View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21673_high_7 (Length: 330)

Name: NF21673_high_7
Description: NF21673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21673_high_7
NF21673_high_7
[»] chr4 (75 HSPs)
chr4 (1-294)||(56505540-56505839)
chr4 (3-147)||(50679334-50679478)
chr4 (3-144)||(36096385-36096526)
chr4 (6-157)||(56506487-56506638)
chr4 (3-151)||(50678775-50678922)
chr4 (5-148)||(43051164-43051307)
chr4 (3-148)||(36095816-36095960)
chr4 (3-144)||(43050610-43050751)
chr4 (3-149)||(45830108-45830252)
chr4 (3-146)||(11529169-11529312)
chr4 (45-147)||(16555768-16555871)
chr4 (5-148)||(28196686-28196828)
chr4 (45-149)||(3930431-3930535)
chr4 (45-149)||(28196344-28196448)
chr4 (45-152)||(4239318-4239425)
chr4 (45-148)||(9023632-9023735)
chr4 (5-147)||(32703563-32703704)
chr4 (45-150)||(9380693-9380798)
chr4 (45-146)||(25161879-25161980)
chr4 (3-149)||(47219115-47219257)
chr4 (45-149)||(39744417-39744521)
chr4 (45-147)||(9380307-9380409)
chr4 (45-144)||(13198606-13198707)
chr4 (3-148)||(45828993-45829137)
chr4 (57-148)||(13198870-13198961)
chr4 (45-148)||(32703224-32703327)
chr4 (57-143)||(49178779-49178866)
chr4 (58-148)||(18077167-18077257)
chr4 (45-147)||(39086575-39086677)
chr4 (31-148)||(293155-293272)
chr4 (48-149)||(9023242-9023343)
chr4 (45-148)||(169012-169116)
chr4 (45-149)||(39744028-39744132)
chr4 (48-147)||(169394-169493)
chr4 (57-148)||(35393741-35393830)
chr4 (45-148)||(48405961-48406063)
chr4 (6-151)||(23432472-23432617)
chr4 (86-148)||(24775776-24775838)
chr4 (65-149)||(16555513-16555598)
chr4 (45-149)||(292780-292884)
chr4 (85-149)||(11241653-11241716)
chr4 (7-146)||(23433400-23433538)
chr4 (45-151)||(23539837-23539941)
chr4 (45-148)||(26207698-26207801)
chr4 (57-124)||(39415247-39415314)
chr4 (57-147)||(11241389-11241478)
chr4 (45-147)||(23540204-23540306)
chr4 (57-146)||(8488447-8488534)
chr4 (45-146)||(43292038-43292139)
chr4 (45-148)||(26207360-26207462)
chr4 (52-147)||(43292316-43292411)
chr4 (52-142)||(49178644-49178735)
chr4 (57-148)||(54508814-54508904)
chr4 (57-147)||(3930179-3930268)
chr4 (93-146)||(8181992-8182046)
chr4 (46-146)||(22681576-22681681)
chr4 (57-150)||(22681845-22681936)
chr4 (48-120)||(11530154-11530225)
chr4 (45-133)||(48406337-48406425)
chr4 (86-149)||(5205986-5206049)
chr4 (57-147)||(27304718-27304806)
chr4 (85-147)||(5206222-5206283)
chr4 (94-148)||(25225399-25225453)
chr4 (45-119)||(44468875-44468949)
chr4 (45-148)||(8488187-8488287)
chr4 (106-147)||(49178533-49178574)
chr4 (93-148)||(8182172-8182228)
chr4 (95-142)||(16555695-16555743)
chr4 (45-129)||(25162265-25162349)
chr4 (96-147)||(7603422-7603472)
chr4 (93-142)||(27304893-27304943)
chr4 (58-142)||(5206100-5206185)
chr4 (36-144)||(8181873-8181981)
chr4 (46-134)||(54509070-54509155)
chr4 (42-82)||(24775585-24775625)
[»] chr6 (40 HSPs)
chr6 (3-153)||(33829546-33829696)
chr6 (3-147)||(33828990-33829133)
chr6 (45-150)||(3403940-3404046)
chr6 (42-148)||(21031978-21032084)
chr6 (45-147)||(18242107-18242210)
chr6 (45-147)||(10087810-10087912)
chr6 (45-149)||(30388315-30388418)
chr6 (45-147)||(33974251-33974353)
chr6 (57-148)||(18241853-18241944)
chr6 (57-147)||(11656746-11656836)
chr6 (86-147)||(3403717-3403778)
chr6 (57-149)||(10039674-10039764)
chr6 (45-148)||(7654500-7654603)
chr6 (57-154)||(21032243-21032341)
chr6 (42-157)||(31598221-31598336)
chr6 (45-144)||(32733948-32734047)
chr6 (57-147)||(30388062-30388150)
chr6 (56-149)||(13579615-13579706)
chr6 (47-140)||(21032107-21032203)
chr6 (83-147)||(22684348-22684411)
chr6 (83-147)||(22754657-22754720)
chr6 (85-157)||(31598720-31598791)
chr6 (93-144)||(3825530-3825580)
chr6 (57-148)||(23250591-23250680)
chr6 (45-148)||(29074324-29074426)
chr6 (45-148)||(29079088-29079190)
chr6 (45-148)||(29106897-29106999)
chr6 (52-146)||(22755048-22755142)
chr6 (51-120)||(2762510-2762579)
chr6 (45-149)||(23250843-23250947)
chr6 (93-148)||(33655115-33655169)
chr6 (93-142)||(2762611-2762661)
chr6 (93-142)||(10039843-10039893)
chr6 (57-147)||(33971994-33972082)
chr6 (91-148)||(2354808-2354865)
chr6 (97-142)||(12714436-12714481)
chr6 (94-142)||(33972190-33972239)
chr6 (95-142)||(3403867-3403915)
chr6 (58-142)||(11656608-11656695)
chr6 (95-142)||(30388242-30388290)
[»] chr2 (73 HSPs)
chr2 (3-152)||(2639392-2639541)
chr2 (3-149)||(26841585-26841731)
chr2 (3-147)||(26842148-26842292)
chr2 (3-148)||(2638819-2638965)
chr2 (3-144)||(7591204-7591344)
chr2 (3-146)||(18296077-18296219)
chr2 (3-147)||(7591760-7591904)
chr2 (45-150)||(30190920-30191026)
chr2 (47-148)||(24832330-24832432)
chr2 (56-157)||(20347427-20347528)
chr2 (3-84)||(18296632-18296713)
chr2 (45-148)||(6171408-6171511)
chr2 (51-148)||(11883622-11883719)
chr2 (57-153)||(32673107-32673202)
chr2 (45-144)||(40469680-40469780)
chr2 (57-147)||(11883890-11883980)
chr2 (45-144)||(8851151-8851250)
chr2 (45-150)||(7664245-7664350)
chr2 (10-147)||(38490758-38490894)
chr2 (85-148)||(18296685-18296748)
chr2 (45-144)||(26692772-26692871)
chr2 (69-148)||(37720203-37720282)
chr2 (45-147)||(7664625-7664727)
chr2 (69-147)||(16910827-16910905)
chr2 (57-147)||(30191189-30191279)
chr2 (30-150)||(5379896-5380016)
chr2 (45-145)||(6325299-6325399)
chr2 (52-148)||(8851541-8851637)
chr2 (83-147)||(17850978-17851042)
chr2 (45-149)||(41790864-41790968)
chr2 (30-149)||(5378659-5378778)
chr2 (57-151)||(20347159-20347252)
chr2 (57-147)||(40469427-40469517)
chr2 (51-145)||(15321394-15321486)
chr2 (57-144)||(15920781-15920867)
chr2 (42-145)||(18055050-18055150)
chr2 (45-147)||(26737732-26737835)
chr2 (31-140)||(6324924-6325033)
chr2 (45-146)||(16911221-16911321)
chr2 (57-148)||(6495687-6495776)
chr2 (57-148)||(26737481-26737569)
chr2 (45-144)||(5793450-5793549)
chr2 (45-148)||(17851354-17851457)
chr2 (45-144)||(26692399-26692498)
chr2 (51-144)||(43495441-43495535)
chr2 (56-147)||(43495569-43495658)
chr2 (57-147)||(6171156-6171245)
chr2 (57-147)||(32672842-32672932)
chr2 (45-149)||(7979565-7979667)
chr2 (69-146)||(18750102-18750178)
chr2 (45-144)||(19141801-19141898)
chr2 (86-144)||(18055309-18055367)
chr2 (83-145)||(19141446-19141507)
chr2 (95-149)||(29230280-29230334)
chr2 (83-148)||(7979993-7980057)
chr2 (60-144)||(15321515-15321600)
chr2 (56-144)||(17345736-17345822)
chr2 (31-84)||(31641545-31641598)
chr2 (57-149)||(17345999-17346090)
chr2 (58-144)||(18055169-18055257)
chr2 (95-147)||(40221313-40221364)
chr2 (52-142)||(40221446-40221538)
chr2 (95-142)||(40469607-40469655)
chr2 (100-148)||(43495308-43495356)
chr2 (58-151)||(40221545-40221631)
chr2 (45-144)||(41790494-41790592)
chr2 (94-142)||(26737657-26737706)
chr2 (95-144)||(29343584-29343633)
chr2 (94-142)||(32673020-32673069)
chr2 (94-146)||(6495468-6495519)
chr2 (95-142)||(11883751-11883799)
chr2 (110-150)||(29230562-29230602)
chr2 (110-150)||(29343861-29343901)
[»] chr7 (72 HSPs)
chr7 (3-147)||(44599489-44599633)
chr7 (3-149)||(13863311-13863457)
chr7 (3-148)||(13863868-13864011)
chr7 (3-148)||(44600046-44600190)
chr7 (3-149)||(8643677-8643822)
chr7 (6-158)||(46816225-46816376)
chr7 (47-149)||(9412278-9412381)
chr7 (45-153)||(3687608-3687716)
chr7 (45-149)||(10533032-10533136)
chr7 (45-153)||(37889211-37889319)
chr7 (45-148)||(17156966-17157069)
chr7 (45-147)||(37888833-37888935)
chr7 (47-148)||(37972350-37972451)
chr7 (45-148)||(20419276-20419379)
chr7 (45-148)||(22740155-22740258)
chr7 (45-149)||(20418886-20418990)
chr7 (45-148)||(3205045-3205148)
chr7 (45-147)||(9035244-9035347)
chr7 (57-148)||(9412022-9412113)
chr7 (45-144)||(18863970-18864069)
chr7 (45-149)||(9034865-9034970)
chr7 (48-148)||(13744188-13744287)
chr7 (45-149)||(18864354-18864457)
chr7 (45-149)||(37971958-37972062)
chr7 (45-148)||(29292921-29293024)
chr7 (45-147)||(13741557-13741659)
chr7 (65-153)||(15567246-15567331)
chr7 (45-147)||(36527750-36527852)
chr7 (57-149)||(23686683-23686773)
chr7 (45-147)||(3204669-3204769)
chr7 (86-149)||(13772639-13772702)
chr7 (65-147)||(13772872-13772955)
chr7 (81-148)||(16198965-16199032)
chr7 (45-147)||(29293298-29293400)
chr7 (45-150)||(42418980-42419085)
chr7 (57-147)||(3687353-3687445)
chr7 (52-144)||(22740550-22740641)
chr7 (83-147)||(48359320-48359383)
chr7 (56-146)||(5735253-5735344)
chr7 (57-144)||(27096306-27096392)
chr7 (57-144)||(27181911-27181997)
chr7 (45-148)||(38826865-38826968)
chr7 (42-147)||(23686421-23686525)
chr7 (51-144)||(27096168-27096262)
chr7 (51-144)||(27182041-27182135)
chr7 (42-144)||(38191265-38191367)
chr7 (46-148)||(42418590-42418692)
chr7 (6-120)||(46815195-46815308)
chr7 (7-148)||(30857818-30857959)
chr7 (86-151)||(33628653-33628718)
chr7 (57-149)||(6908211-6908302)
chr7 (57-120)||(15567019-15567079)
chr7 (57-145)||(29291808-29291896)
chr7 (45-149)||(48359610-48359713)
chr7 (85-147)||(35079960-35080021)
chr7 (84-147)||(5349724-5349784)
chr7 (93-146)||(8953889-8953941)
chr7 (86-146)||(18925315-18925373)
chr7 (51-147)||(29292001-29292095)
chr7 (83-144)||(36527387-36527447)
chr7 (95-147)||(18925062-18925114)
chr7 (42-147)||(27096047-27096149)
chr7 (42-147)||(27182154-27182256)
chr7 (93-143)||(18925229-18925280)
chr7 (57-113)||(5349497-5349550)
chr7 (94-144)||(6908485-6908534)
chr7 (107-148)||(34235737-34235778)
chr7 (95-143)||(38191387-38191435)
chr7 (93-146)||(39983700-39983753)
chr7 (65-145)||(33628397-33628475)
chr7 (93-145)||(34235978-34236030)
chr7 (85-129)||(35080215-35080259)
[»] chr8 (69 HSPs)
chr8 (3-149)||(13026633-13026779)
chr8 (3-148)||(9823271-9823416)
chr8 (3-147)||(39723958-39724102)
chr8 (3-147)||(22851390-22851534)
chr8 (3-144)||(13027192-13027332)
chr8 (6-151)||(13937303-13937447)
chr8 (5-124)||(39723425-39723544)
chr8 (6-147)||(3307338-3307479)
chr8 (3-147)||(9822748-9822892)
chr8 (6-148)||(6092776-6092915)
chr8 (13-148)||(13936722-13936853)
chr8 (45-147)||(41662354-41662457)
chr8 (8-149)||(15042143-15042283)
chr8 (47-145)||(765736-765835)
chr8 (47-148)||(12281123-12281225)
chr8 (45-147)||(15156136-15156239)
chr8 (45-147)||(43245871-43245974)
chr8 (57-149)||(15155881-15155973)
chr8 (45-149)||(37396706-37396810)
chr8 (56-147)||(37752084-37752176)
chr8 (45-163)||(16928926-16929043)
chr8 (46-148)||(41662520-41662622)
chr8 (57-148)||(43246139-43246231)
chr8 (45-148)||(17431286-17431389)
chr8 (57-147)||(12281390-12281480)
chr8 (57-147)||(16929207-16929296)
chr8 (45-147)||(24473343-24473445)
chr8 (57-147)||(37752381-37752470)
chr8 (3-84)||(22851896-22851976)
chr8 (45-149)||(6199048-6199152)
chr8 (45-153)||(24473720-24473828)
chr8 (45-149)||(34498507-34498611)
chr8 (82-145)||(25438794-25438857)
chr8 (7-145)||(15442765-15442903)
chr8 (45-147)||(37397097-37397199)
chr8 (43-147)||(3463894-3463999)
chr8 (45-149)||(6198656-6198760)
chr8 (57-148)||(18020053-18020141)
chr8 (45-148)||(20861590-20861693)
chr8 (57-147)||(34313765-34313852)
chr8 (65-144)||(34498125-34498204)
chr8 (57-148)||(41662106-41662197)
chr8 (85-147)||(23123338-23123400)
chr8 (45-124)||(74936-75015)
chr8 (45-107)||(37752154-37752217)
chr8 (69-147)||(9623502-9623580)
chr8 (83-149)||(15444637-15444703)
chr8 (57-145)||(74688-74773)
chr8 (57-150)||(33747981-33748073)
chr8 (57-144)||(9465838-9465923)
chr8 (90-149)||(2856524-2856583)
chr8 (47-142)||(18019915-18020013)
chr8 (69-144)||(25439102-25439176)
chr8 (93-143)||(43162539-43162588)
chr8 (93-145)||(23123517-23123567)
chr8 (57-147)||(43162234-43162325)
chr8 (97-140)||(7127660-7127702)
chr8 (58-148)||(9465606-9465693)
chr8 (65-148)||(11007800-11007883)
chr8 (95-146)||(22851958-22852009)
chr8 (45-144)||(33727057-33727156)
chr8 (57-155)||(3463634-3463729)
chr8 (45-147)||(16169174-16169275)
chr8 (95-149)||(22786838-22786892)
chr8 (57-113)||(765999-766053)
chr8 (57-142)||(7127789-7127877)
chr8 (94-142)||(15156062-15156111)
chr8 (107-155)||(767720-767767)
chr8 (95-142)||(37752242-37752290)
[»] scaffold0328 (2 HSPs)
scaffold0328 (3-147)||(6705-6849)
scaffold0328 (3-147)||(6152-6295)
[»] chr5 (61 HSPs)
chr5 (3-153)||(18817521-18817671)
chr5 (6-148)||(11350807-11350948)
chr5 (3-149)||(18816950-18817096)
chr5 (3-149)||(11351339-11351483)
chr5 (45-147)||(18433015-18433118)
chr5 (45-149)||(25115755-25115860)
chr5 (45-149)||(25174847-25174952)
chr5 (45-148)||(26020449-26020553)
chr5 (45-149)||(12498565-12498669)
chr5 (57-149)||(22428932-22429021)
chr5 (45-149)||(12498880-12498984)
chr5 (57-149)||(25175115-25175207)
chr5 (45-149)||(26571116-26571220)
chr5 (57-148)||(18433281-18433371)
chr5 (45-148)||(19514915-19515018)
chr5 (45-146)||(22729392-22729492)
chr5 (45-144)||(34576870-34576968)
chr5 (5-147)||(3888239-3888379)
chr5 (45-144)||(21207229-21207328)
chr5 (57-147)||(34577129-34577217)
chr5 (45-149)||(26570727-26570831)
chr5 (45-149)||(43464144-43464247)
chr5 (45-144)||(3888614-3888713)
chr5 (45-147)||(19514525-19514628)
chr5 (57-149)||(25116023-25116117)
chr5 (68-149)||(5187805-5187886)
chr5 (52-144)||(2817152-2817244)
chr5 (85-149)||(22429188-22429251)
chr5 (69-153)||(37610196-37610279)
chr5 (69-153)||(37780314-37780397)
chr5 (56-149)||(16466708-16466798)
chr5 (83-150)||(31569904-31569970)
chr5 (45-148)||(34147462-34147565)
chr5 (45-148)||(42919304-42919406)
chr5 (45-144)||(43463759-43463857)
chr5 (57-147)||(9665792-9665879)
chr5 (45-119)||(11316926-11317000)
chr5 (95-141)||(16726084-16726130)
chr5 (83-160)||(10098931-10099007)
chr5 (85-144)||(9665560-9665617)
chr5 (93-149)||(33324838-33324894)
chr5 (45-148)||(34147140-34147241)
chr5 (45-148)||(25940520-25940623)
chr5 (93-148)||(41383167-41383221)
chr5 (45-147)||(22729008-22729108)
chr5 (56-147)||(23011079-23011170)
chr5 (69-147)||(37780718-37780796)
chr5 (69-152)||(10098514-10098597)
chr5 (49-144)||(11316717-11316812)
chr5 (101-147)||(12441320-12441364)
chr5 (51-146)||(25940972-25941067)
chr5 (46-149)||(41072167-41072269)
chr5 (94-149)||(41382891-41382945)
chr5 (64-144)||(9869563-9869639)
chr5 (47-144)||(9869688-9869790)
chr5 (94-142)||(25115885-25115934)
chr5 (94-142)||(25174977-25175026)
chr5 (96-144)||(34576991-34577040)
chr5 (69-145)||(2817551-2817626)
chr5 (95-142)||(18433143-18433191)
chr5 (97-144)||(23011261-23011309)
[»] chr1 (80 HSPs)
chr1 (3-153)||(49284403-49284552)
chr1 (3-147)||(6002237-6002381)
chr1 (3-126)||(49284965-49285088)
chr1 (3-145)||(6002803-6002946)
chr1 (45-148)||(47955305-47955409)
chr1 (45-159)||(28633708-28633822)
chr1 (39-157)||(31847885-31848003)
chr1 (45-148)||(39691952-39692055)
chr1 (45-147)||(9347126-9347228)
chr1 (45-147)||(48105068-48105170)
chr1 (45-144)||(22149653-22149750)
chr1 (45-149)||(32162995-32163099)
chr1 (3-75)||(48191295-48191366)
chr1 (85-148)||(8108985-8109048)
chr1 (45-147)||(27172116-27172217)
chr1 (45-147)||(50615573-50615674)
chr1 (45-147)||(50623401-50623502)
chr1 (45-145)||(17518555-17518653)
chr1 (3-84)||(48190805-48190886)
chr1 (45-153)||(9347503-9347610)
chr1 (45-149)||(26815071-26815175)
chr1 (45-149)||(44911023-44911127)
chr1 (57-149)||(47955572-47955664)
chr1 (45-145)||(50526424-50526524)
chr1 (45-148)||(20480167-20480269)
chr1 (45-156)||(28634109-28634220)
chr1 (45-147)||(41082909-41083011)
chr1 (45-144)||(46823846-46823945)
chr1 (45-144)||(48104681-48104780)
chr1 (45-144)||(50430033-50430132)
chr1 (45-147)||(13918446-13918548)
chr1 (45-147)||(26814694-26814796)
chr1 (85-147)||(48190771-48190833)
chr1 (45-150)||(999477-999581)
chr1 (86-150)||(48191348-48191412)
chr1 (57-151)||(31848158-31848250)
chr1 (45-144)||(42611188-42611287)
chr1 (63-148)||(13589628-13589713)
chr1 (39-149)||(19008696-19008806)
chr1 (52-144)||(1176839-1176932)
chr1 (57-150)||(8108718-8108810)
chr1 (57-154)||(22149396-22149490)
chr1 (69-153)||(6703870-6703954)
chr1 (57-149)||(17518301-17518392)
chr1 (48-148)||(46824233-46824333)
chr1 (45-147)||(20371304-20371406)
chr1 (45-148)||(27172494-27172596)
chr1 (45-147)||(21687025-21687127)
chr1 (45-147)||(49317752-49317853)
chr1 (45-147)||(49318118-49318219)
chr1 (83-148)||(4692423-4692488)
chr1 (45-149)||(6703458-6703562)
chr1 (83-147)||(20480602-20480665)
chr1 (83-146)||(13918857-13918920)
chr1 (65-120)||(24671283-24671338)
chr1 (93-152)||(41083211-41083269)
chr1 (69-144)||(999115-999189)
chr1 (94-149)||(39690792-39690847)
chr1 (45-144)||(42611566-42611665)
chr1 (69-148)||(50429655-50429734)
chr1 (7-148)||(33085670-33085809)
chr1 (98-148)||(50615239-50615289)
chr1 (98-148)||(50623067-50623117)
chr1 (93-154)||(1177018-1177079)
chr1 (56-147)||(1176717-1176805)
chr1 (69-148)||(20371039-20371116)
chr1 (83-147)||(21687457-21687520)
chr1 (46-144)||(31848019-31848119)
chr1 (45-149)||(44911389-44911493)
chr1 (85-148)||(19007734-19007796)
chr1 (52-146)||(46056904-46056991)
chr1 (91-146)||(47498493-47498547)
chr1 (93-148)||(48313792-48313847)
chr1 (95-144)||(22149580-22149630)
chr1 (94-142)||(8108899-8108948)
chr1 (94-142)||(17518481-17518530)
chr1 (83-147)||(47498301-47498363)
chr1 (97-150)||(50949569-50949622)
chr1 (83-119)||(32162757-32162793)
chr1 (83-147)||(49318433-49318496)
[»] chr3 (69 HSPs)
chr3 (3-149)||(1928344-1928489)
chr3 (45-147)||(20968971-20969073)
chr3 (42-148)||(47871070-47871176)
chr3 (45-150)||(48159894-48159999)
chr3 (5-147)||(8314013-8314155)
chr3 (45-147)||(10293608-10293711)
chr3 (57-147)||(18875155-18875245)
chr3 (46-147)||(10348752-10348853)
chr3 (3-147)||(28702278-28702417)
chr3 (57-148)||(20968717-20968808)
chr3 (45-144)||(27238852-27238951)
chr3 (45-148)||(40848520-40848622)
chr3 (45-148)||(53687887-53687990)
chr3 (57-147)||(10293873-10293963)
chr3 (45-147)||(42673248-42673349)
chr3 (45-147)||(48160285-48160387)
chr3 (46-147)||(24485413-24485513)
chr3 (45-150)||(40848913-40849018)
chr3 (45-149)||(27238463-27238567)
chr3 (31-147)||(42672978-42673093)
chr3 (45-150)||(9026733-9026835)
chr3 (57-147)||(17372298-17372387)
chr3 (45-147)||(47666287-47666389)
chr3 (45-146)||(22429159-22429260)
chr3 (3-75)||(1927815-1927885)
chr3 (85-152)||(45060863-45060930)
chr3 (85-147)||(1927772-1927834)
chr3 (52-144)||(17372433-17372525)
chr3 (85-149)||(21895655-21895720)
chr3 (83-147)||(3353128-3353191)
chr3 (94-150)||(18874879-18874935)
chr3 (69-153)||(26007176-26007259)
chr3 (45-149)||(26007571-26007675)
chr3 (57-150)||(47870820-47870910)
chr3 (18-149)||(10771502-10771629)
chr3 (57-147)||(13657445-13657536)
chr3 (56-147)||(21896474-21896564)
chr3 (57-147)||(9026998-9027086)
chr3 (45-147)||(53688255-53688356)
chr3 (69-150)||(3353527-3353607)
chr3 (52-144)||(13657580-13657673)
chr3 (84-149)||(42455788-42455853)
chr3 (83-148)||(53766569-53766634)
chr3 (91-147)||(3644781-3644837)
chr3 (46-143)||(4947263-4947362)
chr3 (7-75)||(21895701-21895769)
chr3 (45-145)||(22429548-22429647)
chr3 (45-148)||(36180555-36180656)
chr3 (94-149)||(1101182-1101237)
chr3 (94-149)||(8315083-8315137)
chr3 (86-149)||(14015957-14016019)
chr3 (57-140)||(26540833-26540915)
chr3 (69-144)||(53766166-53766241)
chr3 (45-119)||(24485049-24485123)
chr3 (83-149)||(36180980-36181046)
chr3 (57-147)||(42627511-42627599)
chr3 (95-149)||(47665909-47665963)
chr3 (47-144)||(14015824-14015923)
chr3 (99-147)||(45060596-45060644)
chr3 (94-145)||(1100917-1100968)
chr3 (57-146)||(17372560-17372645)
chr3 (69-115)||(42456171-42456217)
chr3 (45-147)||(44008353-44008454)
chr3 (45-146)||(10348480-10348581)
chr3 (106-147)||(13657735-13657776)
chr3 (94-142)||(20968897-20968946)
chr3 (93-144)||(1101090-1101141)
chr3 (96-148)||(17441066-17441118)
chr3 (95-142)||(18875017-18875065)
[»] scaffold0110 (2 HSPs)
scaffold0110 (45-149)||(45758-45862)
scaffold0110 (57-148)||(45536-45626)
[»] scaffold0802 (3 HSPs)
scaffold0802 (45-147)||(1371-1474)
scaffold0802 (57-147)||(1118-1208)
scaffold0802 (94-142)||(1297-1346)
[»] scaffold0192 (2 HSPs)
scaffold0192 (51-148)||(25327-25424)
scaffold0192 (95-142)||(25247-25295)
[»] scaffold0319 (3 HSPs)
scaffold0319 (45-147)||(6648-6750)
scaffold0319 (57-148)||(6393-6485)
scaffold0319 (95-142)||(6575-6623)
[»] scaffold0001 (5 HSPs)
scaffold0001 (58-147)||(438930-439019)
scaffold0001 (57-149)||(439165-439255)
scaffold0001 (42-148)||(183611-183717)
scaffold0001 (57-144)||(183367-183453)
scaffold0001 (51-144)||(183497-183592)
[»] scaffold0535 (1 HSPs)
scaffold0535 (21-148)||(10011-10138)
[»] scaffold0017 (2 HSPs)
scaffold0017 (45-147)||(185226-185328)
scaffold0017 (45-146)||(184840-184941)
[»] scaffold0460 (2 HSPs)
scaffold0460 (45-148)||(329-432)
scaffold0460 (69-147)||(739-816)
[»] scaffold0176 (2 HSPs)
scaffold0176 (83-154)||(20033-20104)
scaffold0176 (69-158)||(19610-19698)
[»] scaffold0041 (2 HSPs)
scaffold0041 (45-148)||(38647-38750)
scaffold0041 (45-114)||(38284-38353)
[»] scaffold0002 (1 HSPs)
scaffold0002 (45-147)||(411923-412024)
[»] scaffold0029 (2 HSPs)
scaffold0029 (45-148)||(9904-10008)
scaffold0029 (85-149)||(10311-10373)
[»] scaffold0015 (2 HSPs)
scaffold0015 (57-152)||(17119-17214)
scaffold0015 (45-147)||(16853-16956)
[»] scaffold0069 (2 HSPs)
scaffold0069 (45-147)||(50458-50560)
scaffold0069 (69-148)||(50074-50151)
[»] scaffold0009 (1 HSPs)
scaffold0009 (57-153)||(205681-205774)
[»] scaffold0376 (2 HSPs)
scaffold0376 (91-148)||(7454-7510)
scaffold0376 (93-147)||(7600-7653)
[»] scaffold1221 (2 HSPs)
scaffold1221 (91-147)||(1511-1566)
scaffold1221 (57-144)||(1747-1834)
[»] scaffold0598 (2 HSPs)
scaffold0598 (94-146)||(6877-6927)
scaffold0598 (95-150)||(6604-6659)
[»] scaffold0035 (2 HSPs)
scaffold0035 (42-146)||(72967-73070)
scaffold0035 (57-144)||(73089-73177)


