q |
39 |
gtcagtggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaag |
138 |
Q |
| |
|
|||| ||||| |||||| |||||||||| | ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
45240959 |
gtcaatggcaacaaaaaggaaaggtgagaagattgaagcctccggaagtggtgcaagcaagaagcaatcaacaacccgcaatcatgggatccaattcaag |
45240860 |
T |
|
| Q |
139 |
gattccaagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
238 |
Q |
| |
|
|||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||| |||||||||||| |
|
|
| T |
45240859 |
gattccgatcaaagaaataggtataaatctctaatctctagaactatctctccttgcaggtaccttgatgttaatgttatggatagattagaaatagatg |
45240760 |
T |
|
| Q |
239 |
aacatgtgattaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggtag |
333 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||| |
|
|
| T |
45240759 |
aacatgtgattaggctattgaataaattcacaaccctgtgcttaggtaccttcacacggttatggcttgcaccatatggggtagaaaagaggtag |
45240665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 11919009 - 11918891
Alignment:
| Q |
144 |
caagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatgaacat |
243 |
Q |
| |
|
||||||||| | || |||||| ||||| ||||||||| ||| ||| |||| || |||||||||||||||||| |||||||||||| ||||| || ||| |
|
|
| T |
11919009 |
caagcaaaggagtatgtataaatctcttatctctagacttatttctgcttgtagataccctgatgttaatgctatggatagactaggtatagaagaccat |
11918910 |
T |
|
| Q |
244 |
gtgattaggctgttgaata |
262 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
11918909 |
gtgattaggctgttgaata |
11918891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 315
Target Start/End: Complemental strand, 11918573 - 11918522
Alignment:
| Q |
264 |
attcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatat |
315 |
Q |
| |
|
|||||||||| |||||||||||||||||| | |||||| ||||||||||||| |
|
|
| T |
11918573 |
attcacaaccatgtgcttaggtaccttcaaagggttatggcttgcaccatat |
11918522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 242; Significance: 1e-134; HSPs: 9)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 39 - 328
Target Start/End: Original strand, 17618854 - 17619143
Alignment:
| Q |
39 |
gtcagtggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaag |
138 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
17618854 |
gtcaatggcatcaaaaaggaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacagcccgcaatcatgggatccaattcaag |
17618953 |
T |
|
| Q |
139 |
gattccaagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
238 |
Q |
| |
|
|||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
17618954 |
gattccgagcaaaaaaataggtataaatctctaatctctagaactatctctccttgcaggtaccttgatgttaatgctatggatagactagaaatagatg |
17619053 |
T |
|
| Q |
239 |
aacatgtgattaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaa |
328 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
17619054 |
aacatgtgattaggctgttgaataaattcacaaccatgtgcttaggtaccttcacacggttattgcttgcaccatatggggtagaaaaaa |
17619143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 47 - 333
Target Start/End: Complemental strand, 21855864 - 21855578
Alignment:
| Q |
47 |
catcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaaggattccaa |
146 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||| | |
|
|
| T |
21855864 |
catcaaaaaggaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacagcctgcaatcatgggatccaattcaaggattccga |
21855765 |
T |
|
| Q |
147 |
gcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatgaacatgtg |
246 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
21855764 |
gcaaagaaataggtataaatctctaatctctagatctatctctccttgcaggtaccttgatgttaatgctatggatagactagaaatagttgaacatgtg |
21855665 |
T |
|
| Q |
247 |
attaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggtag |
333 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
21855664 |
attaggctgttgaataaattcacaactctgtgcttaggtaccttcacacggttattgcttgcaccatatggggtagaaaagaggtag |
21855578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 39 - 333
Target Start/End: Complemental strand, 20041169 - 20040875
Alignment:
| Q |
39 |
gtcagtggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaag |
138 |
Q |
| |
|
|||| |||||| ||||| |||||||||| | ||||||||||||| ||| ||||||||||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
20041169 |
gtcaatggcataaaaaaggaaaggtgagaagattgaagcctccgaaagtggtgcaagcaagaagcaatcaacaacccacaatcatgggatccaattcaag |
20041070 |
T |
|
| Q |
139 |
gattccaagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
238 |
Q |
| |
|
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
20041069 |
