View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21673_high_6 (Length: 335)

Name: NF21673_high_6
Description: NF21673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21673_high_6
NF21673_high_6
[»] scaffold0061 (2 HSPs)
scaffold0061 (266-335)||(68514-68583)
scaffold0061 (9-72)||(68328-68392)
[»] chr8 (27 HSPs)
chr8 (266-335)||(21974142-21974211)
chr8 (266-335)||(21978252-21978321)
chr8 (266-335)||(43250253-43250322)
chr8 (268-335)||(14399053-14399120)
chr8 (268-335)||(21409952-21410019)
chr8 (268-335)||(21804444-21804511)
chr8 (9-81)||(22110936-22111009)
chr8 (9-81)||(43250696-43250769)
chr8 (9-81)||(21973689-21973762)
chr8 (9-70)||(21977780-21977842)
chr8 (265-335)||(23427877-23427945)
chr8 (265-335)||(23913316-23913384)
chr8 (265-335)||(44385793-44385861)
chr8 (264-335)||(21386210-21386279)
chr8 (7-81)||(18863811-18863889)
chr8 (7-81)||(30941271-30941349)
chr8 (266-308)||(21829430-21829472)
chr8 (9-64)||(21829139-21829195)
chr8 (28-74)||(15924297-15924344)
chr8 (266-308)||(22110668-22110710)
chr8 (268-308)||(18864076-18864116)
chr8 (268-308)||(30941536-30941576)
chr8 (35-75)||(20983485-20983525)
chr8 (18-81)||(38550618-38550681)
chr8 (48-81)||(21977839-21977872)
chr8 (40-81)||(38550705-38550746)
chr8 (35-75)||(20983551-20983591)
[»] chr7 (64 HSPs)
chr7 (266-335)||(31776-31845)
chr7 (266-335)||(12706081-12706150)
chr7 (266-335)||(12713591-12713660)
chr7 (266-335)||(12717338-12717407)
chr7 (266-335)||(12722249-12722318)
chr7 (266-335)||(16908468-16908537)
chr7 (266-335)||(18278045-18278114)
chr7 (266-335)||(18282009-18282078)
chr7 (268-335)||(2833442-2833509)
chr7 (268-335)||(15083277-15083344)
chr7 (9-81)||(31994-32067)
chr7 (9-81)||(12713809-12713882)
chr7 (9-81)||(12717633-12717706)
chr7 (9-81)||(12722544-12722617)
chr7 (268-335)||(39721247-39721314)
chr7 (265-335)||(25928330-25928399)
chr7 (268-335)||(7520176-7520243)
chr7 (265-335)||(20486793-20486861)
chr7 (268-334)||(2531293-2531359)
chr7 (265-335)||(10607280-10607348)
chr7 (28-81)||(2833200-2833253)
chr7 (28-81)||(18278264-18278317)
chr7 (28-81)||(18282227-18282280)
chr7 (264-335)||(9752466-9752535)
chr7 (264-335)||(18301402-18301471)
chr7 (265-335)||(16582472-16582540)
chr7 (9-65)||(18278344-18278401)
chr7 (7-81)||(45171207-45171285)
chr7 (266-308)||(72341-72383)
chr7 (266-308)||(76450-76492)
chr7 (28-81)||(2531050-2531104)
chr7 (9-66)||(18282306-18282364)
chr7 (289-335)||(26291208-26291254)
chr7 (28-81)||(26291374-26291428)
chr7 (264-335)||(1859979-1860049)
chr7 (264-335)||(13919370-13919440)
chr7 (9-64)||(71970-72026)
chr7 (9-64)||(76079-76135)
chr7 (9-72)||(12705815-12705879)
chr7 (29-66)||(18282274-18282311)
chr7 (295-335)||(39268301-39268341)
chr7 (268-308)||(45171472-45171512)
chr7 (298-335)||(11660333-11660370)
chr7 (298-335)||(13891681-13891718)
chr7 (29-66)||(18278311-18278348)
chr7 (35-75)||(6170760-6170800)
chr7 (22-81)||(15112352-15112412)
chr7 (22-81)||(15115924-15115984)
chr7 (37-73)||(18424601-18424637)
chr7 (37-73)||(18424714-18424750)
chr7 (33-81)||(25928194-25928242)
chr7 (35-81)||(6170826-6170872)
chr7 (35-81)||(9390377-9390423)
chr7 (28-81)||(16582665-16582719)
chr7 (33-66)||(2833173-2833206)
chr7 (40-81)||(8467864-8467905)
chr7 (40-81)||(10502048-10502089)
chr7 (36-73)||(10607142-10607179)
chr7 (302-335)||(13892064-13892097)
chr7 (40-81)||(14270754-14270795)
chr7 (40-81)||(17231859-17231900)
chr7 (40-81)||(17231924-17231965)
chr7 (40-81)||(17231989-17232030)
chr7 (40-81)||(17232054-17232095)
[»] chr6 (41 HSPs)
chr6 (266-335)||(8242463-8242532)
chr6 (266-335)||(11565452-11565521)
chr6 (266-335)||(12620292-12620361)
chr6 (266-335)||(22861806-22861875)
chr6 (266-335)||(23988354-23988423)
chr6 (265-335)||(11716898-11716968)
chr6 (9-81)||(8242759-8242832)
chr6 (9-81)||(11565747-11565820)
chr6 (9-81)||(12619990-12620063)
chr6 (9-81)||(23988845-23988918)
chr6 (10-81)||(22948002-22948074)
chr6 (10-81)||(22951958-22952030)
chr6 (10-81)||(23870446-23870518)
chr6 (10-81)||(23874402-23874474)
chr6 (268-335)||(27555590-27555657)
chr6 (265-335)||(2076337-2076405)
chr6 (268-335)||(22075347-22075418)
chr6 (264-335)||(18918539-18918608)
chr6 (7-81)||(19869481-19869559)
chr6 (7-81)||(23393935-23394013)
chr6 (7-81)||(23413843-23413921)
chr6 (28-81)||(1643552-1643606)
chr6 (7-72)||(14471234-14471300)
chr6 (266-308)||(22947734-22947776)
chr6 (266-308)||(22951690-22951732)
chr6 (289-335)||(23400729-23400775)
chr6 (266-308)||(23870178-23870220)
chr6 (266-308)||(23874134-23874176)
chr6 (33-81)||(22075110-22075158)
chr6 (9-64)||(16759139-16759195)
chr6 (264-334)||(14470933-14471001)
chr6 (264-317)||(1643321-1643372)
chr6 (266-308)||(16758782-16758824)
chr6 (28-81)||(18918416-18918469)
chr6 (268-308)||(19869254-19869294)
chr6 (268-308)||(23393708-23393748)
chr6 (268-308)||(23413616-23413656)
chr6 (289-335)||(18953465-18953511)
chr6 (33-75)||(22075077-22075119)
chr6 (37-73)||(16623154-16623190)
chr6 (53-81)||(18953242-18953270)
[»] chr5 (31 HSPs)
chr5 (266-335)||(19474131-19474200)
chr5 (266-335)||(20294565-20294634)
chr5 (268-335)||(18354848-18354915)
chr5 (7-81)||(19473830-19473905)
chr5 (9-81)||(20294786-20294859)
chr5 (275-335)||(24768530-24768590)
chr5 (28-81)||(18355055-18355108)
chr5 (264-335)||(15238076-15238145)
chr5 (264-335)||(20912211-20912280)
chr5 (265-335)||(22108409-22108477)
chr5 (7-72)||(11226427-11226493)
chr5 (28-81)||(24768237-24768290)
chr5 (264-333)||(40727358-40727425)
chr5 (7-81)||(11219849-11219927)
chr5 (7-81)||(11224435-11224513)
chr5 (7-81)||(11230247-11230325)
chr5 (7-61)||(18355179-18355234)
chr5 (265-335)||(22120551-22120619)
chr5 (9-61)||(40727069-40727122)
chr5 (13-81)||(11228257-11228329)
chr5 (268-308)||(11219622-11219662)
chr5 (268-308)||(11224208-11224248)
chr5 (268-308)||(11226224-11226264)
chr5 (268-308)||(11228030-11228070)
chr5 (268-308)||(11230020-11230060)
chr5 (41-81)||(20912104-20912144)
chr5 (33-73)||(22108196-22108236)
chr5 (35-81)||(5889817-5889863)
chr5 (28-73)||(22120335-22120381)
chr5 (35-67)||(5889886-5889918)
chr5 (36-80)||(20912132-20912176)
[»] chr4 (39 HSPs)
chr4 (266-335)||(9555120-9555189)
chr4 (266-335)||(14758950-14759019)
chr4 (266-335)||(14955718-14955787)
chr4 (266-335)||(17807105-17807174)
chr4 (266-335)||(25688493-25688562)
chr4 (266-335)||(4562732-4562801)
chr4 (266-335)||(5758414-5758483)
chr4 (266-335)||(33740887-33740956)
chr4 (268-335)||(20158408-20158475)
chr4 (9-81)||(4562433-4562506)
chr4 (9-81)||(9555415-9555488)
chr4 (9-81)||(14758574-14758647)
chr4 (9-81)||(14955339-14955412)
chr4 (9-81)||(33741185-33741258)
chr4 (10-81)||(25688788-25688860)
chr4 (268-335)||(20161084-20161151)
chr4 (268-335)||(20163859-20163926)
chr4 (9-81)||(5757958-5758031)
chr4 (264-335)||(23996925-23996994)
chr4 (268-335)||(10711876-10711943)
chr4 (268-335)||(10925646-10925713)
chr4 (265-335)||(12422994-12423062)
chr4 (266-335)||(12486322-12486388)
chr4 (265-335)||(17052405-17052473)
chr4 (264-335)||(631706-631775)
chr4 (264-335)||(22634885-22634954)
chr4 (264-335)||(27532803-27532872)
chr4 (7-81)||(12486537-12486615)
chr4 (28-81)||(27532942-27532995)
chr4 (295-335)||(13813820-13813860)
chr4 (295-335)||(13818308-13818348)
chr4 (7-81)||(631561-631636)
chr4 (35-81)||(15189737-15189783)
chr4 (35-81)||(15189770-15189816)
chr4 (298-335)||(24048375-24048412)
