View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21674_high_5 (Length: 307)

Name: NF21674_high_5
Description: NF21674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21674_high_5
NF21674_high_5
[»] chr4 (75 HSPs)
chr4 (1-276)||(56505540-56505821)
chr4 (9-133)||(50678775-50678899)
chr4 (1-129)||(50679350-50679478)
chr4 (1-139)||(56506500-56506638)
chr4 (1-126)||(36096401-36096526)
chr4 (1-130)||(43051178-43051307)
chr4 (1-130)||(36095816-36095944)
chr4 (1-126)||(43050610-43050735)
chr4 (27-129)||(16555768-16555871)
chr4 (1-131)||(45830124-45830252)
chr4 (1-128)||(11529169-11529296)
chr4 (27-131)||(3930431-3930535)
chr4 (27-131)||(28196344-28196448)
chr4 (27-134)||(4239318-4239425)
chr4 (27-130)||(9023632-9023735)
chr4 (27-130)||(28196725-28196828)
chr4 (27-132)||(9380693-9380798)
chr4 (27-128)||(25161879-25161980)
chr4 (27-131)||(39744417-39744521)
chr4 (27-129)||(9380307-9380409)
chr4 (27-129)||(32703602-32703704)
chr4 (27-126)||(13198606-13198707)
chr4 (39-130)||(13198870-13198961)
chr4 (27-130)||(32703224-32703327)
chr4 (39-125)||(49178779-49178866)
chr4 (40-130)||(18077167-18077257)
chr4 (27-129)||(39086575-39086677)
chr4 (13-130)||(293155-293272)
chr4 (30-131)||(9023242-9023343)
chr4 (27-130)||(169012-169116)
chr4 (27-131)||(39744028-39744132)
chr4 (30-129)||(169394-169493)
chr4 (39-130)||(35393741-35393830)
chr4 (27-130)||(48405961-48406063)
chr4 (68-130)||(24775776-24775838)
chr4 (47-131)||(16555513-16555598)
chr4 (29-133)||(23432472-23432577)
chr4 (1-131)||(47219131-47219257)
chr4 (27-131)||(292780-292884)
chr4 (67-131)||(11241653-11241716)
chr4 (27-133)||(23539837-23539941)
chr4 (27-130)||(26207698-26207801)
chr4 (39-106)||(39415247-39415314)
chr4 (39-129)||(11241389-11241478)
chr4 (27-129)||(23540204-23540306)
chr4 (20-130)||(45828993-45829103)
chr4 (39-128)||(8488447-8488534)
chr4 (27-128)||(43292038-43292139)
chr4 (27-130)||(26207360-26207462)
chr4 (34-129)||(43292316-43292411)
chr4 (34-124)||(49178644-49178735)
chr4 (39-130)||(54508814-54508904)
chr4 (39-129)||(3930179-3930268)
chr4 (75-128)||(8181992-8182046)
chr4 (28-128)||(22681576-22681681)
chr4 (39-132)||(22681845-22681936)
chr4 (14-128)||(23433425-23433538)
chr4 (30-102)||(11530154-11530225)
chr4 (27-115)||(48406337-48406425)
chr4 (68-131)||(5205986-5206049)
chr4 (39-129)||(27304718-27304806)
chr4 (67-129)||(5206222-5206283)
chr4 (76-130)||(25225399-25225453)
chr4 (27-101)||(44468875-44468949)
chr4 (27-130)||(8488187-8488287)
chr4 (88-129)||(49178533-49178574)
chr4 (75-130)||(8182172-8182228)
chr4 (77-124)||(16555695-16555743)
chr4 (27-111)||(25162265-25162349)
chr4 (78-129)||(7603422-7603472)
chr4 (75-124)||(27304893-27304943)
chr4 (40-124)||(5206100-5206185)
chr4 (18-126)||(8181873-8181981)
chr4 (28-116)||(54509070-54509155)
chr4 (24-64)||(24775585-24775625)
[»] chr6 (40 HSPs)
chr6 (1-135)||(33829562-33829696)
chr6 (9-129)||(33828990-33829110)
chr6 (27-132)||(3403940-3404046)
chr6 (24-130)||(21031978-21032084)
chr6 (27-129)||(18242107-18242210)
chr6 (27-129)||(10087810-10087912)
chr6 (27-131)||(30388315-30388418)
chr6 (27-129)||(33974251-33974353)
chr6 (39-130)||(18241853-18241944)
chr6 (39-129)||(11656746-11656836)
chr6 (68-129)||(3403717-3403778)
chr6 (39-131)||(10039674-10039764)
chr6 (27-130)||(7654500-7654603)
chr6 (39-136)||(21032243-21032341)
chr6 (24-139)||(31598221-31598336)
chr6 (27-126)||(32733948-32734047)
chr6 (39-129)||(30388062-30388150)
chr6 (38-131)||(13579615-13579706)
chr6 (29-122)||(21032107-21032203)
chr6 (65-129)||(22684348-22684411)
chr6 (65-129)||(22754657-22754720)
chr6 (67-139)||(31598720-31598791)
chr6 (75-126)||(3825530-3825580)
chr6 (39-130)||(23250591-23250680)
chr6 (27-130)||(29074324-29074426)
chr6 (27-130)||(29079088-29079190)
chr6 (27-130)||(29106897-29106999)
chr6 (34-128)||(22755048-22755142)
chr6 (33-102)||(2762510-2762579)
chr6 (27-131)||(23250843-23250947)
chr6 (75-130)||(33655115-33655169)
chr6 (75-124)||(2762611-2762661)
chr6 (75-124)||(10039843-10039893)
chr6 (39-129)||(33971994-33972082)
chr6 (73-130)||(2354808-2354865)
chr6 (79-124)||(12714436-12714481)
chr6 (76-124)||(33972190-33972239)
chr6 (77-124)||(3403867-3403915)
chr6 (40-124)||(11656608-11656695)
chr6 (77-124)||(30388242-30388290)
[»] chr2 (73 HSPs)
chr2 (1-134)||(2639408-2639541)
chr2 (1-129)||(26842164-26842292)
chr2 (9-131)||(26841585-26841707)
chr2 (12-130)||(2638819-2638937)
chr2 (1-126)||(7591204-7591328)
chr2 (9-128)||(18296077-18296196)
chr2 (27-132)||(30190920-30191026)
chr2 (29-130)||(24832330-24832432)
chr2 (38-139)||(20347427-20347528)
chr2 (27-130)||(6171408-6171511)
chr2 (33-130)||(11883622-11883719)
chr2 (13-129)||(7591788-7591904)
chr2 (39-135)||(32673107-32673202)
chr2 (27-126)||(40469680-40469780)
chr2 (39-129)||(11883890-11883980)
chr2 (27-126)||(8851151-8851250)
chr2 (27-132)||(7664245-7664350)
chr2 (67-130)||(18296685-18296748)
chr2 (27-126)||(26692772-26692871)
chr2 (51-130)||(37720203-37720282)
chr2 (27-129)||(7664625-7664727)
chr2 (51-129)||(16910827-16910905)
chr2 (39-129)||(30191189-30191279)
chr2 (1-66)||(18296648-18296713)
chr2 (12-132)||(5379896-5380016)
chr2 (27-127)||(6325299-6325399)
chr2 (34-130)||(8851541-8851637)
chr2 (65-129)||(17850978-17851042)
chr2 (27-131)||(41790864-41790968)
chr2 (12-131)||(5378659-5378778)
chr2 (14-129)||(38490780-38490894)
chr2 (39-133)||(20347159-20347252)
chr2 (39-129)||(40469427-40469517)
chr2 (33-127)||(15321394-15321486)
chr2 (39-126)||(15920781-15920867)
chr2 (24-127)||(18055050-18055150)
chr2 (27-129)||(26737732-26737835)
chr2 (13-122)||(6324924-6325033)
chr2 (27-128)||(16911221-16911321)
chr2 (39-130)||(6495687-6495776)
chr2 (39-130)||(26737481-26737569)
chr2 (27-126)||(5793450-5793549)
chr2 (27-130)||(17851354-17851457)
chr2 (27-126)||(26692399-26692498)
chr2 (33-126)||(43495441-43495535)
chr2 (38-129)||(43495569-43495658)
chr2 (39-129)||(6171156-6171245)
chr2 (39-129)||(32672842-32672932)
chr2 (27-131)||(7979565-7979667)
chr2 (51-128)||(18750102-18750178)
chr2 (27-126)||(19141801-19141898)
chr2 (68-126)||(18055309-18055367)
chr2 (65-127)||(19141446-19141507)
chr2 (77-131)||(29230280-29230334)
chr2 (65-130)||(7979993-7980057)
chr2 (42-126)||(15321515-15321600)
chr2 (38-126)||(17345736-17345822)
chr2 (13-66)||(31641545-31641598)
chr2 (39-131)||(17345999-17346090)
chr2 (40-126)||(18055169-18055257)
chr2 (77-129)||(40221313-40221364)
chr2 (34-124)||(40221446-40221538)
chr2 (77-124)||(40469607-40469655)
chr2 (82-130)||(43495308-43495356)
chr2 (40-133)||(40221545-40221631)
chr2 (27-126)||(41790494-41790592)
chr2 (76-124)||(26737657-26737706)
chr2 (77-126)||(29343584-29343633)
chr2 (76-124)||(32673020-32673069)
chr2 (76-128)||(6495468-6495519)
chr2 (77-124)||(11883751-11883799)
chr2 (92-132)||(29230562-29230602)
chr2 (92-132)||(29343861-29343901)
[»] chr7 (71 HSPs)
chr7 (1-129)||(44599489-44599617)
chr7 (1-131)||(13863311-13863441)
chr7 (9-130)||(44600069-44600190)
chr7 (1-130)||(13863884-13864011)
chr7 (1-131)||(8643693-8643822)
chr7 (13-140)||(46816249-46816376)
chr7 (29-131)||(9412278-9412381)
chr7 (27-135)||(3687608-3687716)
chr7 (27-131)||(10533032-10533136)
chr7 (27-135)||(37889211-37889319)
chr7 (27-130)||(17156966-17157069)
chr7 (27-129)||(37888833-37888935)
chr7 (29-130)||(37972350-37972451)
chr7 (27-130)||(20419276-20419379)
chr7 (27-130)||(22740155-22740258)
chr7 (27-131)||(20418886-20418990)
chr7 (27-130)||(3205045-3205148)
chr7 (27-129)||(9035244-9035347)
chr7 (39-130)||(9412022-9412113)
chr7 (27-126)||(18863970-18864069)
chr7 (27-131)||(9034865-9034970)
chr7 (30-130)||(13744188-13744287)
chr7 (27-131)||(18864354-18864457)
chr7 (27-131)||(37971958-37972062)
chr7 (27-130)||(29292921-29293024)
chr7 (27-129)||(13741557-13741659)
chr7 (47-135)||(15567246-15567331)
chr7 (27-129)||(36527750-36527852)
chr7 (39-131)||(23686683-23686773)
chr7 (27-129)||(3204669-3204769)
chr7 (68-131)||(13772639-13772702)
chr7 (47-129)||(13772872-13772955)
chr7 (63-130)||(16198965-16199032)
chr7 (27-129)||(29293298-29293400)
chr7 (27-132)||(42418980-42419085)
chr7 (39-129)||(3687353-3687445)
chr7 (34-126)||(22740550-22740641)
chr7 (65-129)||(48359320-48359383)
chr7 (38-128)||(5735253-5735344)
chr7 (39-126)||(27096306-27096392)
chr7 (39-126)||(27181911-27181997)
chr7 (27-130)||(38826865-38826968)
chr7 (24-129)||(23686421-23686525)
chr7 (33-126)||(27096168-27096262)
chr7 (33-126)||(27182041-27182135)
chr7 (24-126)||(38191265-38191367)
chr7 (28-130)||(42418590-42418692)
chr7 (68-133)||(33628653-33628718)
chr7 (39-131)||(6908211-6908302)
chr7 (39-102)||(15567019-15567079)
chr7 (39-127)||(29291808-29291896)
chr7 (27-131)||(48359610-48359713)
chr7 (67-129)||(35079960-35080021)
chr7 (66-129)||(5349724-5349784)
chr7 (75-128)||(8953889-8953941)
chr7 (68-128)||(18925315-18925373)
chr7 (33-129)||(29292001-29292095)
chr7 (73-130)||(30857902-30857959)
chr7 (65-126)||(36527387-36527447)
chr7 (77-129)||(18925062-18925114)
chr7 (24-129)||(27096047-27096149)
chr7 (24-129)||(27182154-27182256)
chr7 (75-125)||(18925229-18925280)
chr7 (39-95)||(5349497-5349550)
chr7 (76-126)||(6908485-6908534)
chr7 (89-130)||(34235737-34235778)
chr7 (77-125)||(38191387-38191435)
chr7 (75-128)||(39983700-39983753)
chr7 (47-127)||(33628397-33628475)
chr7 (75-127)||(34235978-34236030)
chr7 (67-111)||(35080215-35080259)
[»] chr8 (69 HSPs)
chr8 (1-131)||(13026633-13026763)
chr8 (1-129)||(39723974-39724102)
chr8 (9-130)||(9823295-9823416)
chr8 (9-126)||(13027215-13027332)
chr8 (1-129)||(22851390-22851518)
chr8 (1-133)||(13937316-13937447)
chr8 (17-130)||(13936722-13936833)
chr8 (1-106)||(39723425-39723530)
chr8 (1-129)||(3307338-3307466)
chr8 (1-129)||(9822748-9822876)
chr8 (27-129)||(41662354-41662457)
chr8 (1-130)||(6092776-6092902)
chr8 (29-127)||(765736-765835)
chr8 (29-130)||(12281123-12281225)
chr8 (27-129)||(15156136-15156239)
chr8 (27-129)||(43245871-43245974)
chr8 (13-131)||(15042143-15042261)
chr8 (39-131)||(15155881-15155973)
chr8 (27-131)||(37396706-37396810)
chr8 (38-129)||(37752084-37752176)
chr8 (27-145)||(16928926-16929043)
chr8 (28-130)||(41662520-41662622)
chr8 (39-130)||(43246139-43246231)
chr8 (27-130)||(17431286-17431389)
chr8 (39-129)||(12281390-12281480)
chr8 (39-129)||(16929207-16929296)
chr8 (27-129)||(24473343-24473445)
chr8 (39-129)||(37752381-37752470)
chr8 (27-131)||(6199048-6199152)
chr8 (27-135)||(24473720-24473828)
chr8 (27-131)||(34498507-34498611)
chr8 (64-127)||(25438794-25438857)
chr8 (27-129)||(37397097-37397199)
chr8 (25-129)||(3463894-3463999)
chr8 (30-127)||(15442765-15442862)
chr8 (27-131)||(6198656-6198760)
chr8 (39-130)||(18020053-18020141)
chr8 (27-130)||(20861590-20861693)
chr8 (39-129)||(34313765-34313852)
chr8 (47-126)||(34498125-34498204)
chr8 (39-130)||(41662106-41662197)
chr8 (67-129)||(23123338-23123400)
chr8 (27-106)||(74936-75015)
chr8 (27-89)||(37752154-37752217)
chr8 (51-129)||(9623502-9623580)
chr8 (65-131)||(15444637-15444703)
chr8 (39-127)||(74688-74773)
chr8 (39-132)||(33747981-33748073)
chr8 (39-126)||(9465838-9465923)
chr8 (72-131)||(2856524-2856583)
chr8 (29-124)||(18019915-18020013)
chr8 (51-126)||(25439102-25439176)
chr8 (75-125)||(43162539-43162588)
chr8 (1-66)||(22851912-22851976)
chr8 (75-127)||(23123517-23123567)
chr8 (39-129)||(43162234-43162325)
chr8 (79-122)||(7127660-7127702)
chr8 (40-130)||(9465606-9465693)
chr8 (47-130)||(11007800-11007883)
chr8 (77-128)||(22851958-22852009)
chr8 (27-126)||(33727057-33727156)
chr8 (39-137)||(3463634-3463729)
chr8 (27-129)||(16169174-16169275)
chr8 (77-131)||(22786838-22786892)
chr8 (39-95)||(765999-766053)
chr8 (39-124)||(7127789-7127877)
chr8 (76-124)||(15156062-15156111)
chr8 (89-137)||(767720-767767)
chr8 (77-124)||(37752242-37752290)
[»] chr5 (61 HSPs)
chr5 (1-135)||(18817537-18817671)
chr5 (1-130)||(11350807-11350935)
chr5 (1-131)||(18816950-18817080)
chr5 (27-129)||(18433015-18433118)
chr5 (1-131)||(11351355-11351483)
chr5 (27-131)||(25115755-25115860)
chr5 (27-131)||(25174847-25174952)
chr5 (27-130)||(26020449-26020553)
chr5 (27-131)||(12498565-12498669)
chr5 (39-131)||(22428932-22429021)
chr5 (27-131)||(12498880-12498984)
chr5 (39-131)||(25175115-25175207)
chr5 (27-131)||(26571116-26571220)
chr5 (39-130)||(18433281-18433371)
chr5 (27-130)||(19514915-19515018)
chr5 (27-128)||(22729392-22729492)
chr5 (27-126)||(34576870-34576968)
chr5 (27-126)||(21207229-21207328)
chr5 (27-129)||(3888239-3888341)
chr5 (39-129)||(34577129-34577217)
chr5 (27-131)||(26570727-26570831)
chr5 (27-131)||(43464144-43464247)
chr5 (27-126)||(3888614-3888713)
chr5 (27-129)||(19514525-19514628)
chr5 (39-131)||(25116023-25116117)
chr5 (50-131)||(5187805-5187886)
chr5 (34-126)||(2817152-2817244)
chr5 (67-131)||(22429188-22429251)
chr5 (51-135)||(37610196-37610279)
chr5 (51-135)||(37780314-37780397)
chr5 (38-131)||(16466708-16466798)
chr5 (65-132)||(31569904-31569970)
chr5 (27-130)||(34147462-34147565)
chr5 (27-130)||(42919304-42919406)
chr5 (27-126)||(43463759-43463857)
chr5 (39-129)||(9665792-9665879)
chr5 (27-101)||(11316926-11317000)
chr5 (77-123)||(16726084-16726130)
chr5 (65-142)||(10098931-10099007)
chr5 (67-126)||(9665560-9665617)
chr5 (75-131)||(33324838-33324894)
chr5 (27-130)||(34147140-34147241)
chr5 (27-130)||(25940520-25940623)
chr5 (75-130)||(41383167-41383221)
chr5 (27-129)||(22729008-22729108)
chr5 (38-129)||(23011079-23011170)
chr5 (51-129)||(37780718-37780796)
chr5 (51-134)||(10098514-10098597)
chr5 (31-126)||(11316717-11316812)
chr5 (83-129)||(12441320-12441364)
chr5 (33-128)||(25940972-25941067)
chr5 (28-131)||(41072167-41072269)
chr5 (76-131)||(41382891-41382945)
chr5 (46-126)||(9869563-9869639)
chr5 (29-126)||(9869688-9869790)
chr5 (76-124)||(25115885-25115934)
chr5 (76-124)||(25174977-25175026)
chr5 (78-126)||(34576991-34577040)
chr5 (51-127)||(2817551-2817626)
chr5 (77-124)||(18433143-18433191)
chr5 (79-126)||(23011261-23011309)
[»] scaffold0328 (2 HSPs)
scaffold0328 (1-129)||(6721-6849)
scaffold0328 (1-129)||(6152-6279)
[»] chr1 (80 HSPs)
chr1 (9-135)||(49284403-49284529)
chr1 (9-129)||(6002237-6002357)
chr1 (1-108)||(49284981-49285088)
chr1 (27-130)||(47955305-47955409)
chr1 (1-127)||(6002819-6002946)
chr1 (27-141)||(28633708-28633822)
chr1 (21-139)||(31847885-31848003)
chr1 (27-130)||(39691952-39692055)
chr1 (27-129)||(9347126-9347228)
chr1 (27-129)||(48105068-48105170)
chr1 (27-126)||(22149653-22149750)
chr1 (27-131)||(32162995-32163099)
chr1 (67-130)||(8108985-8109048)
chr1 (27-129)||(27172116-27172217)
chr1 (27-129)||(50615573-50615674)
chr1 (27-129)||(50623401-50623502)
chr1 (27-127)||(17518555-17518653)
chr1 (27-135)||(9347503-9347610)
chr1 (27-131)||(26815071-26815175)
chr1 (27-131)||(44911023-44911127)
chr1 (39-131)||(47955572-47955664)
chr1 (27-127)||(50526424-50526524)
chr1 (27-130)||(20480167-20480269)
chr1 (27-138)||(28634109-28634220)
chr1 (27-129)||(41082909-41083011)
chr1 (27-126)||(46823846-46823945)
chr1 (27-126)||(48104681-48104780)
chr1 (27-126)||(50430033-50430132)
chr1 (27-129)||(13918446-13918548)
chr1 (27-129)||(26814694-26814796)
chr1 (67-129)||(48190771-48190833)
chr1 (27-132)||(999477-999581)
chr1 (68-132)||(48191348-48191412)
chr1 (39-133)||(31848158-31848250)
chr1 (27-126)||(42611188-42611287)
chr1 (45-130)||(13589628-13589713)
chr1 (21-131)||(19008696-19008806)
chr1 (34-126)||(1176839-1176932)
chr1 (39-132)||(8108718-8108810)
chr1 (39-136)||(22149396-22149490)
chr1 (51-135)||(6703870-6703954)
chr1 (39-131)||(17518301-17518392)
chr1 (30-130)||(46824233-46824333)
chr1 (27-129)||(20371304-20371406)
chr1 (27-130)||(27172494-27172596)
chr1 (27-129)||(21687025-21687127)
chr1 (27-129)||(49317752-49317853)
chr1 (27-129)||(49318118-49318219)
chr1 (65-130)||(4692423-4692488)
chr1 (27-131)||(6703458-6703562)
chr1 (65-129)||(20480602-20480665)
chr1 (1-57)||(48191311-48191366)
chr1 (65-128)||(13918857-13918920)
chr1 (47-102)||(24671283-24671338)
chr1 (75-134)||(41083211-41083269)
chr1 (9-66)||(48190805-48190862)
chr1 (51-126)||(999115-999189)
chr1 (76-131)||(39690792-39690847)
chr1 (27-126)||(42611566-42611665)
chr1 (51-130)||(50429655-50429734)
chr1 (80-130)||(50615239-50615289)
chr1 (80-130)||(50623067-50623117)
chr1 (75-136)||(1177018-1177079)
chr1 (38-129)||(1176717-1176805)
chr1 (51-130)||(20371039-20371116)
chr1 (65-129)||(21687457-21687520)
chr1 (28-126)||(31848019-31848119)
chr1 (27-130)||(33085670-33085771)
chr1 (27-131)||(44911389-44911493)
chr1 (67-130)||(19007734-19007796)
chr1 (34-128)||(46056904-46056991)
chr1 (73-128)||(47498493-47498547)
chr1 (75-130)||(48313792-48313847)
chr1 (77-126)||(22149580-22149630)
chr1 (76-124)||(8108899-8108948)
chr1 (76-124)||(17518481-17518530)
chr1 (65-129)||(47498301-47498363)
chr1 (79-132)||(50949569-50949622)
chr1 (65-101)||(32162757-32162793)
chr1 (65-129)||(49318433-49318496)
[»] chr3 (69 HSPs)
chr3 (1-131)||(1928360-1928489)
chr3 (27-129)||(20968971-20969073)
chr3 (24-130)||(47871070-47871176)
chr3 (27-132)||(48159894-48159999)
chr3 (13-129)||(8314013-8314129)
chr3 (27-129)||(10293608-10293711)
chr3 (39-129)||(18875155-18875245)
chr3 (28-129)||(10348752-10348853)
chr3 (39-130)||(20968717-20968808)
chr3 (27-126)||(27238852-27238951)
chr3 (27-130)||(40848520-40848622)
chr3 (27-130)||(53687887-53687990)
chr3 (39-129)||(10293873-10293963)
chr3 (27-129)||(42673248-42673349)
chr3 (27-129)||(48160285-48160387)
chr3 (28-129)||(24485413-24485513)
chr3 (27-132)||(40848913-40849018)
chr3 (27-131)||(27238463-27238567)
chr3 (14-129)||(28702278-28702390)
chr3 (13-129)||(42672978-42673093)
chr3 (27-132)||(9026733-9026835)
chr3 (39-129)||(17372298-17372387)
chr3 (27-129)||(47666287-47666389)
chr3 (27-128)||(22429159-22429260)
chr3 (67-134)||(45060863-45060930)
chr3 (67-129)||(1927772-1927834)
chr3 (34-126)||(17372433-17372525)
chr3 (67-131)||(21895655-21895720)
chr3 (65-129)||(3353128-3353191)
chr3 (76-132)||(18874879-18874935)
chr3 (51-135)||(26007176-26007259)
chr3 (27-131)||(26007571-26007675)
chr3 (39-132)||(47870820-47870910)
chr3 (39-129)||(13657445-13657536)
chr3 (38-129)||(21896474-21896564)
chr3 (39-129)||(9026998-9027086)
chr3 (1-131)||(10771502-10771628)
chr3 (27-129)||(53688255-53688356)
chr3 (51-132)||(3353527-3353607)
chr3 (34-126)||(13657580-13657673)
chr3 (66-131)||(42455788-42455853)
chr3 (65-130)||(53766569-53766634)
chr3 (73-129)||(3644781-3644837)
chr3 (28-125)||(4947263-4947362)
chr3 (27-127)||(22429548-22429647)
chr3 (27-130)||(36180555-36180656)
chr3 (76-131)||(1101182-1101237)
chr3 (76-131)||(8315083-8315137)
chr3 (68-131)||(14015957-14016019)
chr3 (39-122)||(26540833-26540915)
chr3 (51-126)||(53766166-53766241)
chr3 (27-101)||(24485049-24485123)
chr3 (65-131)||(36180980-36181046)
chr3 (39-129)||(42627511-42627599)
chr3 (77-131)||(47665909-47665963)
chr3 (13-57)||(1927815-1927858)
chr3 (29-126)||(14015824-14015923)
chr3 (81-129)||(45060596-45060644)
chr3 (76-127)||(1100917-1100968)
chr3 (39-128)||(17372560-17372645)
chr3 (51-97)||(42456171-42456217)
chr3 (27-129)||(44008353-44008454)
chr3 (27-128)||(10348480-10348581)
chr3 (88-129)||(13657735-13657776)
chr3 (76-124)||(20968897-20968946)
chr3 (75-126)||(1101090-1101141)
chr3 (78-130)||(17441066-17441118)
chr3 (77-124)||(18875017-18875065)
chr3 (9-57)||(21895701-21895749)
[»] scaffold0110 (2 HSPs)
scaffold0110 (27-131)||(45758-45862)
scaffold0110 (39-130)||(45536-45626)
[»] scaffold0802 (3 HSPs)
scaffold0802 (27-129)||(1371-1474)
scaffold0802 (39-129)||(1118-1208)
scaffold0802 (76-124)||(1297-1346)
[»] scaffold0192 (2 HSPs)
scaffold0192 (33-130)||(25327-25424)
scaffold0192 (77-124)||(25247-25295)
[»] scaffold0319 (3 HSPs)
scaffold0319 (27-129)||(6648-6750)
scaffold0319 (39-130)||(6393-6485)
scaffold0319 (77-124)||(6575-6623)
[»] scaffold0001 (5 HSPs)
scaffold0001 (40-129)||(438930-439019)
scaffold0001 (39-131)||(439165-439255)
scaffold0001 (24-130)||(183611-183717)
scaffold0001 (39-126)||(183367-183453)
scaffold0001 (33-126)||(183497-183592)
[»] scaffold0535 (1 HSPs)
scaffold0535 (3-130)||(10011-10138)
[»] scaffold0017 (2 HSPs)
scaffold0017 (27-129)||(185226-185328)
scaffold0017 (27-128)||(184840-184941)
[»] scaffold0460 (2 HSPs)
scaffold0460 (27-130)||(329-432)
scaffold0460 (51-129)||(739-816)
[»] scaffold0176 (2 HSPs)
scaffold0176 (65-136)||(20033-20104)
scaffold0176 (51-140)||(19610-19698)
[»] scaffold0041 (2 HSPs)
scaffold0041 (27-130)||(38647-38750)
scaffold0041 (27-96)||(38284-38353)
[»] scaffold0002 (1 HSPs)
scaffold0002 (27-129)||(411923-412024)
[»] scaffold0029 (2 HSPs)
scaffold0029 (27-130)||(9904-10008)
scaffold0029 (67-131)||(10311-10373)
[»] scaffold0015 (2 HSPs)
scaffold0015 (39-134)||(17119-17214)
scaffold0015 (27-129)||(16853-16956)
[»] scaffold0069 (2 HSPs)
scaffold0069 (27-129)||(50458-50560)
scaffold0069 (51-130)||(50074-50151)
[»] scaffold0009 (1 HSPs)
scaffold0009 (39-135)||(205681-205774)
[»] scaffold0376 (2 HSPs)
scaffold0376 (73-130)||(7454-7510)
scaffold0376 (75-129)||(7600-7653)
[»] scaffold1221 (2 HSPs)
scaffold1221 (73-129)||(1511-1566)
scaffold1221 (39-126)||(1747-1834)
[»] scaffold0598 (2 HSPs)
scaffold0598 (76-128)||(6877-6927)
scaffold0598 (77-132)||(6604-6659)
[»] scaffold0035 (2 HSPs)
scaffold0035 (24-128)||(72967-73070)
scaffold0035 (39-126)||(73089-73177)