Alignment Details
Target: chr4 (Bit Score: 265; Significance: 1e-148; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 56505839 - 56505540
Alignment:
Q  1 atatcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56505839 atatcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgca 56505740  T
Q  101 aaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatattatatatgtatgatgctcaaccacaccaaccaaccactcttattgttc 200  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56505739 aaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcctatattatatatgtatgatgctcaaccacaccaaccaaccactcttattgttc 56505640  T
Q  201 actgatttca------ctttttgaaggggattgcaactaaaatattaatattaaactgttaacatgtgtggaatgagatgatagaacacctcactgactg 294  Q
    ||||||||||      |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  56505639 actgatttcactttcactttttgaaggggattacaactaaaatattaatattaaactgttaacatgtgtggaatgagatgatagaacacctcactaactg 56505540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 3 - 147
Target Start/End: Original strand, 50679334 - 50679478
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  50679334 atcagacacatcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaa 50679433  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||| ||||||||||||||||| ||| ||||||||||||||||||    
T  50679434 atcgtacaattggcaaaagataggggtgaaaagtgcaattaagcc 50679478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 3 - 144
Target Start/End: Original strand, 36096385 - 36096526
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  36096385 atcagacacatcatcactaaaacacatggggggcctccaaatcagaaaggggaaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaa 36096484  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||||||||| ||| |||||||||||||||    
T  36096485 atcgcacaattggcaaaagataggggtgaaaagtgcaattaa 36096526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 6 - 157
Target Start/End: Original strand, 56506487 - 56506638
Alignment:
Q  6 agacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatc 105  Q
    ||||||||||||||||||||||| | |||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||| |||| || ||||||     
T  56506487 agacacatcatcactaaaacacacgaggggccttcaaatcagaaagggggaaaatgatggggtgcaaaatcgctcaattaaaaacatggagtacaaaatt 56506586  T
Q  106 gcacaattggcaaaagatatgggggaaaagtgcaattaagcctatattatat 157  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||| |||||    
T  56506587 gcacaattggcaaaagataagggtgaaaagtgcaattaagcctataatatat 56506638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 3 - 151
Target Start/End: Complemental strand, 50678922 - 50678775
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||||||||||||||||||||   |||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  50678922 atcagacacatcatcactaaatt-catggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaa 50678824  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctata 151  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  50678823 atcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctata 50678775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 43051164 - 43051307
Alignment:
Q  5 cagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaat 104  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||| ||||  ||||||| ||||||||||||||    
T  43051164 cagacacatcatcactaaaacacatggggggcctccaaatcagaaagagggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaat 43051263  T
Q  105 cgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    | |||||||||||||||||| ||| ||||| |||||||||||||    
T  43051264 cacacaattggcaaaagataggggtgaaaaatgcaattaagcct 43051307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 36095960 - 36095816
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||||||||||||||||||||| ||||||||||||| |||| |||||||||| |||||||| ||||||||||| ||||  ||||||| ||||||||||||    
T  36095960 atcagacacatcatcactaaaatacatggggggcctccaaatcagaaagggg-aaaaagatagggtgcaaaatcgctcgtttaaaaacatggggtgcaaa 36095862  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    |||||||||||||||||||||| ||| ||||| |||||||||||||    
T  36095861 atcgcacaattggcaaaagataggggtgaaaaatgcaattaagcct 36095816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 43050751 - 43050610
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||| |||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||  |||  ||||||| ||||||||||||    
T  43050751 atcaaacacatcatcactaaaacacatggagggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcactcgtttaaaaacatggggtgcaaa 43050652  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||||||||| |||||||| ||  |||||||||||||||    
T  43050651 atcgcacaattggtaaaagatagggatgaaaagtgcaattaa 43050610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 45830108 - 45830252
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||||||||||||||||||||||| ||||||||| | |||| |||||||||| |||||||||||||||||||| ||||  ||||||| |||||||| |||    
T  45830108 atcagacacatcatcactaaaacatatggggggc-tccaaatcagaaagggg-aaaaagatggggtgcaaaatcgctcttttaaaaacatggggtgtaaa 45830205  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    |||||||||||| ||||||||| ||| ||||||||| ||||||||||    
T  45830206 atcgcacaattgacaaaagataggggtgaaaagtgcgattaagccta 45830252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 146
Target Start/End: Complemental strand, 11529312 - 11529169
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||||||||||||||||||||||| ||| |||| |||||||| | |||| ||||||| |||| |||||||||| || | |||||||| ||||||||||||    
T  11529312 atcagacacatcatcactaaaacatatgaggggacttcaaactaaaaagagggaaaatgatgtggtgcaaaatcgcacgattaaaaacatggggtgcaaa 11529213  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 146  Q
    ||| ||||||||||||||| || || ||||||||||||||||||    
T  11529212 atcacacaattggcaaaagttagggaggaaaagtgcaattaagc 11529169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 16555768 - 16555871
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  16555768 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagataagggggaaaagtgcaatta 16555867  T
Q  144 agcc 147  Q
    ||||    
T  16555868 agcc 16555871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 28196686 - 28196828
Alignment:
Q  5 cagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaat 104  Q
    |||||||||||||||||||   |||||||  || | ||| |||||||||||||||  || ||| ||||||| ||||  |||||| |||||||||||||||    
T  28196686 cagacacatcatcactaaatgtcatgggga-ccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaat 28196784  T
Q  105 cgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    |||||||||||||||  ||| |||||||||||||||||||||||    
T  28196785 cgcacaattggcaaactataggggggaaaagtgcaattaagcct 28196828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 45 - 149
Target Start/End: Original strand, 3930431 - 3930535
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||||||||||||||||||| ||| ||  ||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  3930431 cagaaagggggcaaaaagatggggtgcaaaatcgctaaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagata-gggggaaaagtgcaatta 3930529  T
Q  144 agccta 149  Q
    ||||||    
T  3930530 agccta 3930535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 45 - 149
Target Start/End: Complemental strand, 28196448 - 28196344
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  28196448 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaattataggggggaaaagtgcaattaa 28196349  T
Q  145 gccta 149  Q
    |||||    
T  28196348 gccta 28196344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 152
Target Start/End: Original strand, 4239318 - 4239425
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||| || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||| ||||||||||||||    
T  4239318 cagaaagggggaaaaatatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaa 4239417  T
Q  145 gcctatat 152  Q
    ||| ||||    
T  4239418 gccaatat 4239425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 9023632 - 9023735
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||| |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  9023632 cagaaagggggaaaactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 9023731  T
Q  145 gcct 148  Q
    ||||    
T  9023732 gcct 9023735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 32703563 - 32703704
Alignment:
Q  5 cagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaat 104  Q
    |||||||||||||||||||   |||||||  || | ||| |||||| ||||||||  || ||| ||||||| ||||  |||||| |||||||||||||||    
T  32703563 cagacacatcatcactaaatgtcatgggga-ccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaat 32703661  T
Q  105 cgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||||||||||||  ||| ||||||||||||||||||||||    
T  32703662 cgcacaattggcaaactataggggggaaaagtgcaattaagcc 32703704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 45 - 150
Target Start/End: Original strand, 9380693 - 9380798
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||| ||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  9380693 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggagtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 9380792  T
Q  145 gcctat 150  Q
    ||||||    
T  9380793 gcctat 9380798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 25161980 - 25161879
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  25161980 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 25161881  T
Q  145 gc 146  Q
    ||    
T  25161880 gc 25161879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 47219115 - 47219257
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||| |||||||||||||||||||||||| |||||| |||| ||||    ||||||||||||||||| ||||| |||   ||||||| ||  ||||||||    
T  47219115 atcaaacacatcatcactaaaacacatggagggcctccaaatcaga----gggaaaaagatggggtgtaaaatcgctggtttaaaaacataaggtgcaaa 47219210  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    ||||||||||| ||||||||||  || ||||| ||||||||| ||||    
T  47219211 atcgcacaattagcaaaagatagaggtgaaaaatgcaattaaaccta 47219257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 45 - 149
Target Start/End: Original strand, 39744417 - 39744521
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  39744417 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 39744516  T
Q  145 gccta 149  Q
    |||||    
T  39744517 gccta 39744521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 9380409 - 9380307
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||| ||||||||||||||||||||||  ||| |||||||||||||||||||    
T  9380409 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 9380310  T
Q  145 gcc 147  Q
    |||    
T  9380309 gcc 9380307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 13198707 - 13198606
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaat-atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatt 142  Q
    ||||||||||| |||||||||||||||||||| ||||||  |||||  | ||||||||||||||||||||||||||||||||  || |||||||||||||    
T  13198707 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataaaggagaaaagtgcaatt 13198608  T
Q  143 aa 144  Q
    ||    
T  13198607 aa 13198606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 45829137 - 45828993
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||||||||||||||||||||||| || | || | |||||| ||||| | |||||||||||||| |||||||| |||   |||| || || |||| ||||    
T  45829137 atcagacacatcatcactaaaacatatagagg-cattcaaatcagaacgagggaaaaagatgggatgcaaaatcgcttgtttaataacattgggtacaaa 45829039  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||||||||| |||||||| | | ||||||| |||||||||||    
T  45829038 atcgcacaattggtaaaagataggagtgaaaagtacaattaagcct 45828993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 57 - 148
Target Start/End: Original strand, 13198870 - 13198961
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||| ||||||||||| ||||||   |||| | |||||||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  13198870 aaaagatagggtgcaaaatcgctcaaaacaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 13198961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 32703327 - 32703224
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| || |||||||| ||||||||||||||||||  ||| |||||||||||||||||||    
T  32703327 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactacggggtgcataatcgcacaattggcaaattataggggggaaaagtgcaattaa 32703228  T
Q  145 gcct 148  Q
    ||||    
T  32703227 gcct 32703224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 57 - 143
Target Start/End: Original strand, 49178779 - 49178866
Alignment:
Q  57 aaaagatggggtgcaaaatagctc-aattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||||||||||| |||| ||  ||||| | |||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  49178779 aaaagatggggtgcaaaatcgctccaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggagaaaagtgcaatta 49178866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 18077167 - 18077257
Alignment:
Q  58 aaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||||| |||||||| ||||||  ||||| | ||||||||||||||||||||| |||||| ||| ||| |||||||||||||||||||    
T  18077167 aaagatgggatgcaaaatcgctcaacaaaaaagagggggtgcaaaatcgcacaattagcaaaaaataggggtgaaaagtgcaattaagcct 18077257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 39086575 - 39086677
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| |||  |||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  39086575 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactattaggtgcaaaatcgcacaattggcaaactatatgggagaaaagtgcaattaa 39086674  T
Q  145 gcc 147  Q
    |||    
T  39086675 gcc 39086677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 293155 - 293272
Alignment:
Q  31 gggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatggggg 130  Q
    ||||||| | ||| |||||||||||||||  ||  || ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| ||||     
T  293155 gggggccataaaatcagaaagggggaaaactatacggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggga 293254  T
Q  131 aaaagtgcaattaagcct 148  Q
    ||||||||||||||||||    
T  293255 aaaagtgcaattaagcct 293272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 149
Target Start/End: Complemental strand, 9023343 - 9023242
Alignment:
Q  48 aaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||||||||  || ||| |||||||  |||  |||||| ||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||    
T  9023343 aaagggggaaaactatagggggcaaaatcactcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggagaaaagtgcaattaagcc 9023244  T
Q  148 ta 149  Q
    ||    
T  9023243 ta 9023242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 169116 - 169012
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggg-gaaaagtgcaatta 143  Q
    |||||||||| ||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||| ||||||||||||||    
T  169116 cagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaattatggggtgcaaaatcgcacaattggcaaactatagggggagaaaagtgcaatta 169017  T
Q  144 agcct 148  Q
    |||||    
T  169016 agcct 169012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 45 - 149
Target Start/End: Complemental strand, 39744132 - 39744028
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||| |||||||||||||||| |||  ||| |||| ||||||||||||||    
T  39744132 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaattatggggtggaaaatcgcacaattggtaaactatagggggaaaaagtgcaattaa 39744033  T
Q  145 gccta 149  Q
    |||||    
T  39744032 gccta 39744028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 169394 - 169493
Alignment:
Q  48 aaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| ||||||||| ||||||||||||    
T  169394 aaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaagcc 169493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 148
Target Start/End: Original strand, 35393741 - 35393830
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||||||||||||||| |||| || ||||| | |||||||||| |||||||||| |||||||||| ||| |||||||||||||||||||    
T  35393741 aaaagatggggtgcaaaatcgctc-ataaaaaagagggggtgcaaattcgcacaattagcaaaagata-gggtgaaaagtgcaattaagcct 35393830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 48406063 - 48405961
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||| ||| ||||||||||  ||| |||||||||||||||||||    
T  48406063 cagaaagggggaaaattatagggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcataattggcaaactata-gggggaaaagtgcaattaa 48405965  T
Q  145 gcct 148  Q
    ||||    
T  48405964 gcct 48405961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 151
Target Start/End: Complemental strand, 23432617 - 23432472
Alignment:
Q  6 agacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatc 105  Q
    ||||| |||| |||| ||||| ||| |||| | ||||| | ||||||||| ||||||  ||||||||||| | ||| ||||||| |||||||||| |||     
T  23432617 agacatatcaacactgaaacatatgaggggtcatcaaatc-gaaagggggcaaaagagagggtgcaaaattgttcatttaaaaagatggggtgcagaatt 23432519  T
Q  106 gcacaattggc-aaaagatatgggggaaaagtgcaattaagcctata 151  Q
    ||||||||| | |||| ||| |||| |||||||||||||||||||||    
T  23432518 gcacaattgacaaaaaaatagggggcaaaagtgcaattaagcctata 23432472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 86 - 148
Target Start/End: Original strand, 24775776 - 24775838
Alignment:
Q  86 aaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    |||| |||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||    
T  24775776 aaaagatggggtgcaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaagcct 24775838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 65 - 149
Target Start/End: Complemental strand, 16555598 - 16555513
Alignment:
Q  65 gggtgcaaaatagctcaattaaaaat-atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    ||||||||||| ||||||  |||||  | |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  16555598 gggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagccta 16555513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 149
Target Start/End: Complemental strand, 292884 - 292780
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||   | ||| ||||||| ||||  |||||| |||| | |||||||| ||||||||||||||  ||| |||||||||||||||||||    
T  292884 cagaaagggggaaaactgtagggggcaaaatcgctcgtttaaaactatgagatgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaa 292785  T
Q  145 gccta 149  Q
    |||||    
T  292784 gccta 292780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 149
Target Start/End: Original strand, 11241653 - 11241716
Alignment:
Q  85 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||    
T  11241653 aaaaagatggggtgcaaaatcccacaattggcaaaagata-gggggaaaagtacaattaagccta 11241716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 146
Target Start/End: Original strand, 23433400 - 23433538
Alignment:
Q  7 gacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcg 106  Q
    ||||||||| |||| ||| ||||  |||||| ||||| |||||||||| ||||| |  ||||||||||| ||||| ||||||| |  || |||| |||||    
T  23433400 gacacatcagcactgaaatacataaggggccatcaaatcagaaaggggcaaaaa-agagggtgcaaaatcgctcacttaaaaagaaaggatgcacaatcg 23433498  T
Q  107 cacaattggcaaaagatatgggggaaaagtgcaattaagc 146  Q
    |||||||| ||||||||| | || | ||||||||||||||    
T  23433499 cacaattgacaaaagataagaggcagaagtgcaattaagc 23433538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 151
Target Start/End: Complemental strand, 23539941 - 23539837
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||| ||||||| || ||| ||||||| | ||  || ||| ||||||||||||||||||||||||||||||   ||| |||| |||||||||||||    
T  23539941 cagaaaggaggaaaaatatagggggcaaaatcgttcgttttaaactatggggtgcaaaatcgcacaattggcaaa--ctatagggggaaagtgcaattaa 23539844  T
Q  145 gcctata 151  Q
    |||||||    
T  23539843 gcctata 23539837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 26207698 - 26207801
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||| ||||||  || ||| ||||||| ||||  || |||  |||||||||||||||||||||||||||||  ||| ||||||||| |||||||||    
T  26207698 cagaaaggaggaaaactatagggggcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaa 26207797  T
Q  145 gcct 148  Q
    ||||    
T  26207798 gcct 26207801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 57 - 124
Target Start/End: Complemental strand, 39415314 - 39415247
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagata 124  Q
    ||||||||||||||||||| |||||| |||||| |  |||||||||||||||||||| ||||||||||    
T  39415314 aaaagatggggtgcaaaatcgctcaaataaaaagagagggtgcaaaatcgcacaattagcaaaagata 39415247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 11241478 - 11241389
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||| ||||||||||| ||||||  ||||| | ||| |||||||||||||||||  ||||||||| || |||||||||||||||||||    
T  11241478 aaaagatagggtgcaaaatcgctcaaa-aaaaagaggggatgcaaaatcgcacaattaacaaaagataaggaggaaaagtgcaattaagcc 11241389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 23540204 - 23540306
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| | ||||| ||||  |||||| ||| ||||||||||||||||||||| ||||  ||| ||| |||||||||||||||    
T  23540204 cagaaagggggaaaactatagggggtaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattgacaaactataggggtgaaaagtgcaattaa 23540303  T
Q  145 gcc 147  Q
    |||    
T  23540304 gcc 23540306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 57 - 146
Target Start/End: Original strand, 8488447 - 8488534
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 146  Q
    ||||||||||||||||||| ||||||  ||||| | ||||||||||||||||||||| | ||||||||  || |||||||||||||||||    
T  8488447 aaaagatggggtgcaaaatcgctcaaa-aaaaagagggggtgcaaaatcgcacaattagaaaaagata-aggcgaaaagtgcaattaagc 8488534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 43292139 - 43292038
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||| ||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||  ||||||||||||||    
T  43292139 cagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggaaaaaagtgcaattaa 43292040  T
Q  145 gc 146  Q
    ||    
T  43292039 gc 43292038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 26207462 - 26207360
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||| ||||||  || ||| ||||||| ||||  || |||  |||||||||||||||||||||||||||||  ||| ||||| |||||||||||||    
T  26207462 cagaaaggaggaaaactatagggggcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaactata-ggggggaaagtgcaattaa 26207364  T
Q  145 gcct 148  Q
    ||||    
T  26207363 gcct 26207360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 147
Target Start/End: Original strand, 43292316 - 43292411
Alignment:
Q  52 ggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||||  || ||| ||||||| ||||  |||||| |||||| |||||||||||||||||||||||  | | ||||||||| ||||||||||||    
T  43292316 ggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactaaaggggggaaaaatgcaattaagcc 43292411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 142
Target Start/End: Complemental strand, 49178735 - 49178644
Alignment:
Q  52 ggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 142  Q
    |||| ||||||| ||||||||||| ||||||  ||| |   |||||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  49178735 ggggcaaaagattgggtgcaaaattgctcaaaaaaagaagaggggtgcaaaatcgcacaattggcaaaaagatagggggcaaaagtgcaatt 49178644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 148
Target Start/End: Complemental strand, 54508904 - 54508814
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||| ||||||||||| ||||||  ||||| |  |||||||||||| |||||||||||||||||  | || ||||||||||||||||||    
T  54508904 aaaagatagggtgcaaaatcgctcaaa-aaaaagagagggtgcaaaatcacacaattggcaaaagattggaggaaaaagtgcaattaagcct 54508814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 3930268 - 3930179
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||| ||||||||||| ||||||  ||||| | |||||||||||||||| ||||   |||||||| |||| |||||||||||||||||    
T  3930268 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcataattaataaaagata-ggggaaaaagtgcaattaagcc 3930179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 93 - 146
Target Start/End: Complemental strand, 8182046 - 8181992
Alignment:
Q  93 ggggtgcaaaatcgcacaattggcaaaa-gatatgggggaaaagtgcaattaagc 146  Q
    |||||||||||||||||||||||||||| |||| |||| ||||||||||||||||    
T  8182046 ggggtgcaaaatcgcacaattggcaaaacgatagggggcaaaagtgcaattaagc 8181992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 146
Target Start/End: Complemental strand, 22681681 - 22681576
Alignment:
Q  46 agaaagggggaaaaagatggggtgcaaaatagctcaa---ttaaaaat---atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgca 139  Q
    ||||||||| ||||||||||||||||||||  || ||   |||||||    | |||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  22681681 agaaaggggcaaaaagatggggtgcaaaatcactaaaaaattaaaaaacagagggggtgcaaaatcgcacaattgacaaaagata-ggggggaaagtgca 22681583  T
Q  140 attaagc 146  Q
    |||||||    
T  22681582 attaagc 22681576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 57 - 150
Target Start/End: Original strand, 22681845 - 22681936
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctat 150  Q
    |||||||  |||||||||| ||||||  |||||||   |||||||||| ||||||||  ||||||||| | |||||||||||||||||||||||    
T  22681845 aaaagatatggtgcaaaattgctcaa--aaaaataaatggtgcaaaattgcacaattaacaaaagataggagggaaaagtgcaattaagcctat 22681936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 11530154 - 11530225
Alignment:
Q  48 aaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaa 120  Q
    |||||||||||| ||| ||||||||||| || | ||||||||||| |||| ||||||||||||||||| ||||    
T  11530154 aaagggggaaaaggattgggtgcaaaatcgcacgattaaaaatat-gggttcaaaatcgcacaattggtaaaa 11530225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 45 - 133
Target Start/End: Original strand, 48406337 - 48406425
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaa 133  Q
    |||||||||| ||||  || ||| ||||||| ||||  |||||| ||| ||||||||||||||||||||||||||  ||| ||||||||    
T  48406337 cagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaattataggggggaaa 48406425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 5206049 - 5205986
Alignment:
Q  86 aaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    |||| |||||||||||||||||  ||||  ||||||||| || |||||||||||||||||||||    
T  5206049 aaaagatggggtgcaaaatcgccaaattaacaaaagatagggaggaaaagtgcaattaagccta 5205986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 27304806 - 27304718
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||| ||||| |||||||| ||||||   |||| | ||||||||||||||||||||| ||| ||||||  ||||||||| |||||||||||    
T  27304806 aaaatatgggttgcaaaatcgctcaaaagaaaagagggggtgcaaaatcgcacaattagcagaagata--ggggaaaagggcaattaagcc 27304718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 5206222 - 5206283
Alignment:
Q  85 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||| || ||||||||||||||||||||   |||||||| ||||||||||||||||||||||    
T  5206222 aaaaagatagggtgcaaaatcgcacaattaa-aaaagataagggggaaaagtgcaattaagcc 5206283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 148
Target Start/End: Original strand, 25225399 - 25225453
Alignment:
Q  94 gggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||||||||||||||||||||||||||| | |  | ||||||||||||||||    
T  25225399 gggtgcaaaatcgcacaattggcaaaagataggagacagaagtgcaattaagcct 25225453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 119
Target Start/End: Original strand, 44468875 - 44468949
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaa 119  Q
    |||||||| ||||||  || ||| ||||||| ||||  |||||| |||| |||||||||||||||||||||||||    
T  44468875 cagaaaggaggaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaa 44468949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 8488287 - 8488187
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||| ||||| ||||| |||||||| | | ||  |||||   |||||||||||||||||||||  ||||||||||||   |||| |||||||||    
T  8488287 cagaaaggggaaaaaaaatgggctgcaaaatcgttaaaaaaaaaa---ggggtgcaaaatcgcacaattaacaaaagatatggaaaaaaaatgcaattaa 8488191  T
Q  145 gcct 148  Q
    ||||    
T  8488190 gcct 8488187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 147
Target Start/End: Complemental strand, 49178574 - 49178533
Alignment:
Q  106 gcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||||| |||||||||||||| ||||||||||||||||||    
T  49178574 gcacaattagcaaaagatatgggagaaaagtgcaattaagcc 49178533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 8182172 - 8182228
Alignment:
Q  93 ggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||||||||||||||||| || |||| ||| ||| |||||||||||||||||||    
T  8182172 ggggtgcaaaatcgcacaattagcaaaaaaataggggtgaaaagtgcaattaagcct 8182228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 16555695 - 16555743
Alignment:
Q  95 ggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 142  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||    
T  16555695 ggtgcaaaatcgcacaattagcaaaaagataagggggaaaagtgcaatt 16555743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 25162265 - 25162349
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggg 129  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||| |||||||||| |||||||| ||||| ||| ||||    
T  25162265 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggagtgcaaaatcacacaattgacaaaatataggggg 25162349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 7603422 - 7603472
Alignment:
Q  96 gtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||||||||||||||||  |||||||| |||| |||||||||||||||||    
T  7603422 gtgcaaaatcgcacaattgtaaaaagata-ggggaaaaagtgcaattaagcc 7603472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 27304893 - 27304943
Alignment:
Q  93 ggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 142  Q
    ||||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  27304893 ggggtgcaaaatcgcacaattagcaaaaagatagggggaaaaagtgcaatt 27304943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 142
Target Start/End: Original strand, 5206100 - 5206185
Alignment:
Q  58 aaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 142  Q
    |||||| ||||||||||| |||||   ||||| | || |||||||||||||||||| || |||||||| |||| | ||||||||||    
T  5206100 aaagatagggtgcaaaatcgctcagaaaaaaagagggagtgcaaaatcgcacaattagcaaaaagatagggggaagaagtgcaatt 5206185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 144
Target Start/End: Complemental strand, 8181981 - 8181873
Alignment:
Q  36 ccttcaaaccagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaa 134  Q
    ||||| ||||| |||||||| ||||| |||||||||||||| | ||||  ||||| | |||| ||||||| |||||||| ||||||  || || ||||||    
T  8181981 ccttctaaccaaaaagggggcaaaaaaatggggtgcaaaatcggtcaa-aaaaaagagggggagcaaaattgcacaattagcaaaatttagggaggaaaa 8181883  T
Q  135 gtgcaattaa 144  Q
    || |||||||    
T  8181882 gtacaattaa 8181873  T