gattctgagcaaagaaataggtataaatctctaatctctagaactatctctccttgcaggtaccttgatgttaatgctatggatagactagaaatagatg |
20040970 |
T |
|
| Q |
239 |
aacatgtgattaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggtag |
333 |
Q |
| |
|
||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
20040969 |
aacatatgattaggctgttgaataaattcacaaccctgtgcttaggtaccttcacacggttattgcttgcaccatatggggtagaaaagaggtag |
20040875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 27093953 - 27094142
Alignment:
| Q |
39 |
gtcagtggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaag |
138 |
Q |
| |
|
|||| |||||||||||| |||||||||| | ||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
27093953 |
gtcaatggcatcaaaaaagaaaggtgagaaaattgaagcctccggaagtggtgcaagcaagaaacaatcaacaacccgcaatcatgggatccaattcaag |
27094052 |
T |
|
| Q |
139 |
gattccaagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagacta |
228 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
27094053 |
gattccgagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccttgatgttaatgctatggatagacta |
27094142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 65 - 333
Target Start/End: Complemental strand, 45562550 - 45562285
Alignment:
| Q |
65 |
aggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaaggattccaagcaaagaaataggtataa |
164 |
Q |
| |
|
|||| ||||||| ||||||||| |||||||||| || |||||||| | || ||| |||||||| ||||||||||| || |||||| ||||||||||| |
|
|
| T |
45562550 |
aggaaattgaagactccggaagcggtgcaagcagaaaacaatcaacagtccaaaattatgggatcaaattcaaggatcccgagcaaaagaataggtataa |
45562451 |
T |
|
| Q |
165 |
ttctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatgaacatgtgattaggctgttgaatata |
264 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||| |||||| |||||| ||||||| |||||||||| |
|
|
| T |
45562450 |
atctctaatctctagaactatctctccctgcaggtaccctgatgttaatgttatggatagactaggaatagaggaacatatgattagactgttgaata-- |
45562353 |
T |
|
| Q |
265 |
ttcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggtag |
333 |
Q |
| |
|
|||||||||||| ||||||||||||| | |||||| | ||||||||||| | |||| ||| |||||| |
|
|
| T |
45562352 |
-acacaaccttgtgtttaggtaccttcaaagggttatggtttgcaccatatagggtaggaaagaggtag |
45562285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 65 - 315
Target Start/End: Original strand, 25735158 - 25735406
Alignment:
| Q |
65 |
aggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaaggattccaagcaaagaaataggtataa |
164 |
Q |
| |
|
|||| ||||||| | ||||||| |||||||| | || ||||||| | ||| ||||||||||||||||||||| || || |||||| ||||||||||| |
|
|
| T |
25735158 |
aggagattgaaggccccggaagcggtgcaagaagaaaacaatcaatagtccgaaatcatgggatccaattcaagaatcccgagcaaaagaataggtataa |
25735257 |
T |
|
| Q |
165 |
ttctctaatctctagaactatctctccttgcaggtaccctgatg-ttaatgctttggatagactagaaatagatgaacatgtgattaggctgttgaatat |
263 |
Q |
| |
|
|||| ||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||| |||||| |||||| |||||||| ||||||||| |
|
|
| T |
25735258 |
atctcaaatctctagaactatctcttccggcaggtaccctgatgattaatgctttggatagactaggaatagaggaacatatgattaggttgttgaata- |
25735356 |
T |
|
| Q |
264 |
attcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatat |
315 |
Q |
| |
|
||||||||||| ||||||||| |||| | |||||| ||||||||||||| |
|
|
| T |
25735357 |
--acacaaccttgtacttaggtactttcaaagggttatggcttgcaccatat |
25735406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 118 - 257
Target Start/End: Original strand, 25398851 - 25398991
Alignment:
| Q |
118 |
aatcatgggatccaattcaaggattccaagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatg-ttaatgct |
216 |
Q |
| |
|
||||||||||||||||||||| || || |||||| |||| |||||| |||| ||||||||||||||||||| | ||||||||||||||| |||||||| |
|
|
| T |
25398851 |
aatcatgggatccaattcaagaatcccgagcaaaagaataagtataaatctcaaatctctagaactatctcttccggcaggtaccctgatgattaatgct |
25398950 |
T |
|
| Q |
217 |
ttggatagactagaaatagatgaacatgtgattaggctgtt |
257 |
Q |
| |
|
||||||||||||| |||||| |||||| |||||||| |||| |
|
|
| T |
25398951 |
ttggatagactaggaatagaggaacatatgattaggntgtt |
25398991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 11348825 - 11348779
Alignment:
| Q |
264 |
attcacaaccttgtgcttaggtaccttcacacggttattgcttgcac |
310 |
Q |
| |
|
|||||||||| |||||||||||||||||| | |||||| |||||||| |
|
|
| T |
11348825 |
attcacaaccctgtgcttaggtaccttcaaagggttatggcttgcac |
11348779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 310
Target Start/End: Original strand, 22368294 - 22368340
Alignment:
| Q |
264 |
attcacaaccttgtgcttaggtaccttcacacggttattgcttgcac |
310 |
Q |
| |
|
|||||||||| |||||||||||||||||| | |||||| |||||||| |
|
|
| T |
22368294 |