Alignment Details
Target: chr4 (Bit Score: 247; Significance: 1e-137; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 56505821 - 56505540
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56505821 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 56505722  T
Q  101 aagatatgggggaaaagtgcaattaagcctatattatatatgtatgatgctcaaccacaccaaccaaccactcttattgttcactgatttca------ct 194  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||    
T  56505721 aagataggggggaaaagtgcaattaagcctatattatatatgtatgatgctcaaccacaccaaccaaccactcttattgttcactgatttcactttcact 56505622  T
Q  195 ttttgaaggggattgcaactaaaatattaatattaaactgttaacatgtgtggaatgagatgatagaacacctcactgactg 276  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  56505621 ttttgaaggggattacaactaaaatattaatattaaactgttaacatgtgtggaatgagatgatagaacacctcactaactg 56505540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 9 - 133
Target Start/End: Complemental strand, 50678899 - 50678775
Alignment:
Q  9 catggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatg 108  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| |||||||||||||||||||||||||||||||||| |    
T  50678899 catggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagatagg 50678800  T
Q  109 ggggaaaagtgcaattaagcctata 133  Q
    || ||||||||||||||||||||||    
T  50678799 ggtgaaaagtgcaattaagcctata 50678775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 50679350 - 50679478
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| |||||||||||||||| |||||||||||    
T  50679350 ctaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgtacaattggcaa 50679449  T
Q  101 aagatatgggggaaaagtgcaattaagcc 129  Q
    |||||| ||| ||||||||||||||||||    
T  50679450 aagataggggtgaaaagtgcaattaagcc 50679478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 56506500 - 56506638
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    |||||||||| | |||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||| |||| || |||||| |||||||||||||    
T  56506500 ctaaaacacacgaggggccttcaaatcagaaagggggaaaatgatggggtgcaaaatcgctcaattaaaaacatggagtacaaaattgcacaattggcaa 56506599  T
Q  101 aagatatgggggaaaagtgcaattaagcctatattatat 139  Q
    |||||| ||| |||||||||||||||||||||| |||||    
T  56506600 aagataagggtgaaaagtgcaattaagcctataatatat 56506638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 36096401 - 36096526
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    |||||||||||||||||||| |||| |||||||||| |||||||||||||||||||| ||||  ||||||| ||||||||||||||||||||||||||||    
T  36096401 ctaaaacacatggggggcctccaaatcagaaaggggaaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaa 36096500  T
Q  101 aagatatgggggaaaagtgcaattaa 126  Q
    |||||| ||| |||||||||||||||    
T  36096501 aagataggggtgaaaagtgcaattaa 36096526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 43051178 - 43051307
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||| ||||  ||||||| ||||||||||||||| ||||||||||||    
T  43051178 ctaaaacacatggggggcctccaaatcagaaagagggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcacacaattggcaa 43051277  T
Q  101 aagatatgggggaaaagtgcaattaagcct 130  Q
    |||||| ||| ||||| |||||||||||||    
T  43051278 aagataggggtgaaaaatgcaattaagcct 43051307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 36095944 - 36095816
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    |||||| ||||||||||||| |||| |||||||||| |||||||| ||||||||||| ||||  ||||||| ||||||||||||||||||||||||||||    
T  36095944 ctaaaatacatggggggcctccaaatcagaaagggg-aaaaagatagggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaa 36095846  T
Q  101 aagatatgggggaaaagtgcaattaagcct 130  Q
    |||||| ||| ||||| |||||||||||||    
T  36095845 aagataggggtgaaaaatgcaattaagcct 36095816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 43050735 - 43050610
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    ||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||  |||  ||||||| ||||||||||||||||||||||||| ||    
T  43050735 ctaaaacacatggagggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcactcgtttaaaaacatggggtgcaaaatcgcacaattggtaa 43050636  T
Q  101 aagatatgggggaaaagtgcaattaa 126  Q
    |||||| ||  |||||||||||||||    
T  43050635 aagatagggatgaaaagtgcaattaa 43050610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 16555768 - 16555871
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  16555768 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagataagggggaaaagtgcaatta 16555867  T
Q  126 agcc 129  Q
    ||||    
T  16555868 agcc 16555871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 45830124 - 45830252
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    |||||||| ||||||||| | |||| |||||||||| |||||||||||||||||||| ||||  ||||||| |||||||| ||||||||||||||| |||    
T  45830124 ctaaaacatatggggggc-tccaaatcagaaagggg-aaaaagatggggtgcaaaatcgctcttttaaaaacatggggtgtaaaatcgcacaattgacaa 45830221  T
Q  101 aagatatgggggaaaagtgcaattaagccta 131  Q
    |||||| ||| ||||||||| ||||||||||    
T  45830222 aagataggggtgaaaagtgcgattaagccta 45830252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 11529296 - 11529169
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    |||||||| ||| |||| |||||||| | |||| ||||||| |||| |||||||||| || | |||||||| ||||||||||||||| ||||||||||||    
T  11529296 ctaaaacatatgaggggacttcaaactaaaaagagggaaaatgatgtggtgcaaaatcgcacgattaaaaacatggggtgcaaaatcacacaattggcaa 11529197  T
Q  101 aagatatgggggaaaagtgcaattaagc 128  Q
    ||| || || ||||||||||||||||||    
T  11529196 aagttagggaggaaaagtgcaattaagc 11529169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 3930431 - 3930535
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||||||||||||||||||| ||| ||  ||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  3930431 cagaaagggggcaaaaagatggggtgcaaaatcgctaaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagata-gggggaaaagtgcaatta 3930529  T
Q  126 agccta 131  Q
    ||||||    
T  3930530 agccta 3930535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 28196448 - 28196344
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  28196448 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaattataggggggaaaagtgcaattaa 28196349  T
Q  127 gccta 131  Q
    |||||    
T  28196348 gccta 28196344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 4239318 - 4239425
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||| || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||| ||||||||||||||    
T  4239318 cagaaagggggaaaaatatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaa 4239417  T
Q  127 gcctatat 134  Q
    ||| ||||    
T  4239418 gccaatat 4239425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 9023632 - 9023735
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||| |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  9023632 cagaaagggggaaaactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 9023731  T
Q  127 gcct 130  Q
    ||||    
T  9023732 gcct 9023735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 28196725 - 28196828
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  28196725 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 28196824  T
Q  127 gcct 130  Q
    ||||    
T  28196825 gcct 28196828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 9380693 - 9380798
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||| ||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  9380693 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggagtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 9380792  T
Q  127 gcctat 132  Q
    ||||||    
T  9380793 gcctat 9380798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 25161980 - 25161879
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  25161980 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 25161881  T
Q  127 gc 128  Q
    ||    
T  25161880 gc 25161879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 39744417 - 39744521
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  39744417 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 39744516  T
Q  127 gccta 131  Q
    |||||    
T  39744517 gccta 39744521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 9380409 - 9380307
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||| ||||||||||||||||||||||  ||| |||||||||||||||||||    
T  9380409 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 9380310  T
Q  127 gcc 129  Q
    |||    
T  9380309 gcc 9380307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 32703602 - 32703704
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||| ||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  32703602 cagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 32703701  T
Q  127 gcc 129  Q
    |||    
T  32703702 gcc 32703704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 13198707 - 13198606
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaat-atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatt 124  Q
    ||||||||||| |||||||||||||||||||| ||||||  |||||  | ||||||||||||||||||||||||||||||||  || |||||||||||||    
T  13198707 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataaaggagaaaagtgcaatt 13198608  T
Q  125 aa 126  Q
    ||    
T  13198607 aa 13198606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 39 - 130
Target Start/End: Original strand, 13198870 - 13198961
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||| ||||||||||| ||||||   |||| | |||||||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  13198870 aaaagatagggtgcaaaatcgctcaaaacaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 13198961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 32703327 - 32703224
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| || |||||||| ||||||||||||||||||  ||| |||||||||||||||||||    
T  32703327 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactacggggtgcataatcgcacaattggcaaattataggggggaaaagtgcaattaa 32703228  T
Q  127 gcct 130  Q
    ||||    
T  32703227 gcct 32703224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 39 - 125
Target Start/End: Original strand, 49178779 - 49178866
Alignment:
Q  39 aaaagatggggtgcaaaatagctc-aattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||||||||||| |||| ||  ||||| | |||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  49178779 aaaagatggggtgcaaaatcgctccaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggagaaaagtgcaatta 49178866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 18077167 - 18077257
Alignment:
Q  40 aaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||||| |||||||| ||||||  ||||| | ||||||||||||||||||||| |||||| ||| ||| |||||||||||||||||||    
T  18077167 aaagatgggatgcaaaatcgctcaacaaaaaagagggggtgcaaaatcgcacaattagcaaaaaataggggtgaaaagtgcaattaagcct 18077257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 39086575 - 39086677
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| |||  |||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  39086575 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactattaggtgcaaaatcgcacaattggcaaactatatgggagaaaagtgcaattaa 39086674  T
Q  127 gcc 129  Q
    |||    
T  39086675 gcc 39086677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 293155 - 293272
Alignment:
Q  13 gggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatggggg 112  Q
    ||||||| | ||| |||||||||||||||  ||  || ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| ||||     
T  293155 gggggccataaaatcagaaagggggaaaactatacggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggga 293254  T
Q  113 aaaagtgcaattaagcct 130  Q
    ||||||||||||||||||    
T  293255 aaaagtgcaattaagcct 293272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 9023343 - 9023242
Alignment:
Q  30 aaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||||||||  || ||| |||||||  |||  |||||| ||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||    
T  9023343 aaagggggaaaactatagggggcaaaatcactcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggagaaaagtgcaattaagcc 9023244  T
Q  130 ta 131  Q
    ||    
T  9023243 ta 9023242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 169116 - 169012
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggg-gaaaagtgcaatta 125  Q
    |||||||||| ||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||| ||||||||||||||    
T  169116 cagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaattatggggtgcaaaatcgcacaattggcaaactatagggggagaaaagtgcaatta 169017  T
Q  126 agcct 130  Q
    |||||    
T  169016 agcct 169012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 39744132 - 39744028
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||| |||||||||||||||| |||  ||| |||| ||||||||||||||    
T  39744132 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaattatggggtggaaaatcgcacaattggtaaactatagggggaaaaagtgcaattaa 39744033  T
Q  127 gccta 131  Q
    |||||    
T  39744032 gccta 39744028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 129
Target Start/End: Original strand, 169394 - 169493
Alignment:
Q  30 aaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| ||||||||| ||||||||||||    
T  169394 aaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaagcc 169493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 130
Target Start/End: Original strand, 35393741 - 35393830
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||||||||||||||| |||| || ||||| | |||||||||| |||||||||| |||||||||| ||| |||||||||||||||||||    
T  35393741 aaaagatggggtgcaaaatcgctc-ataaaaaagagggggtgcaaattcgcacaattagcaaaagata-gggtgaaaagtgcaattaagcct 35393830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 48406063 - 48405961
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||| ||| ||||||||||  ||| |||||||||||||||||||    
T  48406063 cagaaagggggaaaattatagggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcataattggcaaactata-gggggaaaagtgcaattaa 48405965  T
Q  127 gcct 130  Q
    ||||    
T  48405964 gcct 48405961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 24775776 - 24775838
Alignment:
Q  68 aaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    |||| |||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||    
T  24775776 aaaagatggggtgcaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaagcct 24775838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 16555598 - 16555513
Alignment:
Q  47 gggtgcaaaatagctcaattaaaaat-atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    ||||||||||| ||||||  |||||  | |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  16555598 gggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagccta 16555513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 23432577 - 23432472
Alignment:
Q  29 gaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaattaag 127  Q
    ||||||||| ||||||  ||||||||||| | ||| ||||||| |||||||||| ||| ||||||||| | |||| ||| |||| |||||||||||||||    
T  23432577 gaaagggggcaaaagagagggtgcaaaattgttcatttaaaaagatggggtgcagaattgcacaattgacaaaaaaatagggggcaaaagtgcaattaag 23432478  T
Q  128 cctata 133  Q
    ||||||    
T  23432477 cctata 23432472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 47219131 - 47219257
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    ||||||||||||| |||||| |||| ||||    ||||||||||||||||| ||||| |||   ||||||| ||  ||||||||||||||||||| ||||    
T  47219131 ctaaaacacatggagggcctccaaatcaga----gggaaaaagatggggtgtaaaatcgctggtttaaaaacataaggtgcaaaatcgcacaattagcaa 47219226  T
Q  101 aagatatgggggaaaagtgcaattaagccta 131  Q
    ||||||  || ||||| ||||||||| ||||    
T  47219227 aagatagaggtgaaaaatgcaattaaaccta 47219257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 292884 - 292780
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||   | ||| ||||||| ||||  |||||| |||| | |||||||| ||||||||||||||  ||| |||||||||||||||||||    
T  292884 cagaaagggggaaaactgtagggggcaaaatcgctcgtttaaaactatgagatgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaa 292785  T
Q  127 gccta 131  Q
    |||||    
T  292784 gccta 292780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 11241653 - 11241716
Alignment:
Q  67 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||    
T  11241653 aaaaagatggggtgcaaaatcccacaattggcaaaagata-gggggaaaagtacaattaagccta 11241716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 23539941 - 23539837
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||| ||||||| || ||| ||||||| | ||  || ||| ||||||||||||||||||||||||||||||   ||| |||| |||||||||||||    
T  23539941 cagaaaggaggaaaaatatagggggcaaaatcgttcgttttaaactatggggtgcaaaatcgcacaattggcaaa--ctatagggggaaagtgcaattaa 23539844  T
Q  127 gcctata 133  Q
    |||||||    
T  23539843 gcctata 23539837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 26207698 - 26207801
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||| ||||||  || ||| ||||||| ||||  || |||  |||||||||||||||||||||||||||||  ||| ||||||||| |||||||||    
T  26207698 cagaaaggaggaaaactatagggggcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaa 26207797  T
Q  127 gcct 130  Q
    ||||    
T  26207798 gcct 26207801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 39415314 - 39415247
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagata 106  Q
    ||||||||||||||||||| |||||| |||||| |  |||||||||||||||||||| ||||||||||    
T  39415314 aaaagatggggtgcaaaatcgctcaaataaaaagagagggtgcaaaatcgcacaattagcaaaagata 39415247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 11241478 - 11241389
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||| ||||||||||| ||||||  ||||| | ||| |||||||||||||||||  ||||||||| || |||||||||||||||||||    
T  11241478 aaaagatagggtgcaaaatcgctcaaa-aaaaagaggggatgcaaaatcgcacaattaacaaaagataaggaggaaaagtgcaattaagcc 11241389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 23540204 - 23540306
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| | ||||| ||||  |||||| ||| ||||||||||||||||||||| ||||  ||| ||| |||||||||||||||    
T  23540204 cagaaagggggaaaactatagggggtaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattgacaaactataggggtgaaaagtgcaattaa 23540303  T
Q  127 gcc 129  Q
    |||    
T  23540304 gcc 23540306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 130
Target Start/End: Complemental strand, 45829103 - 45828993
Alignment:
Q  20 ttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtg 119  Q
    |||||| ||||| | |||||||||||||| |||||||| |||   |||| || || |||| ||||||||||||||||| |||||||| | | |||||||     
T  45829103 ttcaaatcagaacgagggaaaaagatgggatgcaaaatcgcttgtttaataacattgggtacaaaatcgcacaattggtaaaagataggagtgaaaagta 45829004  T
Q  120 caattaagcct 130  Q
    |||||||||||    
T  45829003 caattaagcct 45828993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 128
Target Start/End: Original strand, 8488447 - 8488534
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 128  Q
    ||||||||||||||||||| ||||||  ||||| | ||||||||||||||||||||| | ||||||||  || |||||||||||||||||    
T  8488447 aaaagatggggtgcaaaatcgctcaaa-aaaaagagggggtgcaaaatcgcacaattagaaaaagata-aggcgaaaagtgcaattaagc 8488534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 43292139 - 43292038
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||| ||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||  ||||||||||||||    
T  43292139 cagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggaaaaaagtgcaattaa 43292040  T
Q  127 gc 128  Q
    ||    
T  43292039 gc 43292038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 26207462 - 26207360
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||| ||||||  || ||| ||||||| ||||  || |||  |||||||||||||||||||||||||||||  ||| ||||| |||||||||||||    
T  26207462 cagaaaggaggaaaactatagggggcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaactata-ggggggaaagtgcaattaa 26207364  T
Q  127 gcct 130  Q
    ||||    
T  26207363 gcct 26207360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 43292316 - 43292411
Alignment:
Q  34 ggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||||  || ||| ||||||| ||||  |||||| |||||| |||||||||||||||||||||||  | | ||||||||| ||||||||||||    
T  43292316 ggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactaaaggggggaaaaatgcaattaagcc 43292411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 124
Target Start/End: Complemental strand, 49178735 - 49178644
Alignment:
Q  34 ggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 124  Q
    |||| ||||||| ||||||||||| ||||||  ||| |   |||||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  49178735 ggggcaaaagattgggtgcaaaattgctcaaaaaaagaagaggggtgcaaaatcgcacaattggcaaaaagatagggggcaaaagtgcaatt 49178644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 54508904 - 54508814
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||| ||||||||||| ||||||  ||||| |  |||||||||||| |||||||||||||||||  | || ||||||||||||||||||    
T  54508904 aaaagatagggtgcaaaatcgctcaaa-aaaaagagagggtgcaaaatcacacaattggcaaaagattggaggaaaaagtgcaattaagcct 54508814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 3930268 - 3930179
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||| ||||||||||| ||||||  ||||| | |||||||||||||||| ||||   |||||||| |||| |||||||||||||||||    
T  3930268 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcataattaataaaagata-ggggaaaaagtgcaattaagcc 3930179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 8182046 - 8181992
Alignment:
Q  75 ggggtgcaaaatcgcacaattggcaaaa-gatatgggggaaaagtgcaattaagc 128  Q
    |||||||||||||||||||||||||||| |||| |||| ||||||||||||||||    
T  8182046 ggggtgcaaaatcgcacaattggcaaaacgatagggggcaaaagtgcaattaagc 8181992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 128
Target Start/End: Complemental strand, 22681681 - 22681576
Alignment:
Q  28 agaaagggggaaaaagatggggtgcaaaatagctcaa---ttaaaaat---atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgca 121  Q
    ||||||||| ||||||||||||||||||||  || ||   |||||||    | |||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  22681681 agaaaggggcaaaaagatggggtgcaaaatcactaaaaaattaaaaaacagagggggtgcaaaatcgcacaattgacaaaagata-ggggggaaagtgca 22681583  T
Q  122 attaagc 128  Q
    |||||||    
T  22681582 attaagc 22681576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 132
Target Start/End: Original strand, 22681845 - 22681936
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctat 132  Q
    |||||||  |||||||||| ||||||  |||||||   |||||||||| ||||||||  ||||||||| | |||||||||||||||||||||||    
T  22681845 aaaagatatggtgcaaaattgctcaa--aaaaataaatggtgcaaaattgcacaattaacaaaagataggagggaaaagtgcaattaagcctat 22681936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 23433425 - 23433538
Alignment:
Q  14 ggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatggggga 113  Q
    |||||| ||||| |||||||||| ||||| |  ||||||||||| ||||| ||||||| |  || |||| ||||||||||||| ||||||||| | || |    
T  23433425 ggggccatcaaatcagaaaggggcaaaaa-agagggtgcaaaatcgctcacttaaaaagaaaggatgcacaatcgcacaattgacaaaagataagaggca 23433523  T
Q  114 aaagtgcaattaagc 128  Q
     ||||||||||||||    
T  23433524 gaagtgcaattaagc 23433538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 11530154 - 11530225
Alignment:
Q  30 aaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaa 102  Q
    |||||||||||| ||| ||||||||||| || | ||||||||||| |||| ||||||||||||||||| ||||    
T  11530154 aaagggggaaaaggattgggtgcaaaatcgcacgattaaaaatat-gggttcaaaatcgcacaattggtaaaa 11530225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 48406337 - 48406425
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaa 115  Q
    |||||||||| ||||  || ||| ||||||| ||||  |||||| ||| ||||||||||||||||||||||||||  ||| ||||||||    
T  48406337 cagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaattataggggggaaa 48406425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 5206049 - 5205986
Alignment:
Q  68 aaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    |||| |||||||||||||||||  ||||  ||||||||| || |||||||||||||||||||||    
T  5206049 aaaagatggggtgcaaaatcgccaaattaacaaaagatagggaggaaaagtgcaattaagccta 5205986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 27304806 - 27304718
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||| ||||| |||||||| ||||||   |||| | ||||||||||||||||||||| ||| ||||||  ||||||||| |||||||||||    
T  27304806 aaaatatgggttgcaaaatcgctcaaaagaaaagagggggtgcaaaatcgcacaattagcagaagata--ggggaaaagggcaattaagcc 27304718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 5206222 - 5206283
Alignment:
Q  67 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||| || ||||||||||||||||||||   |||||||| ||||||||||||||||||||||    
T  5206222 aaaaagatagggtgcaaaatcgcacaattaa-aaaagataagggggaaaagtgcaattaagcc 5206283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 25225399 - 25225453
Alignment:
Q  76 gggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||||||||||||||||||||||||||| | |  | ||||||||||||||||    
T  25225399 gggtgcaaaatcgcacaattggcaaaagataggagacagaagtgcaattaagcct 25225453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 44468875 - 44468949
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaa 101  Q
    |||||||| ||||||  || ||| ||||||| ||||  |||||| |||| |||||||||||||||||||||||||    
T  44468875 cagaaaggaggaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaa 44468949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 8488287 - 8488187
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||| ||||| ||||| |||||||| | | ||  |||||   |||||||||||||||||||||  ||||||||||||   |||| |||||||||    
T  8488287 cagaaaggggaaaaaaaatgggctgcaaaatcgttaaaaaaaaaa---ggggtgcaaaatcgcacaattaacaaaagatatggaaaaaaaatgcaattaa 8488191  T
Q  127 gcct 130  Q
    ||||    
T  8488190 gcct 8488187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 129
Target Start/End: Complemental strand, 49178574 - 49178533
Alignment:
Q  88 gcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||||||| |||||||||||||| ||||||||||||||||||    
T  49178574 gcacaattagcaaaagatatgggagaaaagtgcaattaagcc 49178533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 8182172 - 8182228
Alignment:
Q  75 ggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||||||||||||||||| || |||| ||| ||| |||||||||||||||||||    
T  8182172 ggggtgcaaaatcgcacaattagcaaaaaaataggggtgaaaagtgcaattaagcct 8182228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 124
Target Start/End: Original strand, 16555695 - 16555743
Alignment:
Q  77 ggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 124  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||    
T  16555695 ggtgcaaaatcgcacaattagcaaaaagataagggggaaaagtgcaatt 16555743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 25162265 - 25162349
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggg 111  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||| |||||||||| |||||||| ||||| ||| ||||    
T  25162265 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggagtgcaaaatcacacaattgacaaaatataggggg 25162349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 129
Target Start/End: Original strand, 7603422 - 7603472
Alignment:
Q  78 gtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||||||||||||||||||  |||||||| |||| |||||||||||||||||    
T  7603422 gtgcaaaatcgcacaattgtaaaaagata-ggggaaaaagtgcaattaagcc 7603472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 27304893 - 27304943
Alignment:
Q  75 ggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 124  Q
    ||||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  27304893 ggggtgcaaaatcgcacaattagcaaaaagatagggggaaaaagtgcaatt 27304943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 5206100 - 5206185
Alignment:
Q  40 aaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 124  Q
    |||||| ||||||||||| |||||   ||||| | || |||||||||||||||||| || |||||||| |||| | ||||||||||    
T  5206100 aaagatagggtgcaaaatcgctcagaaaaaaagagggagtgcaaaatcgcacaattagcaaaaagatagggggaagaagtgcaatt 5206185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 8181981 - 8181873
Alignment:
Q  18 ccttcaaaccagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaa 116  Q
    ||||| ||||| |||||||| ||||| |||||||||||||| | ||||  ||||| | |||| ||||||| |||||||| ||||||  || || ||||||    
T  8181981 ccttctaaccaaaaagggggcaaaaaaatggggtgcaaaatcggtcaa-aaaaaagagggggagcaaaattgcacaattagcaaaatttagggaggaaaa 8181883  T
Q  117 gtgcaattaa 126  Q
    || |||||||    
T  8181882 gtacaattaa 8181873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 54509070 - 54509155
Alignment:
Q  28 agaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaa 116  Q
    |||||||||| ||||  ||| ||||||||| ||||||  ||||| |  |||||||||||||||||||| |||||| ||| |||||||||    
T  54509070 agaaagggggcaaaatttggagtgcaaaatcgctcaaaaaaaaaga--gggtgcaaaatcgcacaattagcaaaaaata-gggggaaaa 54509155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 24775625 - 24775585
Alignment:
Q  24 aaccagaaagggggaaaaagatggggtgcaaaatagctcaa 64  Q
    |||||||||||||  ||||||||||||||||||| ||||||    
T  24775625 aaccagaaaggggataaaagatggggtgcaaaattgctcaa 24775585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 3e-51; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 33829562 - 33829696
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||||||||||||    
T  33829562 ctaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaa 33829661  T
Q  101 aagatatgggggaaaagtgcaattaagcctatatt 135  Q
    |||||| ||| ||||||||||||||||||||||||    
T  33829662 aagataggggtgaaaagtgcaattaagcctatatt 33829696  T