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Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 54509070 - 54509155
Alignment:
Q  46 agaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaa 134  Q
    |||||||||| ||||  ||| ||||||||| ||||||  ||||| |  |||||||||||||||||||| |||||| ||| |||||||||    
T  54509070 agaaagggggcaaaatttggagtgcaaaatcgctcaaaaaaaaaga--gggtgcaaaatcgcacaattagcaaaaaata-gggggaaaa 54509155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 24775625 - 24775585
Alignment:
Q  42 aaccagaaagggggaaaaagatggggtgcaaaatagctcaa 82  Q
    |||||||||||||  ||||||||||||||||||| ||||||    
T  24775625 aaccagaaaggggataaaagatggggtgcaaaattgctcaa 24775585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 119; Significance: 9e-61; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 3 - 153
Target Start/End: Original strand, 33829546 - 33829696
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  33829546 atcagacacatcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaa 33829645  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatatt 153  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  33829646 atcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctatatt 33829696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 33829133 - 33828990
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||||||||||||||||||||   |||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  33829133 atcagacacatcatcactaaatt-catggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaa 33829035  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||    
T  33829034 atcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 33828990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 45 - 150
Target Start/End: Original strand, 3403940 - 3404046
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  3403940 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaatta 3404039  T
Q  144 agcctat 150  Q
    |||||||    
T  3404040 agcctat 3404046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 42 - 148
Target Start/End: Complemental strand, 21032084 - 21031978
Alignment:
Q  42 aaccagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaa 140  Q
    |||||||||||||| |||||||||||||||||||| ||||||  ||||| | ||||||||||||||||||||| ||||||| || |||||||||||||||    
T  21032084 aaccagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagtta-gggggaaaagtgcaa 21031986  T
Q  141 ttaagcct 148  Q
    ||||||||    
T  21031985 ttaagcct 21031978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 18242107 - 18242210
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||||||||||||| ||   |||| ||||||||    
T  18242107 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagatagggaaaaaaaatgcaatta 18242206  T
Q  144 agcc 147  Q
    ||||    
T  18242207 agcc 18242210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 10087810 - 10087912
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  | | |||||||||||||||||||    
T  10087810 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactaaaggggggaaaagtgcaattaa 10087909  T
Q  145 gcc 147  Q
    |||    
T  10087910 gcc 10087912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 149
Target Start/End: Original strand, 30388315 - 30388418
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | ||||||||||||||||||||| |||||||||| |||| |||||| ||||||    
T  30388315 cagaaagggggtaaaaagatggggtgcaaaatcgctcaa--aaaaaaagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtacaatta 30388412  T
Q  144 agccta 149  Q
    | ||||    
T  30388413 aaccta 30388418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 33974251 - 33974353
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| ||||||||| |||||||||    
T  33974251 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaa 33974350  T
Q  145 gcc 147  Q
    |||    
T  33974351 gcc 33974353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 57 - 148
Target Start/End: Complemental strand, 18241944 - 18241853
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||| ||||||||||| ||||||   |||| | |||||||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  18241944 aaaagatagggtgcaaaatcgctcaaaacaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 18241853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 11656746 - 11656836
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||||||||||||||| ||||||  | ||| | ||||||||||||||||||||| |||||||||| | | ||||||||||||||||||    
T  11656746 aaaagatggggtgcaaaatcgctcaaaaataaagagggggtgcaaaatcgcacaattagcaaaagataggagagaaaagtgcaattaagcc 11656836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 3403778 - 3403717
Alignment:
Q  86 aaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  3403778 aaaagatggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 3403717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 57 - 149
Target Start/End: Complemental strand, 10039764 - 10039674
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    ||||||||||||| ||||| |||||   ||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  10039764 aaaagatggggtgtaaaatcgctcataaaaaaaga-ggggtgcaaaatcgcacaattagcaaaagata-gggggaaaagtgcaattaagccta 10039674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 7654500 - 7654603
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||| |  |||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  7654500 cagaaagggggaaaactatagggggcaaagtcactcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 7654599  T
Q  145 gcct 148  Q
    ||||    
T  7654600 gcct 7654603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 57 - 154
Target Start/End: Original strand, 21032243 - 21032341
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatgg-ggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatatta 154  Q
    ||||||||||||||||||| ||||||  |||||   || || ||||||||||||||||  ||||||||| |||||||||||||||||||||||| ||||    
T  21032243 aaaagatggggtgcaaaatcgctcaaagaaaaaagaggaggcgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcctagatta 21032341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 157
Target Start/End: Original strand, 31598221 - 31598336
Alignment:
Q  42 aaccagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaa 140  Q
    ||||| |||||||| |||||||||||||||||||| ||||||  |||||    |||||||||||||||||||| |||||||||| | ||||||| | |||    
T  31598221 aaccaaaaagggggcaaaaagatggggtgcaaaattgctcaaaaaaaaaagaagggtgcaaaatcgcacaattagcaaaagata-gagggaaaaatacaa 31598319  T
Q  141 ttaagcctatattatat 157  Q
    ||||||||  |||||||    
T  31598320 ttaagccttaattatat 31598336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 32733948 - 32734047
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||||| |||||  || ||| ||||||| ||||  |||||| |||||| |||||||||||||||||||||||  ||| || ||||||||||||||||    
T  32733948 cagaaagggagaaaattatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaa 32734047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 30388150 - 30388062
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||||||||||||||| ||||||  ||||| |  || ||||||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  30388150 aaaagatggggtgcaaaatcgctcaaa-aaaaagagaggctgcaaaatcgcacaattagcaaaagata-ggggggaaagtgcaattaagcc 30388062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 149
Target Start/End: Original strand, 13579615 - 13579706
Alignment:
Q  56 aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    ||||| |||||||||||||| ||| ||  ||||  | ||||||||||||||||||||| ||||| |||| ||| ||||||||||||||||||||    
T  13579615 aaaaaaatggggtgcaaaatcgctaaaa-aaaacgagggggtgcaaaatcgcacaattagcaaacgata-gggagaaaagtgcaattaagccta 13579706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 21032203 - 21032107
Alignment:
Q  47 gaaagggggaaaaagatggggtgcaaaatagctcaattaaa--aatatggggtgcaaaatcgcacaattggcaa-aagatatgggggaaaagtgcaa 140  Q
    ||||||||| ||||||||||||| ||||| ||||||  |||  || | |||||||||||||||||||||| ||| |||||| |||| ||||||||||    
T  21032203 gaaagggggtaaaagatggggtgaaaaatcgctcaaaaaaaagaagagggggtgcaaaatcgcacaattgacaagaagatagggggcaaaagtgcaa 21032107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 22684348 - 22684411
Alignment:
Q  83 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||| |||||||||||||||| |||||||||||||  |||  |||||||||||||||||||||    
T  22684348 ttaaaactatggggtgcaaaatcacacaattggcaaactata-aggggaaaagtgcaattaagcc 22684411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 22754720 - 22754657
Alignment:
Q  83 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||| |||||||||||||||| |||||||||||||  |||  |||||||||||||||||||||    
T  22754720 ttaaaactatggggtgcaaaatcacacaattggcaaactata-aggggaaaagtgcaattaagcc 22754657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 31598720 - 31598791
Alignment:
Q  85 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatattatat 157  Q
    ||||| ||||| |||||||||||||||||  ||||||||| ||||||||||||||||||| |||  |||||||    
T  31598720 aaaaagatgggatgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaaaccttaattatat 31598791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 3825580 - 3825530
Alignment:
Q  93 ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  3825580 ggggtgcaaaatcgcacaattagcaaaatata-gggggaaaagtgcaattaa 3825530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 148
Target Start/End: Complemental strand, 23250680 - 23250591
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||| ||| ||||||| ||||||  ||||| | ||||||||| ||| |||||||| ||||||||| |||| ||||||||||||||||||    
T  23250680 aaaagatagggcgcaaaatcgctcaaa-aaaaagagggggtgcaagatctcacaattgacaaaagata-ggggaaaaagtgcaattaagcct 23250591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 29074324 - 29074426
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||||| |||||  || ||| | ||||| ||||  || ||| ||||||||||||||||||||||||||||||  ||| ||||| |||| ||||||||    
T  29074324 cagaaagggcgaaaactataggggggaaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactata-ggggggaaagagcaattaa 29074422  T
Q  145 gcct 148  Q
    ||||    
T  29074423 gcct 29074426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 29079088 - 29079190
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||||| |||||  || ||| | ||||| ||||  || ||| ||||||||||||||||||||||||||||||  ||| ||||| |||| ||||||||    
T  29079088 cagaaagggcgaaaactataggggggaaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactata-ggggggaaagagcaattaa 29079186  T
Q  145 gcct 148  Q
    ||||    
T  29079187 gcct 29079190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 29106897 - 29106999
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||||| |||||  || ||| | ||||| ||||  || ||| ||||||||||||||||||||||||||||||  ||| ||||| |||| ||||||||    
T  29106897 cagaaagggcgaaaactataggggggaaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactata-ggggggaaagagcaattaa 29106995  T
Q  145 gcct 148  Q
    ||||    
T  29106996 gcct 29106999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 22755048 - 22755142
Alignment:
Q  52 ggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 146  Q
    ||||||||  || ||| ||||||| ||||  |||||| |||| |||||||||||||| ||||| ||||  |||  ||||||||||||||||||||    
T  22755048 ggggaaaactatagggggcaaaatcgctcgtttaaaactatgtggtgcaaaatcgcataattgacaaactataaaggggaaaagtgcaattaagc 22755142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 2762579 - 2762510
Alignment:
Q  51 gggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaa 120  Q
    |||| ||||||||| ||||||||||  |||||  ||||| | ||||||||||||||||||||| ||||||    
T  2762579 ggggcaaaaagatgaggtgcaaaatcactcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaa 2762510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 149
Target Start/End: Original strand, 23250843 - 23250947
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagct-caattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||||||||||| |||||| |||  ||  ||||| | ||||| |||| |||||||||| |||||||||| |||  ||||||||||| |    
T  23250843 cagaaagggggcaaaagatggggtacaaaatcgctaaaaaaaaaaagagggggtacaaattcgcacaattagcaaaagata-gggcaaaaagtgcaatca 23250941  T
Q  144 agccta 149  Q
    ||||||    
T  23250942 agccta 23250947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 33655115 - 33655169
Alignment:
Q  93 ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    |||||||||||| |||||||| ||||||||||  ||||| ||||||||||||||||    
T  33655115 ggggtgcaaaattgcacaattagcaaaagata-aggggacaagtgcaattaagcct 33655169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 142
Target Start/End: Complemental strand, 2762661 - 2762611
Alignment:
Q  93 ggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 142  Q
    ||||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  2762661 ggggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 2762611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 10039843 - 10039893
Alignment:
Q  93 ggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 142  Q
    ||||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  10039843 ggggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 10039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 33972082 - 33971994
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||| ||||||||||| ||||||  || || | |||||||||||||| ||||||  ||||||||| |||| |||| ||||||||||||    
T  33972082 aaaagatagggtgcaaaatcgctcaaa-aataagagggggtgcaaaatcgtacaattaacaaaagata-ggggaaaaactgcaattaagcc 33971994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 2354808 - 2354865
Alignment:
Q  91 atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    |||||||||||||||||||||||| ||||  |||   ||||||| |||||||||||||    
T  2354808 atggggtgcaaaatcgcacaattgacaaactatagacgggaaaaatgcaattaagcct 2354865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 12714481 - 12714436
Alignment:
Q  97 tgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatt 142  Q
    |||||||||||||||||  ||||||||| |||| ||||||||||||    
T  12714481 tgcaaaatcgcacaattaacaaaagatagggggcaaaagtgcaatt 12714436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 33972190 - 33972239
Alignment:
Q  94 gggtgcaaaatcgcacaattggcaaaa-gatatgggggaaaagtgcaatt 142  Q
    |||||||||||| ||||||| |||||| ||||||||| ||||||||||||    
T  33972190 gggtgcaaaatctcacaattagcaaaaagatatggggcaaaagtgcaatt 33972239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 3403867 - 3403915
Alignment:
Q  95 ggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 142  Q
    ||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  3403867 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 3403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 11656695 - 11656608
Alignment:
Q  58 aaagatggggtgcaaaatagctcaattaaaa--atatggggtgcaaaatcgcacaattggcaaaa-gatatgggggaaaagtgcaatt 142  Q
    |||||| |||||||||||  |||||  ||||  ||| |||||||||||||||||||||  ||||| |||| |||| ||||||||||||    
T  11656695 aaagatagggtgcaaaatcactcaaaaaaaagaatagggggtgcaaaatcgcacaattatcaaaacgatagggggcaaaagtgcaatt 11656608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 30388242 - 30388290
Alignment:
Q  95 ggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 142  Q
    ||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  30388242 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 30388290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 114; Significance: 9e-58; HSPs: 73)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 2639392 - 2639541
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    ||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  2639392 atcagacacatcatcgctaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaa 2639491  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatat 152  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  2639492 atcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctatat 2639541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 26841731 - 26841585
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    ||||||||||||||||||||||  |||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  26841731 atcagacacatcatcactaaaattcatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaa 26841632  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  26841631 atcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 26841585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 3 - 147
Target Start/End: Original strand, 26842148 - 26842292
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  26842148 atcatacacatcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaa 26842247  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||||||||||||||||||| ||| |||||||||| |||||||    
T  26842248 atcgcacaattggcaaaagataggggtgaaaagtgcacttaagcc 26842292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 2638965 - 2638819
Alignment:
Q  3 atcagacacatcatcactaaaacacatgggggg-ccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaa 101  Q
    |||||||||||||||||||||| || ||||||| ||| |||| ||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  2638965 atcagacacatcatcactaaaatacgtgggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaa 2638866  T
Q  102 aatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  2638865 aatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcct 2638819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 7591344 - 7591204
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    ||||||||||||||| |||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  7591344 atcagacacatcatcgctaaaacacatggggg-cctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaa 7591246  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||||||||| ||| ||||||| |||||||    
T  7591245 atcgcacaattggcaaaagataggggtgaaaagtacaattaa 7591204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 146
Target Start/End: Complemental strand, 18296219 - 18296077
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||||||||||||||||||||   |||||||||||| |||| |||||| |||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  18296219 atcagacacatcatcactaaatt-catggggggcctccaaatcagaaaaggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaa 18296121  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 146  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||    
T  18296120 atcgcacaattggcaaaagataggggtgaaaagtacaattaagc 18296077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 147
Target Start/End: Original strand, 7591760 - 7591904
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||||||||||||||||||||| || | |||||||| |||| |||||||||||||||| ||| |||||||||| ||||  ||||||| ||||||||||||    
T  7591760 atcagacacatcatcactaaaatacgtagggggcctccaaatcagaaagggggaaaaaaatgaggtgcaaaatcgctcgtttaaaaacatggggtgcaaa 7591859  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||||||||| ||||||||| | | ||||  ||||||||||||    
T  7591860 atcgcacaattgacaaaagataggagtgaaagatgcaattaagcc 7591904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 45 - 150
Target Start/End: Complemental strand, 30191026 - 30190920
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  30191026 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaatta 30190927  T
Q  144 agcctat 150  Q
    |||||||    
T  30190926 agcctat 30190920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 24832432 - 24832330
Alignment:
Q  47 gaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 145  Q
    ||||||||| |||||||||||||||||||| ||||||  ||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  24832432 gaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaag 24832333  T
Q  146 cct 148  Q
    |||    
T  24832332 cct 24832330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 56 - 157
Target Start/End: Original strand, 20347427 - 20347528
Alignment:
Q  56 aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatattat 155  Q
    ||||||||||||||||||||  |||||  ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  20347427 aaaaagatggggtgcaaaatccctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcctttattat 20347526  T
Q  156 at 157  Q
    ||    
T  20347527 at 20347528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 18296632 - 18296713
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaatt 84  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| || |||||    
T  18296632 atcagacacatcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgcacaatt 18296713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 6171408 - 6171511
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | ||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  6171408 cagaaagggggcaaaaagatggggtgcaaaattgctcaaaaaaaaaga-ggggtgcaaaatcccacaattggcaaaagataggggggaaaagtgcaatta 6171506  T
Q  144 agcct 148  Q
    |||||    
T  6171507 agcct 6171511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 51 - 148
Target Start/End: Complemental strand, 11883719 - 11883622
Alignment:
Q  51 gggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    |||| ||||||||| |||||||||| ||||||  ||||| | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  11883719 ggggcaaaaagatgaggtgcaaaattgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcct 11883622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 57 - 153
Target Start/End: Original strand, 32673107 - 32673202
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatatt 153  Q
    ||||||||||||||||||| ||||||  ||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||| ||| ||||    
T  32673107 aaaagatggggtgcaaaatcgctcaaaaaaaaatagggggtgcaaaatcgcacaattggcaaaagata-ggggaaaaagtgcaattaaacctttatt 32673202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 40469680 - 40469780
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | ||||||||||||||||||||| |||||||||| |||| |||||||||||||    
T  40469680 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaatta 40469779  T
Q  144 a 144  Q
    |    
T  40469780 a 40469780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 11883890 - 11883980
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||||| ||||||||| ||||||  ||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  11883890 aaaagatggagtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 11883980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 8851250 - 8851151
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  8851250 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 8851151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 45 - 150
Target Start/End: Complemental strand, 7664350 - 7664245
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| |||||||||||||||||||||||||  |||  ||| |||||||||||||||||||    
T  7664350 cagaaagggggaaaattatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaa 7664251  T
Q  145 gcctat 150  Q
    ||||||    
T  7664250 gcctat 7664245  T

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Target: chr2; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 147
Target Start/End: Original strand, 38490758 - 38490894
Alignment:
Q  10 acatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcac 109  Q
    |||||||||||||||   ||| |||||||| ||| || |||||||||||||||||||||||||||| ||||  ||||||  ||| | |||||||||||||    
T  38490758 acatcatcactaaaagttatgaggggccttgaaatcataaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaccatgagatgcaaaatcgcac 38490857  T
Q  110 aattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||| |||  ||| ||| | ||||||||||||||||    
T  38490858 aattggtaaactata-gggaggaaagtgcaattaagcc 38490894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 18296685 - 18296748
Alignment:
Q  85 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  18296685 aaaaagatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 18296748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 26692772 - 26692871
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  |||  ||||||||||||||||||    
T  26692772 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaa 26692871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 69 - 148
Target Start/End: Complemental strand, 37720282 - 37720203
Alignment:
Q  69 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  37720282 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 37720203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 7664625 - 7664727
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| || ||||||||||||||||    
T  7664625 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaa 7664724  T
Q  145 gcc 147  Q
    |||    
T  7664725 gcc 7664727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 16910905 - 16910827
Alignment:
Q  69 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||    
T  16910905 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactacatgggggaaaagtgcaattaagcc 16910827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 30191189 - 30191279
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||| ||||||||||| ||||||  ||||| | |||||||||||||||||||||   |||||||| ||||||||||||||||||||||    
T  30191189 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaagcc 30191279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 5379896 - 5380016
Alignment:
Q  30 ggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggg 129  Q
    ||||| || ||||| ||||||||||| |||| || ||| ||||||| || |  || ||| || ||||||||||||||||||||||| |||  ||| ||||    
T  5379896 gggggaccatcaaatcagaaagggggtaaaatatagggggcaaaatcgcacgttttaaactacggggtgcaaaatcgcacaattggtaaactataggggg 5379995  T
Q  130 gaaaagtgcaattaagcctat 150  Q
    |||||||||||||||||||||    
T  5379996 gaaaagtgcaattaagcctat 5380016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 6325299 - 6325399
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||| ||||||||  || ||| ||||||| ||||  |||| | |||| |||||||||||||||||||||||||  |||||||||||||||||||||||    
T  6325299 cagaaatggggaaaactatagggggcaaaatcgctcgtttaatactatgaggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaa 6325398  T
Q  145 g 145  Q
    |    
T  6325399 g 6325399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 52 - 148
Target Start/End: Original strand, 8851541 - 8851637
Alignment:
Q  52 ggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||||||    
T  8851541 ggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 8851637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 17851042 - 17850978
Alignment:
Q  83 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||| ||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  17851042 ttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 17850978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 45 - 149
Target Start/End: Original strand, 41790864 - 41790968
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||| |||||||  || ||| ||||||| ||||  || |||  |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  41790864 cagaaagagggaaaactatagggggcaaaatcgctcgttttaaacaatggggggcaaaatcgcacaattggcaaaatataggggggaaaagtgcaattaa 41790963  T
Q  145 gccta 149  Q
    |||||    
T  41790964 gccta 41790968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 5378778 - 5378659
Alignment:
Q  30 ggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggg 129  Q
    ||||| || ||||| ||||||| ||| |||| || ||| ||||||| || |  || ||| || |||||||||||||||||||||||||||  ||| ||||    
T  5378778 gggggaccatcaaatcagaaagagggtaaaatatagggggcaaaatcgcacgttttaaactacggggtgcaaaatcgcacaattggcaaactataggggg 5378679  T
Q  130 gaaaagtgcaattaagccta 149  Q
    ||||||||||||||||||||    
T  5378678 gaaaagtgcaattaagccta 5378659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 57 - 151
Target Start/End: Complemental strand, 20347252 - 20347159
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctata 151  Q
    ||||||| ||||||||||| ||||||  ||||| | |||||||||||||||||||||  |||||||||  ||||||||||| |||||||||||||    
T  20347252 aaaagatagggtgcaaaatcgctcaaaaaaaaaga-ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgtaattaagcctata 20347159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 40469517 - 40469427
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||| ||||||||||| ||||||  ||||| | ||||||||||||||||||||| |||||||||| | ||||||| | ||||||||||    
T  40469517 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggagggaaaaatacaattaagcc 40469427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 51 - 145
Target Start/End: Complemental strand, 15321486 - 15321394
Alignment:
Q  51 gggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 145  Q
    |||| |||||||||||||||||||| ||||||   |||||| ||| |||||||| ||||||||  |||||||||  |||||||||||||||||||    
T  15321486 ggggcaaaaagatggggtgcaaaatcgctcaaaataaaataggggatgcaaaattgcacaattaacaaaagata--ggggaaaagtgcaattaag 15321394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 57 - 144
Target Start/End: Complemental strand, 15920867 - 15920781
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||  ||||||||| | |||||||||| ||||||    
T  15920867 aaaagatggggtgcaaaattgctcaaa-aaaaagagggggtgcaaaatcgcacaattaacaaaagataggagggaaaagtgaaattaa 15920781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 18055150 - 18055050
Alignment:
Q  42 aaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaat 141  Q
    |||||||||||||  |||| |||||||||||||| ||| ||  ||||| | ||||||||||||||||||||| ||||||| || ||||||||||||||||    
T  18055150 aaccagaaaggggacaaaaaatggggtgcaaaatcgctaaaa-aaaaagagggggtgcaaaatcgcacaattagcaaaag-ta-gggggaaaagtgcaat 18055054  T
Q  142 taag 145  Q
    ||||    
T  18055053 taag 18055050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 26737732 - 26737835
Alignment:
Q  45 cagaaagggggaaaaag-atggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| ||||| |||||||| |||||  |||||  |||||   |||||||||||||||||| || |||||||||| ||| ||||||||||||||    
T  26737732 cagaaagggggcaaaaggatggggtgtaaaatctctcaaaaaaaaaagaggggtgcaaaatcgcacagttagcaaaagataggggtgaaaagtgcaatta 26737831  T
Q  144 agcc 147  Q
    ||||    
T  26737832 agcc 26737835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 140
Target Start/End: Complemental strand, 6325033 - 6324924
Alignment:
Q  31 gggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatggggg 130  Q
    ||||||| | ||| ||||||| |||||||  || |||  |||||| ||||  |||||| |||||| |||||||||||||||||||||||  ||| |||||    
T  6325033 gggggccataaaatcagaaagagggaaaactataggggacaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactatagggggg 6324934  T
Q  131 aaaagtgcaa 140  Q
    ||||||||||    
T  6324933 aaaagtgcaa 6324924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 16911221 - 16911321
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || |||  |||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| ||||  |||||||||||||    
T  16911221 cagaaagggggaaaactataggggacaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactata-ggggcgaaagtgcaattaa 16911319  T
Q  145 gc 146  Q
    ||    
T  16911320 gc 16911321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 148
Target Start/End: Original strand, 6495687 - 6495776
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||||  ||||||||| ||||||  ||||| | | |||||||||||||||||||  ||||||||| || ||||||||||||||||||||    
T  6495687 aaaagatgacgtgcaaaatcgctcaa--aaaaaaaggaggtgcaaaatcgcacaattcacaaaagatagggaggaaaagtgcaattaagcct 6495776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 148
Target Start/End: Complemental strand, 26737569 - 26737481
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||||||||||||||| | | ||  ||||| | ||||||||||||||||||||| ||||||||||  || |||||||||||||||||||    
T  26737569 aaaagatggggtgcaaaatcgttaaaa-aaaaagagggggtgcaaaatcgcacaattagcaaaagata--ggagaaaagtgcaattaagcct 26737481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 5793549 - 5793450
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||| |||||||  || ||| ||||||| ||||  |||||| ||| || |||||||||||||||||||||||  | | |||||||||||||||||||    
T  5793549 cagaaagagggaaaactatagggggcaaaatcgctcgtttaaaactataggatgcaaaatcgcacaattggcaaactacaagggggaaaagtgcaattaa 5793450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 17851354 - 17851457
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||| ||||||||||||||||||||  |||   |  ||||||||||||||    
T  17851354 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgtaaaatcgcacaattggcaaactataaaagaaaaaagtgcaattaa 17851453  T
Q  145 gcct 148  Q
    ||||    
T  17851454 gcct 17851457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 26692498 - 26692399
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||| ||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  |||  ||| ||||||||||||||    
T  26692498 cagaaaggggaaaaattatagggagcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagagggaaaaagtgcaattaa 26692399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 144
Target Start/End: Original strand, 43495441 - 43495535
Alignment:
Q  51 gggggaaaaagatggggtgcaaaatagctcaattaaa-aatatggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaattaa 144  Q
    ||||| ||| ||||||||||||||| ||||||  ||| || | |||||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  43495441 gggggcaaatgatggggtgcaaaattgctcaaaaaaataagagggggtgcaaaatcgcacaattgacaaaaagata-gggggaaaagtgcaattaa 43495535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 147
Target Start/End: Original strand, 43495569 - 43495658
Alignment:
Q  56 aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||||||||||||||||| ||||||  ||||| | ||| ||||||||||||||||| |||||| ||| || || ||||||||||||||||    
T  43495569 aaaaagatggggtgcaaaatcgctcaa-aaaaaagaggggatgcaaaatcgcacaattagcaaaatata-ggtgggaaagtgcaattaagcc 43495658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 6171245 - 6171156
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||| |||||||||||  |||||  ||||| |   |||||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  6171245 aaaagatagggtgcaaaatcactcaaaaaaaaaaaaaaggtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcc 6171156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 32672932 - 32672842
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||| ||||||||||| ||||||  ||||| |  ||||||||||||||||||||  ||||||||| ||   |||||||||||||||||    
T  32672932 aaaagatagggtgcaaaatcgctcaaaaaaaaagagagggtgcaaaatcgcacaattaacaaaagataaggaacaaaagtgcaattaagcc 32672842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 149
Target Start/End: Complemental strand, 7979667 - 7979565
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||| |||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||   |||  |||||||||||||| ||    
T  7979667 cagaaagagggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgtcaaa--ctataagggaaaagtgcaataaa 7979570  T
Q  145 gccta 149  Q
    |||||    
T  7979569 gccta 7979565  T