chr4 (37-73)||(15223912-15223948)
chr4 (35-80)||(12423189-12423234)
chr4 (40-81)||(15481998-15482039)
chr4 (40-81)||(19857007-19857048)
[»] chr3 (66 HSPs)
chr3 (266-335)||(7108289-7108358)
chr3 (266-335)||(7112224-7112293)
chr3 (266-335)||(11068664-11068733)
chr3 (266-335)||(11167052-11167121)
chr3 (266-335)||(22320180-22320249)
chr3 (266-335)||(22335235-22335304)
chr3 (266-335)||(55021427-55021496)
chr3 (266-335)||(14497998-14498067)
chr3 (266-335)||(15616228-15616297)
chr3 (266-335)||(28948512-28948581)
chr3 (268-335)||(5219898-5219965)
chr3 (7-81)||(11069036-11069111)
chr3 (268-335)||(11853757-11853824)
chr3 (268-335)||(37440641-37440708)
chr3 (9-81)||(7108584-7108657)
chr3 (9-81)||(7112519-7112592)
chr3 (9-81)||(14498293-14498366)
chr3 (9-81)||(15616523-15616596)
chr3 (9-81)||(22320552-22320625)
chr3 (9-81)||(22335607-22335680)
chr3 (9-81)||(28948730-28948803)
chr3 (9-81)||(30064735-30064808)
chr3 (9-81)||(55021873-55021946)
chr3 (268-335)||(11301626-11301693)
chr3 (268-335)||(14664476-14664543)
chr3 (268-335)||(14667640-14667707)
chr3 (9-81)||(11166676-11166749)
chr3 (265-335)||(16795554-16795622)
chr3 (7-81)||(14067672-14067747)
chr3 (267-335)||(12853325-12853391)
chr3 (33-81)||(11301389-11301437)
chr3 (264-335)||(4590119-4590188)
chr3 (264-331)||(14068021-14068086)
chr3 (33-81)||(14664735-14664783)
chr3 (33-81)||(14667899-14667947)
chr3 (7-81)||(15963791-15963869)
chr3 (7-81)||(15967715-15967793)
chr3 (7-81)||(15971639-15971717)
chr3 (266-308)||(4112607-4112649)
chr3 (289-335)||(18933337-18933383)
chr3 (289-335)||(30064436-30064482)
chr3 (267-308)||(4108759-4108800)
chr3 (265-335)||(14670077-14670142)
chr3 (264-335)||(15463929-15463999)
chr3 (9-64)||(4108387-4108443)
chr3 (9-64)||(4112239-4112295)
chr3 (264-335)||(17318468-17318537)
chr3 (37-81)||(4589893-4589936)
chr3 (268-308)||(15963564-15963604)
chr3 (268-308)||(15967488-15967528)
chr3 (268-308)||(15971412-15971452)
chr3 (33-81)||(14067732-14067777)
chr3 (35-81)||(18440583-18440629)
chr3 (35-81)||(19485657-19485703)
chr3 (35-81)||(49390328-49390374)
chr3 (292-335)||(12337307-12337348)
chr3 (37-73)||(16751580-16751616)
chr3 (37-73)||(19774548-19774584)
chr3 (301-335)||(10834935-10834969)
chr3 (265-335)||(14681601-14681664)
chr3 (35-81)||(18440505-18440551)
chr3 (35-81)||(19485579-19485625)
chr3 (298-335)||(8928858-8928895)
chr3 (298-335)||(13435869-13435906)
chr3 (264-311)||(8490350-8490395)
chr3 (53-81)||(27410959-27410987)
[»] chr2 (22 HSPs)
chr2 (266-335)||(24630006-24630075)
chr2 (266-335)||(24645202-24645271)
chr2 (266-335)||(24647978-24648047)
chr2 (266-335)||(27600422-27600491)
chr2 (266-335)||(30346616-30346685)
chr2 (266-335)||(10103255-10103324)
chr2 (266-335)||(12902565-12902634)
chr2 (266-335)||(27380952-27381021)
chr2 (266-335)||(27384922-27384991)
chr2 (9-81)||(10102956-10103029)
chr2 (9-81)||(24629627-24629700)
chr2 (9-81)||(27600717-27600790)
chr2 (9-81)||(30346163-30346236)
chr2 (268-334)||(31343969-31344035)
chr2 (9-81)||(27384546-27384619)
chr2 (9-79)||(27380500-27380571)
chr2 (265-333)||(9784047-9784113)
chr2 (28-81)||(31344221-31344274)
chr2 (7-81)||(41532149-41532227)
chr2 (7-81)||(1282318-1282396)
chr2 (9-72)||(24648249-24648313)
chr2 (268-308)||(41532414-41532454)
[»] chr1 (31 HSPs)
chr1 (266-335)||(1009313-1009382)
chr1 (266-335)||(1926754-1926823)
chr1 (266-335)||(16376774-16376843)
chr1 (266-335)||(20925768-20925837)
chr1 (266-335)||(52634319-52634388)
chr1 (268-335)||(33796084-33796151)
chr1 (9-81)||(1009608-1009681)
chr1 (9-81)||(1926301-1926374)
chr1 (9-81)||(16376552-16376625)
chr1 (9-81)||(20925315-20925388)
chr1 (9-81)||(52634694-52634767)
chr1 (265-335)||(22132058-22132126)
chr1 (28-81)||(33796291-33796344)
chr1 (264-335)||(21406304-21406373)
chr1 (27-81)||(21406553-21406608)
chr1 (7-73)||(33796436-33796503)
chr1 (265-335)||(41801238-41801306)
chr1 (28-81)||(20229941-20229995)
chr1 (289-335)||(20230120-20230166)
chr1 (35-81)||(28195107-28195153)
chr1 (35-81)||(35982340-35982386)
chr1 (40-81)||(21740484-21740525)
chr1 (22-81)||(12271028-12271088)
chr1 (37-73)||(39244891-39244927)
chr1 (37-73)||(39248446-39248482)
chr1 (37-73)||(41389339-41389375)
chr1 (33-81)||(41801091-41801139)
chr1 (40-81)||(20315609-20315650)
chr1 (40-81)||(41306242-41306283)
chr1 (35-75)||(21740349-21740389)
chr1 (33-81)||(41801124-41801171)
[»] scaffold0372 (2 HSPs)
scaffold0372 (266-335)||(6279-6348)
scaffold0372 (9-80)||(6167-6239)
[»] scaffold0028 (1 HSPs)
scaffold0028 (266-335)||(60283-60353)
[»] scaffold0349 (2 HSPs)
scaffold0349 (266-335)||(11102-11170)
scaffold0349 (9-81)||(11402-11475)
[»] scaffold0166 (2 HSPs)
scaffold0166 (275-335)||(11027-11087)
scaffold0166 (28-81)||(10734-10787)
[»] scaffold1852 (1 HSPs)
scaffold1852 (268-335)||(781-848)
[»] scaffold0410 (1 HSPs)
scaffold0410 (268-335)||(14895-14962)
[»] scaffold0293 (2 HSPs)
scaffold0293 (265-335)||(21298-21367)
scaffold0293 (33-81)||(21162-21210)
[»] scaffold0575 (2 HSPs)
scaffold0575 (265-335)||(6920-6988)
scaffold0575 (33-81)||(6842-6889)
[»] scaffold0486 (2 HSPs)
scaffold0486 (268-335)||(8628-8695)
scaffold0486 (33-81)||(8885-8933)
[»] scaffold0157 (2 HSPs)
scaffold0157 (266-335)||(34089-34155)
scaffold0157 (7-81)||(33862-33940)
[»] scaffold0023 (1 HSPs)
scaffold0023 (268-335)||(11828-11895)
[»] scaffold0124 (2 HSPs)
scaffold0124 (264-335)||(25526-25595)
scaffold0124 (35-80)||(25446-25491)
[»] scaffold0525 (2 HSPs)
scaffold0525 (9-81)||(5006-5079)
scaffold0525 (264-330)||(5489-5553)
[»] scaffold0029 (5 HSPs)
scaffold0029 (28-81)||(79428-79481)
scaffold0029 (7-66)||(79475-79535)
scaffold0029 (289-335)||(62821-62867)
scaffold0029 (28-81)||(62568-62621)
scaffold0029 (28-81)||(66484-66537)
[»] scaffold0327 (3 HSPs)
scaffold0327 (33-81)||(19128-19176)
scaffold0327 (33-81)||(19232-19280)
scaffold0327 (265-335)||(18874-18942)
[»] scaffold0200 (3 HSPs)
scaffold0200 (33-81)||(11061-11109)
scaffold0200 (268-308)||(10834-10874)
scaffold0200 (28-81)||(11094-11148)
[»] scaffold0142 (2 HSPs)
scaffold0142 (265-335)||(8699-8767)
scaffold0142 (12-66)||(8445-8500)
[»] scaffold0380 (3 HSPs)
scaffold0380 (28-81)||(955-1009)
scaffold0380 (264-335)||(4025-4094)
scaffold0380 (264-307)||(1-42)
[»] scaffold0141 (2 HSPs)
scaffold0141 (7-81)||(15281-15359)
scaffold0141 (268-308)||(15546-15586)
[»] scaffold0013 (2 HSPs)
scaffold0013 (265-335)||(74291-74359)
scaffold0013 (28-67)||(74077-74117)
[»] scaffold0109 (1 HSPs)
scaffold0109 (289-335)||(37179-37225)
[»] scaffold0031 (1 HSPs)
scaffold0031 (265-335)||(37161-37230)
[»] scaffold0484 (1 HSPs)
scaffold0484 (7-64)||(76-134)
[»] scaffold1873 (1 HSPs)
scaffold1873 (264-327)||(691-753)
[»] scaffold0080 (2 HSPs)
scaffold0080 (298-335)||(28523-28560)
scaffold0080 (298-335)||(33988-34025)
[»] scaffold0299 (1 HSPs)
scaffold0299 (292-335)||(5876-5917)
[»] scaffold0601 (2 HSPs)
scaffold0601 (35-73)||(8555-8593)
scaffold0601 (35-81)||(8621-8667)
[»] scaffold0278 (1 HSPs)
scaffold0278 (40-81)||(6963-7004)
[»] scaffold0116 (2 HSPs)
scaffold0116 (40-81)||(44439-44480)
scaffold0116 (40-81)||(44504-44545)
[»] scaffold0043 (1 HSPs)
scaffold0043 (40-81)||(9072-9113)
[»] scaffold0001 (1 HSPs)
scaffold0001 (298-335)||(153803-153840)
[»] scaffold0004 (1 HSPs)
scaffold0004 (35-75)||(362226-362266)