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Target: chr6; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 9 - 129
Target Start/End: Complemental strand, 33829110 - 33828990
Alignment:
Q  9 catggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatg 108  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| |||||||||||||||||||||||||||||||||| |    
T  33829110 catggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagatagg 33829011  T
Q  109 ggggaaaagtgcaattaagcc 129  Q
    || ||||||||||||||||||    
T  33829010 ggtgaaaagtgcaattaagcc 33828990  T

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Target: chr6; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 3403940 - 3404046
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  3403940 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaatta 3404039  T
Q  126 agcctat 132  Q
    |||||||    
T  3404040 agcctat 3404046  T

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Target: chr6; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 21032084 - 21031978
Alignment:
Q  24 aaccagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaa 122  Q
    |||||||||||||| |||||||||||||||||||| ||||||  ||||| | ||||||||||||||||||||| ||||||| || |||||||||||||||    
T  21032084 aaccagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagtta-gggggaaaagtgcaa 21031986  T
Q  123 ttaagcct 130  Q
    ||||||||    
T  21031985 ttaagcct 21031978  T

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Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 18242107 - 18242210
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||||||||||||| ||   |||| ||||||||    
T  18242107 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagatagggaaaaaaaatgcaatta 18242206  T
Q  126 agcc 129  Q
    ||||    
T  18242207 agcc 18242210  T

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Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 10087810 - 10087912
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  | | |||||||||||||||||||    
T  10087810 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactaaaggggggaaaagtgcaattaa 10087909  T
Q  127 gcc 129  Q
    |||    
T  10087910 gcc 10087912  T

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Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 30388315 - 30388418
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | ||||||||||||||||||||| |||||||||| |||| |||||| ||||||    
T  30388315 cagaaagggggtaaaaagatggggtgcaaaatcgctcaa--aaaaaaagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtacaatta 30388412  T
Q  126 agccta 131  Q
    | ||||    
T  30388413 aaccta 30388418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 33974251 - 33974353
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| ||||||||| |||||||||    
T  33974251 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaa 33974350  T
Q  127 gcc 129  Q
    |||    
T  33974351 gcc 33974353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 18241944 - 18241853
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||| ||||||||||| ||||||   |||| | |||||||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  18241944 aaaagatagggtgcaaaatcgctcaaaacaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 18241853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 11656746 - 11656836
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||||||||||||||| ||||||  | ||| | ||||||||||||||||||||| |||||||||| | | ||||||||||||||||||    
T  11656746 aaaagatggggtgcaaaatcgctcaaaaataaagagggggtgcaaaatcgcacaattagcaaaagataggagagaaaagtgcaattaagcc 11656836  T

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Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 3403778 - 3403717
Alignment:
Q  68 aaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  3403778 aaaagatggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 3403717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 39 - 131
Target Start/End: Complemental strand, 10039764 - 10039674
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    ||||||||||||| ||||| |||||   ||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  10039764 aaaagatggggtgtaaaatcgctcataaaaaaaga-ggggtgcaaaatcgcacaattagcaaaagata-gggggaaaagtgcaattaagccta 10039674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 7654500 - 7654603
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||| |  |||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  7654500 cagaaagggggaaaactatagggggcaaagtcactcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 7654599  T
Q  127 gcct 130  Q
    ||||    
T  7654600 gcct 7654603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 21032243 - 21032341
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatgg-ggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatatta 136  Q
    ||||||||||||||||||| ||||||  |||||   || || ||||||||||||||||  ||||||||| |||||||||||||||||||||||| ||||    
T  21032243 aaaagatggggtgcaaaatcgctcaaagaaaaaagaggaggcgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcctagatta 21032341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 31598221 - 31598336
Alignment:
Q  24 aaccagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaa 122  Q
    ||||| |||||||| |||||||||||||||||||| ||||||  |||||    |||||||||||||||||||| |||||||||| | ||||||| | |||    
T  31598221 aaccaaaaagggggcaaaaagatggggtgcaaaattgctcaaaaaaaaaagaagggtgcaaaatcgcacaattagcaaaagata-gagggaaaaatacaa 31598319  T
Q  123 ttaagcctatattatat 139  Q
    ||||||||  |||||||    
T  31598320 ttaagccttaattatat 31598336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 32733948 - 32734047
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||||| |||||  || ||| ||||||| ||||  |||||| |||||| |||||||||||||||||||||||  ||| || ||||||||||||||||    
T  32733948 cagaaagggagaaaattatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaa 32734047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 30388150 - 30388062
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||||||||||||||| ||||||  ||||| |  || ||||||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  30388150 aaaagatggggtgcaaaatcgctcaaa-aaaaagagaggctgcaaaatcgcacaattagcaaaagata-ggggggaaagtgcaattaagcc 30388062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 131
Target Start/End: Original strand, 13579615 - 13579706
Alignment:
Q  38 aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    ||||| |||||||||||||| ||| ||  ||||  | ||||||||||||||||||||| ||||| |||| ||| ||||||||||||||||||||    
T  13579615 aaaaaaatggggtgcaaaatcgctaaaa-aaaacgagggggtgcaaaatcgcacaattagcaaacgata-gggagaaaagtgcaattaagccta 13579706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 21032203 - 21032107
Alignment:
Q  29 gaaagggggaaaaagatggggtgcaaaatagctcaattaaa--aatatggggtgcaaaatcgcacaattggcaa-aagatatgggggaaaagtgcaa 122  Q
    ||||||||| ||||||||||||| ||||| ||||||  |||  || | |||||||||||||||||||||| ||| |||||| |||| ||||||||||    
T  21032203 gaaagggggtaaaagatggggtgaaaaatcgctcaaaaaaaagaagagggggtgcaaaatcgcacaattgacaagaagatagggggcaaaagtgcaa 21032107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 22684348 - 22684411
Alignment:
Q  65 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||||| |||||||||||||||| |||||||||||||  |||  |||||||||||||||||||||    
T  22684348 ttaaaactatggggtgcaaaatcacacaattggcaaactata-aggggaaaagtgcaattaagcc 22684411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 22754720 - 22754657
Alignment:
Q  65 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||||| |||||||||||||||| |||||||||||||  |||  |||||||||||||||||||||    
T  22754720 ttaaaactatggggtgcaaaatcacacaattggcaaactata-aggggaaaagtgcaattaagcc 22754657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 31598720 - 31598791
Alignment:
Q  67 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatattatat 139  Q
    ||||| ||||| |||||||||||||||||  ||||||||| ||||||||||||||||||| |||  |||||||    
T  31598720 aaaaagatgggatgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaaaccttaattatat 31598791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 126
Target Start/End: Complemental strand, 3825580 - 3825530
Alignment:
Q  75 ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  3825580 ggggtgcaaaatcgcacaattagcaaaatata-gggggaaaagtgcaattaa 3825530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 23250680 - 23250591
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||| ||| ||||||| ||||||  ||||| | ||||||||| ||| |||||||| ||||||||| |||| ||||||||||||||||||    
T  23250680 aaaagatagggcgcaaaatcgctcaaa-aaaaagagggggtgcaagatctcacaattgacaaaagata-ggggaaaaagtgcaattaagcct 23250591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 29074324 - 29074426
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||||| |||||  || ||| | ||||| ||||  || ||| ||||||||||||||||||||||||||||||  ||| ||||| |||| ||||||||    
T  29074324 cagaaagggcgaaaactataggggggaaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactata-ggggggaaagagcaattaa 29074422  T
Q  127 gcct 130  Q
    ||||    
T  29074423 gcct 29074426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 29079088 - 29079190
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||||| |||||  || ||| | ||||| ||||  || ||| ||||||||||||||||||||||||||||||  ||| ||||| |||| ||||||||    
T  29079088 cagaaagggcgaaaactataggggggaaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactata-ggggggaaagagcaattaa 29079186  T
Q  127 gcct 130  Q
    ||||    
T  29079187 gcct 29079190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 29106897 - 29106999
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||||| |||||  || ||| | ||||| ||||  || ||| ||||||||||||||||||||||||||||||  ||| ||||| |||| ||||||||    
T  29106897 cagaaagggcgaaaactataggggggaaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactata-ggggggaaagagcaattaa 29106995  T
Q  127 gcct 130  Q
    ||||    
T  29106996 gcct 29106999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 128
Target Start/End: Original strand, 22755048 - 22755142
Alignment:
Q  34 ggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 128  Q
    ||||||||  || ||| ||||||| ||||  |||||| |||| |||||||||||||| ||||| ||||  |||  ||||||||||||||||||||    
T  22755048 ggggaaaactatagggggcaaaatcgctcgtttaaaactatgtggtgcaaaatcgcataattgacaaactataaaggggaaaagtgcaattaagc 22755142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 2762579 - 2762510
Alignment:
Q  33 gggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaa 102  Q
    |||| ||||||||| ||||||||||  |||||  ||||| | ||||||||||||||||||||| ||||||    
T  2762579 ggggcaaaaagatgaggtgcaaaatcactcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaa 2762510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 23250843 - 23250947
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagct-caattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||||||||||| |||||| |||  ||  ||||| | ||||| |||| |||||||||| |||||||||| |||  ||||||||||| |    
T  23250843 cagaaagggggcaaaagatggggtacaaaatcgctaaaaaaaaaaagagggggtacaaattcgcacaattagcaaaagata-gggcaaaaagtgcaatca 23250941  T
Q  126 agccta 131  Q
    ||||||    
T  23250942 agccta 23250947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 33655115 - 33655169
Alignment:
Q  75 ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    |||||||||||| |||||||| ||||||||||  ||||| ||||||||||||||||    
T  33655115 ggggtgcaaaattgcacaattagcaaaagata-aggggacaagtgcaattaagcct 33655169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 2762661 - 2762611
Alignment:
Q  75 ggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 124  Q
    ||||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  2762661 ggggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 2762611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 10039843 - 10039893
Alignment:
Q  75 ggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 124  Q
    ||||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  10039843 ggggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 10039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 33972082 - 33971994
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||| ||||||||||| ||||||  || || | |||||||||||||| ||||||  ||||||||| |||| |||| ||||||||||||    
T  33972082 aaaagatagggtgcaaaatcgctcaaa-aataagagggggtgcaaaatcgtacaattaacaaaagata-ggggaaaaactgcaattaagcc 33971994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 2354808 - 2354865
Alignment:
Q  73 atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    |||||||||||||||||||||||| ||||  |||   ||||||| |||||||||||||    
T  2354808 atggggtgcaaaatcgcacaattgacaaactatagacgggaaaaatgcaattaagcct 2354865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 12714481 - 12714436
Alignment:
Q  79 tgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatt 124  Q
    |||||||||||||||||  ||||||||| |||| ||||||||||||    
T  12714481 tgcaaaatcgcacaattaacaaaagatagggggcaaaagtgcaatt 12714436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 33972190 - 33972239
Alignment:
Q  76 gggtgcaaaatcgcacaattggcaaaa-gatatgggggaaaagtgcaatt 124  Q
    |||||||||||| ||||||| |||||| ||||||||| ||||||||||||    
T  33972190 gggtgcaaaatctcacaattagcaaaaagatatggggcaaaagtgcaatt 33972239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 124
Target Start/End: Original strand, 3403867 - 3403915
Alignment:
Q  77 ggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 124  Q
    ||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  3403867 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 3403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 11656695 - 11656608
Alignment:
Q  40 aaagatggggtgcaaaatagctcaattaaaa--atatggggtgcaaaatcgcacaattggcaaaa-gatatgggggaaaagtgcaatt 124  Q
    |||||| |||||||||||  |||||  ||||  ||| |||||||||||||||||||||  ||||| |||| |||| ||||||||||||    
T  11656695 aaagatagggtgcaaaatcactcaaaaaaaagaatagggggtgcaaaatcgcacaattatcaaaacgatagggggcaaaagtgcaatt 11656608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 124
Target Start/End: Original strand, 30388242 - 30388290
Alignment:
Q  77 ggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 124  Q
    ||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  30388242 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 30388290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 1e-50; HSPs: 73)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 2639408 - 2639541
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||||||||||||    
T  2639408 ctaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaa 2639507  T
Q  101 aagatatgggggaaaagtgcaattaagcctatat 134  Q
    |||||| ||| |||||||||||||||||||||||    
T  2639508 aagataggggtgaaaagtgcaattaagcctatat 2639541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 26842164 - 26842292
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||||||||||||    
T  26842164 ctaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaa 26842263  T
Q  101 aagatatgggggaaaagtgcaattaagcc 129  Q
    |||||| ||| |||||||||| |||||||    
T  26842264 aagataggggtgaaaagtgcacttaagcc 26842292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 9 - 131
Target Start/End: Complemental strand, 26841707 - 26841585
Alignment:
Q  9 catggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatg 108  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| |||||||||||||||||||||||||||||||||| |    
T  26841707 catggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagatagg 26841608  T
Q  109 ggggaaaagtgcaattaagccta 131  Q
    || ||||||||||||||||||||    
T  26841607 ggtgaaaagtgcaattaagccta 26841585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 2638937 - 2638819
Alignment:
Q  12 ggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggg 111  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||| |||     
T  2638937 ggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggt 2638838  T
Q  112 gaaaagtgcaattaagcct 130  Q
    ||||| |||||||||||||    
T  2638837 gaaaaatgcaattaagcct 2638819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 7591328 - 7591204
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    |||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||||||||||||    
T  7591328 ctaaaacacatggggg-cctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaa 7591230  T
Q  101 aagatatgggggaaaagtgcaattaa 126  Q
    |||||| ||| ||||||| |||||||    
T  7591229 aagataggggtgaaaagtacaattaa 7591204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 18296196 - 18296077
Alignment:
Q  9 catggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatg 108  Q
    |||||||||||| |||| |||||| |||||||||||||||||||||||| ||||  ||||||| |||||||||||||||||||||||||||||||||| |    
T  18296196 catggggggcctccaaatcagaaaaggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagatagg 18296097  T
Q  109 ggggaaaagtgcaattaagc 128  Q
    || ||||||| |||||||||    
T  18296096 ggtgaaaagtacaattaagc 18296077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 30191026 - 30190920
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  30191026 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaatta 30190927  T
Q  126 agcctat 132  Q
    |||||||    
T  30190926 agcctat 30190920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 24832432 - 24832330
Alignment:
Q  29 gaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 127  Q
    ||||||||| |||||||||||||||||||| ||||||  ||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  24832432 gaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaag 24832333  T
Q  128 cct 130  Q
    |||    
T  24832332 cct 24832330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 38 - 139
Target Start/End: Original strand, 20347427 - 20347528
Alignment:
Q  38 aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatattat 137  Q
    ||||||||||||||||||||  |||||  ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  20347427 aaaaagatggggtgcaaaatccctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcctttattat 20347526  T
Q  138 at 139  Q
    ||    
T  20347527 at 20347528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 6171408 - 6171511
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | ||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  6171408 cagaaagggggcaaaaagatggggtgcaaaattgctcaaaaaaaaaga-ggggtgcaaaatcccacaattggcaaaagataggggggaaaagtgcaatta 6171506  T
Q  126 agcct 130  Q
    |||||    
T  6171507 agcct 6171511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 33 - 130
Target Start/End: Complemental strand, 11883719 - 11883622
Alignment:
Q  33 gggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    |||| ||||||||| |||||||||| ||||||  ||||| | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  11883719 ggggcaaaaagatgaggtgcaaaattgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcct 11883622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 129
Target Start/End: Original strand, 7591788 - 7591904
Alignment:
Q  13 gggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatggggg 112  Q
    |||||||| |||| |||||||||||||||| ||| |||||||||| ||||  ||||||| |||||||||||||||||||||||| ||||||||| | | |    
T  7591788 gggggcctccaaatcagaaagggggaaaaaaatgaggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattgacaaaagataggagtg 7591887  T
Q  113 aaaagtgcaattaagcc 129  Q
    |||  ||||||||||||    
T  7591888 aaagatgcaattaagcc 7591904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 32673107 - 32673202
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatatt 135  Q
    ||||||||||||||||||| ||||||  ||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||| ||| ||||    
T  32673107 aaaagatggggtgcaaaatcgctcaaaaaaaaatagggggtgcaaaatcgcacaattggcaaaagata-ggggaaaaagtgcaattaaacctttatt 32673202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 40469680 - 40469780
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | ||||||||||||||||||||| |||||||||| |||| |||||||||||||    
T  40469680 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaatta 40469779  T
Q  126 a 126  Q
    |    
T  40469780 a 40469780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 11883890 - 11883980
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||||| ||||||||| ||||||  ||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  11883890 aaaagatggagtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 11883980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 8851250 - 8851151
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  8851250 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 8851151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 7664350 - 7664245
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| |||||||||||||||||||||||||  |||  ||| |||||||||||||||||||    
T  7664350 cagaaagggggaaaattatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaa 7664251  T
Q  127 gcctat 132  Q
    ||||||    
T  7664250 gcctat 7664245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 18296685 - 18296748
Alignment:
Q  67 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  18296685 aaaaagatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 18296748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 26692772 - 26692871
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  |||  ||||||||||||||||||    
T  26692772 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaa 26692871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 51 - 130
Target Start/End: Complemental strand, 37720282 - 37720203
Alignment:
Q  51 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  37720282 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 37720203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 7664625 - 7664727
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| || ||||||||||||||||    
T  7664625 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaa 7664724  T
Q  127 gcc 129  Q
    |||    
T  7664725 gcc 7664727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 16910905 - 16910827
Alignment:
Q  51 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||    
T  16910905 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactacatgggggaaaagtgcaattaagcc 16910827  T

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Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 30191189 - 30191279
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||| ||||||||||| ||||||  ||||| | |||||||||||||||||||||   |||||||| ||||||||||||||||||||||    
T  30191189 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaagcc 30191279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18296648 - 18296713
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaatt 66  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| || |||||    
T  18296648 ctaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgcacaatt 18296713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 5379896 - 5380016
Alignment:
Q  12 ggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggg 111  Q
    ||||| || ||||| ||||||||||| |||| || ||| ||||||| || |  || ||| || ||||||||||||||||||||||| |||  ||| ||||    
T  5379896 gggggaccatcaaatcagaaagggggtaaaatatagggggcaaaatcgcacgttttaaactacggggtgcaaaatcgcacaattggtaaactataggggg 5379995  T
Q  112 gaaaagtgcaattaagcctat 132  Q
    |||||||||||||||||||||    
T  5379996 gaaaagtgcaattaagcctat 5380016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 6325299 - 6325399
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||| ||||||||  || ||| ||||||| ||||  |||| | |||| |||||||||||||||||||||||||  |||||||||||||||||||||||    
T  6325299 cagaaatggggaaaactatagggggcaaaatcgctcgtttaatactatgaggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaa 6325398  T
Q  127 g 127  Q
    |    
T  6325399 g 6325399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 130
Target Start/End: Original strand, 8851541 - 8851637
Alignment:
Q  34 ggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||||||    
T  8851541 ggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 8851637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 17851042 - 17850978
Alignment:
Q  65 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||||| ||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  17851042 ttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 17850978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 41790864 - 41790968
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||| |||||||  || ||| ||||||| ||||  || |||  |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  41790864 cagaaagagggaaaactatagggggcaaaatcgctcgttttaaacaatggggggcaaaatcgcacaattggcaaaatataggggggaaaagtgcaattaa 41790963  T
Q  127 gccta 131  Q
    |||||    
T  41790964 gccta 41790968  T