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Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 18750102 - 18750178
Alignment:
Q  69 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 146  Q
    ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||| ||||||||||||||    
T  18750102 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactata-gggggagaagtgcaattaagc 18750178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 19141801 - 19141898
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  || ||| |||||| |||||||||||||||||||||||   ||| |||| |||||||||||||    
T  19141801 cagaaagggggaaaactatagggggcaaaatcgctcgttttaaactatgggatgcaaaatcgcacaattggcaaa--ctatagggggaaagtgcaattaa 19141898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 18055309 - 18055367
Alignment:
Q  86 aaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||| |||||||||||||||||||||||| |||||| ||  ||| ||||||||||||||    
T  18055309 aaaagatggggtgcaaaatcgcacaattgacaaaaggtagagggaaaaagtgcaattaa 18055367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 19141507 - 19141446
Alignment:
Q  83 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 145  Q
    |||||| ||||||||||||||| ||||||||||||||  ||| |||| |||||||||||||||    
T  19141507 ttaaaactatggggtgcaaaat-gcacaattggcaaactatagggggaaaaagtgcaattaag 19141446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 29230334 - 29230280
Alignment:
Q  95 ggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    ||||||||||| |||||||| |||||||||  | |||||||||||||||||||||    
T  29230334 ggtgcaaaatcacacaattgacaaaagatagagaggaaaagtgcaattaagccta 29230280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 148
Target Start/End: Original strand, 7979993 - 7980057
Alignment:
Q  83 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    |||||| |||||||||||||||||||||||| |||||  ||| | || ||||||||||||||||||    
T  7979993 ttaaaactatggggtgcaaaatcgcacaattagcaaactata-gaggaaaaagtgcaattaagcct 7980057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 144
Target Start/End: Complemental strand, 15321600 - 15321515
Alignment:
Q  60 agatggggtgcaaaatagctcaattaaa-aatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||| ||||||  ||| || |  ||||||||||||||||| |||| |||||||| |||  ||||||||||||||    
T  15321600 agatggggtgcaaaatcgctcaaaaaaagaagagagggtgcaaaatcgcacagttggaaaaagataggggacaaaagtgcaattaa 15321515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 144
Target Start/End: Complemental strand, 17345822 - 17345736
Alignment:
Q  56 aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||| |||||||||||  |||||   |||| | |||||||||||| ||| |||| ||||||||||  ||||||||||||||||||    
T  17345822 aaaaagatagggtgcaaaatcactcaaaataaaagagggggtgcaaaattgcataattagcaaaagata--ggggaaaagtgcaattaa 17345736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 31641598 - 31641545
Alignment:
Q  31 gggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaatt 84  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||| || |||||    
T  31641598 gggggccttcaaaccagaaaggggggaaaggatggagtgcaaaatcgcacaatt 31641545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 149
Target Start/End: Original strand, 17345999 - 17346090
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    |||| ||||| |||||||| ||||||  | ||| | | ||||||||||||||||||| ||||||||||   || |||||||||||||||||||    
T  17345999 aaaatatgggatgcaaaatcgctcaaaaataaagaggaggtgcaaaatcgcacaattagcaaaagata-aaggaaaaagtgcaattaagccta 17346090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 18055257 - 18055169
Alignment:
Q  58 aaagatggggtgcaaaatagctcaattaaa-aatatggggtgcaaaatcgcacaattggcaaaa-gatatgggggaaaagtgcaattaa 144  Q
    ||||||||| |||||||| ||||||  ||| || | ||||||||||||||||||||||||||||  ||| || | ||||||||||||||    
T  18055257 aaagatgggatgcaaaatcgctcaaaaaaataagagggggtgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 18055169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 40221364 - 40221313
Alignment:
Q  95 ggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||||||||| |||||| |||||||||| |||||||| |||||||||||||    
T  40221364 ggtgcaaaatcgaacaattagcaaaagata-gggggaaaggtgcaattaagcc 40221313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 142
Target Start/End: Original strand, 40221446 - 40221538
Alignment:
Q  52 ggggaaaaagatggggtgcaaaatagctcaattaaa-aatatggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 142  Q
    |||| |||||||| |||||||||| ||||||  ||| || | ||||||||||||||||||||| || |||||||| |||| ||||| ||||||    
T  40221446 ggggcaaaagatgaggtgcaaaatcgctcaaaaaaagaagaaggggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagcgcaatt 40221538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 40469607 - 40469655
Alignment:
Q  95 ggtgcaaaatcgcacaattggcaaaa-gatatgggggaaaagtgcaatt 142  Q
    ||||||||||||||||||| |||||| |||| |||||||||||||||||    
T  40469607 ggtgcaaaatcgcacaattagcaaaacgataagggggaaaagtgcaatt 40469655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 43495356 - 43495308
Alignment:
Q  100 aaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    |||||||||||||| |||||| ||| | |||||||||||||||||||||    
T  43495356 aaaatcgcacaattagcaaaatataggtgggaaaagtgcaattaagcct 43495308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 58 - 151
Target Start/End: Original strand, 40221545 - 40221631
Alignment:
Q  58 aaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctata 151  Q
    |||||||||||||||||| ||||||  ||||| |||||||        |||||||| |||||||||||| || |||||||||||||| ||||||    
T  40221545 aaagatggggtgcaaaatcgctcaaaaaaaaagatggggtt-------gcacaattagcaaaagatatgaggaaaaagtgcaattaaacctata 40221631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 41790592 - 41790494
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||| ||||||  || ||| ||||||| ||||  || |||  |||||||||||||||||||||||| ||||  ||| ||||||||| |||||||||    
T  41790592 cagaaaggaggaaaactatagggggcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattgacaaactata-gggggaaaaatgcaattaa 41790494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 26737657 - 26737706
Alignment:
Q  94 gggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 142  Q
    |||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  26737657 gggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 26737706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 29343633 - 29343584
Alignment:
Q  95 ggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||||||| |||||||| |||||||||  | ||||||||||||||||    
T  29343633 ggtgcaaaatcacacaattgacaaaagatagagaggaaaagtgcaattaa 29343584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 32673020 - 32673069
Alignment:
Q  94 gggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 142  Q
    |||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  32673020 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 32673069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 6495519 - 6495468
Alignment:
Q  94 gggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 146  Q
    ||||||||||||||||||||  |||| |||| || ||||||||||||||||||    
T  6495519 gggtgcaaaatcgcacaattaacaaa-gatagggaggaaaagtgcaattaagc 6495468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 142
Target Start/End: Complemental strand, 11883799 - 11883751
Alignment:
Q  95 ggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 142  Q
    ||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  11883799 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 11883751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 29230562 - 29230602
Alignment:
Q  110 aattggcaaaagatatgggggaaaagtgcaattaagcctat 150  Q
    ||||| |||||||||||| |||||| |||||||||||||||    
T  29230562 aattgacaaaagatatggaggaaaaatgcaattaagcctat 29230602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 29343861 - 29343901
Alignment:
Q  110 aattggcaaaagatatgggggaaaagtgcaattaagcctat 150  Q
    ||||| |||||||||||| |||||| |||||||||||||||    
T  29343861 aattgacaaaagatatggaggaaaaatgcaattaagcctat 29343901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 113; Significance: 3e-57; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 44599633 - 44599489
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  44599633 atcagacacatcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaa 44599534  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||    
T  44599533 atcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 44599489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 13863457 - 13863311
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  13863457 atcagacacatcatcactaaaacacatggggggcctccaaatcagaaagagggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaa 13863358  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    |||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  13863357 atcgcacaattggcaaaagataggggtgaaaaatgcaattaagccta 13863311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 13863868 - 13864011
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    ||||||||||||||||||||||||||| |||| ||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||    
T  13863868 atcagacacatcatcactaaaacacatcgggg-cctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgc-aa 13863965  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||    
T  13863966 atcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 13864011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 44600046 - 44600190
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||||||||||||||||||||   |||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  44600046 atcagacacatcatcactaaatt-catggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaa 44600144  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||    
T  44600145 atcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 44600190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 8643677 - 8643822
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||| |||||||||| ||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||| ||||  |||| || ||||||||||||    
T  8643677 atcaaacacatcatcgctaaaacacatagggg-ccttcaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaataacatggggtgcaaa 8643775  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    ||||||||||||| |||||||| ||  ||||||||||||||||||||    
T  8643776 atcgcacaattggtaaaagatagggatgaaaagtgcaattaagccta 8643822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 6 - 158
Target Start/End: Original strand, 46816225 - 46816376
Alignment:
Q  6 agacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatc 105  Q
    ||||||||||||| ||||| | |||||| |||||||||||||||||||| |||| |||||||| |||||| ||||  |||||||||||||||||||||||    
T  46816225 agacacatcatcattaaaatatatgggg-gccttcaaaccagaaaggggaaaaatgatggggtacaaaatcgctcgtttaaaaatatggggtgcaaaatc 46816323  T
Q  106 gcacaattggcaaaagatatgggggaaaagtgcaattaagcctatattatata 158  Q
    ||| |||||| ||||||||  ||| ||||||||||||||||||| ||| ||||    
T  46816324 gcataattggtaaaagatagcgggaaaaagtgcaattaagcctaaattttata 46816376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 47 - 149
Target Start/End: Original strand, 9412278 - 9412381
Alignment:
Q  47 gaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 145  Q
    ||||||||| |||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9412278 gaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 9412377  T
Q  146 ccta 149  Q
    ||||    
T  9412378 ccta 9412381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 45 - 153
Target Start/End: Original strand, 3687608 - 3687716
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3687608 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaa-aaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaatta 3687706  T
Q  144 agcctatatt 153  Q
    |||| |||||    
T  3687707 agccaatatt 3687716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 45 - 149
Target Start/End: Complemental strand, 10533136 - 10533032
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  10533136 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 10533037  T
Q  145 gccta 149  Q
    |||||    
T  10533036 gccta 10533032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 45 - 153
Target Start/End: Original strand, 37889211 - 37889319
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||||| |||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  37889211 cagaaagggagaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 37889310  T
Q  145 gcctatatt 153  Q
    |||||||||    
T  37889311 gcctatatt 37889319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 17157069 - 17156966
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||| |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  17157069 cagaaagggggaaaactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 17156970  T
Q  145 gcct 148  Q
    ||||    
T  17156969 gcct 17156966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 37888935 - 37888833
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  37888935 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 37888836  T
Q  145 gcc 147  Q
    |||    
T  37888835 gcc 37888833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 37972350 - 37972451
Alignment:
Q  47 gaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 146  Q
    |||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  37972350 gaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagc 37972449  T
Q  147 ct 148  Q
    ||    
T  37972450 ct 37972451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 20419276 - 20419379
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  20419276 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 20419375  T
Q  145 gcct 148  Q
    ||||    
T  20419376 gcct 20419379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 22740258 - 22740155
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  22740258 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 22740159  T
Q  145 gcct 148  Q
    ||||    
T  22740158 gcct 22740155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 149
Target Start/End: Complemental strand, 20418990 - 20418886
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||||| |||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  20418990 cagaaagggtgaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 20418891  T
Q  145 gccta 149  Q
     ||||    
T  20418890 accta 20418886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 3205045 - 3205148
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| || |||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  3205045 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactacggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 3205144  T
Q  145 gcct 148  Q
    ||||    
T  3205145 gcct 3205148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 9035244 - 9035347
Alignment:
Q  45 cagaaagggg-gaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    |||||||||| |||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| ||||||||||||||||||    
T  9035244 cagaaaggggagaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaatta 9035343  T
Q  144 agcc 147  Q
    ||||    
T  9035344 agcc 9035347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 57 - 148
Target Start/End: Complemental strand, 9412113 - 9412022
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||| ||||| ||||| ||||||  ||||| | |||||||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  9412113 aaaagatagggtggaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcct 9412022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 18864069 - 18863970
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  18864069 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 18863970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 149
Target Start/End: Complemental strand, 9034970 - 9034865
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatgggg-tgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||| |||| ||||||||||||||||||  ||| ||||||||||||||||||    
T  9034970 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggggtgcagaatcgcacaattggcaaattataggggggaaaagtgcaatta 9034871  T
Q  144 agccta 149  Q
    ||||||    
T  9034870 agccta 9034865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 48 - 148
Target Start/End: Original strand, 13744188 - 13744287
Alignment:
Q  48 aaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| ||||||||||||||||||||||    
T  13744188 aaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaagcc 13744286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 45 - 149
Target Start/End: Original strand, 18864354 - 18864457
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| |||| |||||||||||||||||||||||||  ||| ||||||||||| |||||||    
T  18864354 cagaaagggggaaaactatagggggcaaaatcgctcttttaaaactatgaggtgcaaaatcgcacaattggcaaactata-gggggaaaagtacaattaa 18864452  T
Q  145 gccta 149  Q
    |||||    
T  18864453 gccta 18864457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 45 - 149
Target Start/End: Complemental strand, 37972062 - 37971958
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||| ||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  | | ||| |||||||||||||||    
T  37972062 cagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactacaggggagaaaagtgcaattaa 37971963  T
Q  145 gccta 149  Q
    |||||    
T  37971962 gccta 37971958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 29293024 - 29292921
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  || |||  ||||| |||||||||||||||||||||||  ||| |||||||||||||||||||    
T  29293024 cagaaagggggaaaactatagggggcaaaatcgctcgttttaaacaatgggatgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 29292925  T
Q  145 gcct 148  Q
    ||||    
T  29292924 gcct 29292921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 13741659 - 13741557
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||| |||||||  || ||| ||||||| ||||  |||||| |||||||||||||||||||||||||| |||  ||| ||||||||| |||||||||    
T  13741659 cagaaagtgggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggtaaactataggggggaaaaatgcaattaa 13741560  T
Q  145 gcc 147  Q
    |||    
T  13741559 gcc 13741557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 65 - 153
Target Start/End: Original strand, 15567246 - 15567331
Alignment:
Q  65 gggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatatt 153  Q
    ||||||||||| ||||||  ||||||||| ||||||||||||||| |   |||||||||| ||||||||||||||||||| ||||||||    
T  15567246 gggtgcaaaatcgctcaaaaaaaaatatgcggtgcaaaatcgcacta---gcaaaagataggggggaaaagtgcaattaaacctatatt 15567331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 36527750 - 36527852
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| |||||| |||||||||||| ||||||||||  ||||| ||||||| |||||||||    
T  36527750 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcataattggcaaactatatgagggaaaaatgcaattaa 36527849  T
Q  145 gcc 147  Q
    |||    
T  36527850 gcc 36527852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 149
Target Start/End: Original strand, 23686683 - 23686773
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    ||||||||||||||||||| |||| |  ||||| | ||||| ||||||||||||||| |||||||||| |||| |||||||||||||||||||    
T  23686683 aaaagatggggtgcaaaatcgctccaaaaaaaaga-ggggt-caaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccta 23686773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 3204769 - 3204669
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||| |||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||   ||| |||| |||||||||||||    
T  3204769 cagaaagagggaaaactatagggggcaaaattgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa--ctatagggggaaagtgcaattaa 3204672  T
Q  145 gcc 147  Q
    |||    
T  3204671 gcc 3204669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 13772702 - 13772639
Alignment:
Q  86 aaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    |||| ||||||||||||||| ||||||| |||||||||| || |||||||||||||||||||||    
T  13772702 aaaagatggggtgcaaaatcacacaattagcaaaagatagggaggaaaagtgcaattaagccta 13772639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 65 - 147
Target Start/End: Original strand, 13772872 - 13772955
Alignment:
Q  65 gggtgcaaaatagctcaattaaaaat-atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||||||| ||||||  |||||  | ||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||    
T  13772872 gggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcgcacaattagcaaatgataggggggaaaagtgcaattaagcc 13772955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 16198965 - 16199032
Alignment:
Q  81 aattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    |||||||| ||||||||||||||||||||||||||||||  |||  ||| ||||||||||||||||||    
T  16198965 aattaaaactatggggtgcaaaatcgcacaattggcaaactataatgggaaaaagtgcaattaagcct 16199032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 29293298 - 29293400
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  || |||  |||| ||||||||||||||||||||||||  ||| ||||||||| |||||||||    
T  29293298 cagaaagggggaaaactatagggggcaaaatcgctcgttttaaacaatggagtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaa 29293397  T
Q  145 gcc 147  Q
    |||    
T  29293398 gcc 29293400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 150
Target Start/End: Original strand, 42418980 - 42419085
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatgggg-tgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||| ||||||| |||||||||||||||  ||| ||||||||||||||||||    
T  42418980 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggggtgcaaaaacgcacaattggcaaactata-gggggaaaagtgcaatta 42419078  T
Q  144 agcctat 150  Q
    | |||||    
T  42419079 aacctat 42419085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 3687445 - 3687353
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaat-atggggtgcaaaatcgcacaattggcaaaagata-tgggggaaaagtgcaattaagcc 147  Q
    ||||||| ||||||||||| ||||||  |||||  | |||||||||||||||||||||  |||||||||  ||||||||||||||||||||||    
T  3687445 aaaagatagggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagatagggggggaaaagtgcaattaagcc 3687353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 144
Target Start/End: Original strand, 22740550 - 22740641
Alignment:
Q  52 ggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  22740550 ggggaaaactatagggagcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaa 22740641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 48359383 - 48359320
Alignment:
Q  83 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||| ||||||||||||||||||||||||| ||||  ||| ||||||||||||||||||||||    
T  48359383 ttaaaactatggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaagcc 48359320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 146
Target Start/End: Complemental strand, 5735344 - 5735253
Alignment:
Q  56 aaaaagatggggtgcaaaatagctcaattaaaaatatggg-gtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 146  Q
    ||||||||| |||||||||| ||||||  ||||| |  || |||||||||||||||||| || ||||||| ||| |||||||||||||||||    
T  5735344 aaaaagatgtggtgcaaaatcgctcaaaaaaaaaaaaaggagtgcaaaatcgcacaattagccaaagataggggagaaaagtgcaattaagc 5735253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 144
Target Start/End: Original strand, 27096306 - 27096392
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||| |||||||||||||| ||||||  || || | ||| ||||||||| |||||||| ||||||||| |||||||||||||||||||    
T  27096306 aaaatatggggtgcaaaatcgctcaaaaaagaagaggggatgcaaaatcacacaattgacaaaagata-gggggaaaagtgcaattaa 27096392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 144
Target Start/End: Complemental strand, 27181997 - 27181911
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||| |||||||||||||| ||||||  || || | ||| ||||||||| |||||||| ||||||||| |||||||||||||||||||    
T  27181997 aaaatatggggtgcaaaatcgctcaaaaaagaagaggggatgcaaaatcacacaattgacaaaagata-gggggaaaagtgcaattaa 27181911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 38826865 - 38826968
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||  | ||  |||||| |||| |||||||||||||||||||| ||||  ||| ||||||||| |||||||||    
T  38826865 cagaaagggggaaaactatagggggcaaaaccgttcgtttaaaactatgaggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaa 38826964  T
Q  145 gcct 148  Q
    ||||    
T  38826965 gcct 38826968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 147
Target Start/End: Complemental strand, 23686525 - 23686421
Alignment:
Q  42 aaccagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaa 140  Q
    ||||||||| |||| ||||||||||| |||||||| ||||||  ||| | |  ||||||||||| | |||||| |||||||||| |||||||||||||||    
T  23686525 aaccagaaatggggcaaaaagatggg-tgcaaaatcgctcaaaaaaatagagagggtgcaaaattgtacaattagcaaaagata-gggggaaaagtgcaa 23686428  T
Q  141 ttaagcc 147  Q
    |||||||    
T  23686427 ttaagcc 23686421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 51 - 144
Target Start/End: Complemental strand, 27096262 - 27096168
Alignment:
Q  51 gggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattgg-caaaagatatgggggaaaagtgcaattaa 144  Q
    ||||| ||||||| ||||| ||||| ||||||  ||||| | ||| |||||||||||||||||||  |||||||| |||| ||||||||||||||    
T  27096262 gggggcaaaagatagggtgaaaaattgctcaaaaaaaaagaggggttgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaattaa 27096168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 51 - 144
Target Start/End: Original strand, 27182041 - 27182135
Alignment:
Q  51 gggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattgg-caaaagatatgggggaaaagtgcaattaa 144  Q
    ||||| ||||||| ||||| ||||| ||||||  ||||| | ||| |||||||||||||||||||  |||||||| |||| ||||||||||||||    
T  27182041 gggggcaaaagatagggtgaaaaattgctcaaaaaaaaagaggggttgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaattaa 27182135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 144
Target Start/End: Complemental strand, 38191367 - 38191265
Alignment:
Q  42 aaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaat 141  Q
    |||| |||||||||||||||||||| |||||||  ||| ||  ||||| |  || |||||||||||| |||| ||||||||||  | |||||||||||||    
T  38191367 aacccgaaagggggaaaaagatgggatgcaaaagcgctaaaaaaaaaaaagaggatgcaaaatcgcataattagcaaaagataaagaggaaaagtgcaat 38191268  T
Q  142 taa 144  Q
    |||    
T  38191267 taa 38191265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 148
Target Start/End: Complemental strand, 42418692 - 42418590
Alignment:
Q  46 agaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 145  Q
    ||||||||||||||  || ||| ||||||| ||||  |||||| ||| || | ||||||||||||||| |||||  ||| |||||||||||| |||||||    
T  42418692 agaaagggggaaaactatagggggcaaaatcgctcgtttaaaactataggatacaaaatcgcacaattagcaaactataggggggaaaagtgaaattaag 42418593  T
Q  146 cct 148  Q
    |||    
T  42418592 cct 42418590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 120
Target Start/End: Complemental strand, 46815308 - 46815195
Alignment:
Q  6 agacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatc 105  Q
    ||||||||||||||||||||| ||||| | | |||||| ||||||||||||||| ||||| |||||| || | |   ||||||||||| | ||||| ||     
T  46815308 agacacatcatcactaaaacatatgggag-cattcaaatcagaaagggggaaaatgatggagtgcaagatcgtttgtttaaaaatatgagatgcaagatt 46815210  T
Q  106 gcacaattggcaaaa 120  Q
    ||||||||| |||||    
T  46815209 gcacaattgacaaaa 46815195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 148
Target Start/End: Original strand, 30857818 - 30857959
Alignment:
Q  7 gacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcg 106  Q
    ||||||||| |||| ||||||||| |||| | | |||| |||||  ||| ||||||  ||||| ||||| | ||| |  |||  |||||||||||||| |    
T  30857818 gacacatcagcactgaaacacatgagggggcattaaactagaaaatgggcaaaagagagggtgtaaaatcgttcattgcaaataatggggtgcaaaattg 30857917  T
Q  107 cacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    |||||||| ||||||||| | |  ||||||||||||||||||    
T  30857918 cacaattgacaaaagataagagacaaaagtgcaattaagcct 30857959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 33628653 - 33628718
Alignment:
Q  86 aaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctata 151  Q
    |||| ||||||||||||||||||||||| | ||||||||  ||| |||||||||||| ||||||||    
T  33628653 aaaagatggggtgcaaaatcgcacaattagtaaaagatagagggaaaaagtgcaatttagcctata 33628718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 57 - 149
Target Start/End: Complemental strand, 6908302 - 6908211
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    ||||||| | ||||||||| ||| ||  ||||| |  ||||||||||||||||||||  ||| ||||| ||||||||||||||||||||||||    
T  6908302 aaaagatagagtgcaaaatcgctaaaaaaaaaaaaaagggtgcaaaatcgcacaattaacaatagata-gggggaaaagtgcaattaagccta 6908211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 15567079 - 15567019
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaa 120  Q
    ||||||||||||||||||| ||||||  ||||||| ||||||||||||||||||||| ||||||    
T  15567079 aaaagatggggtgcaaaatcgctcaa--aaaaata-ggggtgcaaaatcgcacaattagcaaaa 15567019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 57 - 145
Target Start/End: Complemental strand, 29291896 - 29291808
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 145  Q
    ||||||||||||| ||||| |||| |  ||||| | |||||||||||||||| ||||  ||||||||| || | |||||||||||||||    
T  29291896 aaaagatggggtgtaaaatcgctctaaaaaaaagagggggtgcaaaatcgcataattatcaaaagatagggagaaaaagtgcaattaag 29291808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 45 - 149
Target Start/End: Original strand, 48359610 - 48359713
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  || ||| |||| ||||||||||||||||||||| |||  ||| |||| |||||||||||||     
T  48359610 cagaaagggggaaaactatagggggcaaaatcgctcgttttaaactatgtggtgcaaaatcgcacaattggtaaactata-ggggaaaaagtgcaattat 48359708  T
Q  145 gccta 149  Q
    |||||    
T  48359709 gccta 48359713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 35080021 - 35079960
Alignment:
Q  85 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||||  |||||||||| | ||||||| |||||||||| ||||||||||||||||||||||    
T  35080021 aaaaatagtgggtgcaaaaccccacaattagcaaaagata-gggggaaaagtgcaattaagcc 35079960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 5349724 - 5349784
Alignment:
Q  84 taaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||| |||||||||||||||||||||||  |||||||||   ||| ||||||||||||||||    
T  5349724 taaaaagatggggtgcaaaatcgcacaattaacaaaagata---ggggaaagtgcaattaagcc 5349784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 146
Target Start/End: Original strand, 8953889 - 8953941
Alignment:
Q  93 ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 146  Q
    |||||||||||| ||||||||  ||||||||| |||||||||||||||||||||    
T  8953889 ggggtgcaaaattgcacaattaacaaaagata-gggggaaaagtgcaattaagc 8953941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 18925315 - 18925373
Alignment:
Q  86 aaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 146  Q
    |||| ||||||||||||||||||||||| |||||  |||| | ||||||||||||||||||    
T  18925315 aaaaaatggggtgcaaaatcgcacaattagcaaa--atatagaggaaaagtgcaattaagc 18925373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 147
Target Start/End: Original strand, 29292001 - 29292095
Alignment:
Q  51 gggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||| |||||||| ||||||||||| ||| ||  ||||| | |||||| |||||||||||||| ||||||| ||  ||  |||||||||||||||||    
T  29292001 ggggcaaaaagatagggtgcaaaatcgctaaa--aaaaagagggggtggaaaatcgcacaattagcaaaagttagaggaaaaaagtgcaattaagcc 29292095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 36527447 - 36527387