Alignment Details
Target: scaffold0061 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 68514 - 68583
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  68514 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 68583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 68328 - 68392
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatata 72  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||    
T  68328 tggtgttagtatgtgttgattatattttcataagatgatgaatatgttgttgttatattattata 68392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 21974142 - 21974211
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21974142 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 21974211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 21978252 - 21978321
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21978252 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 21978321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 43250322 - 43250253
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43250322 gatgattatattgtgttgttttaaagttattaatgatgatgattacatgatgatatctatgagttgttaa 43250253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 268 - 335
Target Start/End: Original strand, 14399053 - 14399120
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14399053 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 14399120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 21410019 - 21409952
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21410019 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 21409952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 21804511 - 21804444
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21804511 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 21804444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 22111009 - 22110936
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  22111009 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 22110936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 43250769 - 43250696
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  43250769 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 43250696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 21973689 - 21973762
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||    
T  21973689 tggtgttagtatgtgttgattatattttcataagatgatgaataccttgttgttatattaatacaagaagatga 21973762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 21977780 - 21977842
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaata 70  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21977780 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaata 21977842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 23427945 - 23427877
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||||| |  ||||||||||||||||||||||||||||| |||||||||||||||||    
T  23427945 tgatgattatattgtgttgtct--aagttattagtgatgatgattacatgatgttatctatgagttgttaa 23427877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 23913384 - 23913316
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| |||||||||    
T  23913384 tgatgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctataagttgttaa 23913316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 44385793 - 44385861
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||  ||||| ||||||||||||||||||||||| |||||||||||||||||    
T  44385793 tgatgattatattgtgttgttt--aagttgttagtgatgatgattacatgatgttatctatgagttgttaa 44385861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 21386279 - 21386210
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  21386279 gtgatgattatattgtgtagttt--aagttattagtgatgatgattacatgatgttatctaggagttgttaa 21386210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 18863811 - 18863889
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  18863811 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 18863889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 30941271 - 30941349
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  30941271 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 30941349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 21829430 - 21829472
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  21829430 gatgattatattgtgttgttttaaagttattagtgatgatgat 21829472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 21829139 - 21829195
Alignment:
Q  9 tggtgttagtatgtgttgattata-ttttataagatgatgaatacgttgttgttata 64  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||    
T  21829139 tggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttattata 21829195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 15924297 - 15924344
Alignment:
Q  28 ttatatttt-ataagatgatgaatacgttgttgttatattaatataag 74  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15924297 ttatattttcataagatgatgaatacgttgttgttatattaatataag 15924344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 22110710 - 22110668
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  22110710 gatgattatattatgttgttttaaagttattagtgatgatgat 22110668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 18864076 - 18864116
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  18864076 tgattacattgtgttgttttaaagttattagtgatgatgat 18864116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 30941536 - 30941576
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  30941536 tgattacattgtgttgttttaaagttattagtgatgatgat 30941576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 20983485 - 20983525
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataaga 75  Q
    ||||||||||||||||| ||||||||||||||| |||||||    
T  20983485 ttataagatgatgaatatgttgttgttatattattataaga 20983525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 38550618 - 38550681
Alignment:
Q  18 tatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||| ||||||||| || |||||||||||| ||||||||||||||| ||||||| |||||    
T  38550618 tatgtgttg-ttatattttgatgagatgatgaatatgttgttgttatattattataagatgatga 38550681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 21977839 - 21977872
Alignment:
Q  48 aatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||||||| ||||||||||    
T  21977839 aatacgttgttgttatattaatacaagaagatga 21977872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 38550705 - 38550746
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  38550705 agatgatgaatatgttgttgttatattattataagatgatga 38550746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 20983551 - 20983591
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataaga 75  Q
    ||||||||||||||||| ||||| ||||||||| |||||||    
T  20983551 ttataagatgatgaatatgttgtggttatattattataaga 20983591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 2e-31; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 31845 - 31776
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31845 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 31776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 12706081 - 12706150
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12706081 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 12706150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 12713660 - 12713591
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12713660 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 12713591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 12717407 - 12717338
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12717407 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 12717338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 12722318 - 12722249
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12722318 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 12722249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 16908468 - 16908537
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16908468 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 16908537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 18278114 - 18278045
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18278114 gatgattatattgtgttgttttaaagttattagtgatgatgattgcatgatgatatctatgagttgttaa 18278045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 18282078 - 18282009
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18282078 gatgattatattgtgttgttttaaagtttttagtgatgatgattacatgatgatatctatgagttgttaa 18282009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 268 - 335
Target Start/End: Original strand, 2833442 - 2833509
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2833442 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 2833509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 15083344 - 15083277
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15083344 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 15083277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 32067 - 31994
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  32067 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 31994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 12713882 - 12713809
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  12713882 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 12713809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 12717706 - 12717633
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  12717706 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 12717633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 12722617 - 12722544
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  12722617 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 12722544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 39721314 - 39721247
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  39721314 tgattacattgtgttgttttaaagttattagtaatgatgattacatgatgatatctatgagttgttaa 39721247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 25928330 - 25928399
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  25928330 tgatgattatattgtgttgttt-aaagttattagtgatgatgattacatgatgttatctatgagttgttaa 25928399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 268 - 335
Target Start/End: Original strand, 7520176 - 7520243
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  7520176 tgattacattgtgttgttttaaagttatcagtgatgatgattacatgatgttatctatgagttgttaa 7520243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 20486861 - 20486793
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||    
T  20486861 tgatgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaa 20486793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 268 - 334
Target Start/End: Original strand, 2531293 - 2531359
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgtta 334  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  2531293 tgattacattgtgttgttttaaagttattagtgatgatgattatatgaagatatctatgagttgtta 2531359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 10607280 - 10607348
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||  || |||||||||||||||||||||||||| |||||||||||||||||    
T  10607280 tgatgattatattgtgttgttt--aatttattagtgatgatgattacatgatgttatctatgagttgttaa 10607348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 2833200 - 2833253
Alignment:
Q  28 ttatattttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  2833200 ttatattttataagatgatgaatacgttgttgttatattattataagaagatga 2833253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 18278317 - 18278264
Alignment:
Q  28 ttatattttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18278317 ttatattttataagatgatgaatacattgttgttatattaatataagaagatga 18278264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 18282280 - 18282227
Alignment:
Q  28 ttatattttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18282280 ttatattttataagatgatgaatacattgttgttatattaatataagaagatga 18282227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 9752466 - 9752535
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||| ||||||||||||||  ||||||||||||||||| ||||||||||| |||||||||||||||||    
T  9752466 gtgatgatcatattgtgttgttt--aagttattagtgatgataattacatgatgttatctatgagttgttaa 9752535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 18301471 - 18301402
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  18301471 gtgacgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctaggagttgttaa 18301402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 16582540 - 16582472
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||  || |||||||||||||||||||||||||| ||| |||||||||||||    
T  16582540 tgatgattatattgtgttgttt--aatttattagtgatgatgattacatgatgttatttatgagttgttaa 16582472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 18278401 - 18278344
Alignment:
Q  9 tggtgttagtatgtgttgattatattt-tataagatgatgaatacgttgttgttatat 65  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  18278401 tggtgttagtatgtgttgattatatttatataagatgatgaatacgttgttgctatat 18278344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 45171207 - 45171285
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  45171207 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 45171285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 72341 - 72383
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  72341 gatgattatattgtgttgttttaaagttattagtgatgatgat 72383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 76450 - 76492
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  76450 gatgattatattgtgttgttttaaagttattagtgatgatgat 76492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 2531050 - 2531104
Alignment:
Q  28 ttatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  2531050 ttatattttcataagatgatgattacgttgttgttatattaatataagaagatga 2531104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 18282364 - 18282306
Alignment:
Q  9 tggtgttagtatgtgttgattatattt-tataagatgatgaatacgttgttgttatatt 66  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||    
T  18282364 tggtgttagtatgtgttgattatatttatataagatgatgaatacgtcgttgctatatt 18282306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 289 - 335
Target Start/End: Complemental strand, 26291254 - 26291208
Alignment:
Q  289 aagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  26291254 aagttattagtgatgatgattacatgatgttatctatgagttgttaa 26291208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 26291428 - 26291374
Alignment:
Q  28 ttatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  26291428 ttatattttcataagatgatgaatacgttgttgttatattaatataagaaaatga 26291374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 1859979 - 1860049
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtga-tgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||||||||  ||||||||||||| ||||||||||| |||| ||| |||||||||||||    
T  1859979 gtgatgattatattgtgttgttt--aagttattagtgattgatgattacaggatgttatatatgagttgttaa 1860049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 13919370 - 13919440
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtga-tgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||||||||  ||||||||||||| ||||||||||| |||| ||| |||||||||||||    
T  13919370 gtgatgattatattgtgttgttt--aagttattagtgattgatgattacaggatgttatatatgagttgttaa 13919440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 71970 - 72026
Alignment:
Q  9 tggtgttagtatgtgttgattata-ttttataagatgatgaatacgttgttgttata 64  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||    
T  71970 tggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttattata 72026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 76079 - 76135
Alignment:
Q  9 tggtgttagtatgtgttgattata-ttttataagatgatgaatacgttgttgttata 64  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||    
T  76079 tggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttattata 76135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 12705815 - 12705879
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatata 72  Q
    |||||||||||||||||||||||||||| |||| | |||||||| ||||||||||||||| ||||    
T  12705815 tggtgttagtatgtgttgattatattttcataaaaagatgaatatgttgttgttatattattata 12705879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 18282311 - 18282274
Alignment:
Q  29 tatattttataagatgatgaatacgttgttgttatatt 66  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18282311 tatattttataagatgatgaatacgttgttgttatatt 18282274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 39268301 - 39268341
Alignment:
Q  295 ttagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  39268301 ttagtgatgatgattacatgatgttatctatgagttgttaa 39268341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 45171472 - 45171512