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Target: chr2; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 5378778 - 5378659
Alignment:
Q  12 ggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggg 111  Q
    ||||| || ||||| ||||||| ||| |||| || ||| ||||||| || |  || ||| || |||||||||||||||||||||||||||  ||| ||||    
T  5378778 gggggaccatcaaatcagaaagagggtaaaatatagggggcaaaatcgcacgttttaaactacggggtgcaaaatcgcacaattggcaaactataggggg 5378679  T
Q  112 gaaaagtgcaattaagccta 131  Q
    ||||||||||||||||||||    
T  5378678 gaaaagtgcaattaagccta 5378659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 38490780 - 38490894
Alignment:
Q  14 ggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatggggga 113  Q
    |||||||| ||| || |||||||||||||||||||||||||||| ||||  ||||||  ||| | ||||||||||||||||||| |||  ||| ||| |     
T  38490780 ggggccttgaaatcataaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaccatgagatgcaaaatcgcacaattggtaaactata-gggagg 38490878  T
Q  114 aaagtgcaattaagcc 129  Q
    ||||||||||||||||    
T  38490879 aaagtgcaattaagcc 38490894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 39 - 133
Target Start/End: Complemental strand, 20347252 - 20347159
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctata 133  Q
    ||||||| ||||||||||| ||||||  ||||| | |||||||||||||||||||||  |||||||||  ||||||||||| |||||||||||||    
T  20347252 aaaagatagggtgcaaaatcgctcaaaaaaaaaga-ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgtaattaagcctata 20347159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 40469517 - 40469427
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||| ||||||||||| ||||||  ||||| | ||||||||||||||||||||| |||||||||| | ||||||| | ||||||||||    
T  40469517 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggagggaaaaatacaattaagcc 40469427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 33 - 127
Target Start/End: Complemental strand, 15321486 - 15321394
Alignment:
Q  33 gggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 127  Q
    |||| |||||||||||||||||||| ||||||   |||||| ||| |||||||| ||||||||  |||||||||  |||||||||||||||||||    
T  15321486 ggggcaaaaagatggggtgcaaaatcgctcaaaataaaataggggatgcaaaattgcacaattaacaaaagata--ggggaaaagtgcaattaag 15321394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 15920867 - 15920781
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||  ||||||||| | |||||||||| ||||||    
T  15920867 aaaagatggggtgcaaaattgctcaaa-aaaaagagggggtgcaaaatcgcacaattaacaaaagataggagggaaaagtgaaattaa 15920781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 18055150 - 18055050
Alignment:
Q  24 aaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaat 123  Q
    |||||||||||||  |||| |||||||||||||| ||| ||  ||||| | ||||||||||||||||||||| ||||||| || ||||||||||||||||    
T  18055150 aaccagaaaggggacaaaaaatggggtgcaaaatcgctaaaa-aaaaagagggggtgcaaaatcgcacaattagcaaaag-ta-gggggaaaagtgcaat 18055054  T
Q  124 taag 127  Q
    ||||    
T  18055053 taag 18055050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 26737732 - 26737835
Alignment:
Q  27 cagaaagggggaaaaag-atggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| ||||| |||||||| |||||  |||||  |||||   |||||||||||||||||| || |||||||||| ||| ||||||||||||||    
T  26737732 cagaaagggggcaaaaggatggggtgtaaaatctctcaaaaaaaaaagaggggtgcaaaatcgcacagttagcaaaagataggggtgaaaagtgcaatta 26737831  T
Q  126 agcc 129  Q
    ||||    
T  26737832 agcc 26737835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 122
Target Start/End: Complemental strand, 6325033 - 6324924
Alignment:
Q  13 gggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatggggg 112  Q
    ||||||| | ||| ||||||| |||||||  || |||  |||||| ||||  |||||| |||||| |||||||||||||||||||||||  ||| |||||    
T  6325033 gggggccataaaatcagaaagagggaaaactataggggacaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactatagggggg 6324934  T
Q  113 aaaagtgcaa 122  Q
    ||||||||||    
T  6324933 aaaagtgcaa 6324924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 16911221 - 16911321
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || |||  |||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| ||||  |||||||||||||    
T  16911221 cagaaagggggaaaactataggggacaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactata-ggggcgaaagtgcaattaa 16911319  T
Q  127 gc 128  Q
    ||    
T  16911320 gc 16911321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 130
Target Start/End: Original strand, 6495687 - 6495776
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||||  ||||||||| ||||||  ||||| | | |||||||||||||||||||  ||||||||| || ||||||||||||||||||||    
T  6495687 aaaagatgacgtgcaaaatcgctcaa--aaaaaaaggaggtgcaaaatcgcacaattcacaaaagatagggaggaaaagtgcaattaagcct 6495776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 26737569 - 26737481
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||||||||||||||| | | ||  ||||| | ||||||||||||||||||||| ||||||||||  || |||||||||||||||||||    
T  26737569 aaaagatggggtgcaaaatcgttaaaa-aaaaagagggggtgcaaaatcgcacaattagcaaaagata--ggagaaaagtgcaattaagcct 26737481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 5793549 - 5793450
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||| |||||||  || ||| ||||||| ||||  |||||| ||| || |||||||||||||||||||||||  | | |||||||||||||||||||    
T  5793549 cagaaagagggaaaactatagggggcaaaatcgctcgtttaaaactataggatgcaaaatcgcacaattggcaaactacaagggggaaaagtgcaattaa 5793450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 17851354 - 17851457
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||| ||||||||||||||||||||  |||   |  ||||||||||||||    
T  17851354 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgtaaaatcgcacaattggcaaactataaaagaaaaaagtgcaattaa 17851453  T
Q  127 gcct 130  Q
    ||||    
T  17851454 gcct 17851457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 26692498 - 26692399
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||| ||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  |||  ||| ||||||||||||||    
T  26692498 cagaaaggggaaaaattatagggagcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagagggaaaaagtgcaattaa 26692399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 126
Target Start/End: Original strand, 43495441 - 43495535
Alignment:
Q  33 gggggaaaaagatggggtgcaaaatagctcaattaaa-aatatggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaattaa 126  Q
    ||||| ||| ||||||||||||||| ||||||  ||| || | |||||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  43495441 gggggcaaatgatggggtgcaaaattgctcaaaaaaataagagggggtgcaaaatcgcacaattgacaaaaagata-gggggaaaagtgcaattaa 43495535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 43495569 - 43495658
Alignment:
Q  38 aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||||||||||||||||||| ||||||  ||||| | ||| ||||||||||||||||| |||||| ||| || || ||||||||||||||||    
T  43495569 aaaaagatggggtgcaaaatcgctcaa-aaaaaagaggggatgcaaaatcgcacaattagcaaaatata-ggtgggaaagtgcaattaagcc 43495658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 6171245 - 6171156
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||| |||||||||||  |||||  ||||| |   |||||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  6171245 aaaagatagggtgcaaaatcactcaaaaaaaaaaaaaaggtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcc 6171156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 32672932 - 32672842
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||| ||||||||||| ||||||  ||||| |  ||||||||||||||||||||  ||||||||| ||   |||||||||||||||||    
T  32672932 aaaagatagggtgcaaaatcgctcaaaaaaaaagagagggtgcaaaatcgcacaattaacaaaagataaggaacaaaagtgcaattaagcc 32672842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 7979667 - 7979565
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||| |||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||   |||  |||||||||||||| ||    
T  7979667 cagaaagagggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgtcaaa--ctataagggaaaagtgcaataaa 7979570  T
Q  127 gccta 131  Q
    |||||    
T  7979569 gccta 7979565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 128
Target Start/End: Original strand, 18750102 - 18750178
Alignment:
Q  51 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 128  Q
    ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||| ||||||||||||||    
T  18750102 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactata-gggggagaagtgcaattaagc 18750178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 19141801 - 19141898
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  || ||| |||||| |||||||||||||||||||||||   ||| |||| |||||||||||||    
T  19141801 cagaaagggggaaaactatagggggcaaaatcgctcgttttaaactatgggatgcaaaatcgcacaattggcaaa--ctatagggggaaagtgcaattaa 19141898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 18055309 - 18055367
Alignment:
Q  68 aaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||| |||||||||||||||||||||||| |||||| ||  ||| ||||||||||||||    
T  18055309 aaaagatggggtgcaaaatcgcacaattgacaaaaggtagagggaaaaagtgcaattaa 18055367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 19141507 - 19141446
Alignment:
Q  65 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 127  Q
    |||||| ||||||||||||||| ||||||||||||||  ||| |||| |||||||||||||||    
T  19141507 ttaaaactatggggtgcaaaat-gcacaattggcaaactatagggggaaaaagtgcaattaag 19141446  T

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Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 29230334 - 29230280
Alignment:
Q  77 ggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    ||||||||||| |||||||| |||||||||  | |||||||||||||||||||||    
T  29230334 ggtgcaaaatcacacaattgacaaaagatagagaggaaaagtgcaattaagccta 29230280  T

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Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 7979993 - 7980057
Alignment:
Q  65 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    |||||| |||||||||||||||||||||||| |||||  ||| | || ||||||||||||||||||    
T  7979993 ttaaaactatggggtgcaaaatcgcacaattagcaaactata-gaggaaaaagtgcaattaagcct 7980057  T

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Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 15321600 - 15321515
Alignment:
Q  42 agatggggtgcaaaatagctcaattaaa-aatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||| ||||||  ||| || |  ||||||||||||||||| |||| |||||||| |||  ||||||||||||||    
T  15321600 agatggggtgcaaaatcgctcaaaaaaagaagagagggtgcaaaatcgcacagttggaaaaagataggggacaaaagtgcaattaa 15321515  T

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Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 126
Target Start/End: Complemental strand, 17345822 - 17345736
Alignment:
Q  38 aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||| |||||||||||  |||||   |||| | |||||||||||| ||| |||| ||||||||||  ||||||||||||||||||    
T  17345822 aaaaagatagggtgcaaaatcactcaaaataaaagagggggtgcaaaattgcataattagcaaaagata--ggggaaaagtgcaattaa 17345736  T

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Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 31641598 - 31641545
Alignment:
Q  13 gggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaatt 66  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||| || |||||    
T  31641598 gggggccttcaaaccagaaaggggggaaaggatggagtgcaaaatcgcacaatt 31641545  T

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Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 17345999 - 17346090
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    |||| ||||| |||||||| ||||||  | ||| | | ||||||||||||||||||| ||||||||||   || |||||||||||||||||||    
T  17345999 aaaatatgggatgcaaaatcgctcaaaaataaagaggaggtgcaaaatcgcacaattagcaaaagata-aaggaaaaagtgcaattaagccta 17346090  T

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Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 18055257 - 18055169
Alignment:
Q  40 aaagatggggtgcaaaatagctcaattaaa-aatatggggtgcaaaatcgcacaattggcaaaa-gatatgggggaaaagtgcaattaa 126  Q
    ||||||||| |||||||| ||||||  ||| || | ||||||||||||||||||||||||||||  ||| || | ||||||||||||||    
T  18055257 aaagatgggatgcaaaatcgctcaaaaaaataagagggggtgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 18055169  T

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Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 40221364 - 40221313
Alignment:
Q  77 ggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||||||||||| |||||| |||||||||| |||||||| |||||||||||||    
T  40221364 ggtgcaaaatcgaacaattagcaaaagata-gggggaaaggtgcaattaagcc 40221313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 40221446 - 40221538
Alignment:
Q  34 ggggaaaaagatggggtgcaaaatagctcaattaaa-aatatggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 124  Q
    |||| |||||||| |||||||||| ||||||  ||| || | ||||||||||||||||||||| || |||||||| |||| ||||| ||||||    
T  40221446 ggggcaaaagatgaggtgcaaaatcgctcaaaaaaagaagaaggggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagcgcaatt 40221538  T

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Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 124
Target Start/End: Original strand, 40469607 - 40469655
Alignment:
Q  77 ggtgcaaaatcgcacaattggcaaaa-gatatgggggaaaagtgcaatt 124  Q
    ||||||||||||||||||| |||||| |||| |||||||||||||||||    
T  40469607 ggtgcaaaatcgcacaattagcaaaacgataagggggaaaagtgcaatt 40469655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 43495356 - 43495308
Alignment:
Q  82 aaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    |||||||||||||| |||||| ||| | |||||||||||||||||||||    
T  43495356 aaaatcgcacaattagcaaaatataggtgggaaaagtgcaattaagcct 43495308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 133
Target Start/End: Original strand, 40221545 - 40221631
Alignment:
Q  40 aaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctata 133  Q
    |||||||||||||||||| ||||||  ||||| |||||||        |||||||| |||||||||||| || |||||||||||||| ||||||    
T  40221545 aaagatggggtgcaaaatcgctcaaaaaaaaagatggggtt-------gcacaattagcaaaagatatgaggaaaaagtgcaattaaacctata 40221631  T

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Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 41790592 - 41790494
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||| ||||||  || ||| ||||||| ||||  || |||  |||||||||||||||||||||||| ||||  ||| ||||||||| |||||||||    
T  41790592 cagaaaggaggaaaactatagggggcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattgacaaactata-gggggaaaaatgcaattaa 41790494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 26737657 - 26737706
Alignment:
Q  76 gggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 124  Q
    |||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  26737657 gggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 26737706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 126
Target Start/End: Complemental strand, 29343633 - 29343584
Alignment:
Q  77 ggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||||||| |||||||| |||||||||  | ||||||||||||||||    
T  29343633 ggtgcaaaatcacacaattgacaaaagatagagaggaaaagtgcaattaa 29343584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 32673020 - 32673069
Alignment:
Q  76 gggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 124  Q
    |||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  32673020 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 32673069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 6495519 - 6495468
Alignment:
Q  76 gggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 128  Q
    ||||||||||||||||||||  |||| |||| || ||||||||||||||||||    
T  6495519 gggtgcaaaatcgcacaattaacaaa-gatagggaggaaaagtgcaattaagc 6495468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 124
Target Start/End: Complemental strand, 11883799 - 11883751
Alignment:
Q  77 ggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 124  Q
    ||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  11883799 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 11883751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 29230562 - 29230602
Alignment:
Q  92 aattggcaaaagatatgggggaaaagtgcaattaagcctat 132  Q
    ||||| |||||||||||| |||||| |||||||||||||||    
T  29230562 aattgacaaaagatatggaggaaaaatgcaattaagcctat 29230602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 29343861 - 29343901
Alignment:
Q  92 aattggcaaaagatatgggggaaaagtgcaattaagcctat 132  Q
    ||||| |||||||||||| |||||| |||||||||||||||    
T  29343861 aattgacaaaagatatggaggaaaaatgcaattaagcctat 29343901  T

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Target: chr7 (Bit Score: 97; Significance: 1e-47; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 44599617 - 44599489
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||||||||||||    
T  44599617 ctaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaa 44599518  T
Q  101 aagatatgggggaaaagtgcaattaagcc 129  Q
    |||||| ||| ||||||||||||||||||    
T  44599517 aagataggggtgaaaagtgcaattaagcc 44599489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 13863441 - 13863311
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||||||||||||    
T  13863441 ctaaaacacatggggggcctccaaatcagaaagagggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaa 13863342  T
Q  101 aagatatgggggaaaagtgcaattaagccta 131  Q
    |||||| ||| ||||| ||||||||||||||    
T  13863341 aagataggggtgaaaaatgcaattaagccta 13863311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 130
Target Start/End: Original strand, 44600069 - 44600190
Alignment:
Q  9 catggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatg 108  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| |||||||||||||||||||||||||||||||||| |    
T  44600069 catggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagatagg 44600168  T
Q  109 ggggaaaagtgcaattaagcct 130  Q
    || |||||||||||||||||||    
T  44600169 ggtgaaaagtgcaattaagcct 44600190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 13863884 - 13864011
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    ||||||||||| |||| ||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||    
T  13863884 ctaaaacacatcgggg-cctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgc-aaatcgcacaattggcaa 13863981  T
Q  101 aagatatgggggaaaagtgcaattaagcct 130  Q
    |||||| ||| |||||||||||||||||||    
T  13863982 aagataggggtgaaaagtgcaattaagcct 13864011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 8643693 - 8643822
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    ||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||| ||||  |||| || ||||||||||||||||||||||||| ||    
T  8643693 ctaaaacacatagggg-ccttcaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaataacatggggtgcaaaatcgcacaattggtaa 8643791  T
Q  101 aagatatgggggaaaagtgcaattaagccta 131  Q
    |||||| ||  ||||||||||||||||||||    
T  8643792 aagatagggatgaaaagtgcaattaagccta 8643822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 46816249 - 46816376
Alignment:
Q  13 gggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatggggg 112  Q
    |||||||||||||||||||||||| |||| |||||||| |||||| ||||  |||||||||||||||||||||||||| |||||| ||||||||  |||     
T  46816249 gggggccttcaaaccagaaaggggaaaaatgatggggtacaaaatcgctcgtttaaaaatatggggtgcaaaatcgcataattggtaaaagatagcggga 46816348  T
Q  113 aaaagtgcaattaagcctatattatata 140  Q
    ||||||||||||||||||| ||| ||||    
T  46816349 aaaagtgcaattaagcctaaattttata 46816376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 9412278 - 9412381
Alignment:
Q  29 gaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 127  Q
    ||||||||| |||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9412278 gaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 9412377  T
Q  128 ccta 131  Q
    ||||    
T  9412378 ccta 9412381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 135
Target Start/End: Original strand, 3687608 - 3687716
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3687608 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaa-aaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaatta 3687706  T
Q  126 agcctatatt 135  Q
    |||| |||||    
T  3687707 agccaatatt 3687716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 10533136 - 10533032
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  10533136 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 10533037  T
Q  127 gccta 131  Q
    |||||    
T  10533036 gccta 10533032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 135
Target Start/End: Original strand, 37889211 - 37889319
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||||| |||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  37889211 cagaaagggagaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 37889310  T
Q  127 gcctatatt 135  Q
    |||||||||    
T  37889311 gcctatatt 37889319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 17157069 - 17156966
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||| |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  17157069 cagaaagggggaaaactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 17156970  T
Q  127 gcct 130  Q
    ||||    
T  17156969 gcct 17156966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 37888935 - 37888833
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  37888935 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 37888836  T
Q  127 gcc 129  Q
    |||    
T  37888835 gcc 37888833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 37972350 - 37972451
Alignment:
Q  29 gaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 128  Q
    |||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  37972350 gaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagc 37972449  T
Q  129 ct 130  Q
    ||    
T  37972450 ct 37972451  T

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Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 20419276 - 20419379
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  20419276 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 20419375  T
Q  127 gcct 130  Q
    ||||    
T  20419376 gcct 20419379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 22740258 - 22740155
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  22740258 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 22740159  T
Q  127 gcct 130  Q
    ||||    
T  22740158 gcct 22740155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 20418990 - 20418886
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||||| |||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  20418990 cagaaagggtgaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 20418891  T
Q  127 gccta 131  Q
     ||||    
T  20418890 accta 20418886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 3205045 - 3205148
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| || |||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  3205045 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactacggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 3205144  T
Q  127 gcct 130  Q
    ||||    
T  3205145 gcct 3205148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 9035244 - 9035347
Alignment:
Q  27 cagaaagggg-gaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    |||||||||| |||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| ||||||||||||||||||    
T  9035244 cagaaaggggagaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaatta 9035343  T
Q  126 agcc 129  Q
    ||||    
T  9035344 agcc 9035347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 9412113 - 9412022
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||| ||||| ||||| ||||||  ||||| | |||||||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  9412113 aaaagatagggtggaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcct 9412022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 18864069 - 18863970
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  18864069 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 18863970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 9034970 - 9034865
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatgggg-tgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||| |||| ||||||||||||||||||  ||| ||||||||||||||||||    
T  9034970 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggggtgcagaatcgcacaattggcaaattataggggggaaaagtgcaatta 9034871  T
Q  126 agccta 131  Q
    ||||||    
T  9034870 agccta 9034865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 130
Target Start/End: Original strand, 13744188 - 13744287
Alignment:
Q  30 aaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| ||||||||||||||||||||||    
T  13744188 aaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaagcc 13744286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 18864354 - 18864457
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| |||| |||||||||||||||||||||||||  ||| ||||||||||| |||||||    
T  18864354 cagaaagggggaaaactatagggggcaaaatcgctcttttaaaactatgaggtgcaaaatcgcacaattggcaaactata-gggggaaaagtacaattaa 18864452  T
Q  127 gccta 131  Q
    |||||    
T  18864453 gccta 18864457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 37972062 - 37971958
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||| ||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  | | ||| |||||||||||||||    
T  37972062 cagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactacaggggagaaaagtgcaattaa 37971963  T
Q  127 gccta 131  Q
    |||||    
T  37971962 gccta 37971958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 29293024 - 29292921
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  || |||  ||||| |||||||||||||||||||||||  ||| |||||||||||||||||||    
T  29293024 cagaaagggggaaaactatagggggcaaaatcgctcgttttaaacaatgggatgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 29292925  T
Q  127 gcct 130  Q
    ||||    
T  29292924 gcct 29292921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 13741659 - 13741557
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||| |||||||  || ||| ||||||| ||||  |||||| |||||||||||||||||||||||||| |||  ||| ||||||||| |||||||||    
T  13741659 cagaaagtgggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggtaaactataggggggaaaaatgcaattaa 13741560  T
Q  127 gcc 129  Q
    |||    
T  13741559 gcc 13741557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 15567246 - 15567331
Alignment:
Q  47 gggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatatt 135  Q
    ||||||||||| ||||||  ||||||||| ||||||||||||||| |   |||||||||| ||||||||||||||||||| ||||||||    
T  15567246 gggtgcaaaatcgctcaaaaaaaaatatgcggtgcaaaatcgcacta---gcaaaagataggggggaaaagtgcaattaaacctatatt 15567331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 36527750 - 36527852
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| |||||| |||||||||||| ||||||||||  ||||| ||||||| |||||||||    
T  36527750 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcataattggcaaactatatgagggaaaaatgcaattaa 36527849  T
Q  127 gcc 129  Q
    |||    
T  36527850 gcc 36527852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 23686683 - 23686773
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    ||||||||||||||||||| |||| |  ||||| | ||||| ||||||||||||||| |||||||||| |||| |||||||||||||||||||    
T  23686683 aaaagatggggtgcaaaatcgctccaaaaaaaaga-ggggt-caaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccta 23686773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 3204769 - 3204669
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||| |||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||   ||| |||| |||||||||||||    
T  3204769 cagaaagagggaaaactatagggggcaaaattgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa--ctatagggggaaagtgcaattaa 3204672  T
Q  127 gcc 129  Q
    |||    
T  3204671 gcc 3204669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 13772702 - 13772639
Alignment:
Q  68 aaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    |||| ||||||||||||||| ||||||| |||||||||| || |||||||||||||||||||||    
T  13772702 aaaagatggggtgcaaaatcacacaattagcaaaagatagggaggaaaagtgcaattaagccta 13772639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 13772872 - 13772955
Alignment:
Q  47 gggtgcaaaatagctcaattaaaaat-atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||||||| ||||||  |||||  | ||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||    
T  13772872 gggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcgcacaattagcaaatgataggggggaaaagtgcaattaagcc 13772955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 63 - 130
Target Start/End: Original strand, 16198965 - 16199032
Alignment:
Q  63 aattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    |||||||| ||||||||||||||||||||||||||||||  |||  ||| ||||||||||||||||||    
T  16198965 aattaaaactatggggtgcaaaatcgcacaattggcaaactataatgggaaaaagtgcaattaagcct 16199032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 29293298 - 29293400
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  || |||  |||| ||||||||||||||||||||||||  ||| ||||||||| |||||||||    
T  29293298 cagaaagggggaaaactatagggggcaaaatcgctcgttttaaacaatggagtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaa 29293397  T
Q  127 gcc 129  Q
    |||    
T  29293398 gcc 29293400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 42418980 - 42419085
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatgggg-tgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||| ||||||| |||||||||||||||  ||| ||||||||||||||||||    
T  42418980 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggggtgcaaaaacgcacaattggcaaactata-gggggaaaagtgcaatta 42419078  T
Q  126 agcctat 132  Q
    | |||||    
T  42419079 aacctat 42419085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 3687445 - 3687353
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaat-atggggtgcaaaatcgcacaattggcaaaagata-tgggggaaaagtgcaattaagcc 129  Q
    ||||||| ||||||||||| ||||||  |||||  | |||||||||||||||||||||  |||||||||  ||||||||||||||||||||||    
T  3687445 aaaagatagggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagatagggggggaaaagtgcaattaagcc 3687353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 22740550 - 22740641
Alignment:
Q  34 ggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  22740550 ggggaaaactatagggagcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaa 22740641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 48359383 - 48359320
Alignment:
Q  65 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||||| ||||||||||||||||||||||||| ||||  ||| ||||||||||||||||||||||    
T  48359383 ttaaaactatggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaagcc 48359320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 128
Target Start/End: Complemental strand, 5735344 - 5735253
Alignment:
Q  38 aaaaagatggggtgcaaaatagctcaattaaaaatatggg-gtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 128  Q
    ||||||||| |||||||||| ||||||  ||||| |  || |||||||||||||||||| || ||||||| ||| |||||||||||||||||    
T  5735344 aaaaagatgtggtgcaaaatcgctcaaaaaaaaaaaaaggagtgcaaaatcgcacaattagccaaagataggggagaaaagtgcaattaagc 5735253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 27096306 - 27096392
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||| |||||||||||||| ||||||  || || | ||| ||||||||| |||||||| ||||||||| |||||||||||||||||||    
T  27096306 aaaatatggggtgcaaaatcgctcaaaaaagaagaggggatgcaaaatcacacaattgacaaaagata-gggggaaaagtgcaattaa 27096392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 27181997 - 27181911
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||| |||||||||||||| ||||||  || || | ||| ||||||||| |||||||| ||||||||| |||||||||||||||||||    
T  27181997 aaaatatggggtgcaaaatcgctcaaaaaagaagaggggatgcaaaatcacacaattgacaaaagata-gggggaaaagtgcaattaa 27181911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 38826865 - 38826968
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||  | ||  |||||| |||| |||||||||||||||||||| ||||  ||| ||||||||| |||||||||    
T  38826865 cagaaagggggaaaactatagggggcaaaaccgttcgtttaaaactatgaggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaa 38826964  T
Q  127 gcct 130  Q
    ||||    
T  38826965 gcct 38826968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 23686525 - 23686421
Alignment:
Q  24 aaccagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaa 122  Q
    ||||||||| |||| ||||||||||| |||||||| ||||||  ||| | |  ||||||||||| | |||||| |||||||||| |||||||||||||||    
T  23686525 aaccagaaatggggcaaaaagatggg-tgcaaaatcgctcaaaaaaatagagagggtgcaaaattgtacaattagcaaaagata-gggggaaaagtgcaa 23686428  T
Q  123 ttaagcc 129  Q
    |||||||    
T  23686427 ttaagcc 23686421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 126
Target Start/End: Complemental strand, 27096262 - 27096168
Alignment:
Q  33 gggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattgg-caaaagatatgggggaaaagtgcaattaa 126  Q
    ||||| ||||||| ||||| ||||| ||||||  ||||| | ||| |||||||||||||||||||  |||||||| |||| ||||||||||||||    
T  27096262 gggggcaaaagatagggtgaaaaattgctcaaaaaaaaagaggggttgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaattaa 27096168  T