Alignment:
Q  83 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||| ||||||||||||||||||||||||| ||||  ||| |||| ||||||||||||||    
T  36527447 ttaaaactatggggtgcaaaatcgcacaattgacaaactata-ggggaaaaagtgcaattaa 36527387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 18925114 - 18925062
Alignment:
Q  95 ggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||||||| |||||||| |||||||||| ||  ||||||||||||||||||    
T  18925114 ggtgcaaaattgcacaattagcaaaagatagggaagaaaagtgcaattaagcc 18925062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 147
Target Start/End: Complemental strand, 27096149 - 27096047
Alignment:
Q  42 aaccagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaa 140  Q
    |||||||||||||| ||||| |||||||||||||| ||| ||  |||||    || | ||||||||||||||| |||||| ||| ||||| |||||||||    
T  27096149 aaccagaaagggggcaaaaaaatggggtgcaaaatcgctaaaaaaaaaaa---ggatacaaaatcgcacaattagcaaaatata-ggggggaaagtgcaa 27096054  T
Q  141 ttaagcc 147  Q
    |||||||    
T  27096053 ttaagcc 27096047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 147
Target Start/End: Original strand, 27182154 - 27182256
Alignment:
Q  42 aaccagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaa 140  Q
    |||||||||||||| ||||| |||||||||||||| ||| ||  |||||    || | ||||||||||||||| |||||| ||| ||||| |||||||||    
T  27182154 aaccagaaagggggcaaaaaaatggggtgcaaaatcgctaaaaaaaaaaa---ggatacaaaatcgcacaattagcaaaatata-ggggggaaagtgcaa 27182249  T
Q  141 ttaagcc 147  Q
    |||||||    
T  27182250 ttaagcc 27182256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 18925229 - 18925280
Alignment:
Q  93 ggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatta 143  Q
    |||||||||||||||||||||||| |||||||| |||| |||||| ||||||    
T  18925229 ggggtgcaaaatcgcacaattggcaaaaagatagggggcaaaagttcaatta 18925280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 5349550 - 5349497
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaatt 113  Q
    ||||||||||||||||||| |||||   ||||| | |||||||||||||||||||||    
T  5349550 aaaagatggggtgcaaaatcgctca---aaaaaaagggggtgcaaaatcgcacaatt 5349497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 6908485 - 6908534
Alignment:
Q  94 gggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||||||| |||||| ||| ||||| |||||||||||||    
T  6908485 gggtgcaaaatcgcacaattagcaaaaaata-ggggggaaagtgcaattaa 6908534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 148
Target Start/End: Complemental strand, 34235778 - 34235737
Alignment:
Q  107 cacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    |||||||||||||||||  | |||||||||||||||||||||    
T  34235778 cacaattggcaaaagatgggagggaaaagtgcaattaagcct 34235737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 38191435 - 38191387
Alignment:
Q  95 ggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatta 143  Q
    |||||||||||||||||||||| |||||||| |||| |||||||||||||    
T  38191435 ggtgcaaaatcgcacaattggcaaaaagata-ggggaaaaagtgcaatta 38191387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 146
Target Start/End: Complemental strand, 39983753 - 39983700
Alignment:
Q  93 ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 146  Q
    ||||||| |||||||| ||||   |||||||| |||||||||||||||||||||    
T  39983753 ggggtgcgaaatcgcataattaataaaagataagggggaaaagtgcaattaagc 39983700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 145
Target Start/End: Complemental strand, 33628475 - 33628397
Alignment:
Q  65 gggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 145  Q
    ||||||||||| ||||||  ||||| | ||| |||||||| |||||||| |||||||||| || | |||||||||||||||    
T  33628475 gggtgcaaaatcgctcaaa-aaaaagaggggatgcaaaattgcacaattagcaaaagataaggag-aaaagtgcaattaag 33628397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 34235978 - 34236030
Alignment:
Q  93 ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 145  Q
    ||||||||||||||||||||| ||||||||||   ||||||| | ||||||||    
T  34235978 ggggtgcaaaatcgcacaattagcaaaagatagaagggaaaaatacaattaag 34236030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 35080215 - 35080259
Alignment:
Q  85 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggg 129  Q
    ||||| |||||||||||||||||||||||  ||||||||| ||||    
T  35080215 aaaaagatggggtgcaaaatcgcacaattaacaaaagataagggg 35080259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 5e-56; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 13026779 - 13026633
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||| ||||||||    
T  13026779 atcagacacatcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatgaggtgcaaa 13026680  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  13026679 atcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 13026633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 9823271 - 9823416
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    ||||||||||||||||||||||  |||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  9823271 atcagacacatcatcactaaaattcatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaa 9823370  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||    
T  9823371 atcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 9823416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 3 - 147
Target Start/End: Original strand, 39723958 - 39724102
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||| |||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  39723958 atcaaacacatcatcactaaaacacatggagggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaa 39724057  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||    
T  39724058 atcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 39724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 22851534 - 22851390
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    ||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||| |||   ||||||| ||||||||||||    
T  22851534 atcagacacatcatcactaaaacacatggagggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgcttgtttaaaaacatggggtgcaaa 22851435  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||||    
T  22851434 atcgcacaattgacaaaagataggggtgaaaagtgcaattaagcc 22851390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 3 - 144
Target Start/End: Original strand, 13027192 - 13027332
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||||||||||||||||||||   |||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  13027192 atcagacacatcatcactaaatt-catggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaa 13027290  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||||||||| ||| |||||||||||||||    
T  13027291 atcgcacaattggcaaaagataggggtgaaaagtgcaattaa 13027332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 6 - 151
Target Start/End: Original strand, 13937303 - 13937447
Alignment:
Q  6 agacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatc 105  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||  |||  ||||||| |||||||||||| ||    
T  13937303 agacacatcatcactaaaacacatgggg-gccttcaaaccagaaagggggaaaaggatgaggtgcaaaatcactcgtttaaaaacatggggtgcaaattc 13937401  T
Q  106 gcacaattggcaaaagatatgggggaaaagtgcaattaagcctata 151  Q
    ||||||||| ||||| ||| ||||||||||||||||||||||||||    
T  13937402 gcacaattgacaaaaaataggggggaaaagtgcaattaagcctata 13937447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 39723544 - 39723425
Alignment:
Q  5 cagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaat 104  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||| ||||||||    
T  39723544 cagacacatcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatgggatgcaaaat 39723445  T
Q  105 cgcacaattggcaaaagata 124  Q
    ||||||||||||||||||||    
T  39723444 cgcacaattggcaaaagata 39723425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 6 - 147
Target Start/End: Complemental strand, 3307479 - 3307338
Alignment:
Q  6 agacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatc 105  Q
    |||||||||||||||||||||||| |||||||| |||| ||||||||| ||||||||||||||||||||| |||   ||||||||||||| |||||||||    
T  3307479 agacacatcatcactaaaacacatagggggcctccaaatcagaaagggagaaaaagatggggtgcaaaatcgcttgtttaaaaatatgggatgcaaaatc 3307380  T
Q  106 gcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||||| ||||||||| ||| ||||| ||||||||||||    
T  3307379 gcacaattgacaaaagataggggtgaaaaatgcaattaagcc 3307338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 9822892 - 9822748
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    ||||||||||| |||||||||||||||||| ||||| |||| |||||||||||||||||||  |||||||||| ||||  ||||||| ||||||||||||    
T  9822892 atcagacacatgatcactaaaacacatgggtggcctccaaatcagaaagggggaaaaagatatggtgcaaaatcgctcgtttaaaaacatggggtgcaaa 9822793  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||||||||  |||||||| ||| ||||||||||||||||||    
T  9822792 atcgcacaattgataaaagataggggtgaaaagtgcaattaagcc 9822748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 6092915 - 6092776
Alignment:
Q  6 agacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatc 105  Q
    ||||||||||||||||||||||||||||| |||| ||| | |||| |||||||||||||||||||||||| | ||||||||||||||||| |||||||||    
T  6092915 agacacatcatcactaaaacacatggggg-cctttaaatctgaaaaggggaaaaagatggggtgcaaaatcgttcaattaaaaatatgggatgcaaaatc 6092817  T
Q  106 gcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||||| ||||||||| ||||||||| |||||||||||||    
T  6092816 gcacaattgacaaaagata-gggggaaaa-tgcaattaagcct 6092776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 148
Target Start/End: Complemental strand, 13936853 - 13936722
Alignment:
Q  13 tcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaat 112  Q
    |||||||||||||| |||| |  |||||||| |||||||||| |||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  13936853 tcatcactaaaacatatggag--ccttcaaatcagaaagggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaat 13936757  T
Q  113 tggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||| |||||||| |||||||||||||||||||||||    
T  13936756 tggtaaaagata-gggggaaaagtgcaattaagcct 13936722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 41662354 - 41662457
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41662354 cagaaagggggcaaaaagatggggtgcaaaatcgctcaataaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaatta 41662453  T
Q  144 agcc 147  Q
    ||||    
T  41662454 agcc 41662457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 8 - 149
Target Start/End: Complemental strand, 15042283 - 15042143
Alignment:
Q  8 acacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgc 107  Q
    ||||||||||||| ||||||| ||||  |||| ||| ||||||||||||||| ||||| ||||||||| ||||| ||||||  || |||||||||||| |    
T  15042283 acacatcatcactgaaacacacgggga-ccttgaaatcagaaagggggaaaatgatggcgtgcaaaatcgctcatttaaaacaatagggtgcaaaatcac 15042185  T
Q  108 acaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  15042184 acaattggcaaaagataaggggggaaagtgcaattaaaccta 15042143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 145
Target Start/End: Complemental strand, 765835 - 765736
Alignment:
Q  47 gaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 145  Q
    ||||||||| |||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  765835 gaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 765736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 12281225 - 12281123
Alignment:
Q  47 gaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 145  Q
    ||||||||| |||||||||||||||||||| ||||||  ||||| | | |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12281225 gaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagaggaggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 12281126  T
Q  146 cct 148  Q
    |||    
T  12281125 cct 12281123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 15156136 - 15156239
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||||||||||||||||||| ||| ||  ||||| | |||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  15156136 cagaaagggggcaaaaagatggggtgcaaaatcgctaaaaaaaaaagagggggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaatta 15156235  T
Q  144 agcc 147  Q
    ||||    
T  15156236 agcc 15156239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 43245974 - 43245871
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||| | |||||||||||||||||||||  ||||||||| |||| |||||||||||||    
T  43245974 cagaaagggggcaaaaagatggggtgcaaaatcgctcaataaaaaagagggggtgcaaaatcgcacaattatcaaaagatagggggaaaaagtgcaatta 43245875  T
Q  144 agcc 147  Q
    ||||    
T  43245874 agcc 43245871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 57 - 149
Target Start/End: Complemental strand, 15155973 - 15155881
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    ||||||| ||||||||||| ||||||  ||||| | |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  15155973 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccta 15155881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 45 - 149
Target Start/End: Complemental strand, 37396810 - 37396706
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||| ||||||  ||| |||||||||||||||||||    
T  37396810 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatcggcaaactataggggggaaaagtgcaattaa 37396711  T
Q  145 gccta 149  Q
    |||||    
T  37396710 gccta 37396706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 56 - 147
Target Start/End: Complemental strand, 37752176 - 37752084
Alignment:
Q  56 aaaaagatggggtgcaaaatagctcaattaaaaat-atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||||||||||||||||| ||||||  |||||  ||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  37752176 aaaaagatggggtgcaaaatcgctcaaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaacataggggggaaaagtgcaattaagcc 37752084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 163
Target Start/End: Complemental strand, 16929043 - 16928926
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||||||||||||||||||  ||||||  ||||| | ||||||||||||||||||||| |||||||||| ||||| ||||||||||||    
T  16929043 cagaaagggggcaaaaagatggggtgcaaaac-gctcaaa-aaaaagagggggtgcaaaatcgcacaattagcaaaagatagggggggaaagtgcaatta 16928946  T
Q  144 agcctatattatatatgtat 163  Q
    |||||| || || |||||||    
T  16928945 agcctaaataatttatgtat 16928926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 148
Target Start/End: Complemental strand, 41662622 - 41662520
Alignment:
Q  46 agaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 145  Q
    |||||||| |||||  || ||| ||||||| ||||  |||||| |||| |||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  41662622 agaaagggagaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaag 41662523  T
Q  146 cct 148  Q
    |||    
T  41662522 cct 41662520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 148
Target Start/End: Original strand, 43246139 - 43246231
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaat-atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||||||||||||||| ||||||  |||||  | ||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||    
T  43246139 aaaagatggggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcacacaattagcaaaagataggggggaaaagtgcaattaagcct 43246231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 17431389 - 17431286
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| |||| |||| ||||||||||||||| ||||  |||||||||||||||||||||||    
T  17431389 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgaaaaatcgcacaattgacaaactatatgggggaaaagtgcaattaa 17431290  T
Q  145 gcct 148  Q
    ||||    
T  17431289 gcct 17431286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 12281390 - 12281480
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||| ||||| ||||| ||||||  ||||| | |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  12281390 aaaagatagggtggaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcc 12281480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 16929207 - 16929296
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||||||||||||||| | ||||  ||||| | ||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||    
T  16929207 aaaagatggggtgcaaaatcgttcaaa-aaaaagagggggtgcaaaatcgcacaattagcaaaagataggggagaaaagtgcaattaagcc 16929296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 24473445 - 24473343
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||||||| |||  || ||| ||||||| ||||| |||||| |||||||||||||||| |||||||||||||  ||| |||| ||||||||||||||    
T  24473445 cagaaaggggggaaactatagggggcaaaatcgctcatttaaaattatggggtgcaaaatcacacaattggcaaactatagggggaaaaagtgcaattaa 24473346  T
Q  145 gcc 147  Q
    |||    
T  24473345 gcc 24473343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 37752381 - 37752470
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||| |||||||||||||| ||||||  ||||| | |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  37752381 aaaatatggggtgcaaaatcgctcaaa-aaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 37752470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 22851896 - 22851976
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaatt 84  Q
    ||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||| | |||||||||| || |||||    
T  22851896 atcagacacatcatcactaaaacacat-gggggcctccaaatcagaaagggggaaaaagacgaggtgcaaaatcgcacaatt 22851976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 45 - 149
Target Start/End: Original strand, 6199048 - 6199152
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| |||||| |||||||||||||||||||||||  ||| ||  |||||||||||||||    
T  6199048 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactatagggaagaaaagtgcaattaa 6199147  T
Q  145 gccta 149  Q
    |||||    
T  6199148 gccta 6199152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 45 - 153
Target Start/End: Original strand, 24473720 - 24473828
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || |||  |||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| ||  |||||||||||||||    
T  24473720 cagaaagggggaaaactataggggacaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggatgaaaagtgcaattaa 24473819  T
Q  145 gcctatatt 153  Q
    |||| ||||    
T  24473820 gcctttatt 24473828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 45 - 149
Target Start/End: Original strand, 34498507 - 34498611
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||| || ||| ||| |||  ||   |||||| |||||||||||||||||||||||| |||||  ||| |||||||||||||||||||    
T  34498507 cagaaagggggaaaaatatagggggcataatctcttgtttaaaactatggggtgcaaaatcgcacaatttgcaaactataggggggaaaagtgcaattaa 34498606  T
Q  145 gccta 149  Q
    |||||    
T  34498607 gccta 34498611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 25438857 - 25438794
Alignment:
Q  82 attaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 145  Q
    ||||||| ||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||    
T  25438857 attaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 25438794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 7 - 145
Target Start/End: Complemental strand, 15442903 - 15442765
Alignment:
Q  7 gacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcg 106  Q
    |||| ||||||| ||||||||   |||| || | ||| || |||| ||||||| ||| ||||||||||| || |  ||||||| |||||||||||||||     
T  15442903 gacatatcatcagtaaaacacgcaggggaccataaaatcacaaagcgggaaaaggatagggtgcaaaatcgcacgtttaaaaacatggggtgcaaaatca 15442804  T
Q  107 cacaattggcaaaagatatgggggaaaagtgcaattaag 145  Q
    |||||||||| ||| ||| ||||||||| ||||||||||    
T  15442803 cacaattggcgaaatataggggggaaaaatgcaattaag 15442765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 37397097 - 37397199
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||||||||||   || ||| ||||| | ||||  |||||| ||||||| ||||||||||||||||||||||  ||| |||||||||||||||||||    
T  37397097 cagaaagggggaaatctatagggggcaaagtcgctcgtttaaaactatggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 37397196  T
Q  145 gcc 147  Q
    |||    
T  37397197 gcc 37397199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 147
Target Start/End: Original strand, 3463894 - 3463999
Alignment:
Q  43 accagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaat 141  Q
    |||||||| |||| |||||||||||||||||||| ||||||   |||  |  |||||||| ||||||||||| |||||| ||| ||||||||||||||||    
T  3463894 accagaaacggggtaaaaagatggggtgcaaaatcgctcaaaacaaaggagagggtgcaagatcgcacaattagcaaaatataggggggaaaagtgcaat 3463993  T
Q  142 taagcc 147  Q
    ||||||    
T  3463994 taagcc 3463999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 149
Target Start/End: Complemental strand, 6198760 - 6198656
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||| ||||||||  || ||| ||||||| ||||  |||||| ||| |||||||||||||||||||||| | |  ||||||| |||||||||||||||    
T  6198760 cagaaatggggaaaactatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggaagaccatatgggagaaaagtgcaattaa 6198661  T
Q  145 gccta 149  Q
    |||||    
T  6198660 gccta 6198656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 148
Target Start/End: Original strand, 18020053 - 18020141
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||  |||||||||  ||| ||||||||||||||||||    
T  18020053 aaaagatggggtgcaaaatcgctcaaa-aaaaagagggggtgcaaaatcgcacaattaacaaaagata--gggtaaaagtgcaattaagcct 18020141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 20861590 - 20861693
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||  ||||||| ||||  |||||| |||||||||||||||||||||||||||| |  ||| |||| |||| |||||||||    
T  20861590 cagaaagggggaaaattataggaggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcagactatagggggaaaaaatgcaattaa 20861689  T
Q  145 gcct 148  Q
    ||||    
T  20861690 gcct 20861693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 34313852 - 34313765
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||| ||||||||||| ||||||  ||||| | |||||||||||||||||||||  |||||||||  |||||||||||||||||||||    
T  34313852 aaaagatagggtgcaaaatcgctcaaa-aaaaagagggggtgcaaaatcgcacaattaacaaaagata--ggggaaaagtgcaattaagcc 34313765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 65 - 144
Target Start/End: Complemental strand, 34498204 - 34498125
Alignment:
Q  65 gggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||| ||||||||||||||    
T  34498204 gggtgcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaa 34498125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 57 - 148
Target Start/End: Complemental strand, 41662197 - 41662106
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    |||||||  |||||||||| ||| ||  ||||| | |||||||||||||||||||||  |||||||||||||| ||| ||||||||||||||    
T  41662197 aaaagatatggtgcaaaatcgcttaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagatatggggaaaatgtgcaattaagcct 41662106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 23123400 - 23123338
Alignment:
Q  85 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||| |||||||| ||||||||||||||| ||||||||| | ||||||||||||||||||||    
T  23123400 aaaaagatggggtgtaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaagcc 23123338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 74936 - 75015
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagata 124  Q
    ||||||||||| |||||||||||||||||||| ||| ||  ||||| | ||||||||||||||||||||| ||||||||||    
T  74936 cagaaagggggcaaaaagatggggtgcaaaatcgctaaaa-aaaaagagggggtgcaaaatcgcacaattagcaaaagata 75015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 37752217 - 37752154
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgc 107  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| |||||||||||||||||    
T  37752217 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgc 37752154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 9623580 - 9623502
Alignment:
Q  69 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  |||  | | |||||||||||||||||    
T  9623580 gcaaaattgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagtgagaaaaagtgcaattaagcc 9623502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 15444637 - 15444703
Alignment:
Q  83 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    |||||| |||||||||||||||||||||||||| |||  ||| |||| |||||||||||||| ||||    
T  15444637 ttaaaactatggggtgcaaaatcgcacaattggtaaattatagggggaaaaagtgcaattaaaccta 15444703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 145
Target Start/End: Complemental strand, 74773 - 74688
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 145  Q
    |||||||| |||||||||| ||| ||  ||||| | ||||||||||||||||||||| |||||||||  | ||||||||||||||||||    
T  74773 aaaagatgaggtgcaaaatcgctaaa--aaaaaaaaggggtgcaaaatcgcacaattagcaaaagat-ggagggaaaagtgcaattaag 74688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 150
Target Start/End: Complemental strand, 33748073 - 33747981
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctat 150  Q
    ||||||| ||||||||||| ||||||  ||||| |  || ||||||||| ||||||| ||||||||||| ||  ||||||||||||||||||||    
T  33748073 aaaagatagggtgcaaaatcgctcaaaaaaaaagagcggatgcaaaatcacacaattagcaaaagatat-ggaaaaaagtgcaattaagcctat 33747981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 57 - 144
Target Start/End: Original strand, 9465838 - 9465923
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||| |||||||||||||| ||||||  ||||| | |||||||||||||||||||||  |||||||||  ||| |||| |||||||||    
T  9465838 aaaaaatggggtgcaaaattgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagata--gggaaaaaatgcaattaa 9465923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 2856583 - 2856524
Alignment:
Q  90 tatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    ||||||||||||||||||||||||||||||  ||| || |||||| | ||||||||||||    
T  2856583 tatggggtgcaaaatcgcacaattggcaaactatagggaggaaaattacaattaagccta 2856524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 18020013 - 18019915
Alignment:
Q  47 gaaagggggaaaaagatggggtgcaaaatagctcaattaaaa--atatggggtgcaaaatcgcacaatt-ggcaaaagatatgggggaaaagtgcaatt 142  Q
    |||| |||| ||||||||||||||||||| ||||||  | ||  | | ||||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  18020013 gaaaaggggcaaaagatggggtgcaaaatcgctcaaaaagaagaagagggggtgcaaaatcgcacaattaggaaaaagatagggggcaaaagtgcaatt 18019915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 25439102 - 25439176
Alignment:
Q  69 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||| ||||||||||||||    
T  25439102 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactata-ggggaaaaagtgcaattaa 25439176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 43162539 - 43162588
Alignment:
Q  93 ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  43162539 ggggtgcaaaatcgcacgattgacaaaagata-gggggaaaagtgcaatta 43162588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 23123517 - 23123567
Alignment:
Q  93 ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 145  Q
    ||||||||||||||||||||| |||||||||| ||||  ||||||||||||||    
T  23123517 ggggtgcaaaatcgcacaattagcaaaagataagggg--aaagtgcaattaag 23123567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 43162325 - 43162234
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggg--gtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||| ||||||||||| ||||||  ||||| |  ||  ||||||||||||||||||  ||||| ||| ||||||||||||||||||||||    
T  43162325 aaaagatagggtgcaaaatcgctcaaaaaaaaaaagaggaggtgcaaaatcgcacaattaacaaaatata-gggggaaaagtgcaattaagcc 43162234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 140
Target Start/End: Complemental strand, 7127702 - 7127660
Alignment:
Q  97 tgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaa 140  Q
    ||||||||||||||||| |||||||||| |||||||||||||||    
T  7127702 tgcaaaatcgcacaattagcaaaagata-gggggaaaagtgcaa 7127660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 58 - 148
Target Start/End: Complemental strand, 9465693 - 9465606
Alignment:
Q  58 aaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    |||||| ||||||||||| ||| ||  ||||| | |||||  ||||| ||||||||| ||||||||| || ||||||||||||||||||||    
T  9465693 aaagatagggtgcaaaatcgctaaa--aaaaagacggggtataaaattgcacaattgacaaaagata-ggaggaaaagtgcaattaagcct 9465606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 148
Target Start/End: Original strand, 11007800 - 11007883
Alignment:
Q  65 gggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||||||| ||| ||  ||||| | |||| |||||||| ||||||||| |||||||| |  || |||||||||||||||||    
T  11007800 gggtgcaaaatcgctaaaaaaaaaagaaggggagcaaaatctcacaattggtaaaagataagaagggaaagtgcaattaagcct 11007883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 146
Target Start/End: Original strand, 22851958 - 22852009
Alignment:
Q  95 ggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 146  Q
    |||||||||||||||||||||||||||||| ||  ||||| | |||||||||    
T  22851958 ggtgcaaaatcgcacaattggcaaaagatagggatgaaaaatacaattaagc 22852009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 33727057 - 33727156
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||  |||||||||||||||||| |||||  |||  || |||||||| ||||||    
T  33727057 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgaagtgcaaaatcgcacaattagcaaactataaaggagaaaagtgtaattaa 33727156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 155
Target Start/End: Complemental strand, 3463729 - 3463634
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatattat 155  Q
    |||||||| |||| ||||| ||| ||  |||||| ||||||||||||| ||||||||  ||||||||| ||||||||| || ||||||||||| |||||    
T  3463729 aaaagatgaggtgtaaaatcgctaaaaaaaaaat-tggggtgcaaaattgcacaattaacaaaagata-gggggaaaa-tgtaattaagcctaaattat 3463634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 16169275 - 16169174
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||||| |||||  || ||| | ||||| ||||  |||||| |||| |||||||||| ||||||||||||||  ||| ||  |||||||||||||||    
T  16169275 cagaaagggagaaaactatagggggaaaaattgctcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggatgaaaagtgcaattaa 16169177  T
Q  145 gcc 147  Q
    |||    
T  16169176 gcc 16169174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 22786892 - 22786838
Alignment:
Q  95 ggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    ||||||||||| ||||||| | |||||||| |||| |||||||||||||| ||||    
T  22786892 ggtgcaaaatcacacaattagtaaaagatagggggaaaaagtgcaattaaaccta 22786838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 765999 - 766053
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaatt 113  Q
    ||||||| ||||||||||| ||||||  ||||| | |||||||||||||||||||||    
T  765999 aaaagatagggtgcaaaatcgctcaa--aaaaagagggggtgcaaaatcgcacaatt 766053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 142
Target Start/End: Original strand, 7127789 - 7127877
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaa--atatggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 142  Q
    ||||||||||||||||||| |||||   ||||  | ||||||||||||||| | ||||| || |||||||| |||| ||||||||||||    
T  7127789 aaaagatggggtgcaaaatcgctcataaaaaagaagatggggtgcaaaatcacgcaattagcaaaaagatagggggtaaaagtgcaatt 7127877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 15156062 - 15156111
Alignment:
Q  94 gggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 142  Q
    |||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  15156062 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 15156111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 155
Target Start/End: Original strand, 767720 - 767767
Alignment:
Q  107 cacaattggcaaaagatatgggggaaaagtgcaattaagcctatattat 155  Q
    |||||||  ||||||||| ||||||||||||||||||||||||| ||||    
