View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21675_high_22 (Length: 355)

Name: NF21675_high_22
Description: NF21675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21675_high_22
NF21675_high_22
[»] chr3 (61 HSPs)
chr3 (158-337)||(53800054-53800233)
chr3 (14-157)||(27899082-27899225)
chr3 (14-157)||(53190760-53190903)
chr3 (14-157)||(2226153-2226296)
chr3 (14-157)||(54898437-54898580)
chr3 (15-157)||(21348723-21348865)
chr3 (14-158)||(30599919-30600063)
chr3 (14-157)||(46112487-46112630)
chr3 (14-144)||(35905713-35905843)
chr3 (14-155)||(43765139-43765280)
chr3 (14-157)||(51684610-51684753)
chr3 (14-157)||(41977750-41977893)
chr3 (14-157)||(17515310-17515453)
chr3 (14-157)||(23293171-23293314)
chr3 (14-154)||(42279510-42279650)
chr3 (14-127)||(46197750-46197863)
chr3 (78-157)||(23291570-23291649)
chr3 (23-157)||(3152228-3152362)
chr3 (14-154)||(2377032-2377172)
chr3 (23-157)||(44794208-44794341)
chr3 (31-151)||(2660218-2660338)
chr3 (81-157)||(44267981-44268057)
chr3 (78-157)||(51686404-51686483)
chr3 (79-157)||(611233-611311)
chr3 (68-158)||(41979352-41979442)
chr3 (68-154)||(54412547-54412633)
chr3 (68-157)||(38191895-38191984)
chr3 (68-157)||(38193510-38193599)
chr3 (68-157)||(46308807-46308896)
chr3 (68-157)||(53094273-53094362)
chr3 (78-154)||(42282483-42282559)
chr3 (86-157)||(54900092-54900163)
chr3 (78-156)||(2378993-2379071)
chr3 (68-157)||(3150252-3150341)
chr3 (81-157)||(30598337-30598413)
chr3 (78-157)||(46114115-46114195)
chr3 (86-157)||(53092623-53092694)
chr3 (96-157)||(7884927-7884988)
chr3 (68-157)||(46310436-46310525)
chr3 (68-157)||(53187742-53187831)
chr3 (78-158)||(48829355-48829435)
chr3 (78-157)||(600725-600804)
chr3 (86-157)||(44795908-44795979)
chr3 (86-152)||(2661926-2661992)
chr3 (68-157)||(7883328-7883417)
chr3 (68-157)||(46609149-46609238)
chr3 (68-157)||(46611303-46611392)
chr3 (14-103)||(48830807-48830896)
chr3 (14-72)||(7884874-7884932)
chr3 (68-157)||(35903825-35903914)
chr3 (81-157)||(21350618-21350694)
chr3 (88-147)||(17516993-17517052)
chr3 (94-157)||(27897151-27897214)
chr3 (14-72)||(44276197-44276255)
chr3 (50-147)||(23774162-23774259)
chr3 (22-147)||(48633887-48634012)
chr3 (14-57)||(600809-600852)
chr3 (86-157)||(28626411-28626482)
chr3 (17-147)||(2977313-2977443)
chr3 (21-103)||(19987602-19987684)
chr3 (22-147)||(31887441-31887566)
[»] chr8 (47 HSPs)
chr8 (158-337)||(36672701-36672880)
chr8 (14-157)||(8609788-8609931)
chr8 (14-157)||(13282478-13282621)
chr8 (14-157)||(38547228-38547371)
chr8 (20-154)||(42941777-42941911)
chr8 (14-157)||(13108337-13108480)
chr8 (14-157)||(41042585-41042728)
chr8 (14-157)||(7745113-7745256)
chr8 (20-154)||(26242321-26242455)
chr8 (21-154)||(41825652-41825785)
chr8 (21-157)||(13486107-13486243)
chr8 (14-156)||(5036446-5036592)
chr8 (14-159)||(22272332-22272479)
chr8 (13-160)||(27691151-27691301)
chr8 (68-157)||(42943426-42943515)
chr8 (78-158)||(34681076-34681156)
chr8 (68-157)||(22273891-22273980)
chr8 (78-157)||(26238726-26238805)
chr8 (68-157)||(5038062-5038150)
chr8 (14-114)||(9673166-9673266)
chr8 (23-159)||(33708814-33708949)
chr8 (86-157)||(38548849-38548920)
chr8 (78-157)||(41823890-41823969)
chr8 (78-157)||(43262147-43262226)
chr8 (68-157)||(601704-601793)
chr8 (68-157)||(27692837-27692926)
chr8 (68-157)||(33762713-33762802)
chr8 (68-157)||(35510819-35510908)
chr8 (21-103)||(40339688-40339770)
chr8 (68-157)||(13106804-13106893)
chr8 (68-157)||(29237151-29237240)
chr8 (68-157)||(29239187-29239276)
chr8 (68-157)||(33761069-33761158)
chr8 (68-157)||(35509214-35509303)
chr8 (89-157)||(13484545-13484613)
chr8 (68-156)||(33707207-33707295)
chr8 (68-160)||(8608234-8608327)
chr8 (98-158)||(600759-600819)
chr8 (86-154)||(13284013-13284081)
chr8 (68-157)||(15308261-15308350)
chr8 (68-157)||(15488630-15488719)
chr8 (51-160)||(27406935-27407044)
chr8 (78-154)||(9671980-9672056)
chr8 (81-157)||(41040720-41040796)
chr8 (67-142)||(29694316-29694391)
chr8 (86-154)||(27404213-27404281)
chr8 (17-121)||(33750368-33750472)
[»] chr5 (33 HSPs)
chr5 (14-159)||(7267841-7267986)
chr5 (14-157)||(17574318-17574461)
chr5 (14-158)||(36057594-36057738)
chr5 (14-158)||(30468261-30468405)
chr5 (14-157)||(34327635-34327778)
chr5 (14-157)||(2179787-2179930)
chr5 (14-157)||(8539675-8539818)
chr5 (78-160)||(8541281-8541363)
chr5 (68-157)||(12738736-12738825)
chr5 (68-157)||(12801559-12801648)
chr5 (68-157)||(30463900-30463989)
chr5 (31-157)||(24541209-24541336)
chr5 (21-154)||(18624996-18625129)
chr5 (68-157)||(2852886-2852975)
chr5 (68-157)||(28813765-28813856)
chr5 (31-157)||(2854325-2854450)
chr5 (68-157)||(7269446-7269535)
chr5 (68-157)||(32134231-32134320)
chr5 (81-157)||(34328840-34328916)
chr5 (23-157)||(29621771-29621905)
chr5 (68-157)||(21842992-21843081)
chr5 (51-160)||(42473625-42473734)
chr5 (66-147)||(43492131-43492212)
