View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21675_high_17 (Length: 370)
Name: NF21675_high_17
Description: NF21675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21675_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 80 - 359
Target Start/End: Original strand, 31473116 - 31473395
Alignment:
| Q |
80 |
gaatttgtattccataattagttaagttctgttaatctcctgaggctcctgaactctacgagtcttttccagtaagtcgtgtgctatttctaacttgcca |
179 |
Q |
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| T |
31473116 |
gaatttgtattccataattagttaacttctgttaatctcctgaggctcctgaactctacgagtcttttccagtaagtcgtgtgctatttctaacttgcca |
31473215 |
T |
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| Q |
180 |
cacttttgaaactcatgctcaaatgtgtctctagcataagctgataaacgaacacccttttcgagcattgcttttactttctcgtacgcatcacctagtt |
279 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31473216 |
cacttttgaaactcatgctcaaatgtgtctctagcataagctgataaacgaacacccttttcgagcattgcttttactttctcgtacgcatcacctagtt |
31473315 |
T |
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| Q |
280 |
gaccttccttacacaacttcaacaacttctgattctccaattttctttccaatttatgacacaaatccaactgatgatgt |
359 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
31473316 |
gaccttccttacacaacttcaacaacttctgattctccaattttctttccaatttatgacacaaatccaactgatcatgt |
31473395 |
T |
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