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  45171472 tgattacattgtgttgttttaaagttattagtgatgatgat 45171512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 11660370 - 11660333
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||||| |||||||||||||||||    
T  11660370 gtgatgatgattacatgatgttatctatgagttgttaa 11660333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 13891718 - 13891681
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||||| |||||||||||||||||    
T  13891718 gtgatgatgattacatgatgttatctatgagttgttaa 13891681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 18278348 - 18278311
Alignment:
Q  29 tatattttataagatgatgaatacgttgttgttatatt 66  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  18278348 tatatcttataagatgatgaatacgttgttgttatatt 18278311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 6170760 - 6170800
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataaga 75  Q
    ||||||||||||||||| ||||||||||||||| |||||||    
T  6170760 ttataagatgatgaatatgttgttgttatattattataaga 6170800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 15112412 - 15112352
Alignment:
Q  22 tgttgattatatt-ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||| ||||||| ||||||||||||||||| ||||||||||||||| ||| ||| |||||    
T  15112412 tgttgcttatattattataagatgatgaatatgttgttgttatattattatgagatgatga 15112352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 15115984 - 15115924
Alignment:
Q  22 tgttgattatatt-ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||| ||||||| ||||||||||||||||| ||||||||||||||| ||| ||| |||||    
T  15115984 tgttgcttatattattataagatgatgaatatgttgttgttatattattatgagatgatga 15115924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 18424637 - 18424601
Alignment:
Q  37 ataagatgatgaatacgttgttgttatattaatataa 73  Q
    ||||||||||||||||||||||||||||||| |||||    
T  18424637 ataagatgatgaatacgttgttgttatattattataa 18424601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 18424750 - 18424714
Alignment:
Q  37 ataagatgatgaatacgttgttgttatattaatataa 73  Q
    ||||||||||||||||||||||||||||||| |||||    
T  18424750 ataagatgatgaatacgttgttgttatattattataa 18424714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 25928194 - 25928242
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||| ||||||||||||||  ||||||| |||||    
T  25928194 ttttataagatgatgaatatgttgttgttatatttttataagatgatga 25928242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 6170826 - 6170872
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||| |||||||| |||||| ||||||| |||||    
T  6170826 ttataagatgatgaatatgttgttgtcatattattataagatgatga 6170872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 9390377 - 9390423
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||| | ||||||||||||| ||||||| |||||    
T  9390377 ttataagatgatgaatatgatgttgttatattattataagatgatga 9390423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 16582719 - 16582665
Alignment:
Q  28 ttatattt-tataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||| ||||||||| |||||| ||||||||||||||| ||||||| |||||    
T  16582719 ttatatttctataagatggtgaatatgttgttgttatattattataagatgatga 16582665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 2833173 - 2833206
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatatt 66  Q
    ||||||||||||||||||| ||||||||||||||    
T  2833173 ttttataagatgatgaatatgttgttgttatatt 2833206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 8467905 - 8467864
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  8467905 agatgatgaatatgttgttgttatattattataagatgatga 8467864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 10502048 - 10502089
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||| ||||| ||||||||||||||||||||||| |||||    
T  10502048 agatgaggaatatgttgttgttatattaatataagatgatga 10502089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 10607142 - 10607179
Alignment:
Q  36 tataagatgatgaatacgttgttgttatattaatataa 73  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  10607142 tataagatgatgaatatgttgttgttatattattataa 10607179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 13892097 - 13892064
Alignment:
Q  302 tgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||| |||||||||||||||||    
T  13892097 tgatgattacatgatgttatctatgagttgttaa 13892064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 14270754 - 14270795
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  14270754 agatgatgaatatgttgttgttatattattataagatgatga 14270795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 17231900 - 17231859
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  17231900 agatgatgaatatgttgttgttatattattataagatgatga 17231859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 17231965 - 17231924
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  17231965 agatgatgaatatgttgttgttatattattataagatgatga 17231924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 17232030 - 17231989
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  17232030 agatgatgaatatgttgttgttatattattataagatgatga 17231989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 17232095 - 17232054
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  17232095 agatgatgaatatgttgttgttatattattataagatgatga 17232054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 2e-31; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 8242532 - 8242463
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8242532 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 8242463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 11565521 - 11565452
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11565521 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 11565452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 12620292 - 12620361
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12620292 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 12620361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 22861875 - 22861806
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22861875 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 22861806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 23988423 - 23988354
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23988423 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 23988354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 11716898 - 11716968
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11716898 tgatgtttatattgtgttgttttaaagttattaatgatgatgattacatgatgatatctatgagttgttaa 11716968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 8242832 - 8242759
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  8242832 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 8242759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 11565820 - 11565747
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  11565820 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 11565747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 12619990 - 12620063
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  12619990 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 12620063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 23988918 - 23988845
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  23988918 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 23988845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 22948074 - 22948002
Alignment:
Q  10 ggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  22948074 ggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 22948002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 22952030 - 22951958
Alignment:
Q  10 ggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  22952030 ggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 22951958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 23870518 - 23870446
Alignment:
Q  10 ggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  23870518 ggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 23870446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 23874474 - 23874402
Alignment:
Q  10 ggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  23874474 ggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 23874402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 27555657 - 27555590
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27555657 tgattacattgagttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 27555590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 2076405 - 2076337
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||    
T  2076405 tgatgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaa 2076337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 268 - 335
Target Start/End: Original strand, 22075347 - 22075418
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatg----atatctatgagttgttaa 335  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||    
T  22075347 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatatatctatgagttgttaa 22075418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 18918539 - 18918608
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||| | ||||  ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  18918539 gtgatgattatattgtatagttt--aagttattagtgatgatgattacatgatgttatctaggagttgttaa 18918608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 19869559 - 19869481
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  19869559 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 19869481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 23394013 - 23393935
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  23394013 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 23393935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 23413921 - 23413843
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  23413921 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 23413843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 1643606 - 1643552
Alignment:
Q  28 ttatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  1643606 ttatattttcataagatgatgaatacgttgttgttatattaatataaggagatga 1643552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 14471300 - 14471234
Alignment:
Q  7 tatggtgttagtatgtgttgattatatt-ttataagatgatgaatacgttgttgttatattaatata 72  Q
    ||||||||||||||||||||||||||||  ||||||| |||||||| ||||||||||||||| ||||    
T  14471300 tatggtgttagtatgtgttgattatattaatataagaagatgaatatgttgttgttatattattata 14471234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 22947776 - 22947734
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22947776 gatgattatattgtgttgttttaaagttattagtgatgatgat 22947734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 22951732 - 22951690
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22951732 gatgattatattgtgttgttttaaagttattagtgatgatgat 22951690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 289 - 335
Target Start/End: Complemental strand, 23400775 - 23400729
Alignment:
Q  289 aagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  23400775 aagttattagtgatgatgattacatgatgttatctatgagttgttaa 23400729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 23870220 - 23870178
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23870220 gatgattatattgtgttgttttaaagttattagtgatgatgat 23870178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 23874176 - 23874134
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23874176 gatgattatattgtgttgttttaaagttattagtgatgatgat 23874134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 22075110 - 22075158
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||    
T  22075110 ttttataagatgattaatangttgttgttatattaatataagaagatga 22075158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 16759195 - 16759139
Alignment:
Q  9 tggtgttagtatgtgttgattata-ttttataagatgatgaatacgttgttgttata 64  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||    
T  16759195 tggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttattata 16759139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 334
Target Start/End: Complemental strand, 14471001 - 14470933
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgtta 334  Q
    |||||||||||||||||| ||||  |||||||||||||||| ||||| |||| ||||| ||||||||||||    
T  14471001 gtgatgattatattgtgtagttt--aagttattagtgatgaagattatatgaagatatttatgagttgtta 14470933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 1643372 - 1643321
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatg 317  Q
    |||||||||||||||||| ||||  |||||||||||||||||||||||||||||    
T  1643372 gtgatgattatattgtgtagttt--aagttattagtgatgatgattacatgatg 1643321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 16758824 - 16758782
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  16758824 gatgattatattgtgttgttttaaatttattagtgatgatgat 16758782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 18918416 - 18918469
Alignment:
Q  28 ttatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  18918416 ttatattttcataagatgatgaatacgttgttgttata-taatataagaagatga 18918469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 19869294 - 19869254
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  19869294 tgattacattgtgttgttttaaagttattagtgatgatgat 19869254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 23393748 - 23393708
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  23393748 tgattacattgtgttgttttaaagttattagtgatgatgat 23393708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 23413656 - 23413616
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  23413656 tgattacattgtgttgttttaaagttattagtgatgatgat 23413616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 335
Target Start/End: Original strand, 18953465 - 18953511
Alignment:
Q  289 aagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||||    
T  18953465 aagttattagtgatgatgattacatgatgtcatctaggagttgttaa 18953511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 22075077 - 22075119
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataaga 75  Q
    ||||||||||||||||||| ||||||||||||||  |||||||    
T  22075077 ttttataagatgatgaatatgttgttgttatatttttataaga 22075119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 16623190 - 16623154
Alignment:
Q  37 ataagatgatgaatacgttgttgttatattaatataa 73  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  16623190 ataagatgatgaatatgttgttgttatattattataa 16623154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 81
Target Start/End: Original strand, 18953242 - 18953270
Alignment:
Q  53 gttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||    
T  18953242 gttgttgttatattaatataagaagatga 18953270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 2e-31; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 19474131 - 19474200
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19474131 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 19474200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 20294634 - 20294565
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20294634 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 20294565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 18354915 - 18354848
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18354915 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 18354848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 19473830 - 19473905
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  19473830 tatggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 19473905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 20294859 - 20294786
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  20294859 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 20294786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 275 - 335
Target Start/End: Original strand, 24768530 - 24768590
Alignment:
Q  275 attgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24768530 attgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 24768590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 18355108 - 18355055
Alignment:
Q  28 ttatattttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18355108 ttatattttataagatgatgaatacgttgttgttatattaatataagaagatga 18355055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 15238076 - 15238145
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||||||||||||||    
T  15238076 gtgatgattatattgtgtagttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaa 15238145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 20912211 - 20912280
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||||||| |||||||||||||||||    
T  20912211 gtgatgattatattgtattgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaa 20912280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 22108409 - 22108477
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||| |||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||    
T  22108409 tgatgattctattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaa 22108477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 11226493 - 11226427
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatata 72  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||    
T  11226493 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttatattattata 11226427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 24768237 - 24768290
Alignment:
Q  28 ttatattttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24768237 ttatactttataagatgatgaatacgttgttgttatattaatataagaagatga 24768290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 264 - 333
Target Start/End: Original strand, 40727358 - 40727425
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgtt 333  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||||| ||||||||| |||||||    
T  40727358 gtgatgattatattgtgtagttt--aagttattagtgatgatgattacatgaagatatctataagttgtt 40727425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 11219927 - 11219849
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgt---tgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||   |||||||||| |||| ||||||||    
T  11219927 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgctgttatattattatatgaagatga 11219849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 11224513 - 11224435
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgt---tgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||   |||||||||| |||| ||||||||    
T  11224513 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgctgttatattattatatgaagatga 11224435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 11230325 - 11230247
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgt---tgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||   |||||||||| |||| ||||||||    
T  11230325 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgctgttatattattatatgaagatga 11230247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 18355234 - 18355179
Alignment:
Q  7 tatggtgttagtatgtgttgattata-ttttataagatgatgaatacgttgttgtt 61  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  18355234 tatggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttgtt 18355179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 22120551 - 22120619
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||| |||  || ||||||||||||||||||| |||||| |||||||||||||||||    
T  22120551 tgatgattatattgtgttattt--aatttattagtgatgatgattatatgatgttatctatgagttgttaa 22120619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 40727069 - 40727122
Alignment:
Q  9 tggtgttagtatgtgttgattata-ttttataagatgatgaatacgttgttgtt 61  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  40727069 tggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttgtt 40727122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 11228329 - 11228257
Alignment:
Q  13 gttagtatgtgttgattatatttt-ataagatgatgaatacgttgt---tgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||   |||||||||| |||| ||||||||    
T  11228329 gttagtatgtgttgattatattttgataagatgatgaatatgttgttgctgttatattattatatgaagatga 11228257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 11219662 - 11219622
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  11219662 tgattacattgtgttgttttaaagttattagtgatgatgat 11219622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 11224248 - 11224208
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  11224248 tgattacattgtgttgttttaaagttattagtgatgatgat 11224208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 11226264 - 11226224
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  11226264 tgattacattgtgttgttttaaagttattagtgatgatgat 11226224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 11228070 - 11228030
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  11228070 tgattacattgtgttgttttaaagttattagtgatgatgat 11228030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 11230060 - 11230020
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  11230060 tgattacattgtgttgttttaaagttattagtgatgatgat 11230020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 20912104 - 20912144
Alignment:
Q  41 gatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  20912104 gatgatgaatatattgttgttatattaatataagaagatga 20912144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 22108196 - 22108236
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataa 73  Q
    ||||||||||||||||||| ||||||||||||||| |||||    
T  22108196 ttttataagatgatgaatatgttgttgttatattattataa 22108236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 5889817 - 5889863
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||| | ||||||||||||| ||||||| |||||    
T  5889817 ttataagatgatgaatatgatgttgttatattattataagatgatga 5889863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 22120335 - 22120381
Alignment:
Q  28 ttatattt-tataagatgatgaatacgttgttgttatattaatataa 73  Q
    |||||||| |||||||||||||||| ||||||||||||||| |||||    
T  22120335 ttatatttctataagatgatgaatatgttgttgttatattattataa 22120381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 67
Target Start/End: Original strand, 5889886 - 5889918
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatatta 67  Q
    ||||||||||||||||| |||||||||||||||    
T  5889886 ttataagatgatgaatatgttgttgttatatta 5889918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 20912132 - 20912176
Alignment:
Q  36 tataagatgatgaatacgttgttgttatattaatataagaagatg 80  Q
    ||||||| |||||||| ||||||||||||||| ||||||| ||||    
T  20912132 tataagaagatgaatatgttgttgttatattattataagatgatg 20912176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 9555189 - 9555120
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9555189 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 9555120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 14758950 - 14759019
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14758950 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 14759019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 14955718 - 14955787
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14955718 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 14955787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 17807174 - 17807105
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17807174 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 17807105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 25688562 - 25688493
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25688562 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 25688493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 4562732 - 4562801
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4562732 gatgattatattgggttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 4562801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 5758414 - 5758483
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5758414 gatgattctattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 5758483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 33740956 - 33740887
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  33740956 gatgattatattgtgttgttttaaaattattagtgatgatgattacatgatgatatctatgagttgttaa 33740887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 268 - 335
Target Start/End: Original strand, 20158408 - 20158475
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20158408 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 20158475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 4562433 - 4562506
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  4562433 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 4562506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 9555488 - 9555415
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  9555488 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 9555415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 14758574 - 14758647
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  14758574 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 14758647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 14955339 - 14955412
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  14955339 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 14955412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 33741258 - 33741185
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  33741258 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 33741185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 25688860 - 25688788
Alignment:
Q  10 ggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  25688860 ggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 25688788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 268 - 335
Target Start/End: Original strand, 20161084 - 20161151
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20161084 tgattacattgtgttgttttaaagttattagtgatgacgattacatgatgatatctatgagttgttaa 20161151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 268 - 335
Target Start/End: Original strand, 20163859 - 20163926
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20163859 tgattacattgtgttgttttaaagttattagtgatgacgattacatgatgatatctatgagttgttaa 20163926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 5757958 - 5758031
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||    
T  5757958 tggtgttagtatgtgttgattatattttcataagatgatgaatatgttgttgttatattaatacaagaagatga 5758031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 23996925 - 23996994
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||    
T  23996925 gtgatgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaa 23996994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 10711943 - 10711876
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  10711943 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgttatctaggagttgttaa 10711876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 10925713 - 10925646
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  10925713 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgttatctaggagttgttaa 10925646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 12423062 - 12422994
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||    
T  12423062 tgatgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaa 12422994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 12486388 - 12486322
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  12486388 gatgattatattgtgttgttttaaagttattagtga---tgattacatgatgatatctatgagttgttaa 12486322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 17052405 - 17052473
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||    
T  17052405 tgatgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaa 17052473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 631706 - 631775
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||    
T  631706 gtgacgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaa 631775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 22634885 - 22634954
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||    
T  22634885 gtgatgatcatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaa 22634954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 27532872 - 27532803
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  27532872 gtgatgattatattgtgtagttt--aagttattagtgatgatgattacatgatgttatctaggagttgttaa 27532803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 12486615 - 12486537
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  12486615 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 12486537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 27532995 - 27532942
Alignment:
Q  28 ttatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  27532995 ttatattttcataagatgatgaatacgttgttgttata-taatataagaagatga 27532942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 13813820 - 13813860
Alignment:
Q  295 ttagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  13813820 ttagtgatgatgattacatgatgttatctatgagttgttaa 13813860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 13818308 - 13818348
Alignment:
Q  295 ttagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  13818308 ttagtgatgatgattacatgatgttatctatgagttgttaa 13818348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 631561 - 631636
Alignment:
Q  7 tatggtgttagtatgtgttgattatatt-ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||| ||||| |||||| || ||||||| |||||| |||||||||| ||||||||||||||| ||||| |||||||    
T  631561 tatgatgttattatgtgctgtttatattattataaaatgatgaatatgttgttgttatattattataaaaagatga 631636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 15189783 - 15189737
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  15189783 ttataagatgatgaatatgttgttgttatattattataagatgatga 15189737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 15189816 - 15189770
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  15189816 ttataagatgatgaatatgttgttgttatattattataagatgatga 15189770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 24048375 - 24048412
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||||| |||||||||||||||||    
T  24048375 gtgatgatgattacatgatgttatctatgagttgttaa 24048412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 15223948 - 15223912
Alignment:
Q  37 ataagatgatgaatacgttgttgttatattaatataa 73  Q
    ||||||||||||||||||||||||||||||| |||||    
T  15223948 ataagatgatgaatacgttgttgttatattattataa 15223912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 12423234 - 12423189
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatg 80  Q
    |||||| |||||||||| ||||||||||||||| ||||||| ||||    
T  12423234 ttataaaatgatgaatatgttgttgttatattattataagacgatg 12423189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 15481998 - 15482039
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  15481998 agatgatgaatatgttgttgttatattattataagatgatga 15482039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 19857048 - 19857007
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  19857048 agatgatgaatatgttgttgttatattattataagatgatga 19857007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 2e-31; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 7108358 - 7108289
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7108358 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 7108289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 7112293 - 7112224
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7112293 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 7112224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 11068733 - 11068664
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11068733 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 11068664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 11167052 - 11167121
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11167052 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 11167121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 22320249 - 22320180
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22320249 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 22320180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 22335304 - 22335235
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22335304 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 22335235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 55021496 - 55021427
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55021496 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 55021427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 14498067 - 14497998
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14498067 gatgattatattgtgttgttttaaagttattagcgatgatgattacatgatgatatctatgagttgttaa 14497998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 15616297 - 15616228