chr5 (78-154)||(41493847-41493923)
chr5 (89-154)||(28822111-28822176)
chr5 (184-270)||(32891659-32891747)
chr5 (68-157)||(40782211-40782300)
chr5 (76-155)||(17577943-17578022)
chr5 (86-157)||(29620138-29620209)
chr5 (23-154)||(40780553-40780684)
chr5 (14-53)||(28819391-28819430)
chr5 (86-157)||(42471548-42471619)
chr5 (34-120)||(35395370-35395456)
[»] chr2 (35 HSPs)
chr2 (14-157)||(39664749-39664892)
chr2 (14-157)||(44709746-44709889)
chr2 (20-157)||(16763076-16763213)
chr2 (14-157)||(19908247-19908391)
chr2 (14-157)||(2766934-2767077)
chr2 (21-157)||(14389092-14389228)
chr2 (14-157)||(40560223-40560366)
chr2 (14-154)||(17696209-17696349)
chr2 (14-153)||(42519206-42519346)
chr2 (23-158)||(6797506-6797641)
chr2 (20-157)||(39455169-39455306)
chr2 (78-157)||(19581414-19581493)
chr2 (78-154)||(19906685-19906761)
chr2 (14-154)||(37645490-37645630)
chr2 (14-121)||(16377198-16377305)
chr2 (68-157)||(16376736-16376825)
chr2 (68-158)||(39663153-39663243)
chr2 (68-157)||(14387349-14387438)
chr2 (68-157)||(16764611-16764700)
chr2 (81-158)||(34400313-34400390)
chr2 (32-157)||(24208061-24208186)
chr2 (88-157)||(40561898-40561967)
chr2 (68-160)||(24205595-24205687)
chr2 (23-157)||(37020508-37020642)
chr2 (32-157)||(6786000-6786125)
chr2 (81-154)||(6799421-6799494)
chr2 (68-157)||(39456780-39456869)
chr2 (17-110)||(17946141-17946234)
chr2 (68-157)||(37022185-37022274)
chr2 (17-101)||(7744099-7744183)
chr2 (113-157)||(42517558-42517602)
chr2 (68-157)||(2577480-2577569)
chr2 (68-157)||(6783364-6783453)
chr2 (67-154)||(31475079-31475166)
chr2 (67-154)||(37646477-37646564)
[»] chr1 (45 HSPs)
chr1 (14-157)||(34778119-34778262)
chr1 (14-157)||(2869579-2869722)
chr1 (14-157)||(4855947-4856090)
chr1 (14-157)||(6818659-6818802)
chr1 (14-157)||(25278349-25278492)
chr1 (14-157)||(27087283-27087426)
chr1 (14-157)||(31238476-31238619)
chr1 (14-157)||(50556078-50556221)
chr1 (14-160)||(37344339-37344485)
chr1 (14-157)||(51896133-51896276)
chr1 (14-157)||(3013451-3013600)
chr1 (14-157)||(46583537-46583680)
chr1 (68-157)||(31236819-31236908)
chr1 (14-154)||(33602625-33602765)
chr1 (14-117)||(15104481-15104584)
chr1 (62-157)||(25278982-25279077)
chr1 (51-157)||(52641888-52641994)
chr1 (78-154)||(3011858-3011934)
chr1 (68-156)||(50554164-50554252)
chr1 (86-157)||(8167942-8168013)
chr1 (68-157)||(25276742-25276831)
chr1 (81-157)||(37088149-37088225)
chr1 (66-154)||(52643648-52643736)
chr1 (68-157)||(26223587-26223676)
chr1 (68-157)||(34776569-34776658)
chr1 (68-157)||(46582010-46582099)
chr1 (81-157)||(2871089-2871165)
chr1 (89-156)||(6816866-6816933)
chr1 (78-157)||(25278854-25278933)
chr1 (86-157)||(27089297-27089368)
chr1 (68-159)||(37345962-37346053)
chr1 (23-157)||(9121658-9121792)
chr1 (95-157)||(33599187-33599249)
chr1 (68-154)||(51894570-51894656)
chr1 (68-157)||(8169568-8169657)
chr1 (23-157)||(47013072-47013206)
chr1 (86-146)||(33599229-33599289)
chr1 (68-158)||(4854409-4854499)
chr1 (68-157)||(1444181-1444270)
chr1 (68-157)||(9120039-9120128)
chr1 (68-157)||(47011456-47011545)
chr1 (97-157)||(45044949-45045009)
chr1 (94-156)||(1442551-1442613)
chr1 (22-147)||(42134492-42134617)
chr1 (17-57)||(51122005-51122045)
[»] chr7 (46 HSPs)
chr7 (14-157)||(39859210-39859353)
chr7 (14-154)||(34776896-34777036)
chr7 (14-158)||(30940406-30940550)
chr7 (14-157)||(47386190-47386333)
chr7 (14-158)||(6602334-6602478)
chr7 (14-158)||(45359335-45359479)
chr7 (14-157)||(37115507-37115650)
chr7 (14-154)||(24228390-24228530)
chr7 (14-132)||(13168145-13168266)
chr7 (14-157)||(38474124-38474267)
chr7 (17-154)||(37796165-37796302)
chr7 (31-157)||(27666063-27666189)
chr7 (68-154)||(48227941-48228027)
chr7 (68-157)||(13169683-13169772)
chr7 (78-158)||(23904582-23904662)
chr7 (78-154)||(39857648-39857724)
chr7 (81-156)||(24226582-24226657)
chr7 (23-157)||(29996504-29996638)
chr7 (52-157)||(56330-56435)
chr7 (68-157)||(35403619-35403708)
chr7 (68-157)||(37113941-37114030)
chr7 (81-157)||(46437107-46437183)
chr7 (78-157)||(47384294-47384373)
chr7 (81-153)||(35691431-35691503)
chr7 (68-154)||(6605397-6605483)
chr7 (19-154)||(13018036-13018173)
chr7 (23-157)||(20478042-20478176)
chr7 (80-158)||(38549546-38549624)
chr7 (68-157)||(22155847-22155936)
chr7 (68-157)||(22211762-22211851)
chr7 (68-157)||(35401969-35402058)
chr7 (86-158)||(78032-78104)
chr7 (106-158)||(23906305-23906357)
chr7 (14-115)||(35693351-35693454)
chr7 (73-157)||(46439538-46439622)
chr7 (68-157)||(20479719-20479808)
chr7 (68-157)||(34774998-34775087)
chr7 (97-156)||(29994907-29994966)
chr7 (67-154)||(37791657-37791744)
chr7 (14-101)||(48852328-48852415)
chr7 (68-154)||(27664433-27664519)
chr7 (67-148)||(13039641-13039722)
chr7 (23-72)||(23906251-23906300)
chr7 (17-57)||(1546387-1546427)
chr7 (78-157)||(45361286-45361365)
chr7 (34-147)||(33038798-33038911)
[»] chr4 (34 HSPs)
chr4 (14-156)||(49523125-49523267)