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Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 126
Target Start/End: Original strand, 27182041 - 27182135
Alignment:
Q  33 gggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattgg-caaaagatatgggggaaaagtgcaattaa 126  Q
    ||||| ||||||| ||||| ||||| ||||||  ||||| | ||| |||||||||||||||||||  |||||||| |||| ||||||||||||||    
T  27182041 gggggcaaaagatagggtgaaaaattgctcaaaaaaaaagaggggttgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaattaa 27182135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 38191367 - 38191265
Alignment:
Q  24 aaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaat 123  Q
    |||| |||||||||||||||||||| |||||||  ||| ||  ||||| |  || |||||||||||| |||| ||||||||||  | |||||||||||||    
T  38191367 aacccgaaagggggaaaaagatgggatgcaaaagcgctaaaaaaaaaaaagaggatgcaaaatcgcataattagcaaaagataaagaggaaaagtgcaat 38191268  T
Q  124 taa 126  Q
    |||    
T  38191267 taa 38191265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 42418692 - 42418590
Alignment:
Q  28 agaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 127  Q
    ||||||||||||||  || ||| ||||||| ||||  |||||| ||| || | ||||||||||||||| |||||  ||| |||||||||||| |||||||    
T  42418692 agaaagggggaaaactatagggggcaaaatcgctcgtttaaaactataggatacaaaatcgcacaattagcaaactataggggggaaaagtgaaattaag 42418593  T
Q  128 cct 130  Q
    |||    
T  42418592 cct 42418590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 33628653 - 33628718
Alignment:
Q  68 aaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctata 133  Q
    |||| ||||||||||||||||||||||| | ||||||||  ||| |||||||||||| ||||||||    
T  33628653 aaaagatggggtgcaaaatcgcacaattagtaaaagatagagggaaaaagtgcaatttagcctata 33628718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 39 - 131
Target Start/End: Complemental strand, 6908302 - 6908211
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    ||||||| | ||||||||| ||| ||  ||||| |  ||||||||||||||||||||  ||| ||||| ||||||||||||||||||||||||    
T  6908302 aaaagatagagtgcaaaatcgctaaaaaaaaaaaaaagggtgcaaaatcgcacaattaacaatagata-gggggaaaagtgcaattaagccta 6908211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 15567079 - 15567019
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaa 102  Q
    ||||||||||||||||||| ||||||  ||||||| ||||||||||||||||||||| ||||||    
T  15567079 aaaagatggggtgcaaaatcgctcaa--aaaaata-ggggtgcaaaatcgcacaattagcaaaa 15567019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 39 - 127
Target Start/End: Complemental strand, 29291896 - 29291808
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 127  Q
    ||||||||||||| ||||| |||| |  ||||| | |||||||||||||||| ||||  ||||||||| || | |||||||||||||||    
T  29291896 aaaagatggggtgtaaaatcgctctaaaaaaaagagggggtgcaaaatcgcataattatcaaaagatagggagaaaaagtgcaattaag 29291808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 48359610 - 48359713
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  || ||| |||| ||||||||||||||||||||| |||  ||| |||| |||||||||||||     
T  48359610 cagaaagggggaaaactatagggggcaaaatcgctcgttttaaactatgtggtgcaaaatcgcacaattggtaaactata-ggggaaaaagtgcaattat 48359708  T
Q  127 gccta 131  Q
    |||||    
T  48359709 gccta 48359713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 129
Target Start/End: Complemental strand, 35080021 - 35079960
Alignment:
Q  67 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||||||  |||||||||| | ||||||| |||||||||| ||||||||||||||||||||||    
T  35080021 aaaaatagtgggtgcaaaaccccacaattagcaaaagata-gggggaaaagtgcaattaagcc 35079960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 129
Target Start/End: Original strand, 5349724 - 5349784
Alignment:
Q  66 taaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||||| |||||||||||||||||||||||  |||||||||   ||| ||||||||||||||||    
T  5349724 taaaaagatggggtgcaaaatcgcacaattaacaaaagata---ggggaaagtgcaattaagcc 5349784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 8953889 - 8953941
Alignment:
Q  75 ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 128  Q
    |||||||||||| ||||||||  ||||||||| |||||||||||||||||||||    
T  8953889 ggggtgcaaaattgcacaattaacaaaagata-gggggaaaagtgcaattaagc 8953941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 18925315 - 18925373
Alignment:
Q  68 aaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 128  Q
    |||| ||||||||||||||||||||||| |||||  |||| | ||||||||||||||||||    
T  18925315 aaaaaatggggtgcaaaatcgcacaattagcaaa--atatagaggaaaagtgcaattaagc 18925373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 129
Target Start/End: Original strand, 29292001 - 29292095
Alignment:
Q  33 gggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||| |||||||| ||||||||||| ||| ||  ||||| | |||||| |||||||||||||| ||||||| ||  ||  |||||||||||||||||    
T  29292001 ggggcaaaaagatagggtgcaaaatcgctaaa--aaaaagagggggtggaaaatcgcacaattagcaaaagttagaggaaaaaagtgcaattaagcc 29292095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 30857902 - 30857959
Alignment:
Q  73 atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    |||||||||||||| ||||||||| ||||||||| | |  ||||||||||||||||||    
T  30857902 atggggtgcaaaattgcacaattgacaaaagataagagacaaaagtgcaattaagcct 30857959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 36527447 - 36527387
Alignment:
Q  65 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||| ||||||||||||||||||||||||| ||||  ||| |||| ||||||||||||||    
T  36527447 ttaaaactatggggtgcaaaatcgcacaattgacaaactata-ggggaaaaagtgcaattaa 36527387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 18925114 - 18925062
Alignment:
Q  77 ggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||||||||| |||||||| |||||||||| ||  ||||||||||||||||||    
T  18925114 ggtgcaaaattgcacaattagcaaaagatagggaagaaaagtgcaattaagcc 18925062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 27096149 - 27096047
Alignment:
Q  24 aaccagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaa 122  Q
    |||||||||||||| ||||| |||||||||||||| ||| ||  |||||    || | ||||||||||||||| |||||| ||| ||||| |||||||||    
T  27096149 aaccagaaagggggcaaaaaaatggggtgcaaaatcgctaaaaaaaaaaa---ggatacaaaatcgcacaattagcaaaatata-ggggggaaagtgcaa 27096054  T
Q  123 ttaagcc 129  Q
    |||||||    
T  27096053 ttaagcc 27096047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 27182154 - 27182256
Alignment:
Q  24 aaccagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaa 122  Q
    |||||||||||||| ||||| |||||||||||||| ||| ||  |||||    || | ||||||||||||||| |||||| ||| ||||| |||||||||    
T  27182154 aaccagaaagggggcaaaaaaatggggtgcaaaatcgctaaaaaaaaaaa---ggatacaaaatcgcacaattagcaaaatata-ggggggaaagtgcaa 27182249  T
Q  123 ttaagcc 129  Q
    |||||||    
T  27182250 ttaagcc 27182256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 125
Target Start/End: Original strand, 18925229 - 18925280
Alignment:
Q  75 ggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatta 125  Q
    |||||||||||||||||||||||| |||||||| |||| |||||| ||||||    
T  18925229 ggggtgcaaaatcgcacaattggcaaaaagatagggggcaaaagttcaatta 18925280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 5349550 - 5349497
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaatt 95  Q
    ||||||||||||||||||| |||||   ||||| | |||||||||||||||||||||    
T  5349550 aaaagatggggtgcaaaatcgctca---aaaaaaagggggtgcaaaatcgcacaatt 5349497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 126
Target Start/End: Original strand, 6908485 - 6908534
Alignment:
Q  76 gggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||||||| |||||| ||| ||||| |||||||||||||    
T  6908485 gggtgcaaaatcgcacaattagcaaaaaata-ggggggaaagtgcaattaa 6908534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 34235778 - 34235737
Alignment:
Q  89 cacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    |||||||||||||||||  | |||||||||||||||||||||    
T  34235778 cacaattggcaaaagatgggagggaaaagtgcaattaagcct 34235737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 38191435 - 38191387
Alignment:
Q  77 ggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatta 125  Q
    |||||||||||||||||||||| |||||||| |||| |||||||||||||    
T  38191435 ggtgcaaaatcgcacaattggcaaaaagata-ggggaaaaagtgcaatta 38191387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 39983753 - 39983700
Alignment:
Q  75 ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 128  Q
    ||||||| |||||||| ||||   |||||||| |||||||||||||||||||||    
T  39983753 ggggtgcgaaatcgcataattaataaaagataagggggaaaagtgcaattaagc 39983700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 33628475 - 33628397
Alignment:
Q  47 gggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 127  Q
    ||||||||||| ||||||  ||||| | ||| |||||||| |||||||| |||||||||| || | |||||||||||||||    
T  33628475 gggtgcaaaatcgctcaaa-aaaaagaggggatgcaaaattgcacaattagcaaaagataaggag-aaaagtgcaattaag 33628397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 34235978 - 34236030
Alignment:
Q  75 ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 127  Q
    ||||||||||||||||||||| ||||||||||   ||||||| | ||||||||    
T  34235978 ggggtgcaaaatcgcacaattagcaaaagatagaagggaaaaatacaattaag 34236030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 35080215 - 35080259
Alignment:
Q  67 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggg 111  Q
    ||||| |||||||||||||||||||||||  ||||||||| ||||    
T  35080215 aaaaagatggggtgcaaaatcgcacaattaacaaaagataagggg 35080259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 2e-46; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 13026763 - 13026633
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||| ||||||||||||||||||||||||    
T  13026763 ctaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatgaggtgcaaaatcgcacaattggcaa 13026664  T
Q  101 aagatatgggggaaaagtgcaattaagccta 131  Q
    |||||| ||| ||||||||||||||||||||    
T  13026663 aagataggggtgaaaagtgcaattaagccta 13026633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 39723974 - 39724102
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    ||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||||||||||||    
T  39723974 ctaaaacacatggagggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaa 39724073  T
Q  101 aagatatgggggaaaagtgcaattaagcc 129  Q
    |||||| ||| ||||||||||||||||||    
T  39724074 aagataggggtgaaaagtgcaattaagcc 39724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 130
Target Start/End: Original strand, 9823295 - 9823416
Alignment:
Q  9 catggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatg 108  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| |||||||||||||||||||||||||||||||||| |    
T  9823295 catggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagatagg 9823394  T
Q  109 ggggaaaagtgcaattaagcct 130  Q
    || |||||||||||||||||||    
T  9823395 ggtgaaaagtgcaattaagcct 9823416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 13027215 - 13027332
Alignment:
Q  9 catggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatg 108  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| |||||||||||||||||||||||||||||||||| |    
T  13027215 catggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagatagg 13027314  T
Q  109 ggggaaaagtgcaattaa 126  Q
    || |||||||||||||||    
T  13027315 ggtgaaaagtgcaattaa 13027332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 22851518 - 22851390
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    ||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||| |||   ||||||| |||||||||||||||||||||||| |||    
T  22851518 ctaaaacacatggagggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgcttgtttaaaaacatggggtgcaaaatcgcacaattgacaa 22851419  T
Q  101 aagatatgggggaaaagtgcaattaagcc 129  Q
    |||||| ||| ||||||||||||||||||    
T  22851418 aagataggggtgaaaagtgcaattaagcc 22851390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 13937316 - 13937447
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||  |||  ||||||| |||||||||||| ||||||||||| |||    
T  13937316 ctaaaacacatgggg-gccttcaaaccagaaagggggaaaaggatgaggtgcaaaatcactcgtttaaaaacatggggtgcaaattcgcacaattgacaa 13937414  T
Q  101 aagatatgggggaaaagtgcaattaagcctata 133  Q
    || ||| ||||||||||||||||||||||||||    
T  13937415 aaaataggggggaaaagtgcaattaagcctata 13937447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 13936833 - 13936722
Alignment:
Q  17 gccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaa 116  Q
    ||||||||| |||||||||| |||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  13936833 gccttcaaatcagaaagggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggtaaaagata-gggggaaaa 13936736  T
Q  117 gtgcaattaagcct 130  Q
    ||||||||||||||    
T  13936735 gtgcaattaagcct 13936722  T

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Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 39723530 - 39723425
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||| ||||||||||||||||||||||    
T  39723530 ctaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatgggatgcaaaatcgcacaattggcaa 39723431  T
Q  101 aagata 106  Q
    ||||||    
T  39723430 aagata 39723425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 3307466 - 3307338
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    ||||||||||| |||||||| |||| ||||||||| ||||||||||||||||||||| |||   ||||||||||||| |||||||||||||||||| |||    
T  3307466 ctaaaacacatagggggcctccaaatcagaaagggagaaaaagatggggtgcaaaatcgcttgtttaaaaatatgggatgcaaaatcgcacaattgacaa 3307367  T
Q  101 aagatatgggggaaaagtgcaattaagcc 129  Q
    |||||| ||| ||||| ||||||||||||    
T  3307366 aagataggggtgaaaaatgcaattaagcc 3307338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 9822876 - 9822748
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    |||||||||||||| ||||| |||| |||||||||||||||||||  |||||||||| ||||  ||||||| ||||||||||||||||||||||||  ||    
T  9822876 ctaaaacacatgggtggcctccaaatcagaaagggggaaaaagatatggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattgataa 9822777  T
Q  101 aagatatgggggaaaagtgcaattaagcc 129  Q
    |||||| ||| ||||||||||||||||||    
T  9822776 aagataggggtgaaaagtgcaattaagcc 9822748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 41662354 - 41662457
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41662354 cagaaagggggcaaaaagatggggtgcaaaatcgctcaataaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaatta 41662453  T
Q  126 agcc 129  Q
    ||||    
T  41662454 agcc 41662457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 6092902 - 6092776
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    |||||||||||||||| |||| ||| | |||| |||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||| |||    
T  6092902 ctaaaacacatggggg-cctttaaatctgaaaaggggaaaaagatggggtgcaaaatcgttcaattaaaaatatgggatgcaaaatcgcacaattgacaa 6092804  T
Q  101 aagatatgggggaaaagtgcaattaagcct 130  Q
    |||||| ||||||||| |||||||||||||    
T  6092803 aagata-gggggaaaa-tgcaattaagcct 6092776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 765835 - 765736
Alignment:
Q  29 gaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 127  Q
    ||||||||| |||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  765835 gaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 765736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 12281225 - 12281123
Alignment:
Q  29 gaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 127  Q
    ||||||||| |||||||||||||||||||| ||||||  ||||| | | |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12281225 gaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagaggaggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 12281126  T
Q  128 cct 130  Q
    |||    
T  12281125 cct 12281123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 15156136 - 15156239
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||||||||||||||||||| ||| ||  ||||| | |||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  15156136 cagaaagggggcaaaaagatggggtgcaaaatcgctaaaaaaaaaagagggggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaatta 15156235  T
Q  126 agcc 129  Q
    ||||    
T  15156236 agcc 15156239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 43245974 - 43245871
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||| | |||||||||||||||||||||  ||||||||| |||| |||||||||||||    
T  43245974 cagaaagggggcaaaaagatggggtgcaaaatcgctcaataaaaaagagggggtgcaaaatcgcacaattatcaaaagatagggggaaaaagtgcaatta 43245875  T
Q  126 agcc 129  Q
    ||||    
T  43245874 agcc 43245871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 15042261 - 15042143
Alignment:
Q  13 gggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatggggg 112  Q
    |||| |||| ||| ||||||||||||||| ||||| ||||||||| ||||| ||||||  || |||||||||||| |||||||||||||||||| |||||    
T  15042261 ggggaccttgaaatcagaaagggggaaaatgatggcgtgcaaaatcgctcatttaaaacaatagggtgcaaaatcacacaattggcaaaagataaggggg 15042162  T
Q  113 aaaagtgcaattaagccta 131  Q
     ||||||||||||| ||||    
T  15042161 gaaagtgcaattaaaccta 15042143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 39 - 131
Target Start/End: Complemental strand, 15155973 - 15155881
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    ||||||| ||||||||||| ||||||  ||||| | |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  15155973 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccta 15155881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 37396810 - 37396706
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||| ||||||  ||| |||||||||||||||||||    
T  37396810 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatcggcaaactataggggggaaaagtgcaattaa 37396711  T
Q  127 gccta 131  Q
    |||||    
T  37396710 gccta 37396706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 37752176 - 37752084
Alignment:
Q  38 aaaaagatggggtgcaaaatagctcaattaaaaat-atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||||||||||||||||||| ||||||  |||||  ||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  37752176 aaaaagatggggtgcaaaatcgctcaaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaacataggggggaaaagtgcaattaagcc 37752084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 145
Target Start/End: Complemental strand, 16929043 - 16928926
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||||||||||||||||||  ||||||  ||||| | ||||||||||||||||||||| |||||||||| ||||| ||||||||||||    
T  16929043 cagaaagggggcaaaaagatggggtgcaaaac-gctcaaa-aaaaagagggggtgcaaaatcgcacaattagcaaaagatagggggggaaagtgcaatta 16928946  T
Q  126 agcctatattatatatgtat 145  Q
    |||||| || || |||||||    
T  16928945 agcctaaataatttatgtat 16928926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 41662622 - 41662520
Alignment:
Q  28 agaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 127  Q
    |||||||| |||||  || ||| ||||||| ||||  |||||| |||| |||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  41662622 agaaagggagaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaag 41662523  T
Q  128 cct 130  Q
    |||    
T  41662522 cct 41662520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 130
Target Start/End: Original strand, 43246139 - 43246231
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaat-atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||||||||||||||| ||||||  |||||  | ||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||    
T  43246139 aaaagatggggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcacacaattagcaaaagataggggggaaaagtgcaattaagcct 43246231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 17431389 - 17431286
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| |||| |||| ||||||||||||||| ||||  |||||||||||||||||||||||    
T  17431389 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgaaaaatcgcacaattgacaaactatatgggggaaaagtgcaattaa 17431290  T
Q  127 gcct 130  Q
    ||||    
T  17431289 gcct 17431286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 12281390 - 12281480
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||| ||||| ||||| ||||||  ||||| | |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  12281390 aaaagatagggtggaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcc 12281480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 16929207 - 16929296
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||||||||||||||| | ||||  ||||| | ||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||    
T  16929207 aaaagatggggtgcaaaatcgttcaaa-aaaaagagggggtgcaaaatcgcacaattagcaaaagataggggagaaaagtgcaattaagcc 16929296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 24473445 - 24473343
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||||||| |||  || ||| ||||||| ||||| |||||| |||||||||||||||| |||||||||||||  ||| |||| ||||||||||||||    
T  24473445 cagaaaggggggaaactatagggggcaaaatcgctcatttaaaattatggggtgcaaaatcacacaattggcaaactatagggggaaaaagtgcaattaa 24473346  T
Q  127 gcc 129  Q
    |||    
T  24473345 gcc 24473343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 37752381 - 37752470
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||| |||||||||||||| ||||||  ||||| | |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  37752381 aaaatatggggtgcaaaatcgctcaaa-aaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 37752470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 6199048 - 6199152
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| |||||| |||||||||||||||||||||||  ||| ||  |||||||||||||||    
T  6199048 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactatagggaagaaaagtgcaattaa 6199147  T
Q  127 gccta 131  Q
    |||||    
T  6199148 gccta 6199152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 135
Target Start/End: Original strand, 24473720 - 24473828
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || |||  |||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| ||  |||||||||||||||    
T  24473720 cagaaagggggaaaactataggggacaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggatgaaaagtgcaattaa 24473819  T
Q  127 gcctatatt 135  Q
    |||| ||||    
T  24473820 gcctttatt 24473828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 34498507 - 34498611
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||| || ||| ||| |||  ||   |||||| |||||||||||||||||||||||| |||||  ||| |||||||||||||||||||    
T  34498507 cagaaagggggaaaaatatagggggcataatctcttgtttaaaactatggggtgcaaaatcgcacaatttgcaaactataggggggaaaagtgcaattaa 34498606  T
Q  127 gccta 131  Q
    |||||    
T  34498607 gccta 34498611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 25438857 - 25438794
Alignment:
Q  64 attaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 127  Q
    ||||||| ||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||    
T  25438857 attaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 25438794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 37397097 - 37397199
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||||||||||   || ||| ||||| | ||||  |||||| ||||||| ||||||||||||||||||||||  ||| |||||||||||||||||||    
T  37397097 cagaaagggggaaatctatagggggcaaagtcgctcgtttaaaactatggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 37397196  T
Q  127 gcc 129  Q
    |||    
T  37397197 gcc 37397199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 129
Target Start/End: Original strand, 3463894 - 3463999
Alignment:
Q  25 accagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaat 123  Q
    |||||||| |||| |||||||||||||||||||| ||||||   |||  |  |||||||| ||||||||||| |||||| ||| ||||||||||||||||    
T  3463894 accagaaacggggtaaaaagatggggtgcaaaatcgctcaaaacaaaggagagggtgcaagatcgcacaattagcaaaatataggggggaaaagtgcaat 3463993  T
Q  124 taagcc 129  Q
    ||||||    
T  3463994 taagcc 3463999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 127
Target Start/End: Complemental strand, 15442862 - 15442765
Alignment:
Q  30 aaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 127  Q
    |||| ||||||| ||| ||||||||||| || |  ||||||| ||||||||||||||| |||||||||| ||| ||| ||||||||| ||||||||||    
T  15442862 aaagcgggaaaaggatagggtgcaaaatcgcacgtttaaaaacatggggtgcaaaatcacacaattggcgaaatataggggggaaaaatgcaattaag 15442765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 6198760 - 6198656
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||| ||||||||  || ||| ||||||| ||||  |||||| ||| |||||||||||||||||||||| | |  ||||||| |||||||||||||||    
T  6198760 cagaaatggggaaaactatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggaagaccatatgggagaaaagtgcaattaa 6198661  T
Q  127 gccta 131  Q
    |||||    
T  6198660 gccta 6198656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 130
Target Start/End: Original strand, 18020053 - 18020141
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||  |||||||||  ||| ||||||||||||||||||    
T  18020053 aaaagatggggtgcaaaatcgctcaaa-aaaaagagggggtgcaaaatcgcacaattaacaaaagata--gggtaaaagtgcaattaagcct 18020141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 20861590 - 20861693
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||  ||||||| ||||  |||||| |||||||||||||||||||||||||||| |  ||| |||| |||| |||||||||    
T  20861590 cagaaagggggaaaattataggaggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcagactatagggggaaaaaatgcaattaa 20861689  T
Q  127 gcct 130  Q
    ||||    
T  20861690 gcct 20861693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 34313852 - 34313765
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||| ||||||||||| ||||||  ||||| | |||||||||||||||||||||  |||||||||  |||||||||||||||||||||    
T  34313852 aaaagatagggtgcaaaatcgctcaaa-aaaaagagggggtgcaaaatcgcacaattaacaaaagata--ggggaaaagtgcaattaagcc 34313765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 34498204 - 34498125
Alignment:
Q  47 gggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||| ||||||||||||||    
T  34498204 gggtgcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaa 34498125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 41662197 - 41662106
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    |||||||  |||||||||| ||| ||  ||||| | |||||||||||||||||||||  |||||||||||||| ||| ||||||||||||||    
T  41662197 aaaagatatggtgcaaaatcgcttaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagatatggggaaaatgtgcaattaagcct 41662106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 129
Target Start/End: Complemental strand, 23123400 - 23123338
Alignment:
Q  67 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||| |||||||| ||||||||||||||| ||||||||| | ||||||||||||||||||||    
T  23123400 aaaaagatggggtgtaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaagcc 23123338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 74936 - 75015
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagata 106  Q
    ||||||||||| |||||||||||||||||||| ||| ||  ||||| | ||||||||||||||||||||| ||||||||||    
T  74936 cagaaagggggcaaaaagatggggtgcaaaatcgctaaaa-aaaaagagggggtgcaaaatcgcacaattagcaaaagata 75015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 37752217 - 37752154
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgc 89  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| |||||||||||||||||    
T  37752217 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgc 37752154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 9623580 - 9623502
Alignment:
Q  51 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  |||  | | |||||||||||||||||    
T  9623580 gcaaaattgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagtgagaaaaagtgcaattaagcc 9623502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 15444637 - 15444703
Alignment:
Q  65 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    |||||| |||||||||||||||||||||||||| |||  ||| |||| |||||||||||||| ||||    
T  15444637 ttaaaactatggggtgcaaaatcgcacaattggtaaattatagggggaaaaagtgcaattaaaccta 15444703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 127
Target Start/End: Complemental strand, 74773 - 74688
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 127  Q
    |||||||| |||||||||| ||| ||  ||||| | ||||||||||||||||||||| |||||||||  | ||||||||||||||||||    
T  74773 aaaagatgaggtgcaaaatcgctaaa--aaaaaaaaggggtgcaaaatcgcacaattagcaaaagat-ggagggaaaagtgcaattaag 74688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 33748073 - 33747981
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctat 132  Q
    ||||||| ||||||||||| ||||||  ||||| |  || ||||||||| ||||||| ||||||||||| ||  ||||||||||||||||||||    
T  33748073 aaaagatagggtgcaaaatcgctcaaaaaaaaagagcggatgcaaaatcacacaattagcaaaagatat-ggaaaaaagtgcaattaagcctat 33747981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 9465838 - 9465923
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||| |||||||||||||| ||||||  ||||| | |||||||||||||||||||||  |||||||||  ||| |||| |||||||||    
T  9465838 aaaaaatggggtgcaaaattgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagata--gggaaaaaatgcaattaa 9465923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 2856583 - 2856524
Alignment:
Q  72 tatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    ||||||||||||||||||||||||||||||  ||| || |||||| | ||||||||||||    
T  2856583 tatggggtgcaaaatcgcacaattggcaaactatagggaggaaaattacaattaagccta 2856524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 18020013 - 18019915
Alignment:
Q  29 gaaagggggaaaaagatggggtgcaaaatagctcaattaaaa--atatggggtgcaaaatcgcacaatt-ggcaaaagatatgggggaaaagtgcaatt 124  Q
    |||| |||| ||||||||||||||||||| ||||||  | ||  | | ||||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  18020013 gaaaaggggcaaaagatggggtgcaaaatcgctcaaaaagaagaagagggggtgcaaaatcgcacaattaggaaaaagatagggggcaaaagtgcaatt 18019915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 126
Target Start/End: Original strand, 25439102 - 25439176
Alignment:
Q  51 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||| ||||||||||||||    
T  25439102 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactata-ggggaaaaagtgcaattaa 25439176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 125
Target Start/End: Original strand, 43162539 - 43162588
Alignment:
Q  75 ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  43162539 ggggtgcaaaatcgcacgattgacaaaagata-gggggaaaagtgcaatta 43162588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 22851912 - 22851976
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaatt 66  Q
    |||||||||||||||| ||| |||| |||||||||||||||||| | |||||||||| || |||||    
T  22851912 ctaaaacacatggggg-cctccaaatcagaaagggggaaaaagacgaggtgcaaaatcgcacaatt 22851976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 23123517 - 23123567
Alignment:
Q  75 ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 127  Q
    ||||||||||||||||||||| |||||||||| ||||  ||||||||||||||    
T  23123517 ggggtgcaaaatcgcacaattagcaaaagataagggg--aaagtgcaattaag 23123567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 43162325 - 43162234
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggg--gtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||| ||||||||||| ||||||  ||||| |  ||  ||||||||||||||||||  ||||| ||| ||||||||||||||||||||||    
T  43162325 aaaagatagggtgcaaaatcgctcaaaaaaaaaaagaggaggtgcaaaatcgcacaattaacaaaatata-gggggaaaagtgcaattaagcc 43162234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 7127702 - 7127660
Alignment:
Q  79 tgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaa 122  Q
    ||||||||||||||||| |||||||||| |||||||||||||||    
T  7127702 tgcaaaatcgcacaattagcaaaagata-gggggaaaagtgcaa 7127660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 9465693 - 9465606
Alignment:
Q  40 aaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    |||||| ||||||||||| ||| ||  ||||| | |||||  ||||| ||||||||| ||||||||| || ||||||||||||||||||||    
T  9465693 aaagatagggtgcaaaatcgctaaa--aaaaagacggggtataaaattgcacaattgacaaaagata-ggaggaaaagtgcaattaagcct 9465606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 11007800 - 11007883
Alignment:
Q  47 gggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||||||| ||| ||  ||||| | |||| |||||||| ||||||||| |||||||| |  || |||||||||||||||||    
T  11007800 gggtgcaaaatcgctaaaaaaaaaagaaggggagcaaaatctcacaattggtaaaagataagaagggaaagtgcaattaagcct 11007883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 22851958 - 22852009
Alignment:
Q  77 ggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 128  Q
    |||||||||||||||||||||||||||||| ||  ||||| | |||||||||    
T  22851958 ggtgcaaaatcgcacaattggcaaaagatagggatgaaaaatacaattaagc 22852009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 33727057 - 33727156
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||  |||||||||||||||||| |||||  |||  || |||||||| ||||||    
T  33727057 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgaagtgcaaaatcgcacaattagcaaactataaaggagaaaagtgtaattaa 33727156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 137
Target Start/End: Complemental strand, 3463729 - 3463634
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatattat 137  Q
    |||||||| |||| ||||| ||| ||  |||||| ||||||||||||| ||||||||  ||||||||| ||||||||| || ||||||||||| |||||    
T  3463729 aaaagatgaggtgtaaaatcgctaaaaaaaaaat-tggggtgcaaaattgcacaattaacaaaagata-gggggaaaa-tgtaattaagcctaaattat 3463634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 16169275 - 16169174
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||||| |||||  || ||| | ||||| ||||  |||||| |||| |||||||||| ||||||||||||||  ||| ||  |||||||||||||||    
T  16169275 cagaaagggagaaaactatagggggaaaaattgctcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggatgaaaagtgcaattaa 16169177  T
Q  127 gcc 129  Q
    |||    
T  16169176 gcc 16169174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 22786892 - 22786838
Alignment:
Q  77 ggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    ||||||||||| ||||||| | |||||||| |||| |||||||||||||| ||||    
T  22786892 ggtgcaaaatcacacaattagtaaaagatagggggaaaaagtgcaattaaaccta 22786838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 765999 - 766053
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaatt 95  Q
    ||||||| ||||||||||| ||||||  ||||| | |||||||||||||||||||||    
T  765999 aaaagatagggtgcaaaatcgctcaa--aaaaagagggggtgcaaaatcgcacaatt 766053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 7127789 - 7127877
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaa--atatggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 124  Q
    ||||||||||||||||||| |||||   ||||  | ||||||||||||||| | ||||| || |||||||| |||| ||||||||||||    
T  7127789 aaaagatggggtgcaaaatcgctcataaaaaagaagatggggtgcaaaatcacgcaattagcaaaaagatagggggtaaaagtgcaatt 7127877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 15156062 - 15156111
Alignment:
Q  76 gggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 124  Q
    |||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  15156062 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 15156111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 767720 - 767767
Alignment:
Q  89 cacaattggcaaaagatatgggggaaaagtgcaattaagcctatattat 137  Q
    |||||||  ||||||||| ||||||||||||||||||||||||| ||||    
T  767720 cacaattaacaaaagata-gggggaaaagtgcaattaagcctatgttat 767767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 124
Target Start/End: Complemental strand, 37752290 - 37752242
Alignment:
Q  77 ggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 124  Q
    ||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  37752290 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 37752242  T