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15616297 gatgattataatgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 15616228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 28948581 - 28948512
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28948581 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctataagttgttaa 28948512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 5219965 - 5219898
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5219965 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 5219898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 11069111 - 11069036
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  11069111 tatggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 11069036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 11853824 - 11853757
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11853824 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 11853757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 268 - 335
Target Start/End: Original strand, 37440641 - 37440708
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37440641 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 37440708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 7108657 - 7108584
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  7108657 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 7108584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 7112592 - 7112519
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  7112592 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 7112519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 14498366 - 14498293
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  14498366 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 14498293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 15616596 - 15616523
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  15616596 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 15616523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 22320625 - 22320552
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  22320625 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 22320552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 22335680 - 22335607
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  22335680 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 22335607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 28948803 - 28948730
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  28948803 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 28948730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 30064808 - 30064735
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  30064808 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 30064735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 55021946 - 55021873
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  55021946 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 55021873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 268 - 335
Target Start/End: Original strand, 11301626 - 11301693
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11301626 tgattacattgtgttgttttaaagttattagtgatgatgattgcatgatgatatctatgagttgttaa 11301693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 14664543 - 14664476
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14664543 tgattacattgtgttgttttaaagttattagtgatgatgattacataatgatatctatgagttgttaa 14664476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 14667707 - 14667640
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14667707 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgagatctatgagttgttaa 14667640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 11166676 - 11166749
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||    
T  11166676 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaggatga 11166749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 16795622 - 16795554
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||    
T  16795622 tgatgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaa 16795554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 14067672 - 14067747
Alignment:
Q  7 tatggtgttagtatgtgttgattatattt-tataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||| |||||    
T  14067672 tatggtgtcagtatgtgttgattatatttatataagatgatgaatacgttgttgttatatttttataagatgatga 14067747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 267 - 335
Target Start/End: Original strand, 12853325 - 12853391
Alignment:
Q  267 atgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||  || |||||||||||||||||||||||||| |||||||||||||||||    
T  12853325 atgattatattgtgttgttt--aatttattagtgatgatgattacatgatgttatctatgagttgttaa 12853391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 11301389 - 11301437
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11301389 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 11301437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 4590119 - 4590188
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||| ||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  4590119 gtgacgattatattgtgtagttt--aagttattagtgatgatgattacatgatgttatctaggagttgttaa 4590188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 264 - 331
Target Start/End: Original strand, 14068021 - 14068086
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttg 331  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||| ||||||    
T  14068021 gtgatgattatattgtgtagttt--aagttattagtgatgatgattacatgatgttatctaggagttg 14068086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 14664783 - 14664735
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14664783 ttttataagatgatgaatacgtttttgttatattaatataagaagatga 14664735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 14667947 - 14667899
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14667947 ttttataagatgatgaatatgttgttgttatattaatataagaagatga 14667899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 15963869 - 15963791
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  15963869 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 15963791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 15967793 - 15967715
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  15967793 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 15967715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 15971717 - 15971639
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  15971717 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 15971639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 4112607 - 4112649
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4112607 gatgattatattgtgttgttttaaagttattagtgatgatgat 4112649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 289 - 335
Target Start/End: Original strand, 18933337 - 18933383
Alignment:
Q  289 aagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  18933337 aagttattagtgatgatgattacatgatgttatctatgagttgttaa 18933383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 289 - 335
Target Start/End: Complemental strand, 30064482 - 30064436
Alignment:
Q  289 aagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  30064482 aagttattagtgatgatgattacatgatgttatctatgagttgttaa 30064436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 267 - 308
Target Start/End: Original strand, 4108759 - 4108800
Alignment:
Q  267 atgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4108759 atgattatattgtgttgttttaaagttattagtgatgatgat 4108800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 14670142 - 14670077
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||  |||||||||||||||||   ||||||||| |||||||||||||||||    
T  14670142 tgatgattatattgtgttgttt--aagttattagtgatgat---tacatgatgttatctatgagttgttaa 14670077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 15463999 - 15463929
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtga-tgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||||||||  ||||||||||||| ||||||||||| |||| ||| |||||||||||||    
T  15463999 gtgatgattatattgtgttgttt--aagttattagtgattgatgattacaggatgttatatatgagttgttaa 15463929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 4108387 - 4108443
Alignment:
Q  9 tggtgttagtatgtgttgattata-ttttataagatgatgaatacgttgttgttata 64  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||    
T  4108387 tggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttattata 4108443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 4112239 - 4112295
Alignment:
Q  9 tggtgttagtatgtgttgattata-ttttataagatgatgaatacgttgttgttata 64  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||    
T  4112239 tggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttattata 4112295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 17318468 - 17318537
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||| ||||  ||||||||||||||||||| ||||||| | |||||| ||||||||||    
T  17318468 gtgatgattatattgtgtagttt--aagttattagtgatgatgaatacatgaagttatctaggagttgttaa 17318537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 4589893 - 4589936
Alignment:
Q  37 ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  4589893 ataagatgatgaatacgttgttgttata-taatataagaagatga 4589936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 15963604 - 15963564
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  15963604 tgattacattgtgttgttttaaagttattagtgatgatgat 15963564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 15967528 - 15967488
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  15967528 tgattacattgtgttgttttaaagttattagtgatgatgat 15967488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 15971452 - 15971412
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  15971452 tgattacattgtgttgttttaaagttattagtgatgatgat 15971412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 14067732 - 14067777
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||   |||||||||||||||||||    
T  14067732 ttttataagatgatgaatacgttgttg---tattaatataagaagatga 14067777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 18440583 - 18440629
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  18440583 ttataagatgatgaatatgttgttgttatattattataagatgatga 18440629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 19485657 - 19485703
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  19485657 ttataagatgatgaatatgttgttgttatattattataagatgatga 19485703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 49390328 - 49390374
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  49390328 ttataagatgatgaatatgttgttgttatattattataagatgatga 49390374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 335
Target Start/End: Complemental strand, 12337348 - 12337307
Alignment:
Q  292 ttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||||||||||||||  |||||||||||||    
T  12337348 ttattagtgatgatgattacatgatgata--tatgagttgttaa 12337307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 16751580 - 16751616
Alignment:
Q  37 ataagatgatgaatacgttgttgttatattaatataa 73  Q
    ||||||||||||||||||||||||||||||| |||||    
T  16751580 ataagatgatgaatacgttgttgttatattattataa 16751616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 19774584 - 19774548
Alignment:
Q  37 ataagatgatgaatacgttgttgttatattaatataa 73  Q
    ||||||||||||||||||||||||||||||| |||||    
T  19774584 ataagatgatgaatacgttgttgttatattattataa 19774548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 335
Target Start/End: Original strand, 10834935 - 10834969
Alignment:
Q  301 atgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||| |||||||||||||||||    
T  10834935 atgatgattacatgatgttatctatgagttgttaa 10834969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 14681664 - 14681601
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||  ||||||||||   |||||||||||||||| ||||  |||||||||||    
T  14681664 tgatgattatattgtgttgttt--aagttattag---tgatgattacatgatgttatc--tgagttgttaa 14681601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 18440505 - 18440551
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||| ||||||| ||||||| ||||||| |||||    
T  18440505 ttataagatgatgaatatgttgttgctatattattataagatgatga 18440551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 19485579 - 19485625
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||| ||||||| ||||||| ||||||| |||||    
T  19485579 ttataagatgatgaatatgttgttgctatattattataagatgatga 19485625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 8928858 - 8928895
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  8928858 gtgatgatgattgcatgatgttatctatgagttgttaa 8928895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 13435906 - 13435869
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  13435906 gtgatgatgattacatgatgttatatatgagttgttaa 13435869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 311
Target Start/End: Original strand, 8490350 - 8490395
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattac 311  Q
    |||||||||||||||||| ||||  ||||||||||||||| |||||||    
T  8490350 gtgatgattatattgtgtagttt--aagttattagtgatggtgattac 8490395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 81
Target Start/End: Original strand, 27410959 - 27410987
Alignment:
Q  53 gttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||    
T  27410959 gttgttgttatattaatataagaagatga 27410987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 2e-31; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 24630006 - 24630075
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24630006 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 24630075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 24645271 - 24645202
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24645271 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 24645202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 24648047 - 24647978
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24648047 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 24647978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 27600491 - 27600422
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27600491 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 27600422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 30346616 - 30346685
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30346616 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 30346685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 10103255 - 10103324
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10103255 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgttgatatctatgagttgttaa 10103324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 12902565 - 12902634
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12902565 gatgattatattgtgttgttttaaagttattagtgatgatgattacataatgatatctatgagttgttaa 12902634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 27380952 - 27381021
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27380952 gatgattatatggtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 27381021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 27384922 - 27384991
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27384922 gatgattatatggtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 27384991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 10102956 - 10103029
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  10102956 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 10103029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 24629627 - 24629700
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  24629627 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 24629700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 27600790 - 27600717
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  27600790 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 27600717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 30346163 - 30346236
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  30346163 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 30346236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 268 - 334
Target Start/End: Complemental strand, 31344035 - 31343969
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgtta 334  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31344035 tgattacattgtgttgttttaaagttattagtgatgatgattacatgaagatatctatgagttgtta 31343969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 27384546 - 27384619