chr4 (14-154)||(41761727-41761867)
chr4 (21-157)||(51011926-51012062)
chr4 (14-157)||(41781539-41781682)
chr4 (14-157)||(35404426-35404569)
chr4 (14-158)||(48813786-48813930)
chr4 (68-157)||(20493827-20493916)
chr4 (14-138)||(48646728-48646852)
chr4 (78-157)||(35401749-35401828)
chr4 (31-158)||(43519423-43519550)
chr4 (20-138)||(52868136-52868254)
chr4 (68-157)||(49524733-49524822)
chr4 (14-118)||(42980674-42980778)
chr4 (68-147)||(39345574-39345653)
chr4 (78-157)||(48645255-48645334)
chr4 (68-158)||(4173740-4173830)
chr4 (68-157)||(319273-319362)
chr4 (68-157)||(43507167-43507256)
chr4 (68-157)||(43508653-43508742)
chr4 (86-157)||(320918-320989)
chr4 (68-157)||(33264382-33264471)
chr4 (14-154)||(2693234-2693373)
chr4 (68-157)||(4169686-4169775)
chr4 (88-153)||(11254123-11254188)
chr4 (86-157)||(51013904-51013975)
chr4 (34-160)||(7149536-7149662)
chr4 (68-158)||(33266010-33266100)
chr4 (17-154)||(11601674-11601810)
chr4 (68-152)||(43521109-43521193)
chr4 (86-157)||(833223-833294)
chr4 (86-157)||(5439665-5439736)
chr4 (67-160)||(2691371-2691463)
chr4 (86-157)||(5437811-5437882)
chr4 (88-157)||(42982472-42982541)
[»] chr6 (32 HSPs)
chr6 (21-157)||(32439079-32439215)
chr6 (14-156)||(20523367-20523509)
chr6 (14-157)||(6899485-6899628)
chr6 (14-153)||(10568403-10568542)
chr6 (14-157)||(32516877-32517020)
chr6 (14-156)||(11355223-11355365)
chr6 (14-154)||(7372939-7373079)
chr6 (14-157)||(13613563-13613706)
chr6 (14-103)||(9398714-9398803)
chr6 (78-157)||(10569929-10570008)
chr6 (14-142)||(14338456-14338584)
chr6 (78-157)||(9400045-9400124)
chr6 (68-157)||(32518497-32518586)
chr6 (78-157)||(7051255-7051334)
chr6 (86-157)||(18645122-18645192)
chr6 (88-157)||(7371175-7371244)
chr6 (68-157)||(11357194-11357283)
chr6 (68-157)||(32454248-32454337)
chr6 (14-158)||(32455872-32456016)
chr6 (78-157)||(6902908-6902986)
chr6 (159-270)||(31841856-31841967)
chr6 (79-153)||(33276805-33276879)
chr6 (23-139)||(3456766-3456882)
chr6 (89-157)||(32437140-32437208)
chr6 (86-157)||(3480675-3480746)
chr6 (106-157)||(8605363-8605414)
chr6 (86-157)||(13610690-13610761)
chr6 (14-72)||(7049842-7049900)
chr6 (81-157)||(20525347-20525423)
chr6 (78-154)||(21068628-21068704)
chr6 (96-153)||(7049790-7049847)
chr6 (110-154)||(21091109-21091153)
[»] scaffold1454 (1 HSPs)
scaffold1454 (14-154)||(1266-1406)
[»] scaffold0564 (1 HSPs)
scaffold0564 (14-155)||(8264-8403)
[»] scaffold0058 (3 HSPs)
scaffold0058 (23-157)||(3294-3428)
scaffold0058 (23-157)||(4466-4600)
scaffold0058 (68-157)||(14343-14432)
[»] scaffold0345 (1 HSPs)
scaffold0345 (68-157)||(1555-1644)
[»] scaffold0081 (1 HSPs)
scaffold0081 (68-157)||(54258-54347)
[»] scaffold0002 (1 HSPs)
scaffold0002 (81-150)||(436272-436341)
[»] scaffold1712 (1 HSPs)
scaffold1712 (86-157)||(982-1053)
[»] scaffold0004 (1 HSPs)
scaffold0004 (77-154)||(106673-106748)


Alignment Details
Target: chr3 (Bit Score: 148; Significance: 5e-78; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 158 - 337
Target Start/End: Original strand, 53800054 - 53800233
Alignment:
Q  158 cttctcccacactatccacgtttattttaatagtatgtgtagaaaatctagatgccacctcctactatttattggaacaccaaaaatgcctaacctttaa 257  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |    
T  53800054 cttctcccacactatccacgtttattttaatcgtatgtgtagaaaatctagatgccacctcctactatgtattgggacaccaaaaatgcctaacctttga 53800153  T
Q  258 aactatctgtattacttcttttatttacggcaaatcatgttagcggttgattgttactcaaaccctttttccaccgtgat 337  Q
    |||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  53800154 aactatctatattgcttcttttatttacggcaaatcatgttagcagttgattgttactcaaaccctttttccactgtgat 53800233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 27899082 - 27899225
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||||||||||| |||||| ||| || ||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  27899082 catcaccactaacggagcttttggacggagggaccatttttatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatt 27899181  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  27899182 tggccgattttttaaaattcaaggacgaatttgaggtattagtc 27899225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 53190760 - 53190903
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| || ||||||||||| ||| ||||||||||||||||||||||||||  ||||||||    
T  53190760 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatt 53190859  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  53190860 tggccgattttttaaaattcaaggacgaatttgaggtattagtc 53190903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 2226153 - 2226296
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||| ||| ||||||||||||||| ||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||  ||||||||    
T  2226153 catcaccactaacagagtttttggacggagggaacattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatt 2226252  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  2226253 tggccgattttttaaaattcaaggacgaatttgaggtattagtc 2226296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 54898580 - 54898437