T  767720 cacaattaacaaaagata-gggggaaaagtgcaattaagcctatgttat 767767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 142
Target Start/End: Complemental strand, 37752290 - 37752242
Alignment:
Q  95 ggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 142  Q
    ||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  37752290 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 37752242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 109; Significance: 8e-55; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 3 - 147
Target Start/End: Original strand, 6705 - 6849
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  6705 atcagacacatcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaa 6804  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||||||||||||||||||| ||| ||||| ||||||||||||    
T  6805 atcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 6849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 6295 - 6152
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||    
T  6295 atcagacacatcatcactaaaacacatggggg-cctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcatttaaaaatatggggtgtaaa 6197  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||||||| ||||||||||  || ||||||||||||||||||    
T  6196 atcgcacaattagcaaaagatagaggtgaaaagtgcaattaagcc 6152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 107; Significance: 1e-53; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 3 - 153
Target Start/End: Original strand, 18817521 - 18817671
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    ||||||||||||||| ||||||||||||||||| || |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  18817521 atcagacacatcatcgctaaaacacatggggggtctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaa 18817620  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatatt 153  Q
    |||||||||||||||||||||| ||| |||||||||||||||||| |||||    
T  18817621 atcgcacaattggcaaaagataggggtgaaaagtgcaattaagccaatatt 18817671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 11350948 - 11350807
Alignment:
Q  6 agacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatc 105  Q
    ||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||     
T  11350948 agacacatcatcactaaaacacatggggggcctccaaatcaaaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaat- 11350850  T
Q  106 gcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||    
T  11350849 gcacaattggcaaaagataggggtgaaaaatgcaattaagcct 11350807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 18817096 - 18816950
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||||||||||||||||||||| || |||||||||| |||| |||||||||||||||||||||| |||||||| ||||  ||||||| ||||||||||||    
T  18817096 atcagacacatcatcactaaaatacgtggggggcctccaaatcagaaagggggaaaaagatgggatgcaaaatcgctcgtttaaaaacatggggtgcaaa 18816997  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    |||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  18816996 atcgcacaattggcaaaagataggggtgaaaaatgcaattaagccta 18816950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 11351339 - 11351483
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||||||||||||| ||||||||||||||||| ||| |||| || |||||||||||| ||||||||| ||||| ||||  ||||||||||||||||||||    
T  11351339 atcagacacatcattactaaaacacatggggg-cctccaaatcataaagggggaaaa-gatggggtgtaaaatcgctcgtttaaaaatatggggtgcaaa 11351436  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    |||||||||||||||||||||| | | ||||||||||||||| ||||    
T  11351437 atcgcacaattggcaaaagataggagtgaaaagtgcaattaaaccta 11351483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 18433118 - 18433015
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  18433118 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaatta 18433019  T
Q  144 agcc 147  Q
    ||||    
T  18433018 agcc 18433015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 45 - 149
Target Start/End: Complemental strand, 25115860 - 25115755
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | ||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  25115860 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaaaagggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaatta 25115761  T
Q  144 agccta 149  Q
    ||||||    
T  25115760 agccta 25115755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 45 - 149
Target Start/End: Complemental strand, 25174952 - 25174847
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | ||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  25174952 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaaaagggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaatta 25174853  T
Q  144 agccta 149  Q
    ||||||    
T  25174852 agccta 25174847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 26020553 - 26020449
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| ||||||||| |||||||||| ||||||  ||||| ||||||||||||||||||||||| |||||||||| || |||||||||||||||    
T  26020553 cagaaagggggcaaaaagatgcggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagatagggaggaaaagtgcaatta 26020454  T
Q  144 agcct 148  Q
    |||||    
T  26020453 agcct 26020449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 45 - 149
Target Start/End: Complemental strand, 12498669 - 12498565
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  12498669 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 12498570  T
Q  145 gccta 149  Q
    |||||    
T  12498569 gccta 12498565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 149
Target Start/End: Complemental strand, 22429021 - 22428932
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    ||||||||||||||||||| ||||||  ||||| ||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||    
T  22429021 aaaagatggggtgcaaaattgctcaa--aaaaagatggggtgcaaaatcgcacaattagcaaaagata-ggggggaaagtgcaattaagccta 22428932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 45 - 149
Target Start/End: Original strand, 12498880 - 12498984
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| |||   |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  12498880 cagaaagggggaaaactatagggggcaaaatcgcttgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 12498979  T
Q  145 gccta 149  Q
    |||||    
T  12498980 gccta 12498984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 57 - 149
Target Start/End: Original strand, 25175115 - 25175207
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    ||||||| ||||||||||| ||||||  ||||| | |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  25175115 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccta 25175207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 45 - 149
Target Start/End: Original strand, 26571116 - 26571220
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||| ||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  26571116 cagaaaggaggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 26571215  T
Q  145 gccta 149  Q
    |||||    
T  26571216 gccta 26571220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 57 - 148
Target Start/End: Original strand, 18433281 - 18433371
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  18433281 aaaagatggggtgcaaaatcgctcaaa-aaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 18433371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 19514915 - 19515018
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| |||||||| |||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  19514915 cagaaagggggaaaactatagggggcaaaataactcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 19515014  T
Q  145 gcct 148  Q
    ||||    
T  19515015 gcct 19515018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 22729392 - 22729492
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  22729392 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaattata-gggggaaaagtgcaattaa 22729490  T
Q  145 gc 146  Q
    ||    
T  22729491 gc 22729492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 34576968 - 34576870
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| |||||||| |||||||||||||| |||||||||| ||||| ||||||||||||    
T  34576968 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaa-aaaaagatggggtgtaaaatcgcacaattagcaaaagata-ggggggaaagtgcaatta 34576871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 3888379 - 3888239
Alignment:
Q  5 cagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaat 104  Q
    |||||||||||||||||||   ||||||   || | ||| |||||||||||||||  || ||| ||||||| ||||  |||||| |||||||||||||||    
T  3888379 cagacacatcatcactaaatgtcatggga--ccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaat 3888282  T
Q  105 cgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    || ||||||||||||  ||| |||||||| |||||||||||||    
T  3888281 cgtacaattggcaaactataggggggaaatgtgcaattaagcc 3888239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 21207328 - 21207229
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||||| |||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  21207328 cagaaagggtgaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 21207229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 34577129 - 34577217
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||||||||||||||| ||||||  ||||| ||||||||||||||| ||||||| |||||||||| |||| |||||||||||||||||    
T  34577129 aaaagatggggtgcaaaatcgctcaaa-aaaaagatggggtgcaaaatcacacaattagcaaaagata-ggggaaaaagtgcaattaagcc 34577217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 45 - 149
Target Start/End: Complemental strand, 26570831 - 26570727
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || |||  |||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||| ||||||    
T  26570831 cagaaagggggaaaactataggggacaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgtaattaa 26570732  T
Q  145 gccta 149  Q
    |||||    
T  26570731 gccta 26570727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 45 - 149
Target Start/End: Original strand, 43464144 - 43464247
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| |||| |||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  43464144 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaa 43464242  T
Q  145 gccta 149  Q
    |||||    
T  43464243 gccta 43464247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 3888614 - 3888713
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||| ||||||||||||  ||| | |||||||||||||||||    
T  3888614 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaattataagagggaaaagtgcaattaa 3888713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 19514628 - 19514525
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagata-tgggggaaaagtgcaatta 143  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  |||  ||||| ||||||||||||    
T  19514628 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggggaaagtgcaatta 19514529  T
Q  144 agcc 147  Q
    ||||    
T  19514528 agcc 19514525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 149
Target Start/End: Original strand, 25116023 - 25116117
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatgggg--tgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    ||||||| ||||||||||| ||||||  ||||| | ||||  |||||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  25116023 aaaagatagggtgcaaaatcgctcaaaaaaaaagaaggggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccta 25116117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 5187805 - 5187886
Alignment:
Q  68 tgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    |||||||| ||||||  ||||||| |||||||||||| ||||||||  ||||||||| |||| |||||||||||||||||||    
T  5187805 tgcaaaatcgctcaaaaaaaaatagggggtgcaaaattgcacaattaacaaaagataaggggcaaaagtgcaattaagccta 5187886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 144
Target Start/End: Complemental strand, 2817244 - 2817152
Alignment:
Q  52 ggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||||| || ||| ||||||| ||||  |||||| |||||| |||||||||||||||||||||||  ||| || ||||||||||||||||    
T  2817244 ggggaaaaatatagggggcaaaatcgctcgtttaaaattatgggatgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaa 2817152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 149
Target Start/End: Original strand, 22429188 - 22429251
Alignment:
Q  85 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    ||||| ||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||    
T  22429188 aaaaagatggggtgcaaaatcgcacaattagcaaaagata-gggggaaaaatgcaattaagccta 22429251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 37610279 - 37610196
Alignment:
Q  69 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatatt 153  Q
    ||||||| ||||  |||||| |||||||||||||||| |||||||||||||  ||| ||||||||||||||||||||||| ||||    
T  37610279 gcaaaatcgctcgtttaaaactatggggtgcaaaatcacacaattggcaaactata-gggggaaaagtgcaattaagcctttatt 37610196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 37780397 - 37780314
Alignment:
Q  69 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatatt 153  Q
    ||||||| ||||  |||||| |||||||||||||||| |||||||||||||  ||| ||||||||||||||||||||||| ||||    
T  37780397 gcaaaatcgctcgtttaaaactatggggtgcaaaatcacacaattggcaaactata-gggggaaaagtgcaattaagcctttatt 37780314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 56 - 149
Target Start/End: Original strand, 16466708 - 16466798
Alignment:
Q  56 aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    |||||||||||||||||||| ||||||  |||| |    | ||||||||||||||||| |||||| ||| ||||||||||||||||||||||||    
T  16466708 aaaaagatggggtgcaaaatcgctcaaaaaaaagtt---gatgcaaaatcgcacaattagcaaaatataggggggaaaagtgcaattaagccta 16466798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 150
Target Start/End: Complemental strand, 31569970 - 31569904
Alignment:
Q  83 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctat 150  Q
    ||||||| ||| |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||    
T  31569970 ttaaaaacatgaggtgcaaaatcgcacaattgacaaaagata-gggggaaaagtgcaattaaacctat 31569904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 34147462 - 34147565
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| || | |||||||||||||||||||| ||||  ||| |||| ||||||||||||||    
T  34147462 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactacgaggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaa 34147561  T
Q  145 gcct 148  Q
    ||||    
T  34147562 gcct 34147565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 42919406 - 42919304
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||| |||| ||| ||||||||||| ||||  ||||||| ||| |||| |||||||||||||||| |||| ||| |||| ||||| ||||||||    
T  42919406 cagaaaggggaaaaatgatagggtgcaaaatcgctcgtttaaaaacatgtggtgaaaaatcgcacaattggaaaaatata-ggggaaaaagagcaattaa 42919308  T
Q  145 gcct 148  Q
    ||||    
T  42919307 gcct 42919304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 43463857 - 43463759
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||||| |||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  |||  ||||||||||||||||||    
T  43463857 cagaaagggagaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactata-aggggaaaagtgcaattaa 43463759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 9665792 - 9665879
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||||||||||||||| ||||||  |||||||  ||||||||||| |||||||| |||||||||| |||||||||||| |||||||||    
T  9665792 aaaagatggggtgcaaaatcgctcaa-aaaaaatagtgggtgcaaaat-gcacaattagcaaaagata-gggggaaaagtggaattaagcc 9665879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 119
Target Start/End: Original strand, 11316926 - 11317000
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaa 119  Q
    ||||||| |||||||  || ||| ||||||| ||||| ||||||  |||||||||||||||||||||||||||||    
T  11316926 cagaaagagggaaaactatagggggcaaaatcgctcatttaaaacaatggggtgcaaaatcgcacaattggcaaa 11317000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 95 - 141
Target Start/End: Complemental strand, 16726130 - 16726084
Alignment:
Q  95 ggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaat 141  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||    
T  16726130 ggtgcaaaatcgcacaattggcaaaagatagggggcaaaagtgcaat 16726084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 10098931 - 10099007
Alignment:
Q  83 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatattatatatg 160  Q
    |||||| ||||||||||||||||||||||||| ||||  ||| || |||||||||||||||| |||||  ||||||||    
T  10098931 ttaaaactatggggtgcaaaatcgcacaattgacaaactata-ggaggaaaagtgcaattaaacctattatatatatg 10099007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 85 - 144
Target Start/End: Complemental strand, 9665617 - 9665560
Alignment:
Q  85 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||| |||||||||||||| |||||||| ||||||||||  ||||||||||||||||||    
T  9665617 aaaaagatggggtgcaaaattgcacaattagcaaaagata--ggggaaaagtgcaattaa 9665560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 33324838 - 33324894
Alignment:
Q  93 ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    ||||||||||||| |||||||| ||||||||| |||  |||||||||||||||||||    
T  33324838 ggggtgcaaaatcacacaattgacaaaagataggggaaaaaagtgcaattaagccta 33324894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 34147241 - 34147140
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| || ||||||||||||||||||||||  | ||  |||  |||||||||||||||||    
T  34147241 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactacggggtgcaaaatcgcacaattg--ataaactataagggaaaagtgcaattaa 34147144  T
Q  145 gcct 148  Q
    ||||    
T  34147143 gcct 34147140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 25940623 - 25940520
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||||| |||||  || ||| ||||||| ||||  |||||| ||| ||||||||||||||||||||| ||||  ||| |||  |||| |||||||||    
T  25940623 cagaaagggtgaaaactatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattgacaaactataggggaaaaaaatgcaattaa 25940524  T
Q  145 gcct 148  Q
    ||||    
T  25940523 gcct 25940520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 41383167 - 41383221
Alignment:
Q  93 ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||| |||||||||||    
T  41383167 ggggtgcaaaatcgcacaattagcaaaaaata-gggggaaaagttcaattaagcct 41383221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 22729108 - 22729008
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||  ||||||||||||||||||  ||||  ||| |||||||||||||||||||    
T  22729108 cagaaagggggaaaactataggg-gcaaaatcgctcgtttaaaactatgaagtgcaaaatcgcacaatttacaaactata-gggggaaaagtgcaattaa 22729011  T
Q  145 gcc 147  Q
    |||    
T  22729010 gcc 22729008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 147
Target Start/End: Complemental strand, 23011170 - 23011079
Alignment:
Q  56 aaaaagatggggtgcaaaatagctcaattaaaaatatgg--ggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||| ||||||||||||||  |||||  ||||| ||||  ||||||||||||||||||| ||||||||||  |||||||| ||||||||||||    
T  23011170 aaaaaaatggggtgcaaaatctctcaaaaaaaaa-atggtgggtgcaaaatcgcacaattagcaaaagata-aggggaaaaatgcaattaagcc 23011079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 147
Target Start/End: Original strand, 37780718 - 37780796
Alignment:
Q  69 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||| ||||  ||||||  ||| ||||||||||||||||||| |||||  ||| ||||||||||| ||||||||||    
T  37780718 gcaaaatcgctcgtttaaaacaatgaggtgcaaaatcgcacaattagcaaactataggggggaaaagtacaattaagcc 37780796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 10098597 - 10098514
Alignment:
Q  69 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatat 152  Q
    ||||||| ||||  |||||| ||| || |||||||||||||||||| ||||  ||| | || ||||||||||||||||| ||||    
T  10098597 gcaaaatcgctcgtttaaaactataggatgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaagccaatat 10098514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 144
Target Start/End: Complemental strand, 11316812 - 11316717
Alignment:
Q  49 aagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||  || ||| ||||||| ||||  |||||| ||| || |||||||| | ||||||||||||  ||| | |||||||||||||||||    
T  11316812 aagggggaaaactatagggggcaaaattgctcgtttaaaattataggatgcaaaattgtacaattggcaaactataggagggaaaagtgcaattaa 11316717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 147
Target Start/End: Original strand, 12441320 - 12441364
Alignment:
Q  101 aaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||||    
T  12441320 aaatcgcacaattagcaaaagata--ggggaaaagtgcaattaagcc 12441364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 146
Target Start/End: Original strand, 25940972 - 25941067
Alignment:
Q  51 gggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 146  Q
    |||||||||  || ||| ||||||| ||||  |||||| |||||| |||||||||||| ||||  ||||  ||| | |||||||||||||||||||    
T  25940972 gggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcataattaacaaactataggagggaaaagtgcaattaagc 25941067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 149
Target Start/End: Original strand, 41072167 - 41072269
Alignment:
Q  46 agaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 145  Q
    ||||||||||||||  || ||| ||||||| ||||  |||||| ||| ||||||||||||| ||||||| ||||  ||| || ||||||||| ||||||     
T  41072167 agaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgtacaattgacaaactata-ggaggaaaagtgtaattaaa 41072265  T
Q  146 ccta 149  Q
    ||||    
T  41072266 ccta 41072269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 41382945 - 41382891
Alignment:
Q  94 gggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    ||||||||||||||||||||  ||||||||| ||||||||| ||||||||| ||||    
T  41382945 gggtgcaaaatcgcacaattaacaaaagataggggggaaaa-tgcaattaaaccta 41382891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 144
Target Start/End: Complemental strand, 9869639 - 9869563
Alignment:
Q  64 ggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||| ||||||  ||||| |  |||||||||||||||||||| |||||  ||| || ||||||||||||||||    
T  9869639 ggggtgcaaaatcgctcaa--aaaaaaagtgggtgcaaaatcgcacaattagcaaa--atagggaggaaaagtgcaattaa 9869563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 9869688 - 9869790
Alignment:
Q  47 gaaagggggaaaaagatggggtgcaaaatagctcaattaaaaat----atggggtgcaaaatcgcacaattgg-caaaagatatgggggaaaagtgcaat 141  Q
    ||||||||| ||| ||||||||||||||| ||| ||  |||||     | |||||||||||||||||||||||  |||||| | |||| |||||||||||    
T  9869688 gaaagggggcaaatgatggggtgcaaaatcgctaaaaaaaaaaagaagagggggtgcaaaatcgcacaattggtaaaaagacagggggcaaaagtgcaat 9869787  T
Q  142 taa 144  Q
    |||    
T  9869788 taa 9869790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 25115934 - 25115885
Alignment:
Q  94 gggtgcaaaatcgcacaattggcaaaa-gatatgggggaaaagtgcaatt 142  Q
    |||||||||||||||||||| |||||| |||| |||| ||||||||||||    
T  25115934 gggtgcaaaatcgcacaattagcaaaatgataaggggcaaaagtgcaatt 25115885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 25175026 - 25174977
Alignment:
Q  94 gggtgcaaaatcgcacaattggcaaaa-gatatgggggaaaagtgcaatt 142  Q
    |||||||||||||||||||| |||||| |||| |||| ||||||||||||    
T  25175026 gggtgcaaaatcgcacaattagcaaaatgataaggggcaaaagtgcaatt 25174977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 34577040 - 34576991
Alignment:
Q  96 gtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||||| || |||||||| |||| ||||||||||||||    
T  34577040 gtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattaa 34576991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 2817551 - 2817626
Alignment:
Q  69 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 145  Q
    ||||||| ||||  |||||| ||| || || |||||||||||||| |||||  ||| ||||||||||||||||||||    
T  2817551 gcaaaatcgctcgtttaaaactattggatgtaaaatcgcacaattcgcaaactata-gggggaaaagtgcaattaag 2817626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 142
Target Start/End: Complemental strand, 18433191 - 18433143
Alignment:
Q  95 ggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 142  Q
    ||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  18433191 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 18433143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 23011261 - 23011309
Alignment:
Q  97 tgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||||||| |||||||| |||| |||| |||||||||    
T  23011261 tgcaaaatcgcacaattggctaaaagatagggggcaaaattgcaattaa 23011309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 8e-49; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 3 - 153
Target Start/End: Complemental strand, 49284552 - 49284403
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||||||||||||||||||||   |||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  49284552 atcagacacatcatcactaaatt-catggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaa 49284454  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatatt 153  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  49284453 atcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctttatt 49284403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 6002381 - 6002237
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    ||||||||||||||||||||||  |||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  6002381 atcagacacatcatcactaaaattcatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaa 6002282  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||| |||||||| ||||||||| ||| ||||||||||||||||||    
T  6002281 atcacacaattgacaaaagataggggtgaaaagtgcaattaagcc 6002237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 49284965 - 49285088
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||   ||||||| ||||||||||||    
T  49284965 atcagacacatcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgcttgtttaaaaacatggggtgcaaa 49285064  T
Q  103 atcgcacaattggcaaaagatatg 126  Q
    ||||||||||||||||||||||||    
T  49285065 atcgcacaattggcaaaagatatg 49285088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 145
Target Start/End: Original strand, 6002803 - 6002946
Alignment:
Q  3 atcagacacatcatcactaaaacacatgggggg-ccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaa 101  Q
    ||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||| |||||||||| ||||  ||||||| |||||||||||    
T  6002803 atcagacacatcatcactaaaacacatgggggggcctccaaatcagaaagggggaaaaagatgaggtgcaaaatcgctcgtttaaaaacatggggtgcaa 6002902  T
Q  102 aatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 145  Q
    |||||||||||||  |||||||| ||  ||||||||||||||||    
T  6002903 aatcgcacaattgcgaaaagatagggatgaaaagtgcaattaag 6002946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 47955409 - 47955305
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  47955409 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaatta 47955310  T
Q  144 agcct 148  Q
    |||||    
T  47955309 agcct 47955305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 28633822 - 28633708
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||| ||||||||||||  ||| |||||||||||||||||||    
T  28633822 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaactataagggggaaaagtgcaattaa 28633723  T
Q  145 gcctatattatatat 159  Q
    |||||||||||||||    
T  28633722 gcctatattatatat 28633708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 39 - 157
Target Start/End: Complemental strand, 31848003 - 31847885
Alignment:
Q  39 tcaaaccagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtg 137  Q
    ||||||||||||||||| |||||||| ||||||||||| ||||||  ||||||||||| |||||||| |||||||| |||||||||| ||||| ||||||    
T  31848003 tcaaaccagaaagggggcaaaaagatcgggtgcaaaatcgctcaaa-aaaaatatgggatgcaaaattgcacaattagcaaaagataagggggtaaagtg 31847905  T
Q  138 caattaagcctatattatat 157  Q
    ||||||| ||| ||||||||    
T  31847904 caattaaacctttattatat 31847885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 39691952 - 39692055
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||||||||||||||| |||||||||||  | |  ||||||| |||||||||||||||||||||||| ||||| ||| |||||||||||||||||||    
T  39691952 cagaaagggggaaaaagatagggtgcaaaatcacacgtttaaaaacatggggtgcaaaatcgcacaattgacaaaatataggggggaaaagtgcaattaa 39692051  T
Q  145 gcct 148  Q
    ||||    
T  39692052 gcct 39692055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 9347228 - 9347126
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  9347228 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 9347129  T
Q  145 gcc 147  Q
    |||    
T  9347128 gcc 9347126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 48105068 - 48105170
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  48105068 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaa 48105167  T
Q  145 gcc 147  Q
    |||    
T  48105168 gcc 48105170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 22149653 - 22149750
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||| |||||||||||||||||||| ||| ||  ||||| | | ||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  22149653 cagaaaggggcaaaaagatggggtgcaaaatcgctaaa--aaaaaaaggaggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 22149750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 45 - 149
Target Start/End: Original strand, 32162995 - 32163099
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  ||  || ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  32162995 cagaaagggggaaaactataaggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 32163094  T
Q  145 gccta 149  Q
    |||||    
T  32163095 gccta 32163099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 48191295 - 48191366
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaat 75  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  48191295 atcagacacatcatcactaaaacacatggggggcctccaaatcagaaaggggg-aaaagatggggtgcaaaat 48191366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 8108985 - 8109048
Alignment:
Q  85 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8108985 aaaaagatggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 8109048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 27172217 - 27172116
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  27172217 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaa 27172119  T
Q  145 gcc 147  Q
    |||    
T  27172118 gcc 27172116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 50615573 - 50615674
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||| |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  50615573 cagaaagggggaaaactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaa 50615671  T
Q  145 gcc 147  Q
    |||    
T  50615672 gcc 50615674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 50623401 - 50623502
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||| |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  50623401 cagaaagggggaaaactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaa 50623499  T
Q  145 gcc 147  Q
    |||    
T  50623500 gcc 50623502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 17518555 - 17518653
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| ||||||||||| |||||||| ||||||  ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17518555 cagaaagggggcaaaaagatggg-tgcaaaattgctcaaa-aaaaagagggggtgcaaaatcgcacaattggcaaaagata-gggggaaaagtgcaatta 17518651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 48190886 - 48190805
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaatt 84  Q
    ||||||||||||||||||||||  |||||||||||| ||||  |||||||||||||||||||||||||||||| || |||||    
T  48190886 atcagacacatcatcactaaaattcatggggggcctccaaattagaaagggggaaaaagatggggtgcaaaatcgcacaatt 48190805  T

