View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21672_high_50 (Length: 301)
Name: NF21672_high_50
Description: NF21672
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21672_high_50 |
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Alignment Details
Target: chr3 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 10449870 - 10450126
Alignment:
| Q |
1 |
ctcaaagactaggaagtgttgacctattaagaaataggaatgcataatggttgagttttcagagatttgagaaaaacaattgaaaatatgcactgcatta |
100 |
Q |
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| T |
10449870 |
ctcaaagactaggaagtgttgacctattaggaaataggaatgcataatggttgagttttcagagatttgagaaaaacaattgaaaatatgtactgcatta |
10449969 |
T |
|
| Q |
101 |
caaacaaacaaaaaatcaacttaaggcgagaattcgccttttcacatgtttggtttccccttcgaaaacagttgtccctttaaccttgctacctctatta |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10449970 |
caaacaaacaaaaaatcaacttaaggcgagaattcgccttttcacatgtttggtttccccttcgaaaacagttgtccctttaaccttgctacctctattg |
10450069 |
T |
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| Q |
201 |
aaatcccaaaaccaaaacactcttggtatattctatactaattgttaagattctgac |
257 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
10450070 |
aaatcccaaaaccaaaacactcttggtagattctatactaattgttaagattctgac |
10450126 |
T |
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