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    |||| ||||||||||||||||||||||||| || ||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||  ||||||||    
T  54898580 catcgtcactaacggagcttttggacggagagaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatt 54898481  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    || |||||||||||||||| ||||||||||||||||||||||||    
T  54898480 tgaccgattttttaaaattcaaggacgaatttgaggtattagtc 54898437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 15 - 157
Target Start/End: Complemental strand, 21348865 - 21348723
Alignment:
Q  15 atcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaattt 114  Q
    |||| ||||||| ||||||||||||||||||| |||||||||| || ||||||||||| ||| ||||||||||||||||||||||||||| |||||||||    
T  21348865 atcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaattt 21348766  T
Q  115 ggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||||||||||||||| |||||| |||||||||||||||||    
T  21348765 ggccgattttttaaaattcaaggacaaatttgaggtattagtc 21348723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 30599919 - 30600063
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||  || ||| ||||||| ||| ||||||||||||||||||||||||||  ||| ||||    
T  30599919 catcaccactaacagagcttttggacggagggaccattttgatcgacgtctctaaaattcagggactaaatagatatttcgcaaaattcagggacaaatt 30600018  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtcc 158  Q
    |||||||||| | ||||||||||||||||||||||||||||||||    
T  30600019 tggccgatttgtaaaaatttaaggacgaatttgaggtattagtcc 30600063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 46112630 - 46112487
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| |||||||  |||||||| ||||||||| |||||||||| || ||||||||||| | | ||||||||||||||| |||||||||||  |||||||    
T  46112630 catcaccactaacatagcttttgaacggagggaccattttgatggacgtctgtaaaattcatggactaaatagatattttgcaaaattcaataacgaatt 46112531  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  46112530 tggccgattttttaaaattcaaggacgaatttgaggtattagtc 46112487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 35905713 - 35905843
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||  ||||||||    
T  35905713 catcaccactaccggagcttttggacggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatt 35905812  T
Q  114 tggccgattttttaaaatttaaggacgaatt 144  Q
    || |||||||||||||||| ||||| |||||    
T  35905813 tgaccgattttttaaaattcaaggatgaatt 35905843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 43765280 - 43765139
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||| ||||||| |||||||||| || ||||||||||| || ||||||||||||||||||||||||||    |||||||    
T  43765280 catcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagaaactaaatagatatttcgcaaaattccggaacgaatt 43765181  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattag 155  Q
    || ||||||||| |||||| ||||||||||||||||||||||    
T  43765180 tgaccgatttttgaaaattcaaggacgaatttgaggtattag 43765139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 51684753 - 51684610
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| || ||||||||||| | | ||||||||||||||| ||||||||||  || |||||    
T  51684753 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatattttgcaaaattcagggatgaatt 51684654  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||| ||||||| |||||| ||||||||||||||| ||||||||    
T  51684653 tggctgatttttgaaaattcaaggacgaatttgagatattagtc 51684610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 41977893 - 41977750
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| || ||||| |||||||||||||||||| |||||||| | || ||||||||||| ||| ||||| | |||||||||| |||||||  |||| |||    
T  41977893 catcaccattaacgaagcttttggacggagggaccattttgacggacgtctgtaaaattcagggactaatttgatatttcgccaaattcagggacgtatt 41977794  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  41977793 tggccgattttttaaaattcaaggacgaatttgaggtattagtc 41977750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 17515453 - 17515310
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||| | |||||||| |||||| |||||||||| || | ||||||||| ||| ||||||||||||||||||||||||||  || |||||    
T  17515453 catcaccactaacggtgattttggacagagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagcgatgaatt 17515354  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| |||||| |||||| ||||| ||||||||||||||||||    
T  17515353 tggccaatttttaaaaattcaaggaagaatttgaggtattagtc 17515310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 23293171 - 23293314
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| |||||||||||||||||||||||||||  ||||||||| || | ||||||||| | | ||||||||||||||||||||||||||| | ||||||    
T  23293171 catcaccactaacggagcttttggacggagggactattttgatggacgtttgtaaaattcatggactaaatagatatttcgcaaaattcaagggcgaatt 23293270  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||| |||||||  ||||| ||| || |||||||||||||||||    