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||    
T  27384546 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgtcgttatattaatacaagaagatga 27384619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 27380500 - 27380571
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagat 79  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||    
T  27380500 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgtcgttatattaatacaagaagat 27380571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 265 - 333
Target Start/End: Complemental strand, 9784113 - 9784047
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgtt 333  Q
    |||| |||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||    
T  9784113 tgataattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgtt 9784047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 31344274 - 31344221
Alignment:
Q  28 ttatattttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  31344274 ttatattttataagatgatgaatacgttattgttatattaatacaagaagatga 31344221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 41532149 - 41532227
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  41532149 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 41532227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 1282396 - 1282318
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  1282396 tatggtgttagtatgtgttgattacattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 1282318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 24648313 - 24648249
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatata 72  Q
    |||||||||||||||||||||||||||| |||| | |||||||| ||||||||||||||| ||||    
T  24648313 tggtgttagtatgtgttgattatattttcataaaaagatgaatatgttgttgttatattattata 24648249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 41532414 - 41532454
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  41532414 tgattacattgtgttgttttaaagttattagtgatgatgat 41532454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 1009382 - 1009313
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1009382 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 1009313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 1926754 - 1926823
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1926754 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 1926823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 16376774 - 16376843
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16376774 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 16376843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 20925768 - 20925837
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20925768 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 20925837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 52634388 - 52634319
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52634388 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 52634319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 33796151 - 33796084
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33796151 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 33796084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 1009681 - 1009608
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  1009681 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 1009608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 1926301 - 1926374
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  1926301 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 1926374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 16376552 - 16376625
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  16376552 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 16376625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 20925315 - 20925388
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  20925315 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 20925388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 52634767 - 52634694
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  52634767 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 52634694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 22132058 - 22132126
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||    
T  22132058 tgatgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaa 22132126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 33796344 - 33796291
Alignment:
Q  28 ttatattttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33796344 ttatattttataagatgatgaatacgttgttgttatattaatataagaagatga 33796291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 21406373 - 21406304
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  21406373 gtgatgattatattgtgtagttt--aagttattagtgatgatgattacatgatgttatctaggagttgttaa 21406304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 21406608 - 21406553
Alignment:
Q  27 attatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21406608 attatattttcataagatgatgaatacgttgttgttatattaatataagaagatga 21406553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 33796503 - 33796436
Alignment:
Q  7 tatggtgttagtatgtgttgattata-ttttataagatgatgaatacgttgttgttatattaatataa 73  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||| |||||    
T  33796503 tatggtgttagtatgtgttgattatatttttataagatgatgtatatgttgttgttatattattataa 33796436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 41801238 - 41801306
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||  || |||||||||||||||||||||||||  |||||||||||||||||    
T  41801238 tgatgattatattgtgttgttt--aatttattagtgatgatgattacatgatattatctatgagttgttaa 41801306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 20229941 - 20229995
Alignment:
Q  28 ttatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20229941 ttatattttcataagatgatgaatacgttgttgttatattaatataagaagatga 20229995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 289 - 335
Target Start/End: Original strand, 20230120 - 20230166
Alignment:
Q  289 aagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  20230120 aagttattagtgatgatgattacatgatgttatctatgagttgttaa 20230166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 28195107 - 28195153
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  28195107 ttataagatgatgaatatgttgttgttatattattataagatgatga 28195153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 35982340 - 35982386
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  35982340 ttataagatgatgaatatgttgttgttatattattataagatgatga 35982386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 21740484 - 21740525
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| ||||||| |||||    
T  21740484 agatgatgaatacgttgttgttatattattataagatgatga 21740525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 12271088 - 12271028
Alignment:
Q  22 tgttgattatatt-ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||| ||||||| ||||||||||||||||| ||||||||||||||| ||| ||| |||||    
T  12271088 tgttgcttatattattataagatgatgaatatgttgttgttatattattatgagatgatga 12271028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 39244891 - 39244927
Alignment:
Q  37 ataagatgatgaatacgttgttgttatattaatataa 73  Q
    ||||||||||||||||||||||||||||||| |||||    
T  39244891 ataagatgatgaatacgttgttgttatattattataa 39244927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 39248446 - 39248482
Alignment:
Q  37 ataagatgatgaatacgttgttgttatattaatataa 73  Q
    ||||||||||||||||||||||||||||||| |||||    
T  39248446 ataagatgatgaatacgttgttgttatattattataa 39248482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 41389339 - 41389375
Alignment:
Q  37 ataagatgatgaatacgttgttgttatattaatataa 73  Q
    ||||||||||||||||||||||||||||||| |||||    
T  41389339 ataagatgatgaatacgttgttgttatattattataa 41389375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 41801091 - 41801139
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||| ||||||||||||||  ||||||| |||||    
T  41801091 ttttataagatgatgaatatgttgttgttatatttttataagatgatga 41801139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 20315650 - 20315609
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  20315650 agatgatgaatatgttgttgttatattattataagatgatga 20315609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 41306242 - 41306283
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  41306242 agatgatgaatatgttgttgttatattattataagatgatga 41306283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 21740349 - 21740389
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataaga 75  Q
    |||| |||||||||||| ||||||||||||||| |||||||    
T  21740349 ttatgagatgatgaatatgttgttgttatattattataaga 21740389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 41801124 - 41801171
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||| ||||||| ||||||| ||||||| |||||    
T  41801124 ttttataagatgatgaata-gttgttgatatattattataagatgatga 41801171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 6279 - 6348
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6279 gatgattatattgtgttgttttaaagttattagcgatgatgattacatgatgatatctatgagttgttaa 6348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 6167 - 6239
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatg 80  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6167 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatataagaagatg 6239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 60283 - 60353
Alignment:
Q  266 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  60283 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 60353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 11170 - 11102
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11170 gatgattat-ttgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 11102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 11475 - 11402
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  11475 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 11402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 275 - 335
Target Start/End: Original strand, 11027 - 11087
Alignment:
Q  275 attgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11027 attgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 11087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 10734 - 10787
Alignment:
Q  28 ttatattttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10734 ttatactttataagatgatgaatacgttgttgttatattaatataagaagatga 10787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 268 - 335
Target Start/End: Original strand, 781 - 848
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  781 tgattacattgtgttgttttaaagttattagtgatgatgattgcatgatgatatctatgagttgttaa 848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 14962 - 14895
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14962 tgattacattgtgttgttttaaagttattagtgatgatgattacatgaagatatctatgagttgttaa 14895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 21298 - 21367
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  21298 tgatgattatattgtgttgttt-aaagttattagtgatgatgattacatgatgttatctatgagttgttaa 21367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 21162 - 21210
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||| ||||||||||||||  ||||||| |||||    
T  21162 ttttataagatgatgaatatgttgttgttatatttttataagatgatga 21210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 6920 - 6988
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||    
T  6920 tgatgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaa 6988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 6842 - 6889
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||| ||||||| ||||||| ||||||| |||||    
T  6842 ttttataagatgatgaata-gttgttgatatattattataagatgatga 6889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 8695 - 8628
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8695 tgattacatagtgtttttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 8628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 8933 - 8885
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||| |||||||||||||| ||||||||||||||||| |||||||    
T  8933 ttttataaaatgatgaatacgtttttgttatattaatataaaaagatga 8885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 34089 - 34155
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  34089 gatgattatattgtgttgttttaaagttattag---tgatgattacatgatgatatctatgagttgttaa 34155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 33862 - 33940
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  33862 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 33940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 11895 - 11828
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  11895 tgattacattgtgttgttttaaaattattagtgatgatgattacatgatgaaatctatgagttgttaa 11828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 25526 - 25595
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||||||||  ||||||||||||||||||| ||||||||| |||||||||||||||||    
T  25526 gtgatgattatattgtgttgttt--aagttattagtgatgatgaatacatgatgttatctatgagttgttaa 25595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 25446 - 25491
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatg 80  Q
    ||||| ||||||||||| ||||||||||||||| ||||||| ||||    
T  25446 ttatatgatgatgaatatgttgttgttatattactataagatgatg 25491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 5006 - 5079
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||| || |||||||    
T  5006 tggtgttagtatgtgttgattatgttttcataagatgatgaatatgttgttgttatattaatacaaaaagatga 5079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 330
Target Start/End: Original strand, 5489 - 5553
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagtt 330  Q
    |||||||||||||||||| ||    |||||||||||||||||||||| |||| ||||| ||||||||    
T  5489 gtgatgattatattgtgtagtcc--aagttattagtgatgatgattatatgaagatatttatgagtt 5553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 50; Significance: 1e-19; HSPs: 5)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 79481 - 79428
Alignment:
Q  28 ttatattttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  79481 ttatattttataagatgatgaatacattgttgttatattaatataagaagatga 79428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 79535 - 79475
Alignment:
Q  7 tatggtgttagtatgtgttgattatattt-tataagatgatgaatacgttgttgttatatt 66  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  79535 tatggtgttagtatgtgttgattatatttatgtaagatgatgaatacgttgttgttatatt 79475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 289 - 335
Target Start/End: Original strand, 62821 - 62867
Alignment:
Q  289 aagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  62821 aagttattagtgatgatgattacatgatgttatctaggagttgttaa 62867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 62568 - 62621
Alignment:
Q  28 ttatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  62568 ttatattttcataagatgttgaatacgttgttgttata-taatataagaagatga 62621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 66484 - 66537
Alignment:
Q  28 ttatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  66484 ttatattttcataagatgttgaatacgttgttgttata-taatataagaagatga 66537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 19176 - 19128
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19176 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 19128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 19280 - 19232
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19280 ttttataagatgatgaatacgttgttgttagattaatataagaagatga 19232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 18942 - 18874
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||||||| |  ||||||||||||||||||||  ||||| ||||||| |||||||||    
T  18942 tgatgattatattgtgttgtttca--gttattagtgatgatgattatgtgatgttatctataagttgttaa 18874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 11109 - 11061
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11109 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 11061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 10874 - 10834
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  10874 tgattacattgtgttgttttaaagttattagtgatgatgat 10834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 11148 - 11094
Alignment:
Q  28 ttatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||| |||||||||||||||| |||||||||||||  ||||||| |||||    
T  11148 ttatattttcataagatgatgaatacattgttgttatatttttataagatgatga 11094  T