attcacaaccctgtgcttaggtaccttcaaagggttatggcttgcac |
22368340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 239; Significance: 1e-132; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 39 - 333
Target Start/End: Original strand, 17817631 - 17817925
Alignment:
| Q |
39 |
gtcagtggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaag |
138 |
Q |
| |
|
|||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
17817631 |
gtcaatggcatcaaaaaggaaaggtgaggatattgaagcctccggaagaggtgtaagcaagaagcaatcaacagcccgcaatcatgggatccaattcaag |
17817730 |
T |
|
| Q |
139 |
gattccaagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
238 |
Q |
| |
|
|||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
17817731 |
gatttcgagcaaagaaataggtataattttctaatctctagaactatctctccttgcaggtaccctgattttaatgctttggatagactagaaatagatg |
17817830 |
T |
|
| Q |
239 |
aacatgtgattaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggtag |
333 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||| |
|
|
| T |
17817831 |
aacatgtgattaggctgttgaataaattcacaaccctgtgcttaggtaccttcacacggttatggcttgcaccatatggggtagaaaagaggtag |
17817925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 194 - 328
Target Start/End: Original strand, 18852289 - 18852423
Alignment:
| Q |
194 |
gcaggtaccctgatgttaatgctttggatagactagaaatagatgaacatgtgattaggctgttgaatatattcacaaccttgtgcttaggtaccttcac |
293 |
Q |
| |
|
||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
18852289 |
gcaggtaccttgatgttaatgctatggatagactagaaatagatgaacatgtgattaggctgttgaataaattcacaaccctgtgcttaggtaccttcac |
18852388 |
T |
|
| Q |
294 |
acggttattgcttgcaccatatggagtagaaaaaa |
328 |
Q |
| |
|
| |||||| ||||||||||||||| |||||||||| |
|
|
| T |
18852389 |
atggttatggcttgcaccatatggggtagaaaaaa |
18852423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 70 - 315
Target Start/End: Complemental strand, 19589612 - 19589369
Alignment:
| Q |
70 |
attgaagcctccggaagaggtgcaagcaagaagcaatcaacg-gaccgcaatcatgggatccaattcaaggattccaagcaaagaaataggtataattct |
168 |
Q |
| |
|
||||||| ||| ||||| |||| |||||| || |||||||| | | |||||||||||||| ||||||||||| ||||| ||| ||||||||||| ||| |
|
|
| T |
19589612 |
attgaaggctctggaagtggtgtaagcaaaaatcaatcaacaagtctgcaatcatgggatcgaattcaaggatcccaagaaaaagaataggtataaatct |
19589513 |
T |
|
| Q |
169 |
ctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatgaacatgtgattaggctgttgaatatattca |
268 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||||||||| | |||||||||||| |||||| ||||||||||||| | ||||||||| || |
|
|
| T |
19589512 |
ctaatatctagaactatctctccttgtcagtaccctgatgttaatgttatggatagactaggaatagaggaacatgtgattaagttgttgaata---aca |
19589416 |
T |
|
| Q |
269 |
caaccttgtgcttaggtaccttcacacggttattgcttgcaccatat |
315 |
Q |
| |
|
||||| |||||||||||||||||| | |||||| ||||||||||||| |
|
|
| T |
19589415 |
caaccctgtgcttaggtaccttcaaagggttatggcttgcaccatat |
19589369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 47 - 262
Target Start/End: Complemental strand, 23520157 - 23519943
Alignment:
| Q |
47 |
catcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaaggattccaa |
146 |
Q |
| |
|
||||||| | ||||||| |||| ||||||| |||||||| ||||||||||||||||||||||| | | ||||||||| |||| ||||||||||| || | |
|
|
| T |
23520157 |
catcaaagaggaaaggtaaggagattgaaggctccggaaatggtgcaagcaagaagcaatcaacag-cagcaatcatgcgatcgaattcaaggatcccga |
23520059 |
T |
|
| Q |
147 |
gcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatgaacatgtg |
246 |
Q |
| |
|
| |||| ||||||||||| |||||||| ||||||||||||| || || ||||||| |||| ||||||| |||||||||||| |||||| || |||||| |
|
|
| T |
23520058 |
gaaaaggaataggtataaatctctaatgtctagaactatctatcatttttggtaccccgatgctaatgctatggatagactaggaatagaggaccatgtg |
23519959 |
T |
|
| Q |
247 |
attaggctgttgaata |
262 |
Q |
| |
|
||||| |||||||||| |
|
|
| T |
23519958 |
attagactgttgaata |
23519943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 18847501 - 18847627
Alignment:
| Q |
44 |
tggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaaggattc |
143 |
Q |
| |
|
|||||||||| | |||| ||||||| ||||||||||||| ||| ||||||||||||||||||||||| ||| ||| ||||||||||||||||| |||| |
|
|
| T |
18847501 |
tggcatcaaagaggaaaagtgaggagattgaagcctccgaaagtggtgcaagcaagaagcaatcaac-aacccgaataatgggatccaattcaagaattc |
18847599 |
T |
|
| Q |
144 |
caagcaaagaaataggtataattctcta |
171 |
Q |
| |
|
| ||| ||||||||||||||| |||||| |
|
|
| T |
18847600 |
cgagctaagaaataggtataaatctcta |
18847627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 333
Target Start/End: Complemental strand, 23519626 - 23519557
Alignment:
| Q |
264 |
attcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggtag |
333 |
Q |
| |
|
|||||||||| ||||||||| |||||||| | |||||| | ||||||||||||| |||| ||| |||||| |
|
|
| T |
23519626 |
attcacaaccctgtgcttagctaccttcagagggttatggtttgcaccatatggggtaggaaagaggtag |
23519557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 325
Target Start/End: Complemental strand, 18189441 - 18189381
Alignment:
| Q |
265 |
ttcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaa |
325 |
Q |
| |
|
|||||||| |||||||||||||||||| | |||||| ||||||| |||||| ||||||| |
|
|
| T |
18189441 |
ttcacaactctgtgcttaggtaccttcaaagggttatggcttgcataatatggggtagaaa |
18189381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 235; Significance: 1e-130; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 39 - 333
Target Start/End: Original strand, 23513182 - 23513476
Alignment:
| Q |
39 |
gtcagtggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaag |
138 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||| |
|
|
| T |
23513182 |
gtcaatggcatcaaaaacgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacagcccgcaattatgggatccaattcaag |
23513281 |
T |
|
| Q |
139 |
gattccaagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
238 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |
|
|
| T |
23513282 |
gattccgagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtacccagatgttaatgctttggatagactagaaatagacg |
23513381 |
T |
|
| Q |
239 |
aacatgtgattaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggtag |
333 |
Q |
| |
|
| ||| |||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
23513382 |
agcatttgattaggctgttgaataaattcacaaccctgtgcttaggtaccttcacatggttattgcttgcaccatatggggtagaaaagaggtag |
23513476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 49 - 333
Target Start/End: Complemental strand, 10450189 - 10449905
Alignment:
| Q |
49 |
tcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaaggattccaagc |
148 |
Q |
| |
|
||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||| |
|
|
| T |
10450189 |
tcaaaaaggaaaggtgaggatattgaagcctctggaagaggtgcaagcaagaagcaatcaacagcccgcaatcatgggatccaattcaatgattccgagc |
10450090 |
T |
|
| Q |
149 |
aaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatgaacatgtgat |
248 |
Q |
| |
|
||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10450089 |
aaagaaataggtataattctctaatctctagtattatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatgaacatgtgat |
10449990 |
T |
|
| Q |
249 |
taggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggtag |
333 |
Q |
| |
|
|||||||||||||| |||||||| | | ||||| ||||||||||||||||||| ||||||||||||||| |||||||| |||||| |
|
|
| T |
10449989 |
taggctgttgaataaattcacaatcctttgctttggtaccttcacacggttatggcttgcaccatatggggtagaaaagaggtag |
10449905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 39 - 333
Target Start/End: Original strand, 9581025 - 9581318
Alignment:
| Q |
39 |
gtcagtggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaag |
138 |
Q |
| |
|
|||| |||||||||||| |||||||||| | |||||||||||| ||| ||||||||||||||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
9581025 |
gtcaatggcatcaaaaaggaaaggtgagaagattgaagcctccaaaagtggtgcaagcaagaagcaatcaacaacccg-aatcatgggatccaattcaag |
9581123 |
T |
|
| Q |
139 |
gattccaagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
238 |
Q |
| |
|
|||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
9581124 |
gattccgagcaaagcaataggtataaatctctaatctctagaactatctctccttgcaggtaccttgatgttaatgctatggatagactagaaatagatg |
9581223 |
T |
|
| Q |
239 |
aacatgtgattaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggtag |
333 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
9581224 |
aacatgtgattaggctgttgaataaattcccaaccctgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaagaggtag |
9581318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 39 - 333
Target Start/End: Original strand, 9728877 - 9729170
Alignment:
| Q |
39 |
gtcagtggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaag |
138 |
Q |
| |
|
|||| |||||||||||| |||||||||| | |||||||||||| ||| ||||||||||||||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
9728877 |
gtcaatggcatcaaaaaggaaaggtgagaagattgaagcctccaaaagtggtgcaagcaagaagcaatcaacaacccg-aatcatgggatccaattcaag |
9728975 |
T |
|
| Q |
139 |
gattccaagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
238 |
Q |
| |
|
|||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
9728976 |
gattccgagcaaagcaataggtataaatctctaatctctagaactatctctccttgcaggtaccttgatgttaatgctatggatagactagaaatagatg |
9729075 |
T |
|
| Q |
239 |
aacatgtgattaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggtag |
333 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
9729076 |
aacatgtgattaggctgttgaataaattcccaaccctgtgcttaggtaccttcacacggttattgctggcaccatatggagtagaaaagaggtag |
9729170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 52 - 333
Target Start/End: Original strand, 13740545 - 13740827
Alignment:
| Q |
52 |
aaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaaggattccaagcaaa |
151 |
Q |
| |
|
|||| ||||||| | || ||||||||||||||||| ||||||||||||| | ||||||| ||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
13740545 |
aaaaggaaaggtaatgagattgaagcctccggaagtggtgcaagcaagatgtaatcaacaacccgcaatcatgggatccaattcaaggattccgagcaaa |
13740644 |
T |
|
| Q |
152 |
gaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatgaacatgtgattag |
251 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||| |||||||||||||||| |
|
|
| T |
13740645 |
gaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctatgaatagactaggaatatatgaacatgtgattag |
13740744 |
T |
|
| Q |
252 |
gctgttgaatata-ttcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggtag |
333 |
Q |
| |
|
||||||||||| | ||||||||| |||||||||||||||||| | |||||| ||||||||||||||| |||||||| |||||| |
|
|
| T |
13740745 |
gctgttgaatagacttcacaaccctgtgcttaggtaccttcaaagggttatggcttgcaccatatggggtagaaaagaggtag |
13740827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 39 - 322
Target Start/End: Original strand, 4310841 - 4311124
Alignment:
| Q |
39 |
gtcagtggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaag |
138 |
Q |
| |
|
|||| |||||||||||| ||||||| |||| |||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
4310841 |
gtcaatggcatcaaaaaggaaaggtaaggagattgaagcctccagaagtggtgcaagcaagaagcaatcaacaacccgcaatcatgggatccaat-caag |
4310939 |
T |
|
| Q |
139 |
gattccaagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
238 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | || ||||||||| |||||||| |
|
|
| T |
4310940 |
gattccgagcaaagaaataggtataattctctaatctctagaactatctttccttgcaggtaccctgatgttaatgttatgaatagactaggaatagatg |
4311039 |
T |
|
| Q |
239 |
aacatgtgattaggctgttgaata-tattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtag |
322 |
Q |
| |
|
|||||||||||||||| ||||||| |||| |||| ||| | |||||||||||| | ||||| ||||||||||||||| |||| |
|
|
| T |
4311040 |
aacatgtgattaggctattgaataggcttcaaaaccatgttcgtaggtaccttcaaagagttatcgcttgcaccatatggggtag |
4311124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 39 - 315
Target Start/End: Complemental strand, 8784187 - 8783914
Alignment:
| Q |
39 |
gtcagtggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaag |
138 |
Q |
| |
|
|||| |||||||||| | |||||| |||| ||| || ||| ||||| ||||||||||| || |||||||| | |||||||||||||||| |||||||| |
|
|
| T |
8784187 |
gtcaatggcatcaaagaggaaaggaaaggaaattctaggctctggaagtggtgcaagcaaaaatcaatcaacagtccgcaatcatgggatcgaattcaag |
8784088 |
T |
|
| Q |
139 |
gattccaagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
238 |
Q |
| |
|
||| || |||||| ||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||| | ||||| ||||| | |
|
|
| T |
8784087 |
gatcccgagcaaatgaatgggtataaatctctaatctctagaactatctctccttgtcagtaccctgatgttaatgaaatggacaaactaggaatagtgg |
8783988 |
T |
|
| Q |
239 |
aacatgtgattaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatat |
315 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||| |||||||||||||||||| | |||||| ||||||||||||| |
|
|
| T |
8783987 |
aacatgtgattaggctgttggata---acacaaccctgtgcttaggtaccttcaaagggttatggcttgcaccatat |
8783914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 247
Target Start/End: Complemental strand, 4462668 - 4462460
Alignment:
| Q |
39 |
gtcagtggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaag |
138 |
Q |
| |
|
|||| |||||||||| | |||||| |||| |||||| |||| ||||| |||||| | | |||| || |||| | ||| || ||||| ||| | || || |
|
|
| T |
4462668 |
gtcaatggcatcaaagaggaaaggcaaggagattgaaacctcaggaagtggtgcagggaggaagaaagcaacagtccgaaaccatggcatcaattttaaa |
4462569 |
T |
|
| Q |
139 |
gattccaagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
238 |
Q |
| |
|
||| |||||||| ||||||||||| ||||| |||||||||||||| ||| |||| ||||| | ||||||||| | |||||||| ||| ||||| | |
|
|
| T |
4462568 |
gatgacaagcaaaagaataggtataaatctcttatctctagaactatttctgcttgtcagtaccttaatgttaatgttatggatagattaggtatagagg |
4462469 |
T |
|
| Q |
239 |
aacatgtga |
247 |
Q |
| |
|
| ||||||| |
|
|
| T |
4462468 |
accatgtga |
4462460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 124
Target Start/End: Original strand, 13633865 - 13633937