T  23293271 tggctgatttttcgaaattcaagaacaaatttgaggtattagtc 23293314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 42279650 - 42279510
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||  || ||||||||||| ||| ||||||||||||||| |||||||||  |||||||||    
T  42279650 catcaccactaacagagcttttggacggagggaccattttgatagacgtctgtaaaattcagggactaaatagatattttgcaaaattctgagacgaatt 42279551  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
      || ||||||| |||||| || ||||||||||||||||||    
T  42279550 gagctgatttttgaaaattcaatgacgaatttgaggtatta 42279510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 46197863 - 46197750
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    |||||||||||||||| |||||||||| ||||| |||||| ||| || ||||||||||| ||||||||||||||||||| |||||||||| |||||||||    
T  46197863 catcatcactaacggaacttttggacgaagggaccattttaatggacgtctgtaaaattcaggaactaaatagatattttgcaaaattcagagacgaatt 46197764  T
Q  114 tggccgatttttta 127  Q
    || |||| ||||||    
T  46197763 tgaccgagttttta 46197750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 23291649 - 23291570
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  23291649 actaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttaaggtattagtc 23291570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 157
Target Start/End: Original strand, 3152228 - 3152362
Alignment:
Q  23 taacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgatt 122  Q
    ||||||| ||||||||||||||||    ||||||| || ||||||||||| ||| ||||| | ||||||||||||||||||  || ||| ||||||||||    
T  3152228 taacggaccttttggacggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatt 3152327  T
Q  123 ttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||| ||||||||||||  |||||||||||||||||    
T  3152328 tttcaaaatttaaggataaatttgaggtattagtc 3152362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 2377172 - 2377032
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| |||||||||||||||| |||||||| | |||||||||| || ||||||||||| ||  |||||||| || ||| ||||||||||  ||||||||    
T  2377172 catcaccactaacggagcttttagacggaggaaccattttgatggacgtctgtaaaattcagagactaaatatattttttgcaaaattcagggacgaatt 2377073  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    ||| | |||||| |||||| ||  |||||||||||||||||    
T  2377072 tggtcaatttttgaaaattcaaaaacgaatttgaggtatta 2377032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 23 - 157
Target Start/End: Complemental strand, 44794341 - 44794208
Alignment:
Q  23 taacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgatt 122  Q
    ||||||| ||||||||||||||||  | ||||||| || |||| |||||| ||| ||||| | ||||||||||||||||||  || ||| |||||||| |    
T  44794341 taacggaccttttggacggagggacgaatttgatggacttctgcaaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccga-t 44794243  T
Q  123 ttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||| |||||| ||||||||||||||||||||||||    
T  44794242 tttcaaaattcaaggacgaatttgaggtattagtc 44794208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 31 - 151
Target Start/End: Complemental strand, 2660338 - 2660218
Alignment:
Q  31 cttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaa 130  Q
    ||||||||||||||||  | ||||||| || ||||||||||| | | ||||| | ||||||||||||||||||  |||||| |||| |||||||| ||||    
T  2660338 cttttggacggagggacgaatttgatggacgtctgtaaaattcaaggactaatttgatatttcgcaaaattcagggacgaaattggtcgatttttcaaaa 2660239  T
Q  131 tttaaggacgaatttgaggta 151  Q
    || ||||||||||||||||||    
T  2660238 ttcaaggacgaatttgaggta 2660218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 81 - 157
Target Start/End: Complemental strand, 44268057 - 44267981
Alignment:
Q  81 aaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||| |||||||||||||||| ||| ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  44268057 aaatagctatttcgcaaaattcagagatgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtc 44267981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 51686404 - 51686483
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||||| ||||||||||||||| |  |||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  51686404 actaaataaatatttcgcaaaatttagggacgaatttggctgatttttgaaaatttaaggacgaatttgaggtattagtc 51686483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 157
Target Start/End: Original strand, 611233 - 611311
Alignment:
Q  79 ctaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||||| ||||||| ||||||||  |||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  611233 ctaaatagctatttcgaaaaattcagggacgaatttggctgattttttaaaattcaaggacgaatttgaggtattagtc 611311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 158
Target Start/End: Original strand, 41979352 - 41979442
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtcc 158  Q