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Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 18817537 - 18817671
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    ||||||||||||||||| || |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||||||||||||    
T  18817537 ctaaaacacatggggggtctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaa 18817636  T
Q  101 aagatatgggggaaaagtgcaattaagcctatatt 135  Q
    |||||| ||| |||||||||||||||||| |||||    
T  18817637 aagataggggtgaaaagtgcaattaagccaatatt 18817671  T

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Target: chr5; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 11350935 - 11350807
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    |||||||||||||||||||| |||| || |||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||||||||||||    
T  11350935 ctaaaacacatggggggcctccaaatcaaaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaat-gcacaattggcaa 11350837  T
Q  101 aagatatgggggaaaagtgcaattaagcct 130  Q
    |||||| ||| ||||| |||||||||||||    
T  11350836 aagataggggtgaaaaatgcaattaagcct 11350807  T

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Target: chr5; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 18817080 - 18816950
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    |||||| || |||||||||| |||| |||||||||||||||||||||| |||||||| ||||  ||||||| ||||||||||||||||||||||||||||    
T  18817080 ctaaaatacgtggggggcctccaaatcagaaagggggaaaaagatgggatgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaa 18816981  T
Q  101 aagatatgggggaaaagtgcaattaagccta 131  Q
    |||||| ||| ||||| ||||||||||||||    
T  18816980 aagataggggtgaaaaatgcaattaagccta 18816950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 18433118 - 18433015
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  18433118 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaatta 18433019  T
Q  126 agcc 129  Q
    ||||    
T  18433018 agcc 18433015  T

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Target: chr5; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 11351355 - 11351483
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    |||||||||||||||| ||| |||| || |||||||||||| ||||||||| ||||| ||||  ||||||||||||||||||||||||||||||||||||    
T  11351355 ctaaaacacatggggg-cctccaaatcataaagggggaaaa-gatggggtgtaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaa 11351452  T
Q  101 aagatatgggggaaaagtgcaattaagccta 131  Q
    |||||| | | ||||||||||||||| ||||    
T  11351453 aagataggagtgaaaagtgcaattaaaccta 11351483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 25115860 - 25115755
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | ||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  25115860 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaaaagggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaatta 25115761  T
Q  126 agccta 131  Q
    ||||||    
T  25115760 agccta 25115755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 25174952 - 25174847
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | ||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  25174952 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaaaagggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaatta 25174853  T
Q  126 agccta 131  Q
    ||||||    
T  25174852 agccta 25174847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 26020553 - 26020449
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| ||||||||| |||||||||| ||||||  ||||| ||||||||||||||||||||||| |||||||||| || |||||||||||||||    
T  26020553 cagaaagggggcaaaaagatgcggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagatagggaggaaaagtgcaatta 26020454  T
Q  126 agcct 130  Q
    |||||    
T  26020453 agcct 26020449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 12498669 - 12498565
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  12498669 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 12498570  T
Q  127 gccta 131  Q
    |||||    
T  12498569 gccta 12498565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 131
Target Start/End: Complemental strand, 22429021 - 22428932
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    ||||||||||||||||||| ||||||  ||||| ||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||    
T  22429021 aaaagatggggtgcaaaattgctcaa--aaaaagatggggtgcaaaatcgcacaattagcaaaagata-ggggggaaagtgcaattaagccta 22428932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 12498880 - 12498984
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| |||   |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  12498880 cagaaagggggaaaactatagggggcaaaatcgcttgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 12498979  T
Q  127 gccta 131  Q
    |||||    
T  12498980 gccta 12498984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 25175115 - 25175207
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    ||||||| ||||||||||| ||||||  ||||| | |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  25175115 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccta 25175207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 26571116 - 26571220
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||| ||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  26571116 cagaaaggaggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 26571215  T
Q  127 gccta 131  Q
    |||||    
T  26571216 gccta 26571220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 39 - 130
Target Start/End: Original strand, 18433281 - 18433371
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  18433281 aaaagatggggtgcaaaatcgctcaaa-aaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 18433371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 19514915 - 19515018
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| |||||||| |||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  19514915 cagaaagggggaaaactatagggggcaaaataactcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 19515014  T
Q  127 gcct 130  Q
    ||||    
T  19515015 gcct 19515018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 22729392 - 22729492
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  22729392 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaattata-gggggaaaagtgcaattaa 22729490  T
Q  127 gc 128  Q
    ||    
T  22729491 gc 22729492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 34576968 - 34576870
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| |||||||| |||||||||||||| |||||||||| ||||| ||||||||||||    
T  34576968 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaa-aaaaagatggggtgtaaaatcgcacaattagcaaaagata-ggggggaaagtgcaatta 34576871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 21207328 - 21207229
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||||| |||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  21207328 cagaaagggtgaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 21207229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 3888341 - 3888239
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||| ||||||||||||  ||| |||||||| ||||||||||    
T  3888341 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaactataggggggaaatgtgcaattaa 3888242  T
Q  127 gcc 129  Q
    |||    
T  3888241 gcc 3888239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 34577129 - 34577217
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||||||||||||||| ||||||  ||||| ||||||||||||||| ||||||| |||||||||| |||| |||||||||||||||||    
T  34577129 aaaagatggggtgcaaaatcgctcaaa-aaaaagatggggtgcaaaatcacacaattagcaaaagata-ggggaaaaagtgcaattaagcc 34577217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 26570831 - 26570727
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || |||  |||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||| ||||||    
T  26570831 cagaaagggggaaaactataggggacaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgtaattaa 26570732  T
Q  127 gccta 131  Q
    |||||    
T  26570731 gccta 26570727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 43464144 - 43464247
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| |||| |||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  43464144 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaa 43464242  T
Q  127 gccta 131  Q
    |||||    
T  43464243 gccta 43464247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 3888614 - 3888713
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||| ||||||||||||  ||| | |||||||||||||||||    
T  3888614 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaattataagagggaaaagtgcaattaa 3888713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 19514628 - 19514525
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagata-tgggggaaaagtgcaatta 125  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  |||  ||||| ||||||||||||    
T  19514628 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggggaaagtgcaatta 19514529  T
Q  126 agcc 129  Q
    ||||    
T  19514528 agcc 19514525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 25116023 - 25116117
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatgggg--tgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    ||||||| ||||||||||| ||||||  ||||| | ||||  |||||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  25116023 aaaagatagggtgcaaaatcgctcaaaaaaaaagaaggggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccta 25116117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 5187805 - 5187886
Alignment:
Q  50 tgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    |||||||| ||||||  ||||||| |||||||||||| ||||||||  ||||||||| |||| |||||||||||||||||||    
T  5187805 tgcaaaatcgctcaaaaaaaaatagggggtgcaaaattgcacaattaacaaaagataaggggcaaaagtgcaattaagccta 5187886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 2817244 - 2817152
Alignment:
Q  34 ggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||||| || ||| ||||||| ||||  |||||| |||||| |||||||||||||||||||||||  ||| || ||||||||||||||||    
T  2817244 ggggaaaaatatagggggcaaaatcgctcgtttaaaattatgggatgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaa 2817152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 22429188 - 22429251
Alignment:
Q  67 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    ||||| ||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||    
T  22429188 aaaaagatggggtgcaaaatcgcacaattagcaaaagata-gggggaaaaatgcaattaagccta 22429251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 37610279 - 37610196
Alignment:
Q  51 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatatt 135  Q
    ||||||| ||||  |||||| |||||||||||||||| |||||||||||||  ||| ||||||||||||||||||||||| ||||    
T  37610279 gcaaaatcgctcgtttaaaactatggggtgcaaaatcacacaattggcaaactata-gggggaaaagtgcaattaagcctttatt 37610196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 37780397 - 37780314
Alignment:
Q  51 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatatt 135  Q
    ||||||| ||||  |||||| |||||||||||||||| |||||||||||||  ||| ||||||||||||||||||||||| ||||    
T  37780397 gcaaaatcgctcgtttaaaactatggggtgcaaaatcacacaattggcaaactata-gggggaaaagtgcaattaagcctttatt 37780314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 38 - 131
Target Start/End: Original strand, 16466708 - 16466798
Alignment:
Q  38 aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    |||||||||||||||||||| ||||||  |||| |    | ||||||||||||||||| |||||| ||| ||||||||||||||||||||||||    
T  16466708 aaaaagatggggtgcaaaatcgctcaaaaaaaagtt---gatgcaaaatcgcacaattagcaaaatataggggggaaaagtgcaattaagccta 16466798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 31569970 - 31569904
Alignment:
Q  65 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctat 132  Q
    ||||||| ||| |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||    
T  31569970 ttaaaaacatgaggtgcaaaatcgcacaattgacaaaagata-gggggaaaagtgcaattaaacctat 31569904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 34147462 - 34147565
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| || | |||||||||||||||||||| ||||  ||| |||| ||||||||||||||    
T  34147462 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactacgaggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaa 34147561  T
Q  127 gcct 130  Q
    ||||    
T  34147562 gcct 34147565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 42919406 - 42919304
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||| |||| ||| ||||||||||| ||||  ||||||| ||| |||| |||||||||||||||| |||| ||| |||| ||||| ||||||||    
T  42919406 cagaaaggggaaaaatgatagggtgcaaaatcgctcgtttaaaaacatgtggtgaaaaatcgcacaattggaaaaatata-ggggaaaaagagcaattaa 42919308  T
Q  127 gcct 130  Q
    ||||    
T  42919307 gcct 42919304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 43463857 - 43463759
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||||| |||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  |||  ||||||||||||||||||    
T  43463857 cagaaagggagaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactata-aggggaaaagtgcaattaa 43463759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 9665792 - 9665879
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||||||||||||||| ||||||  |||||||  ||||||||||| |||||||| |||||||||| |||||||||||| |||||||||    
T  9665792 aaaagatggggtgcaaaatcgctcaa-aaaaaatagtgggtgcaaaat-gcacaattagcaaaagata-gggggaaaagtggaattaagcc 9665879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 11316926 - 11317000
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaa 101  Q
    ||||||| |||||||  || ||| ||||||| ||||| ||||||  |||||||||||||||||||||||||||||    
T  11316926 cagaaagagggaaaactatagggggcaaaatcgctcatttaaaacaatggggtgcaaaatcgcacaattggcaaa 11317000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 16726130 - 16726084
Alignment:
Q  77 ggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaat 123  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||    
T  16726130 ggtgcaaaatcgcacaattggcaaaagatagggggcaaaagtgcaat 16726084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 10098931 - 10099007
Alignment:
Q  65 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatattatatatg 142  Q
    |||||| ||||||||||||||||||||||||| ||||  ||| || |||||||||||||||| |||||  ||||||||    
T  10098931 ttaaaactatggggtgcaaaatcgcacaattgacaaactata-ggaggaaaagtgcaattaaacctattatatatatg 10099007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 9665617 - 9665560
Alignment:
Q  67 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||| |||||||||||||| |||||||| ||||||||||  ||||||||||||||||||    
T  9665617 aaaaagatggggtgcaaaattgcacaattagcaaaagata--ggggaaaagtgcaattaa 9665560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 33324838 - 33324894
Alignment:
Q  75 ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    ||||||||||||| |||||||| ||||||||| |||  |||||||||||||||||||    
T  33324838 ggggtgcaaaatcacacaattgacaaaagataggggaaaaaagtgcaattaagccta 33324894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 34147241 - 34147140
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| || ||||||||||||||||||||||  | ||  |||  |||||||||||||||||    
T  34147241 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactacggggtgcaaaatcgcacaattg--ataaactataagggaaaagtgcaattaa 34147144  T
Q  127 gcct 130  Q
    ||||    
T  34147143 gcct 34147140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 25940623 - 25940520
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||||| |||||  || ||| ||||||| ||||  |||||| ||| ||||||||||||||||||||| ||||  ||| |||  |||| |||||||||    
T  25940623 cagaaagggtgaaaactatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattgacaaactataggggaaaaaaatgcaattaa 25940524  T
Q  127 gcct 130  Q
    ||||    
T  25940523 gcct 25940520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 41383167 - 41383221
Alignment:
Q  75 ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||| |||||||||||    
T  41383167 ggggtgcaaaatcgcacaattagcaaaaaata-gggggaaaagttcaattaagcct 41383221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 22729108 - 22729008
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||  ||||||||||||||||||  ||||  ||| |||||||||||||||||||    
T  22729108 cagaaagggggaaaactataggg-gcaaaatcgctcgtttaaaactatgaagtgcaaaatcgcacaatttacaaactata-gggggaaaagtgcaattaa 22729011  T
Q  127 gcc 129  Q
    |||    
T  22729010 gcc 22729008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 23011170 - 23011079
Alignment:
Q  38 aaaaagatggggtgcaaaatagctcaattaaaaatatgg--ggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||| ||||||||||||||  |||||  ||||| ||||  ||||||||||||||||||| ||||||||||  |||||||| ||||||||||||    
T  23011170 aaaaaaatggggtgcaaaatctctcaaaaaaaaa-atggtgggtgcaaaatcgcacaattagcaaaagata-aggggaaaaatgcaattaagcc 23011079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 37780718 - 37780796
Alignment:
Q  51 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||| ||||  ||||||  ||| ||||||||||||||||||| |||||  ||| ||||||||||| ||||||||||    
T  37780718 gcaaaatcgctcgtttaaaacaatgaggtgcaaaatcgcacaattagcaaactataggggggaaaagtacaattaagcc 37780796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 134
Target Start/End: Complemental strand, 10098597 - 10098514
Alignment:
Q  51 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatat 134  Q
    ||||||| ||||  |||||| ||| || |||||||||||||||||| ||||  ||| | || ||||||||||||||||| ||||    
T  10098597 gcaaaatcgctcgtttaaaactataggatgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaagccaatat 10098514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 11316812 - 11316717
Alignment:
Q  31 aagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||  || ||| ||||||| ||||  |||||| ||| || |||||||| | ||||||||||||  ||| | |||||||||||||||||    
T  11316812 aagggggaaaactatagggggcaaaattgctcgtttaaaattataggatgcaaaattgtacaattggcaaactataggagggaaaagtgcaattaa 11316717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 12441320 - 12441364
Alignment:
Q  83 aaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||||    
T  12441320 aaatcgcacaattagcaaaagata--ggggaaaagtgcaattaagcc 12441364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 128
Target Start/End: Original strand, 25940972 - 25941067
Alignment:
Q  33 gggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 128  Q
    |||||||||  || ||| ||||||| ||||  |||||| |||||| |||||||||||| ||||  ||||  ||| | |||||||||||||||||||    
T  25940972 gggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcataattaacaaactataggagggaaaagtgcaattaagc 25941067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 41072167 - 41072269
Alignment:
Q  28 agaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 127  Q
    ||||||||||||||  || ||| ||||||| ||||  |||||| ||| ||||||||||||| ||||||| ||||  ||| || ||||||||| ||||||     
T  41072167 agaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgtacaattgacaaactata-ggaggaaaagtgtaattaaa 41072265  T
Q  128 ccta 131  Q
    ||||    
T  41072266 ccta 41072269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 41382945 - 41382891
Alignment:
Q  76 gggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    ||||||||||||||||||||  ||||||||| ||||||||| ||||||||| ||||    
T  41382945 gggtgcaaaatcgcacaattaacaaaagataggggggaaaa-tgcaattaaaccta 41382891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 9869639 - 9869563
Alignment:
Q  46 ggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||| ||||||  ||||| |  |||||||||||||||||||| |||||  ||| || ||||||||||||||||    
T  9869639 ggggtgcaaaatcgctcaa--aaaaaaagtgggtgcaaaatcgcacaattagcaaa--atagggaggaaaagtgcaattaa 9869563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 9869688 - 9869790
Alignment:
Q  29 gaaagggggaaaaagatggggtgcaaaatagctcaattaaaaat----atggggtgcaaaatcgcacaattgg-caaaagatatgggggaaaagtgcaat 123  Q
    ||||||||| ||| ||||||||||||||| ||| ||  |||||     | |||||||||||||||||||||||  |||||| | |||| |||||||||||    
T  9869688 gaaagggggcaaatgatggggtgcaaaatcgctaaaaaaaaaaagaagagggggtgcaaaatcgcacaattggtaaaaagacagggggcaaaagtgcaat 9869787  T
Q  124 taa 126  Q
    |||    
T  9869788 taa 9869790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 25115934 - 25115885
Alignment:
Q  76 gggtgcaaaatcgcacaattggcaaaa-gatatgggggaaaagtgcaatt 124  Q
    |||||||||||||||||||| |||||| |||| |||| ||||||||||||    
T  25115934 gggtgcaaaatcgcacaattagcaaaatgataaggggcaaaagtgcaatt 25115885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 25175026 - 25174977
Alignment:
Q  76 gggtgcaaaatcgcacaattggcaaaa-gatatgggggaaaagtgcaatt 124  Q
    |||||||||||||||||||| |||||| |||| |||| ||||||||||||    
T  25175026 gggtgcaaaatcgcacaattagcaaaatgataaggggcaaaagtgcaatt 25174977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 34577040 - 34576991
Alignment:
Q  78 gtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||||| || |||||||| |||| ||||||||||||||    
T  34577040 gtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattaa 34576991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 2817551 - 2817626
Alignment:
Q  51 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 127  Q
    ||||||| ||||  |||||| ||| || || |||||||||||||| |||||  ||| ||||||||||||||||||||    
T  2817551 gcaaaatcgctcgtttaaaactattggatgtaaaatcgcacaattcgcaaactata-gggggaaaagtgcaattaag 2817626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 124
Target Start/End: Complemental strand, 18433191 - 18433143
Alignment:
Q  77 ggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 124  Q
    ||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  18433191 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 18433143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 23011261 - 23011309
Alignment:
Q  79 tgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||||||| |||||||| |||| |||| |||||||||    
T  23011261 tgcaaaatcgcacaattggctaaaagatagggggcaaaattgcaattaa 23011309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 6721 - 6849
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||||||||||||    
T  6721 ctaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaa 6820  T
Q  101 aagatatgggggaaaagtgcaattaagcc 129  Q
    |||||| ||| ||||| ||||||||||||    
T  6821 aagataggggtgaaaaatgcaattaagcc 6849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 6279 - 6152
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    |||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||| ||||    
T  6279 ctaaaacacatggggg-cctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcatttaaaaatatggggtgtaaaatcgcacaattagcaa 6181  T
Q  101 aagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||  || ||||||||||||||||||    
T  6180 aagatagaggtgaaaagtgcaattaagcc 6152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 4e-44; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 49284529 - 49284403
Alignment:
Q  9 catggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatg 108  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| |||||||||||||||||||||||||||||||||| |    
T  49284529 catggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagatagg 49284430  T
Q  109 ggggaaaagtgcaattaagcctatatt 135  Q
    || ||||||||||||||||||| ||||    
T  49284429 ggtgaaaagtgcaattaagcctttatt 49284403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 9 - 129
Target Start/End: Complemental strand, 6002357 - 6002237
Alignment:
Q  9 catggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatg 108  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||||| |||||||| ||||||||| |    
T  6002357 catggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcacacaattgacaaaagatagg 6002258  T
Q  109 ggggaaaagtgcaattaagcc 129  Q
    || ||||||||||||||||||    
T  6002257 ggtgaaaagtgcaattaagcc 6002237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 49284981 - 49285088
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||   ||||||| ||||||||||||||||||||||||||||    
T  49284981 ctaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgcttgtttaaaaacatggggtgcaaaatcgcacaattggcaa 49285080  T
Q  101 aagatatg 108  Q
    ||||||||    
T  49285081 aagatatg 49285088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 47955409 - 47955305
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  47955409 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaatta 47955310  T
Q  126 agcct 130  Q
    |||||    
T  47955309 agcct 47955305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 6002819 - 6002946
Alignment:
Q  1 ctaaaacacatgggggg-ccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggca 99  Q
    ||||||||||||||||| ||| |||| |||||||||||||||||||| |||||||||| ||||  ||||||| ||||||||||||||||||||||||  |    
T  6002819 ctaaaacacatgggggggcctccaaatcagaaagggggaaaaagatgaggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattgcga 6002918  T
Q  100 aaagatatgggggaaaagtgcaattaag 127  Q
    ||||||| ||  ||||||||||||||||    
T  6002919 aaagatagggatgaaaagtgcaattaag 6002946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 27 - 141
Target Start/End: Complemental strand, 28633822 - 28633708
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||| ||||||||||||  ||| |||||||||||||||||||    
T  28633822 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaactataagggggaaaagtgcaattaa 28633723  T
Q  127 gcctatattatatat 141  Q
    |||||||||||||||    
T  28633722 gcctatattatatat 28633708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 31848003 - 31847885
Alignment:
Q  21 tcaaaccagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtg 119  Q
    ||||||||||||||||| |||||||| ||||||||||| ||||||  ||||||||||| |||||||| |||||||| |||||||||| ||||| ||||||    
T  31848003 tcaaaccagaaagggggcaaaaagatcgggtgcaaaatcgctcaaa-aaaaatatgggatgcaaaattgcacaattagcaaaagataagggggtaaagtg 31847905  T
Q  120 caattaagcctatattatat 139  Q
    ||||||| ||| ||||||||    
T  31847904 caattaaacctttattatat 31847885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 39691952 - 39692055
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||||||||||||||| |||||||||||  | |  ||||||| |||||||||||||||||||||||| ||||| ||| |||||||||||||||||||    
T  39691952 cagaaagggggaaaaagatagggtgcaaaatcacacgtttaaaaacatggggtgcaaaatcgcacaattgacaaaatataggggggaaaagtgcaattaa 39692051  T
Q  127 gcct 130  Q
    ||||    
T  39692052 gcct 39692055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 9347228 - 9347126
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  9347228 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 9347129  T
Q  127 gcc 129  Q
    |||    
T  9347128 gcc 9347126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 48105068 - 48105170
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  48105068 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaa 48105167  T
Q  127 gcc 129  Q
    |||    
T  48105168 gcc 48105170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 22149653 - 22149750
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||| |||||||||||||||||||| ||| ||  ||||| | | ||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  22149653 cagaaaggggcaaaaagatggggtgcaaaatcgctaaa--aaaaaaaggaggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 22149750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 32162995 - 32163099
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  ||  || ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  32162995 cagaaagggggaaaactataaggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 32163094  T
Q  127 gccta 131  Q
    |||||    
T  32163095 gccta 32163099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 8108985 - 8109048
Alignment:
Q  67 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8108985 aaaaagatggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 8109048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 27172217 - 27172116
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  27172217 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaa 27172119  T
Q  127 gcc 129  Q
    |||    
T  27172118 gcc 27172116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 50615573 - 50615674
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||| |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  50615573 cagaaagggggaaaactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaa 50615671  T
Q  127 gcc 129  Q
    |||    
T  50615672 gcc 50615674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 50623401 - 50623502
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||| |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  50623401 cagaaagggggaaaactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaa 50623499  T
Q  127 gcc 129  Q
    |||    
T  50623500 gcc 50623502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 17518555 - 17518653
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| ||||||||||| |||||||| ||||||  ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17518555 cagaaagggggcaaaaagatggg-tgcaaaattgctcaaa-aaaaagagggggtgcaaaatcgcacaattggcaaaagata-gggggaaaagtgcaatta 17518651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 135
Target Start/End: Original strand, 9347503 - 9347610
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||| ||||||||||||||  ||| ||||| |||||||||||||    
T  9347503 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactata-ggggggaaagtgcaattaa 9347601  T
Q  127 gcctatatt 135  Q
    |||||||||    
T  9347602 gcctatatt 9347610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 26815071 - 26815175
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| |||||||||||||||||||||||||  |||  ||| |||||||||||||||||||    
T  26815071 cagaaagggggaaaattatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaa 26815170  T
Q  127 gccta 131  Q
    |||||    
T  26815171 gccta 26815175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 44911127 - 44911023
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  || |||  |||||||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  44911127 cagaaagggggaaaactatagggggcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaaatatagggggggaaagtgcaattaa 44911028  T
Q  127 gccta 131  Q
    |||||    
T  44911027 gccta 44911023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 47955572 - 47955664
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    ||||||| ||||||||||| ||||||  ||||| | |||||||||||||||||||||   |||||||| ||||||||||||||||||||||||    
T  47955572 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaagccta 47955664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 50526424 - 50526524
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||| ||||||||||||||    
T  50526424 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaa 50526523  T
Q  127 g 127  Q
    |    
T  50526524 g 50526524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 20480269 - 20480167
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  20480269 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaa 20480171  T
Q  127 gcct 130  Q
    ||||    
T  20480170 gcct 20480167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 138
Target Start/End: Original strand, 28634109 - 28634220
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| | ||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  28634109 cagaaagggggaaaactatagggggcaaaatcgatcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 28634208  T
Q  127 gcctatattata 138  Q
     |||||| ||||    
T  28634209 acctataatata 28634220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 41083011 - 41082909
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||||||||||||||||||| ||| ||  ||||| | ||| |||||||||||||||||||||||||||| |||| |||||| ||||||    
T  41083011 cagaaagggggcaaaaagatggggtgcaaaatcgctaaaa-aaaaagaggggatgcaaaatcgcacaattggcaaaagatagggggaaaaagtacaatta 41082913  T
Q  126 agcc 129  Q
    ||||    
T  41082912 agcc 41082909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 46823945 - 46823846
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||| ||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  46823945 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggagtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 46823846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 48104780 - 48104681
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  48104780 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgccaaactataggggggaaaagtgcaattaa 48104681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 50430033 - 50430132
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||||| |||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  50430033 cagaaagggagaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 50430132  T