Alignment:
| Q |
52 |
aaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatg |
124 |
Q |
| |
|
|||| ||||||| | || ||||||||||||||||| ||||||||||||| | ||||||| ||||||||||| |
|
|
| T |
13633865 |
aaaaggaaaggtaatgagattgaagcctccggaagtggtgcaagcaagatgtaatcaacaacccgcaatcatg |
13633937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 310
Target Start/End: Original strand, 823964 - 824010
Alignment:
| Q |
264 |
attcacaaccttgtgcttaggtaccttcacacggttattgcttgcac |
310 |
Q |
| |
|
|||||||||| |||||||||||||||||| | |||||| |||||||| |
|
|
| T |
823964 |
attcacaaccctgtgcttaggtaccttcaaagggttatggcttgcac |
824010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 310
Target Start/End: Original strand, 15064098 - 15064144
Alignment:
| Q |
264 |
attcacaaccttgtgcttaggtaccttcacacggttattgcttgcac |
310 |
Q |
| |
|
|||||||||| |||||||||||||||||| | |||||| |||||||| |
|
|
| T |
15064098 |
attcacaaccctgtgcttaggtaccttcaaagggttatggcttgcac |
15064144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 15921868 - 15921822
Alignment:
| Q |
264 |
attcacaaccttgtgcttaggtaccttcacacggttattgcttgcac |
310 |
Q |
| |
|
|||||||||| |||||||||||||||||| | |||||| |||||||| |
|
|
| T |
15921868 |
attcacaaccctgtgcttaggtaccttcaaagggttatggcttgcac |
15921822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 313
Target Start/End: Original strand, 20106610 - 20106659
Alignment:
| Q |
264 |
attcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccat |
313 |
Q |
| |
|
|||||||| | |||||||||||||||||| | |||||| ||||||||||| |
|
|
| T |
20106610 |
attcacaaacatgtgcttaggtaccttcagagggttatggcttgcaccat |
20106659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 195; Significance: 1e-106; HSPs: 2)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 39 - 328
Target Start/End: Complemental strand, 9428 - 9145
Alignment:
| Q |
39 |
gtcagtggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaag |
138 |
Q |
| |
|
|||| ||||| |||||| |||||||||| | ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
9428 |
gtcaatggcaacaaaaaggaaaggtgagaagattgaagcctccggaagtggtgcaagcaagaagcaatcaacaacccgcaatcatgggatccaattcaag |
9329 |
T |
|
| Q |
139 |
gattccaagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
238 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||| |||||| |
|
|
| T |
9328 |
gattccgagcaaagaaataggtataaatctctaatctctagaactatctctctttgcaggtaccttgatgttaatgctatggatagac------tagatg |
9235 |
T |
|
| Q |
239 |
aacatgtgattaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaa |
328 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
9234 |
aacatgtgattaggatgttgaataaattcacaaccctgtgcttaggtaccttcacacggttattgcttgcaccatatggggtagaaaaaa |
9145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 39 - 328
Target Start/End: Complemental strand, 13536 - 13254
Alignment:
| Q |
39 |
gtcagtggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaag |
138 |
Q |
| |
|
|||| |||||||||||| |||||||||| | ||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
13536 |
gtcaatggcatcaaaaaggaaaggtgagaagattgaagcctccggaagtggtgcaagcaagaagcaatcaaca-acctgaatcatgggatccaattcaag |
13438 |
T |
|
| Q |
139 |
gattccaagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatg |
238 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||| |||||| |
|
|
| T |
13437 |
gattccgagcaaagaaataggtataaatctctaatctctagaactatctctctttgcaggtaccttgatgttaatgctatggatagac------tagatg |
13344 |
T |
|
| Q |
239 |
aacatgtgattaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaa |
328 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
13343 |
aacatgtgattaggatgttgaataaattcacaaccctgtgcttaggtaccttcacacggttatggcttgcaccatatggggtagaaaaaa |
13254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0220 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: scaffold0220
Description:
Target: scaffold0220; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 38 - 328
Target Start/End: Complemental strand, 12413 - 12124
Alignment:
| Q |
38 |
agtcagtggcatcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaa |
137 |
Q |
| |
|
||||| |||||||||||| |||||||||| | ||||||||||| ||| ||||||||||||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
12413 |
agtcaatggcatcaaaaaggaaaggtgagaagattgaagcctctaaaagtggtgcaagcaagaagcaatcaacaacccg-aatcatgggatccaattcaa |
12315 |
T |
|
| Q |
138 |
ggattccaagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagat |
237 |
Q |
| |
|
||||||| ||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |
|
|
| T |
12314 |