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Target: scaffold0142 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 8699 - 8767
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||  || |||||||||||||||||||||||||| |||||| ||||||||||    
T  8699 tgatgattatattgtgttgttt--aatttattagtgatgatgattacatgatgttatctacgagttgttaa 8767  T

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Target: scaffold0142; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 8445 - 8500
Alignment:
Q  12 tgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatatt 66  Q
    ||||| |||||| || ||||||||| ||||||||||||||| ||||||||||||||    
T  8445 tgttattatgtgatgtttatatttttataagatgatgaatatgttgttgttatatt 8500  T

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Target: scaffold0380 (Bit Score: 47; Significance: 8e-18; HSPs: 3)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 1009 - 955
Alignment:
Q  28 ttatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1009 ttatattttcataagatgatgaatacgttgttgttatattaatataagaagatga 955  T

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Target: scaffold0380; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 4094 - 4025
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||| ||||  |||||||||||||| |||||||||||||| |||||| ||||||||||    
T  4094 gtgatgattatattgtgtagttt--aagttattagtgattatgattacatgatgttatctaggagttgttaa 4025  T

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Target: scaffold0380; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 307
Target Start/End: Complemental strand, 42 - 1
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatga 307  Q
    |||||||||||||||||| ||||  |||||||||||||||||||    
T  42 gtgatgattatattgtgtagttt--aagttattagtgatgatga 1  T

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Target: scaffold0141 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 15281 - 15359
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  15281 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 15359  T

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Target: scaffold0141; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 15546 - 15586
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  15546 tgattacattgtgttgttttaaagttattagtgatgatgat 15586  T

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Target: scaffold0013 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 74291 - 74359
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||| |||||||||  || |||||||||| ||||||||||||||| |||||||||||||||||    
T  74291 tgatgattatatggtgttgttt--aatttattagtgaagatgattacatgatgttatctatgagttgttaa 74359  T

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Target: scaffold0013; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 74077 - 74117
Alignment:
Q  28 ttatattt-tataagatgatgaatacgttgttgttatatta 67  Q
    |||||||| |||||||||||||||| |||||||||||||||    
T  74077 ttatatttctataagatgatgaatatgttgttgttatatta 74117  T

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Target: scaffold0109 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 289 - 335
Target Start/End: Original strand, 37179 - 37225
Alignment:
Q  289 aagttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  37179 aagttattagtgatgatgattacatgatgttatctaggagttgttaa 37225  T

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Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 37161 - 37230
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttatta-gtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||| || |  ||||||||| | |||||||||||||||||| |||||||||||||||||    
T  37161 tgatgattatattgtgtggtct--aagttattatgagatgatgattacatgatgttatctatgagttgttaa 37230  T

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Target: scaffold0484 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 134 - 76
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttata 64  Q
    |||| ||||| ||||||||| ||||||||| ||||||||||||||| ||||||||||||    
T  134 tatgatgttattatgtgttgtttatatttttataagatgatgaatatgttgttgttata 76  T

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Target: scaffold1873 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1873
Description:

Target: scaffold1873; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 327
Target Start/End: Complemental strand, 753 - 691
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtga-tgatgattacatgatgatatctatga 327  Q
    |||||||||||||||||||||||  ||||||||||||| || ||||||||||||| |||| ||||    
T  753 gtgatgattatattgtgttgttt--aagttattagtgattggtgattacatgatgttatccatga 691  T

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Target: scaffold0080 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 28560 - 28523
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||||| |||||||||||||||||    
T  28560 gtgatgatgattacatgatgttatctatgagttgttaa 28523  T

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Target: scaffold0080; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 34025 - 33988
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||||| |||||||||||||||||    
T  34025 gtgatgatgattacatgatgttatctatgagttgttaa 33988  T

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Target: scaffold0299 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 335
Target Start/End: Complemental strand, 5917 - 5876
Alignment:
Q  292 ttattagtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    |||||||||||||||||||||||||||||  |||||||||||||    
T  5917 ttattagtgatgatgattacatgatgata--tatgagttgttaa 5876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 8555 - 8593
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataa 73  Q
    ||||||||||||||||| ||||||||||||||| |||||    
T  8555 ttataagatgatgaatatgttgttgttatattattataa 8593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 8621 - 8667
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||| ||||||||||||||| || |||| |||||    
T  8621 ttataagatgatgaatatgttgttgttatattattagaagatgatga 8667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 7004 - 6963
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  7004 agatgatgaatatgttgttgttatattattataagatgatga 6963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 44439 - 44480
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  44439 agatgatgaatatgttgttgttatattattataagatgatga 44480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 44504 - 44545
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  44504 agatgatgaatatgttgttgttatattattataagatgatga 44545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 9113 - 9072
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  9113 agatgatgaatatgttgttgttatattattataagatgatga 9072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 153803 - 153840
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  153803 gtgatgatgattacatgatgtcatctatgagttgttaa 153840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 362266 - 362226
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataaga 75  Q
    |||| |||||||||||| ||||||||||||||| |||||||    
T  362266 ttatgagatgatgaatatgttgttgttatattattataaga 362226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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