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Target: chr1; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 13918548 - 13918446
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| | || ||||||||||||||    
T  13918548 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggaggaaaaagtgcaattaa 13918449  T
Q  127 gcc 129  Q
    |||    
T  13918448 gcc 13918446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 26814796 - 26814694
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| || ||||||||||||||||    
T  26814796 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaa 26814697  T
Q  127 gcc 129  Q
    |||    
T  26814696 gcc 26814694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 67 - 129
Target Start/End: Complemental strand, 48190833 - 48190771
Alignment:
Q  67 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  48190833 aaaaagatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 48190771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 999477 - 999581
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| |||||| ||||||||||||||||||||||   ||| |||||||||||||||||||    
T  999477 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggttgcaaaatcgcacaattggcaatctata-gggggaaaagtgcaattaa 999575  T
Q  127 gcctat 132  Q
    ||||||    
T  999576 gcctat 999581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 48191348 - 48191412
Alignment:
Q  68 aaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctat 132  Q
    |||| ||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||    
T  48191348 aaaagatggggtgcaaaatcgcaccattggcaaaagataggggtgaaaagtgcaattaagcctat 48191412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 133
Target Start/End: Original strand, 31848158 - 31848250
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctata 133  Q
    ||||||||||||||||||| |||| |  ||||| | |||||||||||||| ||||||  ||||||||| ||| ||||||||||||||||||||||    
T  31848158 aaaagatggggtgcaaaatcgctcga--aaaaagagggggtgcaaaatcgtacaattaacaaaagataggggagaaaagtgcaattaagcctata 31848250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 42611287 - 42611188
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||  ||||||| ||||  |||||| |||| |||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  42611287 cagaaagggggaaaactataggaggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaa 42611188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 13589628 - 13589713
Alignment:
Q  45 tggggtgcaaaatagctcaattaaaaat-atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||||||||| ||||||  |||||  | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  13589628 tggggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagata-gggggaaaagtgcaattaagcct 13589713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 19008696 - 19008806
Alignment:
Q  21 tcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgc 120  Q
    ||||| |||||||||||||||  || ||| ||||||| || |  || ||| |||||||||||||||||||||||||  |||  ||| |||||||||||||    
T  19008696 tcaaatcagaaagggggaaaattatagggggcaaaattgcacgttttaaactatggggtgcaaaatcgcacaattgcgaaactataggggggaaaagtgc 19008795  T
Q  121 aattaagccta 131  Q
    |||||||||||    
T  19008796 aattaagccta 19008806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 1176932 - 1176839
Alignment:
Q  34 ggggaaaaagatggggtgcaaaatagct-caattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||| ||||||||||||||||||| ||| |||  ||||| | |||||||||||| ||||||||| ||||||||| |||| ||||||||||||||    
T  1176932 ggggcaaaagatggggtgcaaaatcgctacaaaaaaaaagagggggtgcaaaattgcacaattgacaaaagatagggggtaaaagtgcaattaa 1176839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 8108810 - 8108718
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctat 132  Q
    ||||||| ||||||||||| ||||||  ||||| | |||||||||||||||||||||  ||||||||| || |||||||||||||||| |||||    
T  8108810 aaaagatagggtgcaaaatcgctcaaaaaaaaa-agggggtgcaaaatcgcacaattaacaaaagatagggaggaaaagtgcaattaaacctat 8108718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 22149490 - 22149396
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatatta 136  Q
    ||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||  |||| |||| ||||||||||||||||||||||| |||||    
T  22149490 aaaagatggggtgcaaaatcgctcaaa-aaaaagagggggtgcaaaatcgcacaattaccaaa-gata-gggggaaaagtgcaattaagcctttatta 22149396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 135
Target Start/End: Original strand, 6703870 - 6703954
Alignment:
Q  51 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatatt 135  Q
    ||||||| ||||  |||||| ||||||||||||||| ||||||||||||||  ||| ||| |||||||||||||||||| |||||    
T  6703870 gcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggggagaaaagtgcaattaagccaatatt 6703954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 131
Target Start/End: Complemental strand, 17518392 - 17518301
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    ||||||| ||||||||||| ||||||  ||||| | |||||||||||||||||||||  |||||||||  ||||||| |||||||||||||||    
T  17518392 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagata-aggggaaaggtgcaattaagccta 17518301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 130
Target Start/End: Original strand, 46824233 - 46824333
Alignment:
Q  30 aaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||| ||||||||||||||  ||| | || |||||||||||||||||    
T  46824233 aaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggaggaaaaagtgcaattaagcc 46824332  T
Q  130 t 130  Q
    |    
T  46824333 t 46824333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 20371304 - 20371406
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatgggg-tgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||  || ||| ||||||| ||||  |||||| ||||||| |||||||||||||||||||||||  ||| ||||||||||||||||||    
T  20371304 cagaaagggggtaaactatagggggcaaaattgctcgtttaaaactatgggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaatta 20371402  T
Q  126 agcc 129  Q
    ||||    
T  20371403 agcc 20371406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 27172494 - 27172596
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  ||||||  ||||| |||||||||||||||||||||||  | | |||||||||||||||||||    
T  27172494 cagaaagggggaaaactataggg-gcaaaatcgctcgtttaaaacaatgggatgcaaaatcgcacaattggcaaagtacaggggggaaaagtgcaattaa 27172592  T
Q  127 gcct 130  Q
    ||||    
T  27172593 gcct 27172596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 21687127 - 21687025
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||| ||||||  || ||| ||||||| ||||  |||||| |||||||||||||||  |||||||| ||||  ||| |||||||||||||||||||    
T  21687127 cagaaaggaggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaattacacaattgacaaactataggggggaaaagtgcaattaa 21687028  T
Q  127 gcc 129  Q
    |||    
T  21687027 gcc 21687025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 49317853 - 49317752
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| | ||||| ||||  |||||| |||||| |||||||| ||||||||||||||  ||| |||||||||||||||||||    
T  49317853 cagaaagggggaaaactatagggggtaaaatcgctcgtttaaaactatgggatgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaa 49317755  T
Q  127 gcc 129  Q
    |||    
T  49317754 gcc 49317752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 49318118 - 49318219
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  || ||| |||||| |||||||||||||||||||||||  ||| ||||| |||||||||||||    
T  49318118 cagaaagggggaaaactatagggggcaaaatcgctcgttttaaactatgggatgcaaaatcgcacaattggcaaactata-ggggggaaagtgcaattaa 49318216  T
Q  127 gcc 129  Q
    |||    
T  49318217 gcc 49318219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 4692423 - 4692488
Alignment:
Q  65 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    |||||| ||||||||||||||| ||||||||||||||  ||| |||| ||||||||||||||||||    
T  4692423 ttaaaactatggggtgcaaaattgcacaattggcaaactatagggggaaaaagtgcaattaagcct 4692488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 6703562 - 6703458
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||| ||||||||  || ||| ||||||| ||||  |||||| |||| ||||||||||||||||||||| |||  ||| | || ||||||||||||||    
T  6703562 cagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggtaaactataggaggaaaaagtgcaattaa 6703463  T
Q  127 gccta 131  Q
    |||||    
T  6703462 gccta 6703458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 20480602 - 20480665
Alignment:
Q  65 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||||| ||| ||||||||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  20480602 ttaaaactatagggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 20480665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 48191311 - 48191366
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaat 57  Q
    |||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  48191311 ctaaaacacatggggggcctccaaatcagaaaggggg-aaaagatggggtgcaaaat 48191366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 13918857 - 13918920
Alignment:
Q  65 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 128  Q
    |||||| |||| |||||||||||||||||||||||||  ||| || ||||||||||||||||||    
T  13918857 ttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaagc 13918920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 24671338 - 24671283
Alignment:
Q  47 gggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaa 102  Q
    ||||||||||| ||||||||||||  |||| |||||||||||||||||||||||||    
T  24671338 gggtgcaaaatcgctcaattaaaaggatggagtgcaaaatcgcacaattggcaaaa 24671283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 134
Target Start/End: Original strand, 41083211 - 41083269
Alignment:
Q  75 ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatat 134  Q
    ||||||||||||||||||| |  ||||||||| |||||||||||||||||||||||||||    
T  41083211 ggggtgcaaaatcgcacaactaacaaaagata-gggggaaaagtgcaattaagcctatat 41083269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 48190862 - 48190805
Alignment:
Q  9 catggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaatt 66  Q
    |||||||||||| ||||  |||||||||||||||||||||||||||||| || |||||    
T  48190862 catggggggcctccaaattagaaagggggaaaaagatggggtgcaaaatcgcacaatt 48190805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 999189 - 999115
Alignment:
Q  51 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||| ||||  |||||| |||||| |||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  999189 gcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaa 999115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 39690847 - 39690792
Alignment:
Q  76 gggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    ||||||||||||||||||||||| ||| ||| |||| |||||||||| ||||||||    
T  39690847 gggtgcaaaatcgcacaattggccaaatatagggggaaaaagtgcaactaagccta 39690792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 42611566 - 42611665
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||| ||||  || ||| ||||||| |||   |||||| |||| |||||||||||||||||||| ||||  ||| ||| |||||||||||||||    
T  42611566 cagaaaggggaaaaactatagggggcaaaatcgcttgtttaaaactatgaggtgcaaaatcgcacaattgacaaactataggggagaaaagtgcaattaa 42611665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 130
Target Start/End: Complemental strand, 50429734 - 50429655
Alignment:
Q  51 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||| ||||  |||||| |||| ||||||||||||||||||| |||||  |||  |||||||||| |||||||||||    
T  50429734 gcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattagcaaattataaaggggaaaagtacaattaagcct 50429655  T