ggattccgagcaaagtaataggtataaatctctaatctctataactatctctccttgcaggtaccttgatgttaatgctatggatagactagaaatagat |
12215 |
T |
|
| Q |
238 |
gaacatgtgattaggctgttgaatatattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaa |
328 |
Q |
| |
|
||| ||||||||||||| ||||||| | |||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
12214 |
gaagatgtgattaggctattgaataaactcacaaccctgtgcttaggtaccttcacacggttatggcttgcaccatatggggtagaaaaaa |
12124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 179; Significance: 1e-96; HSPs: 2)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 47 - 332
Target Start/End: Original strand, 16491 - 16776
Alignment:
| Q |
47 |
catcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaaggattccaa |
146 |
Q |
| |
|
||||||||| |||||||||| | ||||||||||||| ||| || |||||||||||||||||||| ||| ||||||||||||||||||||||||||| | |
|
|
| T |
16491 |
catcaaaaaagaaaggtgagaagattgaagcctccgaaagtggcgcaagcaagaagcaatcaaca-acccaaatcatgggatccaattcaaggattccga |
16589 |
T |
|
| Q |
147 |
gcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatgaacatgtg |
246 |
Q |
| |
|
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
16590 |
gcaaagaaatatgtataattctctaatccctagaactatctctccttgcaggtaccctgatgttaatgctttggatatactaggaatagatgaacatgtg |
16689 |
T |
|
| Q |
247 |
attaggctgttgaatata-ttcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggta |
332 |
Q |
| |
|
|||||||| ||||||| | ||||||||| |||||||||||||||||| | |||||| ||||||||||||||| |||| ||| ||||| |
|
|
| T |
16690 |
attaggctattgaatagacttcacaaccctgtgcttaggtaccttcaaagggttatggcttgcaccatatggggtagcaaagaggta |
16776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 310
Target Start/End: Original strand, 131964 - 132010
Alignment:
| Q |
264 |
attcacaaccttgtgcttaggtaccttcacacggttattgcttgcac |
310 |
Q |
| |
|
|||||||||| |||||||||||||||||| | |||||| |||||||| |
|
|
| T |
131964 |
attcacaaccctgtgcttaggtaccttcaaagggttatggcttgcac |
132010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 168; Significance: 5e-90; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 47 - 333
Target Start/End: Complemental strand, 22627120 - 22626833
Alignment:
| Q |
47 |
catcaaaaatgaaaggtgaggatattgaagcctccggaagaggtgcaagcaagaagcaatcaacggaccgcaatcatgggatccaattcaaggattccaa |
146 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||| | |
|
|
| T |
22627120 |
catcaaaaatgaaaggtaaggagattgaagcctccggaagtggttcaagcaagaagcaatcaacaacccgcaatcatgggatccaattcaaggattctga |
22627021 |
T |
|
| Q |
147 |
gcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactagaaatagatgaacatgtg |
246 |
Q |
| |
|
|||| |||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||| || ||||||||| |||||||||||||||| |
|
|
| T |
22627020 |
gcaatgaaataggtataattctctaatatctagaactacctctccttgcaggtaccgtgatgttaatgctatgaatagactaggaatagatgaacatgtg |
22626921 |
T |
|
| Q |
247 |
attaggctgttgaatata-ttcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggtag |
333 |
Q |
| |
|
|||||| ||||||||| | |||| ||||||||||||||||||||| | | ||| | |||||||||||||| |||||||| |||||| |
|
|
| T |
22626920 |
attaggttgttgaatagacttcataaccttgtgcttaggtaccttgaaagagttttgacttgcaccatatggggtagaaaagaggtag |
22626833 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 19877554 - 19877496
Alignment:
| Q |
264 |
attcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtag |
322 |
Q |
| |
|
|||||||||| |||||||||||||||||| | |||||| ||||||||||||||| |||| |
|
|
| T |
19877554 |
attcacaaccctgtgcttaggtaccttcaaagggttatggcttgcaccatatggggtag |
19877496 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 8651357 - 8651417
Alignment:
| Q |
262 |
atattcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtag |
322 |
Q |
| |
|
|||||||||||| |||||||||||||||| | | |||||| ||||||||||| ||| |||| |
|
|
| T |
8651357 |
atattcacaaccctgtgcttaggtaccttaaaagggttatggcttgcaccatttggggtag |
8651417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 95 - 200
Target Start/End: Original strand, 44998504 - 44998609
Alignment:
| Q |
95 |
gcaagaagcaatcaacggaccgcaatcatgggatccaattcaaggattccaagcaaagaaataggtataattctctaatctctagaactatctctccttg |
194 |
Q |
| |
|
|||||||||||||||| | |||||||||||||||| || |||||||| || ||||||| ||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
44998504 |
gcaagaagcaatcaacagtccgcaatcatgggatcgaactcaaggatcccgagcaaaggaataggtataaatctctaatctctagaactatctctccttg |
44998603 |
T |
|
| Q |
195 |
caggta |
200 |
Q |
| |
|
|||||| |
|
|
| T |
44998604 |
caggta |
44998609 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0290 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0290
Description:
Target: scaffold0290; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 20514 - 20456
Alignment:
| Q |
264 |
attcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtag |
322 |
Q |
| |
|
|||||||||| |||||||||||||||||| | |||||| ||||||||||| ||| |||| |
|
|
| T |
20514 |
attcacaaccctgtgcttaggtaccttcaaagggttatggcttgcaccatttggggtag |
20456 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0402 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0402
Description:
Target: scaffold0402; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 6220 - 6278
Alignment:
| Q |
264 |
attcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtag |
322 |
Q |
| |
|
||||||||||||||||||||||||||||| | || || ||||||||||| ||| |||| |
|
|
| T |
6220 |
attcacaaccttgtgcttaggtaccttcaaagagtgatggcttgcaccatttggggtag |
6278 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0059 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0059
Description:
Target: scaffold0059; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 10495 - 10553
Alignment:
| Q |
264 |
attcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtag |
322 |
Q |
| |
|
|||||||||| ||| |||||||||||||| | |||||| ||||||||||| ||| |||| |
|
|
| T |
10495 |
attcacaaccatgtacttaggtaccttcaaagggttatggcttgcaccatttggggtag |
10553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0059; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 18496 - 18554
Alignment:
| Q |
264 |
attcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtag |
322 |
Q |
| |
|
|||||||||| ||| |||||||||||||| | |||||| ||||||||||| ||| |||| |
|
|
| T |
18496 |
attcacaaccatgtacttaggtaccttcaaagggttatggcttgcaccatttggggtag |
18554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 234903 - 234845
Alignment:
| Q |
264 |
attcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtag |
322 |
Q |
| |
|
|||||||||| ||| |||||||||||||| | |||||| ||||||||||| ||| |||| |
|
|
| T |
234903 |
attcacaaccatgtacttaggtaccttcaaagggttatggcttgcaccatttggggtag |
234845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0346 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0346
Description:
Target: scaffold0346; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 313
Target Start/End: Complemental strand, 5471 - 5422
Alignment:
| Q |
264 |
attcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccat |
313 |
Q |
| |
|
|||||||||| ||| |||||||||||||| | |||||| ||||||||||| |
|
|
| T |
5471 |
attcacaaccctgtacttaggtaccttcaaagggttatggcttgcaccat |
5422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0222 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0222
Description:
Target: scaffold0222; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 18138 - 18223
Alignment:
| Q |
144 |
caagcaaagaaataggtataattctctaatctctagaactatctctccttgcaggtaccctgatgttaatgctttggatagactag |
229 |
Q |
| |
|
||||||||| | || |||||| ||||| ||||||| | |||| | | |||| || |||||||||| ||||||| |||||||||||| |
|
|
| T |
18138 |
caagcaaaggagtatgtataaatctcttatctctaaatctatttatgcttgtagataccctgatgataatgctatggatagactag |
18223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0216 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0216
Description:
Target: scaffold0216; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 333
Target Start/End: Original strand, 9771 - 9840
Alignment:
| Q |
264 |
attcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccatatggagtagaaaaaaggtag |
333 |
Q |
| |
|
||||||||||||||||||| ||||||||| | || ||| |||| ||||| ||| |||||||| |||||| |
|
|
| T |
9771 |
attcacaaccttgtgcttaagtaccttcaaagggctatgacttgtaccatttggggtagaaaagaggtag |
9840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0156 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0156
Description:
Target: scaffold0156; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 313
Target Start/End: Complemental strand, 8373 - 8324
Alignment:
| Q |
264 |
attcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccat |
313 |
Q |
| |
|
||||||||| |||||||||||||||||| | |||||| ||||||||||| |
|
|
| T |
8373 |
attcacaactctgtgcttaggtaccttcaaagggttatggcttgcaccat |
8324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 313
Target Start/End: Original strand, 23877 - 23926
Alignment:
| Q |
264 |
attcacaaccttgtgcttaggtaccttcacacggttattgcttgcaccat |
313 |
Q |
| |
|
|||||||||| || |||||||||||||| |||||||| ||||||||||| |
|
|
| T |
23877 |
attcacaaccccgtacttaggtaccttcaaacggttatggcttgcaccat |
23926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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