    ||||| ||| ||||| | ||||||||||||||||||  |||||| ||||||||||||| |||||| |||||||||||||||||||||||||    
T  41979352 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcc 41979442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 154
Target Start/End: Original strand, 54412547 - 54412633
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    ||||| ||||||||||||||||| ||||||||||||| |||||||||| || ||||||||||||| | ||||||||||||| |||||    
T  54412547 aaattcaggaactaaatagatatctcgcaaaattcaaggacgaatttgaccaattttttaaaattcacggacgaatttgagatatta 54412633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 38191984 - 38191895
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||||||||||||  |||||| |||||| |||||| |||||||||||||||||||||||||||||||    
T  38191984 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaggacgaatttgaggtattagtc 38191895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 38193510 - 38193599
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||||||||||||  |||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  38193510 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 38193599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 46308896 - 46308807
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||||||||||||  |||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  46308896 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 46308807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 53094273 - 53094362
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||||||||||||  |||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  53094273 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 53094362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 42282483 - 42282559
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    |||||||||||||||||||||||||| | ||||||||| | ||||||| |||||| |||||||||||||||||||||    
T  42282483 actaaatagatatttcgcaaaattcagaaacgaatttgactgatttttgaaaattcaaggacgaatttgaggtatta 42282559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 54900092 - 54900163
Alignment:
Q  86 gatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||  |||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  54900092 gatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 54900163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 2378993 - 2379071
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagt 156  Q
    ||||||||| ||||| ||||||||||  |||||| ||| |||||||||||||||| |||||||||||||||||||||||    
T  2378993 actaaatagctattttgcaaaattcagggacgaaattgaccgattttttaaaattcaaggacgaatttgaggtattagt 2379071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 3150341 - 3150252
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||||||||||||  |||||| ||| ||||||||| |||||| ||||||||||||||||||||||||    
T  3150341 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 3150252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 81 - 157
Target Start/End: Complemental strand, 30598413 - 30598337
Alignment:
Q  81 aaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||| ||||||||||||||||  ||| |||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  30598413 aaatagctatttcgcaaaattcagggacaaatttgaccgatttttgaaaattcaaggacgaatttgaggtattagtc 30598337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 46114115 - 46114195
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccga-ttttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||| |||||  ||||||||||| |||||    
T  46114115 actaaatagatatttcgcaaaattcaaggacaaatttggccgatttttttaaaattcaaggataaatttgaggtagtagtc 46114195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 53092694 - 53092623
Alignment:
Q  86 gatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||  |||||| |||||| |||||| ||||||||| |||||||||||||||||||||    
T  53092694 gatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaagacgaatttgaggtattagtc 53092623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 96 - 157
Target Start/End: Original strand, 7884927 - 7884988
Alignment:
Q  96 aaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||  |||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  7884927 aaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 7884988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 46310436 - 46310525
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||||||||||||  |||||| ||| ||||||||| |||||| || |||||||||||||||||||||    
T  46310436 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaagacgaatttgaggtattagtc 46310525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 53187831 - 53187742
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||||||||||||  |||||| ||| ||||||||| |||||| |||||| |||||||||||||||||    
T  53187831 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacaaatttgaggtattagtc 53187742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 158
Target Start/End: Complemental strand, 48829435 - 48829355