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Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 153
Target Start/End: Original strand, 9347503 - 9347610
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||| ||||||||||||||  ||| ||||| |||||||||||||    
T  9347503 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactata-ggggggaaagtgcaattaa 9347601  T
Q  145 gcctatatt 153  Q
    |||||||||    
T  9347602 gcctatatt 9347610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 149
Target Start/End: Original strand, 26815071 - 26815175
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| |||||||||||||||||||||||||  |||  ||| |||||||||||||||||||    
T  26815071 cagaaagggggaaaattatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaa 26815170  T
Q  145 gccta 149  Q
    |||||    
T  26815171 gccta 26815175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 149
Target Start/End: Complemental strand, 44911127 - 44911023
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  || |||  |||||||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  44911127 cagaaagggggaaaactatagggggcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaaatatagggggggaaagtgcaattaa 44911028  T
Q  145 gccta 149  Q
    |||||    
T  44911027 gccta 44911023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 149
Target Start/End: Original strand, 47955572 - 47955664
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    ||||||| ||||||||||| ||||||  ||||| | |||||||||||||||||||||   |||||||| ||||||||||||||||||||||||    
T  47955572 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaagccta 47955664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 50526424 - 50526524
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||| ||||||||||||||    
T  50526424 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaa 50526523  T
Q  145 g 145  Q
    |    
T  50526524 g 50526524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 20480269 - 20480167
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  20480269 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaa 20480171  T
Q  145 gcct 148  Q
    ||||    
T  20480170 gcct 20480167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 156
Target Start/End: Original strand, 28634109 - 28634220
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| | ||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  28634109 cagaaagggggaaaactatagggggcaaaatcgatcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 28634208  T
Q  145 gcctatattata 156  Q
     |||||| ||||    
T  28634209 acctataatata 28634220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 41083011 - 41082909
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||||||||||||||||||| ||| ||  ||||| | ||| |||||||||||||||||||||||||||| |||| |||||| ||||||    
T  41083011 cagaaagggggcaaaaagatggggtgcaaaatcgctaaaa-aaaaagaggggatgcaaaatcgcacaattggcaaaagatagggggaaaaagtacaatta 41082913  T
Q  144 agcc 147  Q
    ||||    
T  41082912 agcc 41082909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 46823945 - 46823846
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||| ||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  46823945 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggagtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 46823846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 48104780 - 48104681
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  48104780 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgccaaactataggggggaaaagtgcaattaa 48104681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 50430033 - 50430132
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||||| |||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  50430033 cagaaagggagaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 50430132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 13918548 - 13918446
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| | || ||||||||||||||    
T  13918548 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggaggaaaaagtgcaattaa 13918449  T
Q  145 gcc 147  Q
    |||    
T  13918448 gcc 13918446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 26814796 - 26814694
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| || ||||||||||||||||    
T  26814796 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaa 26814697  T
Q  145 gcc 147  Q
    |||    
T  26814696 gcc 26814694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 48190833 - 48190771
Alignment:
Q  85 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  48190833 aaaaagatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 48190771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 150
Target Start/End: Original strand, 999477 - 999581
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| |||||| ||||||||||||||||||||||   ||| |||||||||||||||||||    
T  999477 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggttgcaaaatcgcacaattggcaatctata-gggggaaaagtgcaattaa 999575  T
Q  145 gcctat 150  Q
    ||||||    
T  999576 gcctat 999581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 48191348 - 48191412
Alignment:
Q  86 aaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctat 150  Q
    |||| ||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||    
T  48191348 aaaagatggggtgcaaaatcgcaccattggcaaaagataggggtgaaaagtgcaattaagcctat 48191412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 151
Target Start/End: Original strand, 31848158 - 31848250
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctata 151  Q
    ||||||||||||||||||| |||| |  ||||| | |||||||||||||| ||||||  ||||||||| ||| ||||||||||||||||||||||    
T  31848158 aaaagatggggtgcaaaatcgctcga--aaaaagagggggtgcaaaatcgtacaattaacaaaagataggggagaaaagtgcaattaagcctata 31848250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 42611287 - 42611188
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||  ||||||| ||||  |||||| |||| |||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  42611287 cagaaagggggaaaactataggaggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaa 42611188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 63 - 148
Target Start/End: Original strand, 13589628 - 13589713
Alignment:
Q  63 tggggtgcaaaatagctcaattaaaaat-atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||||||||| ||||||  |||||  | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  13589628 tggggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagata-gggggaaaagtgcaattaagcct 13589713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 19008696 - 19008806
Alignment:
Q  39 tcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgc 138  Q
    ||||| |||||||||||||||  || ||| ||||||| || |  || ||| |||||||||||||||||||||||||  |||  ||| |||||||||||||    
T  19008696 tcaaatcagaaagggggaaaattatagggggcaaaattgcacgttttaaactatggggtgcaaaatcgcacaattgcgaaactataggggggaaaagtgc 19008795  T
Q  139 aattaagccta 149  Q
    |||||||||||    
T  19008796 aattaagccta 19008806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 52 - 144
Target Start/End: Complemental strand, 1176932 - 1176839
Alignment:
Q  52 ggggaaaaagatggggtgcaaaatagct-caattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||| ||||||||||||||||||| ||| |||  ||||| | |||||||||||| ||||||||| ||||||||| |||| ||||||||||||||    
T  1176932 ggggcaaaagatggggtgcaaaatcgctacaaaaaaaaagagggggtgcaaaattgcacaattgacaaaagatagggggtaaaagtgcaattaa 1176839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 150
Target Start/End: Complemental strand, 8108810 - 8108718
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctat 150  Q
    ||||||| ||||||||||| ||||||  ||||| | |||||||||||||||||||||  ||||||||| || |||||||||||||||| |||||    
T  8108810 aaaagatagggtgcaaaatcgctcaaaaaaaaa-agggggtgcaaaatcgcacaattaacaaaagatagggaggaaaagtgcaattaaacctat 8108718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 154
Target Start/End: Complemental strand, 22149490 - 22149396
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatatta 154  Q
    ||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||  |||| |||| ||||||||||||||||||||||| |||||    
T  22149490 aaaagatggggtgcaaaatcgctcaaa-aaaaagagggggtgcaaaatcgcacaattaccaaa-gata-gggggaaaagtgcaattaagcctttatta 22149396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 6703870 - 6703954
Alignment:
Q  69 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatatt 153  Q
    ||||||| ||||  |||||| ||||||||||||||| ||||||||||||||  ||| ||| |||||||||||||||||| |||||    
T  6703870 gcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggggagaaaagtgcaattaagccaatatt 6703954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 149
Target Start/End: Complemental strand, 17518392 - 17518301
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    ||||||| ||||||||||| ||||||  ||||| | |||||||||||||||||||||  |||||||||  ||||||| |||||||||||||||    
T  17518392 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagata-aggggaaaggtgcaattaagccta 17518301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 148
Target Start/End: Original strand, 46824233 - 46824333
Alignment:
Q  48 aaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||| ||||||||||||||  ||| | || |||||||||||||||||    
T  46824233 aaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggaggaaaaagtgcaattaagcc 46824332  T
Q  148 t 148  Q
    |    
T  46824333 t 46824333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 20371304 - 20371406
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatgggg-tgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||  || ||| ||||||| ||||  |||||| ||||||| |||||||||||||||||||||||  ||| ||||||||||||||||||    
T  20371304 cagaaagggggtaaactatagggggcaaaattgctcgtttaaaactatgggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaatta 20371402  T
Q  144 agcc 147  Q
    ||||    
T  20371403 agcc 20371406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 27172494 - 27172596
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  ||||||  ||||| |||||||||||||||||||||||  | | |||||||||||||||||||    
T  27172494 cagaaagggggaaaactataggg-gcaaaatcgctcgtttaaaacaatgggatgcaaaatcgcacaattggcaaagtacaggggggaaaagtgcaattaa 27172592  T
Q  145 gcct 148  Q
    ||||    
T  27172593 gcct 27172596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 21687127 - 21687025
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||| ||||||  || ||| ||||||| ||||  |||||| |||||||||||||||  |||||||| ||||  ||| |||||||||||||||||||    
T  21687127 cagaaaggaggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaattacacaattgacaaactataggggggaaaagtgcaattaa 21687028  T
Q  145 gcc 147  Q
    |||    
T  21687027 gcc 21687025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 49317853 - 49317752
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| | ||||| ||||  |||||| |||||| |||||||| ||||||||||||||  ||| |||||||||||||||||||    
T  49317853 cagaaagggggaaaactatagggggtaaaatcgctcgtttaaaactatgggatgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaa 49317755  T
Q  145 gcc 147  Q
    |||    
T  49317754 gcc 49317752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 49318118 - 49318219
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  || ||| |||||| |||||||||||||||||||||||  ||| ||||| |||||||||||||    
T  49318118 cagaaagggggaaaactatagggggcaaaatcgctcgttttaaactatgggatgcaaaatcgcacaattggcaaactata-ggggggaaagtgcaattaa 49318216  T
Q  145 gcc 147  Q
    |||    
T  49318217 gcc 49318219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 148
Target Start/End: Original strand, 4692423 - 4692488
Alignment:
Q  83 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    |||||| ||||||||||||||| ||||||||||||||  ||| |||| ||||||||||||||||||    
T  4692423 ttaaaactatggggtgcaaaattgcacaattggcaaactatagggggaaaaagtgcaattaagcct 4692488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 149
Target Start/End: Complemental strand, 6703562 - 6703458
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||| ||||||||  || ||| ||||||| ||||  |||||| |||| ||||||||||||||||||||| |||  ||| | || ||||||||||||||    
T  6703562 cagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggtaaactataggaggaaaaagtgcaattaa 6703463  T
Q  145 gccta 149  Q
    |||||    
T  6703462 gccta 6703458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 20480602 - 20480665
Alignment:
Q  83 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||| ||| ||||||||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  20480602 ttaaaactatagggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 20480665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 146
Target Start/End: Original strand, 13918857 - 13918920
Alignment:
Q  83 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 146  Q
    |||||| |||| |||||||||||||||||||||||||  ||| || ||||||||||||||||||    
T  13918857 ttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaagc 13918920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 24671338 - 24671283
Alignment:
Q  65 gggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaa 120  Q
    ||||||||||| ||||||||||||  |||| |||||||||||||||||||||||||    
T  24671338 gggtgcaaaatcgctcaattaaaaggatggagtgcaaaatcgcacaattggcaaaa 24671283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 41083211 - 41083269
Alignment:
Q  93 ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatat 152  Q
    ||||||||||||||||||| |  ||||||||| |||||||||||||||||||||||||||    
T  41083211 ggggtgcaaaatcgcacaactaacaaaagata-gggggaaaagtgcaattaagcctatat 41083269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 999189 - 999115
Alignment:
Q  69 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||| ||||  |||||| |||||| |||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  999189 gcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaa 999115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 39690847 - 39690792
Alignment:
Q  94 gggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    ||||||||||||||||||||||| ||| ||| |||| |||||||||| ||||||||    
T  39690847 gggtgcaaaatcgcacaattggccaaatatagggggaaaaagtgcaactaagccta 39690792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 42611566 - 42611665
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||| ||||  || ||| ||||||| |||   |||||| |||| |||||||||||||||||||| ||||  ||| ||| |||||||||||||||    
T  42611566 cagaaaggggaaaaactatagggggcaaaatcgcttgtttaaaactatgaggtgcaaaatcgcacaattgacaaactataggggagaaaagtgcaattaa 42611665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 148
Target Start/End: Complemental strand, 50429734 - 50429655
Alignment:
Q  69 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||| ||||  |||||| |||| ||||||||||||||||||| |||||  |||  |||||||||| |||||||||||    
T  50429734 gcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattagcaaattataaaggggaaaagtacaattaagcct 50429655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 148
Target Start/End: Complemental strand, 33085809 - 33085670
Alignment:
Q  7 gacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcg 106  Q
    |||| ||||||| ||||||||   | ||||| | ||| |||||||| |||||| |||| |||||||||| | ||  ||||| ||  |||||||||||||     
T  33085809 gacagatcatcagtaaaacacccagagggccataaaatcagaaaggaggaaaaggatgaggtgcaaaatcgttcgtttaaacat--ggggtgcaaaatca 33085712  T
Q  107 cacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
     ||||||| ||||| ||| || |||||||| |||||||||||    
T  33085711 aacaattgacaaaatatagggtggaaaagtacaattaagcct 33085670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 50615289 - 50615239
Alignment:
Q  98 gcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||||||||||||| ||||  ||| |||||||||||||||||||||||    
T  50615289 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 50615239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 50623117 - 50623067
Alignment:
Q  98 gcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||||||||||||| ||||  ||| |||||||||||||||||||||||    
T  50623117 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 50623067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 154
Target Start/End: Original strand, 1177018 - 1177079
Alignment:
Q  93 ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatatta 154  Q
    |||||||||||| |||||||| || ||||||| || |||||||||||||||| |||| ||||    
T  1177018 ggggtgcaaaattgcacaattagcgaaagatagggaggaaaagtgcaattaaacctagatta 1177079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 147
Target Start/End: Complemental strand, 1176805 - 1176717
Alignment:
Q  56 aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||||| ||||||||||| ||| ||  |||||   ||| ||||||||||||||||| |||||| ||| ||||| ||||||||||||||||    
T  1176805 aaaaagatagggtgcaaaatcgctaaa--aaaaaagagggatgcaaaatcgcacaattagcaaaatata-ggggggaaagtgcaattaagcc 1176717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 148
Target Start/End: Complemental strand, 20371116 - 20371039
Alignment:
Q  69 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||| ||||  |||||| ||||||||||||||| ||||||||| ||||   ||| |||| |||||||||||||||||    
T  20371116 gcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattgacaaa--ctatagggggaaagtgcaattaagcct 20371039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 21687457 - 21687520
Alignment:
Q  83 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||| |||| ||| |||||||||||||||||||||  ||| ||||||||||||| ||||||||    
T  21687457 ttaaaactatgaggtacaaaatcgcacaattggcaaattata-gggggaaaagtgctattaagcc 21687520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 144
Target Start/End: Complemental strand, 31848119 - 31848019
Alignment:
Q  46 agaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatgggg-tgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatta 143  Q
    ||||| |||| |||| |||||||||||||| ||||||  ||||  |  ||| |||||||||||||||||||| ||||||||  ||| |||||||||||||    
T  31848119 agaaatggggcaaaacatggggtgcaaaatcgctcaaaaaaaagaagagggatgcaaaatcgcacaattggcaaaaagatagagggcaaaagtgcaatta 31848020  T
Q  144 a 144  Q
    |    
T  31848019 a 31848019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 149
Target Start/End: Original strand, 44911389 - 44911493
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||| ||||||  || ||| ||||||| ||||  || |||  || ||||||||||||||||||||||||||  ||| |||| |||| |||||||||    
T  44911389 cagaaaggaggaaaactatagggggcaaaatcgctcgttttaaacaatagggtgcaaaatcgcacaattggcaaactatagggggaaaaaatgcaattaa 44911488  T
Q  145 gccta 149  Q
     ||||    
T  44911489 accta 44911493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 19007796 - 19007734
Alignment:
Q  85 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    |||| ||| ||| ||||||||||||||||||||||  ||| ||||| |||||||||||||||||    
T  19007796 aaaactatagggggcaaaatcgcacaattggcaaactata-ggggggaaagtgcaattaagcct 19007734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 46056991 - 46056904
Alignment:
Q  52 ggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 146  Q
    |||| ||||||| ||||||||||| ||||||  |||||     |||||||||||||| |||| ||||||||||  |||| |||||||||||||||    
T  46056991 ggggcaaaagatagggtgcaaaattgctcaaaaaaaaa-----ggtgcaaaatcgcaaaattagcaaaagata--gggggaaagtgcaattaagc 46056904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 146
Target Start/End: Original strand, 47498493 - 47498547
Alignment:
Q  91 atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 146  Q
    ||||||||||||| |||||||||| ||||  ||| |||||||||||||||||||||    
T  47498493 atggggtgcaaaaccgcacaattgacaaactata-gggggaaaagtgcaattaagc 47498547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 48313792 - 48313847
Alignment:
Q  93 ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    |||||||||||| |||||||| ||||||||||  ||| |||||| |||||||||||    
T  48313792 ggggtgcaaaattgcacaattagcaaaagataatgggaaaaagtacaattaagcct 48313847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 22149580 - 22149630
Alignment:
Q  95 ggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||||||||||||||| || |||||||| |||| ||||||||||||||    
T  22149580 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattaa 22149630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 8108899 - 8108948
Alignment:
Q  94 gggtgcaaaatcgcacaattggcaaaa-gatatgggggaaaagtgcaatt 142  Q
    ||||| |||||||||||||| |||||| ||||||||| ||||||||||||    
T  8108899 gggtgtaaaatcgcacaattagcaaaaagatatggggcaaaagtgcaatt 8108948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 17518481 - 17518530
Alignment:
Q  94 gggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 142  Q
    |||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  17518481 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 17518530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 47498363 - 47498301
Alignment:
Q  83 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||| |||||| |||||||| ||||||||||||||   ||| |||| ||||||||||||||||    
T  47498363 ttaaaactatgggatgcaaaattgcacaattggcaaa--ctatagggggaaagtgcaattaagcc 47498301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 50949569 - 50949622
Alignment:
Q  97 tgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctat 150  Q
    |||||||||||||||||| ||||  ||| ||||| |||||||||||| ||||||    
T  50949569 tgcaaaatcgcacaattgacaaactatagggggggaaagtgcaattatgcctat 50949622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 119
Target Start/End: Complemental strand, 32162793 - 32162757
Alignment:
Q  83 ttaaaaatatggggtgcaaaatcgcacaattggcaaa 119  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  32162793 ttaaaactatggggtgcaaaattgcacaattggcaaa 32162757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 49318433 - 49318496
Alignment:
Q  83 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||| |||||| ||||||||||||||||||  |||  ||| ||||||||| ||||||||||||    
T  49318433 ttaaaactatgggatgcaaaatcgcacaattgataaactata-gggggaaaaatgcaattaagcc 49318496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 1e-41; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 1928344 - 1928489
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||| ||| ||||||||||   |||  ||||||||||||||||||||    
T  1928344 atcagacacatcatcactaaaacatatgggggcccttcaaaccagaaaaggggaaaaggatagggtgcaaaaccactcgtttaaaaatatggggtgcaaa 1928443  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    |||||||||||||||||||||| || |||||| ||||||||| ||||    
T  1928444 atcgcacaattggcaaaagatagggaggaaaa-tgcaattaaaccta 1928489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 20968971 - 20969073
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20968971 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaaaa-ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaatta 20969069  T
Q  144 agcc 147  Q
    ||||    
T  20969070 agcc 20969073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 42 - 148
Target Start/End: Original strand, 47871070 - 47871176
Alignment:
Q  42 aaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatat-ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaa 140  Q
    ||||||||| |||||||||||||||||||||||| ||||||  |||||  | ||||||||||||||||||||| |||||||||| |||||||||||||||    
T  47871070 aaccagaaaaggggaaaaagatggggtgcaaaatcgctcaaaaaaaaaagtgggggtgcaaaatcgcacaattagcaaaagata-gggggaaaagtgcaa 47871168  T
Q  141 ttaagcct 148  Q
    ||||||||    
T  47871169 ttaagcct 47871176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 45 - 150
Target Start/End: Complemental strand, 48159999 - 48159894
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  48159999 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 48159900  T
Q  145 gcctat 150  Q
    ||||||    
T  48159899 gcctat 48159894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 8314155 - 8314013
Alignment:
Q  5 cagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaat 104  Q
    |||||| ||||||  ||||||||   ||||||| | ||| ||||||||||||||| ||| ||||||||||| || |  ||||||| || |||||||||||    
T  8314155 cagacagatcatcggtaaaacacgcagggggccataaaatcagaaagggggaaaatgatagggtgcaaaatcgcacgtttaaaaacattgggtgcaaaat 8314056  T
Q  105 cgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||||||| ||||| ||| ||| ||||||||||||||||||    
T  8314055 cgcacaattgacaaaatataggggagaaaagtgcaattaagcc 8314013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 10293711 - 10293608
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||| ||||||||| |||  |||| ||||||||    
T  10293711 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattgacaaaagataggggaaaaaaatgcaatta 10293612  T
Q  144 agcc 147  Q
    ||||    
T  10293611 agcc 10293608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 18875155 - 18875245
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||||||||||||||| ||||||  ||||| | |||||||||||||| |||||| |||||||||| |||| |||||||||||||||||    
T  18875155 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgtacaattagcaaaagatagggggcaaaagtgcaattaagcc 18875245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 46 - 147
Target Start/End: Original strand, 10348752 - 10348853
Alignment:
Q  46 agaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 145  Q
    ||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||||| || |||||||||||||||    
T  10348752 agaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatatgaggaaaaagtgcaattaag 10348851  T
Q  146 cc 147  Q
    ||    
T  10348852 cc 10348853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 28702417 - 28702278
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaa 102  Q
    ||||||||||||||||| |||| |||| |||| |||||||| ||||||||||  ||| ||| | |||||||||  ||||||||||||||||| |||||||    
T  28702417 atcagacacatcatcaccaaaa-acatagggg-ccttcaaatcagaaagggg--aaaggattgtgtgcaaaatcactcaattaaaaatatggagtgcaaa 28702322  T
Q  103 atcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||| ||||| ||||||||| | || ||||||| |||||||||    
T  28702321 atcgcataattgacaaaagata-gaggaaaaagtgaaattaagcc 28702278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 57 - 148
Target Start/End: Complemental strand, 20968808 - 20968717
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||| ||||||||||| ||||||  ||||| | |||||||||||||||||||||  ||||||||| |||||||| ||||||||||||||    
T  20968808 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaggtgcaattaagcct 20968717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 27238852 - 27238951
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  |||  ||||||||||||||||||    
T  27238852 cagaaagggggaaaactatagggagcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaa 27238951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 40848622 - 40848520
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||| ||||||||||||||||||||  ||| |||||||||||||||||||    
T  40848622 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgtaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaa 40848524  T
Q  145 gcct 148  Q
    ||||    
T  40848523 gcct 40848520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 53687990 - 53687887
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| | ||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  53687990 cagaaagggggaaaactatagggggtaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 53687891  T
Q  145 gcct 148  Q
    ||||    
T  53687890 gcct 53687887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 10293873 - 10293963
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||| ||||||||||| ||||||   |||| | |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  10293873 aaaagatagggtgcaaaatcgctcaaaacaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 10293963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 42673248 - 42673349
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  42673248 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaa 42673346  T
Q  145 gcc 147  Q
    |||    
T  42673347 gcc 42673349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 48160285 - 48160387
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||| ||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| ||||| |||||||||||||    
T  48160285 cagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggggaaagtgcaattaa 48160384  T
Q  145 gcc 147  Q
    |||    
T  48160385 gcc 48160387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 147
Target Start/End: Original strand, 24485413 - 24485513
Alignment:
Q  46 agaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 145  Q
    |||||||||||| |  || ||| ||||||| ||||| |||||| ||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||    
T  24485413 agaaagggggaatactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattggcaaactata-gggagaaaagtgcaattaag 24485511  T
Q  146 cc 147  Q
    ||    
T  24485512 cc 24485513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 150
Target Start/End: Original strand, 40848913 - 40849018
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||||| |||||  || ||| ||||||| |||   |||||| ||||||||||||||||||||||||||||||  |||  ||||||||||||||||||    
T  40848913 cagaaagggtgaaaactatagggggcaaaatcgcttgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaa 40849012  T
Q  145 gcctat 150  Q
    ||||||    
T  40849013 gcctat 40849018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 45 - 149
Target Start/End: Complemental strand, 27238567 - 27238463
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||| ||||||||||||||||||||||||||  ||| | ||||||||| |||||||    
T  27238567 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaactataggagggaaaagtacaattaa 27238468  T
Q  145 gccta 149  Q
    |||||    
T  27238467 gccta 27238463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 31 - 147
Target Start/End: Complemental strand, 42673093 - 42672978
Alignment:
Q  31 gggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatggggg 130  Q
    ||||||| | ||| || ||||||||||||  || ||| ||||||| | ||  |||||| ||||||||||||||||||||||||||||||  ||| |||||    
T  42673093 gggggccataaaatcataaagggggaaaactatagggggcaaaatcgatcgtttaaaactatggggtgcaaaatcgcacaattggcaaactata-ggggg 42672995  T
Q  131 aaaagtgcaattaagcc 147  Q
    |||||||||||||||||    
T  42672994 aaaagtgcaattaagcc 42672978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 45 - 150
Target Start/End: Complemental strand, 9026835 - 9026733
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||||||||||||||||||||||||||| ||||||  ||||  | |||||||||||| ||||||||  ||||||||| || |||||| |||||||||    
T  9026835 cagaaagggggaaaaagatggggtgcaaaatcgctcaa--aaaataaaggggtgcaaaattgcacaattaacaaaagata-ggaggaaaaatgcaattaa 9026739  T
Q  145 gcctat 150  Q
     |||||    
T  9026738 acctat 9026733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 17372387 - 17372298
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||||||||||||||| ||||||  ||||| | ||||||||||||||||||||| |||||| ||| |||| ||| |||||||||||||    
T  17372387 aaaagatggggtgcaaaatcgctcaaa-aaaaacagggggtgcaaaatcgcacaattagcaaaaaatagggggaaaaggtgcaattaagcc 17372298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 47666287 - 47666389
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  || |||  |||||||||||||| ||||||||||||||  ||| |||||||||||||||||||    
T  47666287 cagaaagggggaaaactatagggggcaaaatcgctcgttttaaacaatggggtgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaa 47666386  T
Q  145 gcc 147  Q
    |||    
T  47666387 gcc 47666389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 22429260 - 22429159
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || |||  |||||| ||||  |||||| ||| ||||||||| ||||||||||||||||| ||| ||| |||||||||||||||    
T  22429260 cagaaagggggaaaactataggggacaaaatcgctcgtttaaaactattgggtgcaaagtcgcacaattggcaaaatataggggagaaaagtgcaattaa 22429161  T
Q  145 gc 146  Q
    ||    
T  22429160 gc 22429159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 1927885 - 1927815
Alignment:
Q  3 atcagacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaat 75  Q
    ||||| |||||||||||||||| ||||||||| ||||||||||||||| |||||||||||| |||||||||||    
T  1927885 atcaggcacatcatcactaaaatacatggggg-ccttcaaaccagaaa-ggggaaaaagatagggtgcaaaat 1927815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 45060863 - 45060930
Alignment:
Q  85 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatat 152  Q
    ||||| || ||||| |||||||||||||| |||||||||| ||| |||||||||||||||||||||||    
T  45060863 aaaaagatagggtgtaaaatcgcacaattagcaaaagataggggtgaaaagtgcaattaagcctatat 45060930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 1927834 - 1927772
Alignment:
Q  85 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||| || ||||||||||||||| ||||||||||||||| |||||||| |||||||||||||    
T  1927834 aaaaagatagggtgcaaaatcgcataattggcaaaagataggggggaaaggtgcaattaagcc 1927772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 52 - 144
Target Start/End: Original strand, 17372433 - 17372525
Alignment:
Q  52 ggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaattaa 144  Q
    |||| ||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||||| |||||||| || | |||||||| |||||    
T  17372433 ggggcaaaagatggggtgcaaaattgctcaaa-aaaaagagggggtgcaaaatcgcacaattggcaaaaagatagggtgcaaaagtgccattaa 17372525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 21895720 - 21895655
Alignment:
Q  85 aaaaatatggggtgcaaaatcgcacaattggcaaaagata-tgggggaaaagtgcaattaagccta 149  Q
    ||||| ||||||||||||||| |||||||||||||| ||| ||||| |||||||||||||||||||    
T  21895720 aaaaagatggggtgcaaaatcacacaattggcaaaacatagtggggaaaaagtgcaattaagccta 21895655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 3353191 - 3353128
Alignment:
Q  83 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||| ||||||||||||||||||||||||| ||||  ||| ||||||||||||||||||||||    
T  3353191 ttaaaactatggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaagcc 3353128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 150
Target Start/End: Complemental strand, 18874935 - 18874879
Alignment:
Q  94 gggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctat 150  Q
    |||||||||||||||||||| |||||||||| |||| |||||||||||| |||||||    
T  18874935 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattgagcctat 18874879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 26007259 - 26007176
Alignment:
Q  69 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatatt 153  Q
    ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| ||||||||| ||||||||||||| ||||    
T  26007259 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaa-tgcaattaagcctttatt 26007176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 149
Target Start/End: Original strand, 26007571 - 26007675
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||  ||||||||||| ||||||||||||  ||| |||| ||||||||||||||    
T  26007571 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaattatgaagtgcaaaatcgtacaattggcaaactatagggggaaaaagtgcaattaa 26007670  T
Q  145 gccta 149  Q
     ||||    
T  26007671 accta 26007675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 150
Target Start/End: Complemental strand, 47870910 - 47870820
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaa-tcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctat 150  Q
    ||||||||||||||||||| |||||   ||||| | ||||||||||| ||||| |||| |||||||||| |||| ||||||||||||||||||||    
T  47870910 aaaagatggggtgcaaaatcgctca---aaaaaaaaggggtgcaaaattcgcataattagcaaaagata-ggggaaaaagtgcaattaagcctat 47870820  T