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Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 50615289 - 50615239
Alignment:
Q  80 gcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||||||||||||| ||||  ||| |||||||||||||||||||||||    
T  50615289 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 50615239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 50623117 - 50623067
Alignment:
Q  80 gcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||||||||||||| ||||  ||| |||||||||||||||||||||||    
T  50623117 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 50623067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 1177018 - 1177079
Alignment:
Q  75 ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatatta 136  Q
    |||||||||||| |||||||| || ||||||| || |||||||||||||||| |||| ||||    
T  1177018 ggggtgcaaaattgcacaattagcgaaagatagggaggaaaagtgcaattaaacctagatta 1177079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 1176805 - 1176717
Alignment:
Q  38 aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||||||| ||||||||||| ||| ||  |||||   ||| ||||||||||||||||| |||||| ||| ||||| ||||||||||||||||    
T  1176805 aaaaagatagggtgcaaaatcgctaaa--aaaaaagagggatgcaaaatcgcacaattagcaaaatata-ggggggaaagtgcaattaagcc 1176717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 130
Target Start/End: Complemental strand, 20371116 - 20371039
Alignment:
Q  51 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||| ||||  |||||| ||||||||||||||| ||||||||| ||||   ||| |||| |||||||||||||||||    
T  20371116 gcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattgacaaa--ctatagggggaaagtgcaattaagcct 20371039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 21687457 - 21687520
Alignment:
Q  65 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||||| |||| ||| |||||||||||||||||||||  ||| ||||||||||||| ||||||||    
T  21687457 ttaaaactatgaggtacaaaatcgcacaattggcaaattata-gggggaaaagtgctattaagcc 21687520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 126
Target Start/End: Complemental strand, 31848119 - 31848019
Alignment:
Q  28 agaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatgggg-tgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatta 125  Q
    ||||| |||| |||| |||||||||||||| ||||||  ||||  |  ||| |||||||||||||||||||| ||||||||  ||| |||||||||||||    
T  31848119 agaaatggggcaaaacatggggtgcaaaatcgctcaaaaaaaagaagagggatgcaaaatcgcacaattggcaaaaagatagagggcaaaagtgcaatta 31848020  T
Q  126 a 126  Q
    |    
T  31848019 a 31848019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 33085771 - 33085670
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||| |||||| |||| |||||||||| | ||  ||||| ||  |||||||||||||  ||||||| ||||| ||| || |||||||| |||||||    
T  33085771 cagaaaggaggaaaaggatgaggtgcaaaatcgttcgtttaaacat--ggggtgcaaaatcaaacaattgacaaaatatagggtggaaaagtacaattaa 33085674  T
Q  127 gcct 130  Q
    ||||    
T  33085673 gcct 33085670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 44911389 - 44911493
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||| ||||||  || ||| ||||||| ||||  || |||  || ||||||||||||||||||||||||||  ||| |||| |||| |||||||||    
T  44911389 cagaaaggaggaaaactatagggggcaaaatcgctcgttttaaacaatagggtgcaaaatcgcacaattggcaaactatagggggaaaaaatgcaattaa 44911488  T
Q  127 gccta 131  Q
     ||||    
T  44911489 accta 44911493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 19007796 - 19007734
Alignment:
Q  67 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    |||| ||| ||| ||||||||||||||||||||||  ||| ||||| |||||||||||||||||    
T  19007796 aaaactatagggggcaaaatcgcacaattggcaaactata-ggggggaaagtgcaattaagcct 19007734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 128
Target Start/End: Complemental strand, 46056991 - 46056904
Alignment:
Q  34 ggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 128  Q
    |||| ||||||| ||||||||||| ||||||  |||||     |||||||||||||| |||| ||||||||||  |||| |||||||||||||||    
T  46056991 ggggcaaaagatagggtgcaaaattgctcaaaaaaaaa-----ggtgcaaaatcgcaaaattagcaaaagata--gggggaaagtgcaattaagc 46056904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 47498493 - 47498547
Alignment:
Q  73 atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 128  Q
    ||||||||||||| |||||||||| ||||  ||| |||||||||||||||||||||    
T  47498493 atggggtgcaaaaccgcacaattgacaaactata-gggggaaaagtgcaattaagc 47498547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 48313792 - 48313847
Alignment:
Q  75 ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    |||||||||||| |||||||| ||||||||||  ||| |||||| |||||||||||    
T  48313792 ggggtgcaaaattgcacaattagcaaaagataatgggaaaaagtacaattaagcct 48313847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 22149580 - 22149630
Alignment:
Q  77 ggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||||||||||||||| || |||||||| |||| ||||||||||||||    
T  22149580 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattaa 22149630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 8108899 - 8108948
Alignment:
Q  76 gggtgcaaaatcgcacaattggcaaaa-gatatgggggaaaagtgcaatt 124  Q
    ||||| |||||||||||||| |||||| ||||||||| ||||||||||||    
T  8108899 gggtgtaaaatcgcacaattagcaaaaagatatggggcaaaagtgcaatt 8108948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 17518481 - 17518530
Alignment:
Q  76 gggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 124  Q
    |||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  17518481 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 17518530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 47498363 - 47498301
Alignment:
Q  65 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||||| |||||| |||||||| ||||||||||||||   ||| |||| ||||||||||||||||    
T  47498363 ttaaaactatgggatgcaaaattgcacaattggcaaa--ctatagggggaaagtgcaattaagcc 47498301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 50949569 - 50949622
Alignment:
Q  79 tgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctat 132  Q
    |||||||||||||||||| ||||  ||| ||||| |||||||||||| ||||||    
T  50949569 tgcaaaatcgcacaattgacaaactatagggggggaaagtgcaattatgcctat 50949622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 32162793 - 32162757
Alignment:
Q  65 ttaaaaatatggggtgcaaaatcgcacaattggcaaa 101  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  32162793 ttaaaactatggggtgcaaaattgcacaattggcaaa 32162757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 49318433 - 49318496
Alignment:
Q  65 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||||| |||||| ||||||||||||||||||  |||  ||| ||||||||| ||||||||||||    
T  49318433 ttaaaactatgggatgcaaaatcgcacaattgataaactata-gggggaaaaatgcaattaagcc 49318496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 4e-32; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 1928360 - 1928489
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    |||||||| ||||||| ||||||||||||||| |||||||| ||| ||||||||||   |||  ||||||||||||||||||||||||||||||||||||    
T  1928360 ctaaaacatatgggggcccttcaaaccagaaaaggggaaaaggatagggtgcaaaaccactcgtttaaaaatatggggtgcaaaatcgcacaattggcaa 1928459  T
Q  101 aagatatgggggaaaagtgcaattaagccta 131  Q
    |||||| || |||||| ||||||||| ||||    
T  1928460 aagatagggaggaaaa-tgcaattaaaccta 1928489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 20968971 - 20969073
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20968971 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaaaa-ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaatta 20969069  T
Q  126 agcc 129  Q
    ||||    
T  20969070 agcc 20969073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 47871070 - 47871176
Alignment:
Q  24 aaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatat-ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaa 122  Q
    ||||||||| |||||||||||||||||||||||| ||||||  |||||  | ||||||||||||||||||||| |||||||||| |||||||||||||||    
T  47871070 aaccagaaaaggggaaaaagatggggtgcaaaatcgctcaaaaaaaaaagtgggggtgcaaaatcgcacaattagcaaaagata-gggggaaaagtgcaa 47871168  T
Q  123 ttaagcct 130  Q
    ||||||||    
T  47871169 ttaagcct 47871176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 48159999 - 48159894
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  48159999 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 48159900  T
Q  127 gcctat 132  Q
    ||||||    
T  48159899 gcctat 48159894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 13 - 129
Target Start/End: Complemental strand, 8314129 - 8314013
Alignment:
Q  13 gggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatggggg 112  Q
    ||||||| | ||| ||||||||||||||| ||| ||||||||||| || |  ||||||| || ||||||||||||||||||||| ||||| ||| ||| |    
T  8314129 gggggccataaaatcagaaagggggaaaatgatagggtgcaaaatcgcacgtttaaaaacattgggtgcaaaatcgcacaattgacaaaatataggggag 8314030  T
Q  113 aaaagtgcaattaagcc 129  Q
    |||||||||||||||||    
T  8314029 aaaagtgcaattaagcc 8314013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 10293711 - 10293608
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||| ||||||||| |||  |||| ||||||||    
T  10293711 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattgacaaaagataggggaaaaaaatgcaatta 10293612  T
Q  126 agcc 129  Q
    ||||    
T  10293611 agcc 10293608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 18875155 - 18875245
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||||||||||||||| ||||||  ||||| | |||||||||||||| |||||| |||||||||| |||| |||||||||||||||||    
T  18875155 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgtacaattagcaaaagatagggggcaaaagtgcaattaagcc 18875245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 10348752 - 10348853
Alignment:
Q  28 agaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 127  Q
    ||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||||| || |||||||||||||||    
T  10348752 agaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatatgaggaaaaagtgcaattaag 10348851  T
Q  128 cc 129  Q
    ||    
T  10348852 cc 10348853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 20968808 - 20968717
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||| ||||||||||| ||||||  ||||| | |||||||||||||||||||||  ||||||||| |||||||| ||||||||||||||    
T  20968808 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaggtgcaattaagcct 20968717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 27238852 - 27238951
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  |||  ||||||||||||||||||    
T  27238852 cagaaagggggaaaactatagggagcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaa 27238951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 40848622 - 40848520
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||| ||||||||||||||||||||  ||| |||||||||||||||||||    
T  40848622 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgtaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaa 40848524  T
Q  127 gcct 130  Q
    ||||    
T  40848523 gcct 40848520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 53687990 - 53687887
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| | ||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  53687990 cagaaagggggaaaactatagggggtaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 53687891  T
Q  127 gcct 130  Q
    ||||    
T  53687890 gcct 53687887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 10293873 - 10293963
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||| ||||||||||| ||||||   |||| | |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  10293873 aaaagatagggtgcaaaatcgctcaaaacaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 10293963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 42673248 - 42673349
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  42673248 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaa 42673346  T
Q  127 gcc 129  Q
    |||    
T  42673347 gcc 42673349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 48160285 - 48160387
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||| ||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| ||||| |||||||||||||    
T  48160285 cagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggggaaagtgcaattaa 48160384  T
Q  127 gcc 129  Q
    |||    
T  48160385 gcc 48160387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 24485413 - 24485513
Alignment:
Q  28 agaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 127  Q
    |||||||||||| |  || ||| ||||||| ||||| |||||| ||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||    
T  24485413 agaaagggggaatactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattggcaaactata-gggagaaaagtgcaattaag 24485511  T
Q  128 cc 129  Q
    ||    
T  24485512 cc 24485513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 40848913 - 40849018
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||||| |||||  || ||| ||||||| |||   |||||| ||||||||||||||||||||||||||||||  |||  ||||||||||||||||||    
T  40848913 cagaaagggtgaaaactatagggggcaaaatcgcttgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaa 40849012  T
Q  127 gcctat 132  Q
    ||||||    
T  40849013 gcctat 40849018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 27238567 - 27238463
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||| ||||||||||||||||||||||||||  ||| | ||||||||| |||||||    
T  27238567 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaactataggagggaaaagtacaattaa 27238468  T
Q  127 gccta 131  Q
    |||||    
T  27238467 gccta 27238463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 28702390 - 28702278
Alignment:
Q  14 ggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatggggga 113  Q
    |||||||||||| ||||||||||  ||| ||| | |||||||||  ||||||||||||||||| ||||||||||||| ||||| ||||||||| | || |    
T  28702390 ggggccttcaaatcagaaagggg--aaaggattgtgtgcaaaatcactcaattaaaaatatggagtgcaaaatcgcataattgacaaaagata-gaggaa 28702294  T
Q  114 aaagtgcaattaagcc 129  Q
    |||||| |||||||||    
T  28702293 aaagtgaaattaagcc 28702278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 129
Target Start/End: Complemental strand, 42673093 - 42672978
Alignment:
Q  13 gggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatggggg 112  Q
    ||||||| | ||| || ||||||||||||  || ||| ||||||| | ||  |||||| ||||||||||||||||||||||||||||||  ||| |||||    
T  42673093 gggggccataaaatcataaagggggaaaactatagggggcaaaatcgatcgtttaaaactatggggtgcaaaatcgcacaattggcaaactata-ggggg 42672995  T
Q  113 aaaagtgcaattaagcc 129  Q
    |||||||||||||||||    
T  42672994 aaaagtgcaattaagcc 42672978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 9026835 - 9026733
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||||||||||||||||||||||||||| ||||||  ||||  | |||||||||||| ||||||||  ||||||||| || |||||| |||||||||    
T  9026835 cagaaagggggaaaaagatggggtgcaaaatcgctcaa--aaaataaaggggtgcaaaattgcacaattaacaaaagata-ggaggaaaaatgcaattaa 9026739  T
Q  127 gcctat 132  Q
     |||||    
T  9026738 acctat 9026733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 17372387 - 17372298
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||||||||||||||| ||||||  ||||| | ||||||||||||||||||||| |||||| ||| |||| ||| |||||||||||||    
T  17372387 aaaagatggggtgcaaaatcgctcaaa-aaaaacagggggtgcaaaatcgcacaattagcaaaaaatagggggaaaaggtgcaattaagcc 17372298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 47666287 - 47666389
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  || |||  |||||||||||||| ||||||||||||||  ||| |||||||||||||||||||    
T  47666287 cagaaagggggaaaactatagggggcaaaatcgctcgttttaaacaatggggtgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaa 47666386  T
Q  127 gcc 129  Q
    |||    
T  47666387 gcc 47666389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 22429260 - 22429159
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || |||  |||||| ||||  |||||| ||| ||||||||| ||||||||||||||||| ||| ||| |||||||||||||||    
T  22429260 cagaaagggggaaaactataggggacaaaatcgctcgtttaaaactattgggtgcaaagtcgcacaattggcaaaatataggggagaaaagtgcaattaa 22429161  T
Q  127 gc 128  Q
    ||    
T  22429160 gc 22429159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 45060863 - 45060930
Alignment:
Q  67 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatat 134  Q
    ||||| || ||||| |||||||||||||| |||||||||| ||| |||||||||||||||||||||||    
T  45060863 aaaaagatagggtgtaaaatcgcacaattagcaaaagataggggtgaaaagtgcaattaagcctatat 45060930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 129
Target Start/End: Complemental strand, 1927834 - 1927772
Alignment:
Q  67 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||| || ||||||||||||||| ||||||||||||||| |||||||| |||||||||||||    
T  1927834 aaaaagatagggtgcaaaatcgcataattggcaaaagataggggggaaaggtgcaattaagcc 1927772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 17372433 - 17372525
Alignment:
Q  34 ggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaattaa 126  Q
    |||| ||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||||| |||||||| || | |||||||| |||||    
T  17372433 ggggcaaaagatggggtgcaaaattgctcaaa-aaaaagagggggtgcaaaatcgcacaattggcaaaaagatagggtgcaaaagtgccattaa 17372525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 21895720 - 21895655
Alignment:
Q  67 aaaaatatggggtgcaaaatcgcacaattggcaaaagata-tgggggaaaagtgcaattaagccta 131  Q
    ||||| ||||||||||||||| |||||||||||||| ||| ||||| |||||||||||||||||||    
T  21895720 aaaaagatggggtgcaaaatcacacaattggcaaaacatagtggggaaaaagtgcaattaagccta 21895655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 3353191 - 3353128
Alignment:
Q  65 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||||| ||||||||||||||||||||||||| ||||  ||| ||||||||||||||||||||||    
T  3353191 ttaaaactatggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaagcc 3353128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 18874935 - 18874879
Alignment:
Q  76 gggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctat 132  Q
    |||||||||||||||||||| |||||||||| |||| |||||||||||| |||||||    
T  18874935 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattgagcctat 18874879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 26007259 - 26007176
Alignment:
Q  51 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatatt 135  Q
    ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| ||||||||| ||||||||||||| ||||    
T  26007259 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaa-tgcaattaagcctttatt 26007176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 26007571 - 26007675
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||  ||||||||||| ||||||||||||  ||| |||| ||||||||||||||    
T  26007571 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaattatgaagtgcaaaatcgtacaattggcaaactatagggggaaaaagtgcaattaa 26007670  T
Q  127 gccta 131  Q
     ||||    
T  26007671 accta 26007675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 47870910 - 47870820
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaa-tcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctat 132  Q
    ||||||||||||||||||| |||||   ||||| | ||||||||||| ||||| |||| |||||||||| |||| ||||||||||||||||||||    
T  47870910 aaaagatggggtgcaaaatcgctca---aaaaaaaaggggtgcaaaattcgcataattagcaaaagata-ggggaaaaagtgcaattaagcctat 47870820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 13657536 - 13657445
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatgggg-tgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||||||||||||||| ||||||  ||||| | |||| |||||||||||||||||||||||| |   ||| |||||||| |||||||||    
T  13657536 aaaagatggggtgcaaaatcgctcaaaaaaaaagaggggggtgcaaaatcgcacaattggcaaaaaaatagggagaaaagtgtaattaagcc 13657445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 21896474 - 21896564
Alignment:
Q  38 aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||| ||||||||||||||| ||||   |||||  |||||||||||||||||||||||| ||||| ||| |||| |||| ||||||||||||    
T  21896474 aaaatgatggggtgcaaaatcgctcgtataaaaccatggggtgcaaaatcgcacaattgacaaaatata-ggggaaaaaatgcaattaagcc 21896564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 9026998 - 9027086
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||||||||||||||||||  |||||  ||||| | |||||| ||||| |||||||| |||||||||| |||||||||||| |||||||||    
T  9026998 aaaagatggggtgcaaaatcactcaa-aaaaaacaaggggtgtaaaattgcacaattagcaaaagata-gggggaaaagtgaaattaagcc 9027086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 10771628 - 10771502
Alignment:
Q  1 ctaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaa 100  Q
    |||||||||||||||| ||||||||||||||||||  |||| ||| || || ||||| ||||  ||||||| |||| ||  ||||||||||||||| |||    
T  10771628 ctaaaacacatggggg-ccttcaaaccagaaaggga-aaaatgatagg-tgtaaaatcgctcggttaaaaacatggagtaaaaaatcgcacaattgacaa 10771532  T
Q  101 aagatatgggggaaaagtgcaattaagccta 131  Q
    |||||| |||  |||| ||||||||||||||    
T  10771531 aagata-gggaaaaaaatgcaattaagccta 10771502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 53688255 - 53688356
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| ||||  || ||| ||||| ||||||||||||||||||||||||  ||| ||||  |||||||||||||    
T  53688255 cagaaagggggaaaactatagggggcaaaatcgctcgttttaaactatggagtgcaaaatcgcacaattggcaaactata-ggggagaaagtgcaattaa 53688353  T
Q  127 gcc 129  Q
    |||    
T  53688354 gcc 53688356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 3353527 - 3353607
Alignment:
Q  51 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctat 132  Q
    ||||||| ||||  |||||| |||| |||||||||||||||||||||||||  ||| ||||||||||||||| ||| |||||    
T  3353527 gcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaactaaacctat 3353607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 13657580 - 13657673
Alignment:
Q  34 ggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaattaa 126  Q
    |||| |||||||||||||||||||  |||||  ||| |   |||||||||||||||||||||||| |||||||| |||  ||||||||||||||    
T  13657580 ggggtaaaagatggggtgcaaaatttctcaaaaaaagaagaggggtgcaaaatcgcacaattggcaaaaagataggggacaaaagtgcaattaa 13657673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 131
Target Start/End: Complemental strand, 42455853 - 42455788
Alignment:
Q  66 taaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    ||||| ||| ||| ||||||||||||||||| ||||  ||| ||||||||||||||||||||||||    
T  42455853 taaaactatagggggcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagccta 42455788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 53766569 - 53766634
Alignment:
Q  65 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    |||||| ||| ||||||||||| |||||||| |||||  ||| |||||||||||||||||||||||    
T  53766569 ttaaaactatagggtgcaaaattgcacaatttgcaaactataggggggaaaagtgcaattaagcct 53766634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 129
Target Start/End: Original strand, 3644781 - 3644837
Alignment:
Q  73 atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||||||||||||||||||||||  ||||| ||| ||||||||| ||||||||||||    
T  3644781 atggggtgcaaaatcgcacaattaacaaaaaataagggggaaaaatgcaattaagcc 3644837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 4947362 - 4947263
Alignment:
Q  28 agaaagggggaaaaagatggggtgcaaaatagctcaattaaaaat--atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||| | |||||||||||||||||||| |||| |  ||||||  |  ||||||||||||||||||||  ||||| ||| ||| ||||||||||||||    
T  4947362 agaaaggagcaaaaagatggggtgcaaaattgctcgaaaaaaaatagagagggtgcaaaatcgcacaattaacaaaaaataggggtgaaaagtgcaatta 4947263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 22429548 - 22429647
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||| ||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| || || |||||||||||||    
T  22429548 cagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactata-ggagggaaagtgcaattaa 22429646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 36180656 - 36180555
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || |||  |||||| ||||  |||||| |||||| |||||||||||||||||| ||||   ||| ||||||| ||||||||||    
T  36180656 cagaaagggggaaaactataggggtcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaa--ctataggggaaatgtgcaattaa 36180559  T
Q  127 gcct 130  Q
    ||||    
T  36180558 gcct 36180555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 1101182 - 1101237
Alignment:
Q  76 gggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    ||||| ||||||||||||   |||||||||| ||||||||||||||||||||||||    
T  1101182 gggtgaaaaatcgcacaaaaagcaaaagataagggggaaaagtgcaattaagccta 1101237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 8315083 - 8315137
Alignment:
Q  76 gggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    ||||||||||||||||||||| ||||| ||| ||||| ||||||||||||||||||    
T  8315083 gggtgcaaaatcgcacaattgacaaaatata-ggggggaaagtgcaattaagccta 8315137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 14015957 - 14016019
Alignment:
Q  68 aaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    |||| ||||||||||||||||||||||| |||||||||| ||  ||||||||||||||| ||||    
T  14015957 aaaagatggggtgcaaaatcgcacaattagcaaaagata-ggatgaaaagtgcaattaaaccta 14016019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 26540833 - 26540915
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaa 122  Q
    ||||||||||||||||||| ||||||  ||||| | |  ||| |||||||||||||| |||||||||| |||||||| ||||||    
T  26540833 aaaagatggggtgcaaaatcgctcaaaaaaaaaaaggaagtgtaaaatcgcacaattagcaaaagata-gggggaaaggtgcaa 26540915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 53766241 - 53766166
Alignment:
Q  51 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||| ||||  |||||| ||||||||||||||||||||||||| ||||  ||| | || ||||||||||||||    
T  53766241 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaa 53766166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 24485123 - 24485049
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaa 101  Q
    |||||||||| ||||  || ||| || |||| ||||  |||||| ||||||||||||||||||||||||||||||    
T  24485123 cagaaaggggaaaaactatagggggcgaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 24485049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 36180980 - 36181046
Alignment:
Q  65 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    |||||| |||||||| |||||||||||||||  ||||  ||| || |||||||||||||||||||||    
T  36180980 ttaaaactatggggtacaaaatcgcacaattaacaaactatagggaggaaaagtgcaattaagccta 36181046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 42627511 - 42627599
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||| |||||||||||||| |||||   ||||| | ||| ||||||||| ||||||| |||||||||| | ||||||||||||||||||||    
T  42627511 aaaaaatggggtgcaaaatcgctcataaaaaaaga-gggatgcaaaatcacacaattagcaaaagata-gagggaaaagtgcaattaagcc 42627599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 47665963 - 47665909
Alignment:
Q  77 ggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    |||||||||||||||||||| ||||  ||| |||| |||||||||||||||||||    
T  47665963 ggtgcaaaatcgcacaattgacaaactataaggggaaaaagtgcaattaagccta 47665909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 1927858 - 1927815
Alignment:
Q  13 gggggccttcaaaccagaaagggggaaaaagatggggtgcaaaat 57  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  1927858 gggggccttcaaaccagaaa-ggggaaaaagatagggtgcaaaat 1927815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 14015824 - 14015923
Alignment:
Q  29 gaaagggggaaaaagatggggtgcaaaatagctcaattaaa-aatatggggtgcaaaatcgcacaattggc-aaaagatatggggg-aaaagtgcaatta 125  Q
    ||||| ||| |||||| |||||||||||| ||||||  ||| || | || ||||||||||||||||||||| |||||||| ||||| |||||||||||||    
T  14015824 gaaagagggcaaaaga-ggggtgcaaaatcgctcaaaaaaagaagagggagtgcaaaatcgcacaattggcaaaaagataggggggcaaaagtgcaatta 14015922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 45060644 - 45060596
Alignment:
Q  81 caaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||||||||| |||| ||||||||||  |||||||||||||||||||||    
T  45060644 caaaatcgcataattagcaaaagatagtggggaaaagtgcaattaagcc 45060596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 1100968 - 1100917
Alignment:
Q  76 gggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaag 127  Q
    ||||| |||||||||||||| |||||||||| || ||| |||||||||||||    
T  1100968 gggtgaaaaatcgcacaatttgcaaaagatagggtggataagtgcaattaag 1100917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 128
Target Start/End: Original strand, 17372560 - 17372645
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 128  Q
    |||||||||||||||||||   | ||  ||||| | ||||||||||||||||||||| | |||  |||| ||||||||||||||||||||    
T  17372560 aaaagatggggtgcaaaatcattaaa--aaaaaaaaggggtgcaaaatcgcacaattagtaaa--atataggggaaaagtgcaattaagc 17372645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 42456171 - 42456217
Alignment:
Q  51 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattgg 97  Q
    ||||||| ||||  |||||| ||||||||||||||||||||||||||    
T  42456171 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgg 42456217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 44008353 - 44008454
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||||| |||||  || ||| | ||||| ||||  |||||| |||| |||||||||| ||||||||||||||  ||| ||  |||||||||||||||    
T  44008353 cagaaagggagaaaactatagggggaaaaattgctcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggatgaaaagtgcaattaa 44008451  T
Q  127 gcc 129  Q
    |||    
T  44008452 gcc 44008454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 10348581 - 10348480
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||| ||||  || |||  |||||| ||||  |||||| |||||| |||||||| | ||||||| ||||  ||| ||| |||||||||||||||    
T  10348581 cagaaaggggaaaaactataggggacaaaatcgctcgtttaaaattatgggatgcaaaattgaacaattgacaaactatacgggagaaaagtgcaattaa 10348482  T
Q  127 gc 128  Q
    ||    
T  10348481 gc 10348480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 129
Target Start/End: Original strand, 13657735 - 13657776
Alignment:
Q  88 gcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||||||| |||||||||||| | ||||||||||||||||||    
T  13657735 gcacaattagcaaaagatatgagagaaaagtgcaattaagcc 13657776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 20968897 - 20968946
Alignment:
Q  76 gggtgcaaaatcgcacaattggcaaaa-gatatgggggaaaagtgcaatt 124  Q
    |||||||||||||||||||| |||||| |||| |||| ||||||||||||    
T  20968897 gggtgcaaaatcgcacaattagcaaaatgataaggggcaaaagtgcaatt 20968946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 126
Target Start/End: Original strand, 1101090 - 1101141
Alignment:
Q  75 ggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||||||||| | |||||||| |||| ||||||||||||||    
T  1101090 ggggtgcaaaatcgcacaattgacaaaaagata-ggggcaaaagtgcaattaa 1101141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 17441066 - 17441118
Alignment:
Q  78 gtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||||||||||||||  |||||||||  | |||||| |||||||||||||    
T  17441066 gtgcaaaatcgcacaattaacaaaagatagagaggaaaaatgcaattaagcct 17441118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 124
Target Start/End: Complemental strand, 18875065 - 18875017
Alignment:
Q  77 ggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 124  Q
    ||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  18875065 ggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 18875017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 21895749 - 21895701
Alignment:
Q  9 catggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaat 57  Q
    |||||||| || | ||| |||||||||| ||||||||||||||||||||    
T  21895749 catgggggaccataaaatcagaaaggggaaaaaagatggggtgcaaaat 21895701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 45758 - 45862
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  45758 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagata-gggggaaaagtgcaatta 45856  T
Q  126 agccta 131  Q
    ||||||    
T  45857 agccta 45862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 45626 - 45536
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||| ||||||||||| ||||||  ||||| | || ||||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  45626 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggagtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcct 45536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 1371 - 1474
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  1371 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagatagggggaaaaagtgcaatta 1470  T
Q  126 agcc 129  Q
    ||||    
T  1471 agcc 1474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 1208 - 1118
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||| ||||||||||| ||||||  ||||| | |||||||||||||||||||||  ||||||||| |||| |||||||||||||||||    
T  1208 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagatagggggaaaaagtgcaattaagcc 1118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 1297 - 1346
Alignment:
Q  76 gggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 124  Q
    |||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  1297 gggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 1346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 33 - 130
Target Start/End: Original strand, 25327 - 25424
Alignment:
Q  33 gggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    |||| |||||||||||||||||||| ||||||  ||||| | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  25327 ggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcct 25424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 124
Target Start/End: Original strand, 25247 - 25295
Alignment:
Q  77 ggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 124  Q
    ||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  25247 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 25295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 64; Significance: 5e-28; HSPs: 3)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 6648 - 6750
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  6648 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagata-gggggaaaagtgcaatta 6746  T
Q  126 agcc 129  Q
    ||||    
T  6747 agcc 6750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 6485 - 6393
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaat-atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||||||||||||||| ||| ||  |||||  | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  6485 aaaagatggggtgcaaaatcgctaaaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcct 6393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 124
Target Start/End: Original strand, 6575 - 6623
Alignment:
Q  77 ggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaatt 124  Q
    ||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  6575 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaatt 6623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 62; Significance: 8e-27; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 439019 - 438930
Alignment:
Q  40 aaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    |||||||||||||||||| ||||||  ||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  439019 aaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 438930  T

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Target: scaffold0001; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 439165 - 439255
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    ||||||||||||||||||| ||||||  ||||| | ||| ||||||||||||||||| |||||||||| |||| |||||||||||||||||||    
T  439165 aaaagatggggtgcaaaatcgctcaa--aaaaagaggggatgcaaaatcgcacaattagcaaaagataaggggaaaaagtgcaattaagccta 439255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 183611 - 183717
Alignment:
Q  24 aaccagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaa-aatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgca 121  Q
    ||||| |||||||| ||||||||||| |||||||| |||||| |||| || | |||||||||| |||||||||| |||||| ||| ||||||||||||||    
T  183611 aaccataaagggggcaaaaagatggg-tgcaaaatcgctcaaataaagaagagggggtgcaaa-tcgcacaattagcaaaatataggggggaaaagtgca 183708  T
Q  122 attaagcct 130  Q
    |||||||||    
T  183709 attaagcct 183717  T

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Target: scaffold0001; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 183453 - 183367
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||| ||| |||||||||| ||||||  || || |  ||||||||||||| ||||||| ||||||||| |||||||||||||||||||    
T  183453 aaaatatgaggtgcaaaatcgctcaaaaaagaagagagggtgcaaaatcgtacaattgacaaaagata-gggggaaaagtgcaattaa 183367  T

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Target: scaffold0001; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 126
Target Start/End: Original strand, 183497 - 183592
Alignment:
Q  33 gggggaaaaagatggggtgcaaaatagctcaattaaa-aatatggggtgcaaaatcgcacaattgg-caaaagatatgggggaaaagtgcaattaa 126  Q
    ||||| ||||||| ||||| ||||| ||||||  ||| || | ||| |||||||||||||||||||  |||||||| |||| ||||||||||||||    
T  183497 gggggcaaaagatagggtgaaaaatcgctcaaaaaaataagacgggttgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaattaa 183592  T

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Target: scaffold0535 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 10138 - 10011
Alignment:
Q  3 aaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaa 102  Q
    |||||||||| |||||| || |||||||||||||| ||||||  | || |||||| | ||||||||||  || || |||||||||| |||||||||||||    
T  10138 aaaacacatgaggggccatcgaaccagaaagggggcaaaagagagtgtacaaaatcgttcaattaaaaggattggatgcaaaatcgtacaattggcaaaa 10039  T
Q  103 gatatgggggaaaagtgcaattaagcct 130  Q
    |||| |||| ||||||||||||||||||    
T  10038 gatagggggcaaaagtgcaattaagcct 10011  T

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Target: scaffold0017 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 185226 - 185328
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||| |||||||  || ||| ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| || ||||||||||||||||    
T  185226 cagaaagagggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaa 185325  T
Q  127 gcc 129  Q
    |||    
T  185326 gcc 185328  T

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Target: scaffold0017; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 184941 - 184840
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||  ||||||| ||||  |||||| ||||||||||||||| ||||| ||| ||||  |||  || |||||||||||||||    
T  184941 cagaaagggggaaaactataggtggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacagttgacaaactatagaggagaaaagtgcaattaa 184842  T
Q  127 gc 128  Q
    ||    
T  184841 gc 184840  T

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Target: scaffold0460 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 432 - 329
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||| ||||||||  || ||| ||||||| ||||  |||||| |||||| |||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  432 cagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 333  T
Q  127 gcct 130  Q
    ||||    
T  332 gcct 329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 739 - 816
Alignment:
Q  51 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  ||| |||| |||||||||||||||||    
T  739 gcaaaatcgctcgtttaaaattatggggtgcaaaatcgcacaattggcaaactata-ggggaaaaagtgcaattaagcc 816  T

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Target: scaffold0176 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 136
Target Start/End: Original strand, 20033 - 20104
Alignment:
Q  65 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatatta 136  Q
    |||||| ||||||| ||||||||||||||||| ||||  ||| |||||||||||||||||||||||||||||    
T  20033 ttaaaactatggggggcaaaatcgcacaattgacaaactataagggggaaaagtgcaattaagcctatatta 20104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 140
Target Start/End: Complemental strand, 19698 - 19610
Alignment:
Q  51 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatattatata 140  Q
    ||||||| ||||  |||||| ||||||||||||||||||||||||||||||  |||| |||||||| ||||||||||||| || ||||||    
T  19698 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatat-ggggaaaattgcaattaagcctttaatatata 19610  T

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Target: scaffold0041 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 38647 - 38750
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||||||||||  || ||| ||||||| | ||  |||| | ||||||||||||||||||||||||||||||  ||| |||| ||||||||||||||    
T  38647 cagaaagggggaaaactatagggggcaaaatcgttcgtttaagactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaa 38746  T
Q  127 gcct 130  Q
    ||||    
T  38747 gcct 38750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 38353 - 38284
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattg 96  Q
    ||||||| |||||||  || ||| ||||||| ||||| |||||| |||||| ||||||||||||||||||    
T  38353 cagaaagagggaaaactatagggggcaaaatcgctcatttaaaactatgggatgcaaaatcgcacaattg 38284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 412024 - 411923
Alignment:
Q  27 cagaaaggggg-aaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||||||| ||||||||||| ||| ||  ||||| | |||||||||||||||||||||| ||||||||| ||||| ||||||||||||    
T  412024 cagaaagggggcaaaaagatagggtgcaaaatcgcttaaa-aaaaagagggggtgcaaaatcgcacaattgacaaaagata-gggggtaaagtgcaatta 411927  T
Q  126 agcc 129  Q
    ||||    
T  411926 agcc 411923  T

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Target: scaffold0029 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 10008 - 9904
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatgggg-tgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    |||||||||||||||  || ||| ||||||| ||||  |||||| ||||||| || ||||||||||||||||||||  ||| |||| |||||||||||||    
T  10008 cagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggggtgaaaaatcgcacaattggcaaactatagggggaaaaagtgcaatta 9909  T
Q  126 agcct 130  Q
    |||||    
T  9908 agcct 9904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 10311 - 10373
Alignment:
Q  67 aaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagccta 131  Q
    |||| ||| ||||||||||||| ||||||||||||   ||| |||||||||||| ||||||||||    
T  10311 aaaactatagggtgcaaaatcggacaattggcaaa--ctataggggaaaagtgctattaagccta 10373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 134
Target Start/End: Original strand, 17119 - 17214
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatgg-ggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatat 134  Q
    ||||||||||||||||||| ||||||  |||||   || |||||||||| |||||||| |||||||||| |||||||||||||||||||||| ||||    
T  17119 aaaagatggggtgcaaaatcgctcaaaaaaaaaagaggcggtgcaaaattgcacaattagcaaaagata-gggggaaaagtgcaattaagccaatat 17214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 16956 - 16853
Alignment:
Q  27 cagaaaggg-ggaaaaagatggggtgcaaaatagctc--aattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaat 123  Q
    ||||||||| |||||||||||||||||||||| ||||  ||  ||||| | |||||||| |||||||||||| ||||||||||  ||||||||  |||||    
T  16956 cagaaagggaggaaaaagatggggtgcaaaatcgctcaaaaaaaaaaagagggggtgcataatcgcacaattagcaaaagata--ggggaaaaaggcaat 16859  T
Q  124 taagcc 129  Q
    ||||||    
T  16858 taagcc 16853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 50458 - 50560
Alignment:
Q  27 cagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatgggg-tgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaatta 125  Q
    ||||||||||| |||  || ||| ||||||| ||||  |||||| ||||||| |||||||||||||||||||||||  ||| ||||||||||||||||||    
T  50458 cagaaagggggtaaactatagggggcaaaattgctcgtttaaaactatgggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaatta 50556  T
Q  126 agcc 129  Q
    ||||    
T  50557 agcc 50560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 130
Target Start/End: Complemental strand, 50151 - 50074
Alignment:
Q  51 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    ||||||| ||||  |||||| ||||||||||||||| ||||||||| ||||   ||| |||| |||||||||||||||||    
T  50151 gcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattgacaaa--ctatagggggaaagtgcaattaagcct 50074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 205774 - 205681
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctatatt 135  Q
    |||||||| |||||||||| | ||||  ||||| | ||||||||||||||||||||| |||||||||| ||| ||||| ||||||||||||| ||||    
T  205774 aaaagatgaggtgcaaaatcgttcaa--aaaaagagggggtgcaaaatcgcacaattagcaaaagata-gggagaaaaatgcaattaagcctttatt 205681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 7510 - 7454
Alignment:
Q  73 atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcct 130  Q
    |||||||||||||||||| |||| |||||||||| |||| ||||||||||||||||||    
T  7510 atggggtgcaaaatcgcataattagcaaaagata-ggggaaaaagtgcaattaagcct 7454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 7600 - 7653
Alignment:
Q  75 ggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||| ||||||||||||||| |||||||||| |||| |||||||||||||||||    
T  7600 ggggtacaaaatcgcacaattagcaaaagata-ggggaaaaagtgcaattaagcc 7653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 1566 - 1511
Alignment:
Q  73 atggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcc 129  Q
    ||||||||||||||| |||||||||||||||||| | || |||||||||||||||||    
T  1566 atggggtgcaaaatcacacaattggcaaaagata-gaggaaaaagtgcaattaagcc 1511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 1747 - 1834
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaatta-aaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaa 126  Q
    ||||||| ||||||||||| ||||||  | |||| | | ||||||||||||||||||   ||||||||| |||||||||||||||||||    
T  1747 aaaagatagggtgcaaaatcgctcaaaaagaaaagaggaggtgcaaaatcgcacaataaacaaaagata-gggggaaaagtgcaattaa 1834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 6877 - 6927
Alignment:
Q  76 gggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagc 128  Q
    ||||||||||| ||||||||||||||||||| ||||| |||||||||||||||    
T  6877 gggtgcaaaat-gcacaattggcaaaagata-ggggggaaagtgcaattaagc 6927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 6659 - 6604
Alignment:
Q  77 ggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaattaagcctat 132  Q
    ||||||||||| |||||||  ||||||||| ||||||| |||||||||||| ||||    
T  6659 ggtgcaaaatcacacaattaacaaaagataggggggaacagtgcaattaagtctat 6604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 73070 - 72967
Alignment:
Q  24 aaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagatatgggggaaaagtgcaat 123  Q
    |||||||| || || ||||||||| |||||||||  || ||  ||||| | | |||||||||| |||||||| ||||||||||  |||||||| ||||||    
T  73070 aaccagaatggcggcaaaagatggagtgcaaaatcacttaaa-aaaaagaggcggtgcaaaattgcacaattagcaaaagataaaggggaaaaatgcaat 72972  T
Q  124 taagc 128  Q
    |||||    
T  72971 taagc 72967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 73177 - 73089
Alignment:
Q  39 aaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggc-aaaagatatgggggaaaagtgcaattaa 126  Q
    |||||||| |||||||||| || |||  || || | |||||||||||||||||| ||| | |||||||| |||  ||||||||||||||    
T  73177 aaaagatgaggtgcaaaatcgcccaaaaaagaacagggggtgcaaaatcgcacagttgacaaaaagataggggacaaaagtgcaattaa 73089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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