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtcc 158  Q
    ||||||||||||||||||||||||||   |  |||||||| || |||| |||||| |||||||||||||||||||||||||    
T  48829435 actaaatagatatttcgcaaaattcaggaataaatttggctgaattttgaaaattcaaggacgaatttgaggtattagtcc 48829355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 600804 - 600725
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||| | ||||||||   || ||||||| ||||||||||||||| ||||| ||||||||||||||||||    
T  600804 actaaatagatattttgtaaaattcatgaacaaatttggtcgattttttaaaattcaaggatgaatttgaggtattagtc 600725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 44795908 - 44795979
Alignment:
Q  86 gatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||   ||||| || |||||||||| |||||| ||||||||||||||||||||||||    
T  44795908 gatatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaaggacgaatttgaggtattagtc 44795979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 2661926 - 2661992
Alignment:
Q  86 gatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtat 152  Q
    ||||||||||||||||||  |||||| |||| |||||||| |||||| |||||||||||||||||||    
T  2661926 gatatttcgcaaaattcacggacgaaattggtcgatttttcaaaattcaaggacgaatttgaggtat 2661992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 7883417 - 7883328
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||||||||| | |||||||| ||||||| |  |||||| ||||||||||||| |||||| || |||||| ||||||||||||||    
T  7883417 aaattcaggaactaatttgatatttcacaaaatttagggacgaaattggccgatttttcaaaattcaaagacgaaattgaggtattagtc 7883328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 46609238 - 46609149
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | |||||||| |||||||||  |||||| ||||||||||||| |||||| ||| ||||||||||| ||||||||    
T  46609238 aaattcagggactaatttgatatttcacaaaattcagggacgaaattggccgatttttcaaaattcaagaacgaatttgagatattagtc 46609149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 46611303 - 46611392
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||||||||||||  |||||| ||| |  |||||| |||||| ||||||||||||||||||||||||    
T  46611303 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgacaaatttttcaaaattcaaggacgaatttgaggtattagtc 46611392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 48830807 - 48830896
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattca 103  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||| || || |||||||| |   |||||||||||||||||  |||||||    
T  48830807 catcaccactaacagagcttttggacggagggaccattttgatggacgtccgtaaaattcaaagactaaatagatatttcgttaaattca 48830896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 7884874 - 7884932
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaatt 72  Q
    ||||| |||||||||| |||||||||||||||| |||||||||| || |||||||||||    
T  7884874 catcaccactaacggaacttttggacggagggaccattttgatggacgtctgtaaaatt 7884932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 35903914 - 35903825
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||| ||||||||||  || ||| ||||| ||||||| |||||| |||||| |||||||||||||||||    
T  35903914 aaattcagggactaatttgatattttgcaaaattcagggatgaaattggctgatttttcaaaattcaaggacaaatttgaggtattagtc 35903825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 81 - 157
Target Start/End: Original strand, 21350618 - 21350694
Alignment:
Q  81 aaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||| ||||||||||||||||   ||||||||||||||||||  |||| | | ||| ||||||||||||||||||    
T  21350618 aaatagctatttcgcaaaattcagtaacgaatttggccgattttaaaaaaatcacggatgaatttgaggtattagtc 21350694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 17516993 - 17517052
Alignment:
Q  88 tatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttga 147  Q
    ||||||||||||||||   ||||||||| ||||||||| |||||| ||||||||||||||    
T  17516993 tatttcgcaaaattcatgaacgaatttgaccgatttttgaaaattcaaggacgaatttga 17517052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 157
Target Start/End: Complemental strand, 27897214 - 27897151
Alignment:
Q  94 gcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||  ||||||||||  | ||||||||||||||||| | ||||||||||||||||||    
T  27897214 gcaaaattcatggacgaatttgatccattttttaaaatttaagaaagaatttgaggtattagtc 27897151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 44276197 - 44276255
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaatt 72  Q
    ||||| ||||||| ||||||||||||||||||| ||||||||||  | |||||||||||    
T  44276197 catcaccactaacagagcttttggacggagggaccattttgatgggcgtctgtaaaatt 44276255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 147
Target Start/End: Complemental strand, 23774259 - 23774162
Alignment:
Q  50 ttttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttga 147  Q
    |||||||| || ||||  ||||| ||| ||||||| ||||||||||| |||| |  ||||||||||||||| |  | |||||| ||||||||||||||    