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Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 10771629 - 10771502
Alignment:
Q  18 actaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggca 117  Q
    ||||||||||||||||| ||||||||||||||||||  |||| ||| || || ||||| ||||  ||||||| |||| ||  ||||||||||||||| ||    
T  10771629 actaaaacacatggggg-ccttcaaaccagaaaggga-aaaatgatagg-tgtaaaatcgctcggttaaaaacatggagtaaaaaatcgcacaattgaca 10771533  T
Q  118 aaagatatgggggaaaagtgcaattaagccta 149  Q
    ||||||| |||  |||| ||||||||||||||    
T  10771532 aaagata-gggaaaaaaatgcaattaagccta 10771502  T

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Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 13657536 - 13657445
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatgggg-tgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||||||||||||||| ||||||  ||||| | |||| |||||||||||||||||||||||| |   ||| |||||||| |||||||||    
T  13657536 aaaagatggggtgcaaaatcgctcaaaaaaaaagaggggggtgcaaaatcgcacaattggcaaaaaaatagggagaaaagtgtaattaagcc 13657445  T

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Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 147
Target Start/End: Original strand, 21896474 - 21896564
Alignment:
Q  56 aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||| ||||||||||||||| ||||   |||||  |||||||||||||||||||||||| ||||| ||| |||| |||| ||||||||||||    
T  21896474 aaaatgatggggtgcaaaatcgctcgtataaaaccatggggtgcaaaatcgcacaattgacaaaatata-ggggaaaaaatgcaattaagcc 21896564  T

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Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 9026998 - 9027086
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||||||||||||||||  |||||  ||||| | |||||| ||||| |||||||| |||||||||| |||||||||||| |||||||||    
T  9026998 aaaagatggggtgcaaaatcactcaa-aaaaaacaaggggtgtaaaattgcacaattagcaaaagata-gggggaaaagtgaaattaagcc 9027086  T

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Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 53688255 - 53688356
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| ||||  || ||| ||||| ||||||||||||||||||||||||  ||| ||||  |||||||||||||    
T  53688255 cagaaagggggaaaactatagggggcaaaatcgctcgttttaaactatggagtgcaaaatcgcacaattggcaaactata-ggggagaaagtgcaattaa 53688353  T
Q  145 gcc 147  Q
    |||    
T  53688354 gcc 53688356  T

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Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 3353527 - 3353607
Alignment:
Q  69 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctat 150  Q
    ||||||| ||||  |||||| |||| |||||||||||||||||||||||||  ||| ||||||||||||||| ||| |||||    
T  3353527 gcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaactaaacctat 3353607  T

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Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 144
Target Start/End: Original strand, 13657580 - 13657673
Alignment:
Q  52 ggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaattaa 144  Q
    |||| |||||||||||||||||||  |||||  ||| |   |||||||||||||||||||||||| |||||||| |||  ||||||||||||||    
T  13657580 ggggtaaaagatggggtgcaaaatttctcaaaaaaagaagaggggtgcaaaatcgcacaattggcaaaaagataggggacaaaagtgcaattaa 13657673  T

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Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 42455853 - 42455788
Alignment:
Q  84 taaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    ||||| ||| ||| ||||||||||||||||| ||||  ||| ||||||||||||||||||||||||    
T  42455853 taaaactatagggggcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagccta 42455788  T

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Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 148
Target Start/End: Original strand, 53766569 - 53766634
Alignment:
Q  83 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    |||||| ||| ||||||||||| |||||||| |||||  ||| |||||||||||||||||||||||    
T  53766569 ttaaaactatagggtgcaaaattgcacaatttgcaaactataggggggaaaagtgcaattaagcct 53766634  T

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Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 3644781 - 3644837
Alignment:
Q  91 atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||||||||||||||||||||  ||||| ||| ||||||||| ||||||||||||    
T  3644781 atggggtgcaaaatcgcacaattaacaaaaaataagggggaaaaatgcaattaagcc 3644837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 143
Target Start/End: Complemental strand, 4947362 - 4947263
Alignment:
Q  46 agaaagggggaaaaagatggggtgcaaaatagctcaattaaaaat--atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||| | |||||||||||||||||||| |||| |  ||||||  |  ||||||||||||||||||||  ||||| ||| ||| ||||||||||||||    
T  4947362 agaaaggagcaaaaagatggggtgcaaaattgctcgaaaaaaaatagagagggtgcaaaatcgcacaattaacaaaaaataggggtgaaaagtgcaatta 4947263  T

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Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 21895769 - 21895701
Alignment:
Q  7 gacacatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaat 75  Q
    |||||||||||||||||   |||||||| || | ||| |||||||||| ||||||||||||||||||||    
T  21895769 gacacatcatcactaaatgtcatgggggaccataaaatcagaaaggggaaaaaagatggggtgcaaaat 21895701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 22429548 - 22429647
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||| ||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| || || |||||||||||||    
T  22429548 cagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactata-ggagggaaagtgcaattaa 22429646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 36180656 - 36180555
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || |||  |||||| ||||  |||||| |||||| |||||||||||||||||| ||||   ||| ||||||| ||||||||||    
T  36180656 cagaaagggggaaaactataggggtcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaa--ctataggggaaatgtgcaattaa 36180559  T
Q  145 gcct 148  Q
    ||||    
T  36180558 gcct 36180555  T

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Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 1101182 - 1101237
Alignment:
Q  94 gggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    ||||| ||||||||||||   |||||||||| ||||||||||||||||||||||||    
T  1101182 gggtgaaaaatcgcacaaaaagcaaaagataagggggaaaagtgcaattaagccta 1101237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 8315083 - 8315137
Alignment:
Q  94 gggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    ||||||||||||||||||||| ||||| ||| ||||| ||||||||||||||||||    
T  8315083 gggtgcaaaatcgcacaattgacaaaatata-ggggggaaagtgcaattaagccta 8315137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 14015957 - 14016019
Alignment:
Q  86 aaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    |||| ||||||||||||||||||||||| |||||||||| ||  ||||||||||||||| ||||    
T  14015957 aaaagatggggtgcaaaatcgcacaattagcaaaagata-ggatgaaaagtgcaattaaaccta 14016019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 26540833 - 26540915
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaa 140  Q
    ||||||||||||||||||| ||||||  ||||| | |  ||| |||||||||||||| |||||||||| |||||||| ||||||    
T  26540833 aaaagatggggtgcaaaatcgctcaaaaaaaaaaaggaagtgtaaaatcgcacaattagcaaaagata-gggggaaaggtgcaa 26540915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 53766241 - 53766166
Alignment:
Q  69 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| | || ||||||||||||||    
T  53766241 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaa 53766166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 119
Target Start/End: Complemental strand, 24485123 - 24485049
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaa 119  Q
    |||||||||| ||||  || ||| || |||| ||||  |||||| ||||||||||||||||||||||||||||||    
T  24485123 cagaaaggggaaaaactatagggggcgaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 24485049  T

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Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 36180980 - 36181046
Alignment:
Q  83 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    |||||| |||||||| |||||||||||||||  ||||  ||| || |||||||||||||||||||||    
T  36180980 ttaaaactatggggtacaaaatcgcacaattaacaaactatagggaggaaaagtgcaattaagccta 36181046  T

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Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 42627511 - 42627599
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||| |||||||||||||| |||||   ||||| | ||| ||||||||| ||||||| |||||||||| | ||||||||||||||||||||    
T  42627511 aaaaaatggggtgcaaaatcgctcataaaaaaaga-gggatgcaaaatcacacaattagcaaaagata-gagggaaaagtgcaattaagcc 42627599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 47665963 - 47665909
Alignment:
Q  95 ggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    |||||||||||||||||||| ||||  ||| |||| |||||||||||||||||||    
T  47665963 ggtgcaaaatcgcacaattgacaaactataaggggaaaaagtgcaattaagccta 47665909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 14015824 - 14015923
Alignment:
Q  47 gaaagggggaaaaagatggggtgcaaaatagctcaattaaa-aatatggggtgcaaaatcgcacaattggc-aaaagatatggggg-aaaagtgcaatta 143  Q
    ||||| ||| |||||| |||||||||||| ||||||  ||| || | || ||||||||||||||||||||| |||||||| ||||| |||||||||||||    
T  14015824 gaaagagggcaaaaga-ggggtgcaaaatcgctcaaaaaaagaagagggagtgcaaaatcgcacaattggcaaaaagataggggggcaaaagtgcaatta 14015922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 45060644 - 45060596
Alignment:
Q  99 caaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||||||| |||| ||||||||||  |||||||||||||||||||||    
T  45060644 caaaatcgcataattagcaaaagatagtggggaaaagtgcaattaagcc 45060596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 1100968 - 1100917
Alignment:
Q  94 gggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 145  Q
    ||||| |||||||||||||| |||||||||| || ||| |||||||||||||    
T  1100968 gggtgaaaaatcgcacaatttgcaaaagatagggtggataagtgcaattaag 1100917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 146
Target Start/End: Original strand, 17372560 - 17372645
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 146  Q
    |||||||||||||||||||   | ||  ||||| | ||||||||||||||||||||| | |||  |||| ||||||||||||||||||||    
T  17372560 aaaagatggggtgcaaaatcattaaa--aaaaaaaaggggtgcaaaatcgcacaattagtaaa--atataggggaaaagtgcaattaagc 17372645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 115
Target Start/End: Original strand, 42456171 - 42456217
Alignment:
Q  69 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattgg 115  Q
    ||||||| ||||  |||||| ||||||||||||||||||||||||||    
T  42456171 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgg 42456217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 44008353 - 44008454
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||||| |||||  || ||| | ||||| ||||  |||||| |||| |||||||||| ||||||||||||||  ||| ||  |||||||||||||||    
T  44008353 cagaaagggagaaaactatagggggaaaaattgctcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggatgaaaagtgcaattaa 44008451  T
Q  145 gcc 147  Q
    |||    
T  44008452 gcc 44008454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 10348581 - 10348480
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||| ||||  || |||  |||||| ||||  |||||| |||||| |||||||| | ||||||| ||||  ||| ||| |||||||||||||||    
T  10348581 cagaaaggggaaaaactataggggacaaaatcgctcgtttaaaattatgggatgcaaaattgaacaattgacaaactatacgggagaaaagtgcaattaa 10348482  T
Q  145 gc 146  Q
    ||    
T  10348481 gc 10348480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 147
Target Start/End: Original strand, 13657735 - 13657776
Alignment:
Q  106 gcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||||| |||||||||||| | ||||||||||||||||||    
T  13657735 gcacaattagcaaaagatatgagagaaaagtgcaattaagcc 13657776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 20968897 - 20968946
Alignment:
Q  94 gggtgcaaaatcgcacaattggcaaaa-gatatgggggaaaagtgcaatt 142  Q
    |||||||||||||||||||| |||||| |||| |||| ||||||||||||    
T  20968897 gggtgcaaaatcgcacaattagcaaaatgataaggggcaaaagtgcaatt 20968946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 1101090 - 1101141
Alignment:
Q  93 ggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||||||||| | |||||||| |||| ||||||||||||||    
T  1101090 ggggtgcaaaatcgcacaattgacaaaaagata-ggggcaaaagtgcaattaa 1101141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 17441066 - 17441118
Alignment:
Q  96 gtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||||||||||||||  |||||||||  | |||||| |||||||||||||    
T  17441066 gtgcaaaatcgcacaattaacaaaagatagagaggaaaaatgcaattaagcct 17441118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 142
Target Start/End: Complemental strand, 18875065 - 18875017
Alignment:
Q  95 ggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 142  Q
    ||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  18875065 ggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 18875017  T

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Target: scaffold0110 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 45 - 149
Target Start/End: Original strand, 45758 - 45862
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  45758 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagata-gggggaaaagtgcaatta 45856  T
Q  144 agccta 149  Q
    ||||||    
T  45857 agccta 45862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 148
Target Start/End: Complemental strand, 45626 - 45536
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||| ||||||||||| ||||||  ||||| | || ||||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  45626 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggagtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcct 45536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 1371 - 1474
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  1371 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagatagggggaaaaagtgcaatta 1470  T
Q  144 agcc 147  Q
    ||||    
T  1471 agcc 1474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 1208 - 1118
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||| ||||||||||| ||||||  ||||| | |||||||||||||||||||||  ||||||||| |||| |||||||||||||||||    
T  1208 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagatagggggaaaaagtgcaattaagcc 1118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 1297 - 1346
Alignment:
Q  94 gggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 142  Q
    |||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  1297 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 1346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 51 - 148
Target Start/End: Original strand, 25327 - 25424
Alignment:
Q  51 gggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    |||| |||||||||||||||||||| ||||||  ||||| | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  25327 ggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcct 25424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 25247 - 25295
Alignment:
Q  95 ggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 142  Q
    ||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  25247 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 25295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 64; Significance: 6e-28; HSPs: 3)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 6648 - 6750
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  6648 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagata-gggggaaaagtgcaatta 6746  T
Q  144 agcc 147  Q
    ||||    
T  6747 agcc 6750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 148
Target Start/End: Complemental strand, 6485 - 6393
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaat-atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||||||||||||||| ||| ||  |||||  | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  6485 aaaagatggggtgcaaaatcgctaaaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcct 6393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 6575 - 6623
Alignment:
Q  95 ggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 142  Q
    ||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  6575 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 6623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 62; Significance: 9e-27; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 58 - 147
Target Start/End: Complemental strand, 439019 - 438930
Alignment:
Q  58 aaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    |||||||||||||||||| ||||||  ||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  439019 aaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 438930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 57 - 149
Target Start/End: Original strand, 439165 - 439255
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    ||||||||||||||||||| ||||||  ||||| | ||| ||||||||||||||||| |||||||||| |||| |||||||||||||||||||    
T  439165 aaaagatggggtgcaaaatcgctcaa--aaaaagaggggatgcaaaatcgcacaattagcaaaagataaggggaaaaagtgcaattaagccta 439255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 148
Target Start/End: Original strand, 183611 - 183717
Alignment:
Q  42 aaccagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaa-aatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgca 139  Q
    ||||| |||||||| ||||||||||| |||||||| |||||| |||| || | |||||||||| |||||||||| |||||| ||| ||||||||||||||    
T  183611 aaccataaagggggcaaaaagatggg-tgcaaaatcgctcaaataaagaagagggggtgcaaa-tcgcacaattagcaaaatataggggggaaaagtgca 183708  T
Q  140 attaagcct 148  Q
    |||||||||    
T  183709 attaagcct 183717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 144
Target Start/End: Complemental strand, 183453 - 183367
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||| ||| |||||||||| ||||||  || || |  ||||||||||||| ||||||| ||||||||| |||||||||||||||||||    
T  183453 aaaatatgaggtgcaaaatcgctcaaaaaagaagagagggtgcaaaatcgtacaattgacaaaagata-gggggaaaagtgcaattaa 183367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 144
Target Start/End: Original strand, 183497 - 183592
Alignment:
Q  51 gggggaaaaagatggggtgcaaaatagctcaattaaa-aatatggggtgcaaaatcgcacaattgg-caaaagatatgggggaaaagtgcaattaa 144  Q
    ||||| ||||||| ||||| ||||| ||||||  ||| || | ||| |||||||||||||||||||  |||||||| |||| ||||||||||||||    
T  183497 gggggcaaaagatagggtgaaaaatcgctcaaaaaaataagacgggttgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaattaa 183592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 148
Target Start/End: Complemental strand, 10138 - 10011
Alignment:
Q  21 aaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaa 120  Q
    |||||||||| |||||| || |||||||||||||| ||||||  | || |||||| | ||||||||||  || || |||||||||| |||||||||||||    
T  10138 aaaacacatgaggggccatcgaaccagaaagggggcaaaagagagtgtacaaaatcgttcaattaaaaggattggatgcaaaatcgtacaattggcaaaa 10039  T
Q  121 gatatgggggaaaagtgcaattaagcct 148  Q
    |||| |||| ||||||||||||||||||    
T  10038 gatagggggcaaaagtgcaattaagcct 10011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 185226 - 185328
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||| |||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| || ||||||||||||||||    
T  185226 cagaaagagggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaa 185325  T
Q  145 gcc 147  Q
    |||    
T  185326 gcc 185328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 184941 - 184840
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||  ||||||| ||||  |||||| ||||||||||||||| ||||| ||| ||||  |||  || |||||||||||||||    
T  184941 cagaaagggggaaaactataggtggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacagttgacaaactatagaggagaaaagtgcaattaa 184842  T
Q  145 gc 146  Q
    ||    
T  184841 gc 184840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 432 - 329
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||| ||||||||  || ||| ||||||| ||||  |||||| |||||| |||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  432 cagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 333  T
Q  145 gcct 148  Q
    ||||    
T  332 gcct 329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 147
Target Start/End: Original strand, 739 - 816
Alignment:
Q  69 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||| |||||||||||||||||    
T  739 gcaaaatcgctcgtttaaaattatggggtgcaaaatcgcacaattggcaaactata-ggggaaaaagtgcaattaagcc 816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 20033 - 20104
Alignment:
Q  83 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatatta 154  Q
    |||||| ||||||| ||||||||||||||||| ||||  ||| |||||||||||||||||||||||||||||    
T  20033 ttaaaactatggggggcaaaatcgcacaattgacaaactataagggggaaaagtgcaattaagcctatatta 20104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 158
Target Start/End: Complemental strand, 19698 - 19610
Alignment:
Q  69 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatattatata 158  Q
    ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  |||| |||||||| ||||||||||||| || ||||||    
T  19698 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatat-ggggaaaattgcaattaagcctttaatatata 19610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 38647 - 38750
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||||||||||  || ||| ||||||| | ||  |||| | ||||||||||||||||||||||||||||||  ||| |||| ||||||||||||||    
T  38647 cagaaagggggaaaactatagggggcaaaatcgttcgtttaagactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaa 38746  T
Q  145 gcct 148  Q
    ||||    
T  38747 gcct 38750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 38353 - 38284
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattg 114  Q
    ||||||| |||||||  || ||| ||||||| ||||| |||||| |||||| ||||||||||||||||||    
T  38353 cagaaagagggaaaactatagggggcaaaatcgctcatttaaaactatgggatgcaaaatcgcacaattg 38284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 412024 - 411923
Alignment:
Q  45 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||||||| ||||||||||| ||| ||  ||||| | |||||||||||||||||||||| ||||||||| ||||| ||||||||||||    
T  412024 cagaaagggggcaaaaagatagggtgcaaaatcgcttaaa-aaaaagagggggtgcaaaatcgcacaattgacaaaagata-gggggtaaagtgcaatta 411927  T
Q  144 agcc 147  Q
    ||||    
T  411926 agcc 411923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 10008 - 9904
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatgggg-tgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||| || ||||||||||||||||||||  ||| |||| |||||||||||||    
T  10008 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggggtgaaaaatcgcacaattggcaaactatagggggaaaaagtgcaatta 9909  T
Q  144 agcct 148  Q
    |||||    
T  9908 agcct 9904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 149
Target Start/End: Original strand, 10311 - 10373
Alignment:
Q  85 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 149  Q
    |||| ||| ||||||||||||| ||||||||||||   ||| |||||||||||| ||||||||||    
T  10311 aaaactatagggtgcaaaatcggacaattggcaaa--ctataggggaaaagtgctattaagccta 10373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 152
Target Start/End: Original strand, 17119 - 17214
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatgg-ggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatat 152  Q
    ||||||||||||||||||| ||||||  |||||   || |||||||||| |||||||| |||||||||| |||||||||||||||||||||| ||||    
T  17119 aaaagatggggtgcaaaatcgctcaaaaaaaaaagaggcggtgcaaaattgcacaattagcaaaagata-gggggaaaagtgcaattaagccaatat 17214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 16956 - 16853
Alignment:
Q  45 cagaaaggg-ggaaaaagatggggtgcaaaatagctc--aattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaat 141  Q
    ||||||||| |||||||||||||||||||||| ||||  ||  ||||| | |||||||| |||||||||||| ||||||||||  ||||||||  |||||    
T  16956 cagaaagggaggaaaaagatggggtgcaaaatcgctcaaaaaaaaaaagagggggtgcataatcgcacaattagcaaaagata--ggggaaaaaggcaat 16859  T
Q  142 taagcc 147  Q
    ||||||    
T  16858 taagcc 16853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 50458 - 50560
Alignment:
Q  45 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatgggg-tgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 143  Q
    ||||||||||| |||  || ||| ||||||| ||||  |||||| ||||||| |||||||||||||||||||||||  ||| ||||||||||||||||||    
T  50458 cagaaagggggtaaactatagggggcaaaattgctcgtttaaaactatgggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaatta 50556  T
Q  144 agcc 147  Q
    ||||    
T  50557 agcc 50560  T

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Target: scaffold0069; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 148
Target Start/End: Complemental strand, 50151 - 50074
Alignment:
Q  69 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    ||||||| ||||  |||||| ||||||||||||||| ||||||||| ||||   ||| |||| |||||||||||||||||    
T  50151 gcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattgacaaa--ctatagggggaaagtgcaattaagcct 50074  T

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Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 57 - 153
Target Start/End: Complemental strand, 205774 - 205681
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatatt 153  Q
    |||||||| |||||||||| | ||||  ||||| | ||||||||||||||||||||| |||||||||| ||| ||||| ||||||||||||| ||||    
T  205774 aaaagatgaggtgcaaaatcgttcaa--aaaaagagggggtgcaaaatcgcacaattagcaaaagata-gggagaaaaatgcaattaagcctttatt 205681  T

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Target: scaffold0376 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 7510 - 7454
Alignment:
Q  91 atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 148  Q
    |||||||||||||||||| |||| |||||||||| |||| ||||||||||||||||||    
T  7510 atggggtgcaaaatcgcataattagcaaaagata-ggggaaaaagtgcaattaagcct 7454  T

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Target: scaffold0376; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 147
Target Start/End: Original strand, 7600 - 7653
Alignment:
Q  93 ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||| ||||||||||||||| |||||||||| |||| |||||||||||||||||    
T  7600 ggggtacaaaatcgcacaattagcaaaagata-ggggaaaaagtgcaattaagcc 7653  T

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Target: scaffold1221 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 1566 - 1511
Alignment:
Q  91 atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 147  Q
    ||||||||||||||| |||||||||||||||||| | || |||||||||||||||||    
T  1566 atggggtgcaaaatcacacaattggcaaaagata-gaggaaaaagtgcaattaagcc 1511  T

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Target: scaffold1221; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 144
Target Start/End: Original strand, 1747 - 1834
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaatta-aaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 144  Q
    ||||||| ||||||||||| ||||||  | |||| | | ||||||||||||||||||   ||||||||| |||||||||||||||||||    
T  1747 aaaagatagggtgcaaaatcgctcaaaaagaaaagaggaggtgcaaaatcgcacaataaacaaaagata-gggggaaaagtgcaattaa 1834  T

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Target: scaffold0598 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 6877 - 6927
Alignment:
Q  94 gggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 146  Q
    ||||||||||| ||||||||||||||||||| ||||| |||||||||||||||    
T  6877 gggtgcaaaat-gcacaattggcaaaagata-ggggggaaagtgcaattaagc 6927  T

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Target: scaffold0598; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 6659 - 6604
Alignment:
Q  95 ggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctat 150  Q
    ||||||||||| |||||||  ||||||||| ||||||| |||||||||||| ||||    
T  6659 ggtgcaaaatcacacaattaacaaaagataggggggaacagtgcaattaagtctat 6604  T

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Target: scaffold0035 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 146
Target Start/End: Complemental strand, 73070 - 72967
Alignment:
Q  42 aaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaat 141  Q
    |||||||| || || ||||||||| |||||||||  || ||  ||||| | | |||||||||| |||||||| ||||||||||  |||||||| ||||||    
T  73070 aaccagaatggcggcaaaagatggagtgcaaaatcacttaaa-aaaaagaggcggtgcaaaattgcacaattagcaaaagataaaggggaaaaatgcaat 72972  T
Q  142 taagc 146  Q
    |||||    
T  72971 taagc 72967  T

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Target: scaffold0035; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 144
Target Start/End: Complemental strand, 73177 - 73089
Alignment:
Q  57 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaattaa 144  Q
    |||||||| |||||||||| || |||  || || | |||||||||||||||||| ||| | |||||||| |||  ||||||||||||||    
T  73177 aaaagatgaggtgcaaaatcgcccaaaaaagaacagggggtgcaaaatcgcacagttgacaaaaagataggggacaaaagtgcaattaa 73089  T

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