T  23774259 ttttgatggacgtctgacaaattcagggactaaattgatatttcgcataattgagggacgaatttggccgactcgtgaaaattcaaggacgaatttga 23774162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 48634012 - 48633887
Alignment:
Q  22 ctaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgat 121  Q
    ||||||||||  ||||||||||||| | |||||||| || ||||  ||||| ||| ||||| | ||||||||||| |||| |  |||||||||| ||||     
T  48634012 ctaacggagcacttggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgatggacgaatttgaccgac 48633913  T
Q  122 tttttaaaatttaaggacgaatttga 147  Q
       | |||||| ||||||||||||||    
T  48633912 ccgtgaaaattcaaggacgaatttga 48633887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 600852 - 600809
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatg 57  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||    
T  600852 catcaccactaacggagcttttagacggagggaccattttgatg 600809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 28626482 - 28626411
Alignment:
Q  86 gatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||| | ||||||  |||||| ||| ||||||||| |||||| |||||| | |||||||||||||||    
T  28626482 gatatttcgaataattcagggacgaaattgaccgatttttcaaaattcaaggactattttgaggtattagtc 28626411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 147
Target Start/End: Original strand, 2977313 - 2977443
Alignment:
Q  17 catcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttgg 116  Q
    |||| ||||||||||  |||| |||| ||| | |||||||| || | ||  ||||| ||| ||| ||| ||||||||||| |||| |  || ||||||||    
T  2977313 catcgctaacggagcacttgggcggatggacctttttgatggacgtatgacaaatttagggactgaattgatatttcgcataattaagggatgaatttgg 2977412  T
Q  117 ccgattttttaaaatttaaggacgaatttga 147  Q
    ||||||  | |||||| ||||||||||||||    
T  2977413 ccgattcgtaaaaattcaaggacgaatttga 2977443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 19987602 - 19987684
Alignment:
Q  21 actaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattca 103  Q
    |||||| || ||||||||||||||||    ||||||| || | ||||||||| ||| ||||| | ||||||||||||||||||    
T  19987602 actaacagaccttttggacggagggactgatttgatggacgtgtgtaaaatttagggactaatttgatatttcgcaaaattca 19987684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 31887441 - 31887566
Alignment:
Q  22 ctaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgat 121  Q
    ||||||||||  ||||||||||||| | |||||||  |||||||  ||||| ||| ||||| | ||||||||||| |||| |  |  ||||||| |||||    
T  31887441 ctaacggagcacttggacggagggacctttttgatagacatctgacaaattcagggactaagttgatatttcgcataattgatggttgaatttgaccgat 31887540  T
Q  122 tttttaaaatttaaggacgaatttga 147  Q
       | |||||| ||||||||||||||    
T  31887541 ccgtgaaaattcaaggacgaatttga 31887566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 128; Significance: 4e-66; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 158 - 337
Target Start/End: Complemental strand, 36672880 - 36672701
Alignment:
Q  158 cttctcccacactatccacgtttattttaatagtatgtgtagaaaatctagatgccacctcctactatttattggaacaccaaaaatgcctaacctttaa 257  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||| |||||| ||| |||||||||||||||||| |    
T  36672880 cttctcccacactatccacatttattttaattgtatgtgtagaaaacctagatgccacctcctactatgtattgggacatcaaaaatgcctaacctttga 36672781  T
Q  258 aactatctgtattacttcttttatttacggcaaatcatgttagcggttgattgttactcaaaccctttttccaccgtgat 337  Q
    |||||| | |||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||    
T  36672780 aactatatatattgcttcttttatttacggcaaatcatgttagcagttgattgttactcaaaccttttttccactgtgat 36672701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 8609788 - 8609931
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| || ||||||||||| ||| ||||||||||||||||||||||||||  ||||||||    
T  8609788 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatt 8609887  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||    
T  8609888 tggccgattttttaaaattcaagaacgaatttgaggtattagtc 8609931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 13282621 - 13282478
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| || | ||||||||| ||| ||||||||||||||||||||||||||  ||||||||    
T  13282621 catcaccactaacggagcttttggacggagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatt 13282522  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  13282521 tggccgattttttaaaattcaaggacgaatttgaggtattagtc 13282478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 38547371 - 38547228
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||| ||||||| |||||||||| || ||||||||||| ||| ||||| | ||||||||||||||||||  |||| |||    
T  38547371 catcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcatggacgtatt 38547272  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||    
T  38547271 tggccgattttttaaaattcaaggacgaacttgaggtattagtc 38547228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 42941911 - 42941777
Alignment:
Q  20 cactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccg 119  Q
    ||||||||||| |||||||||||||||  ||||||||| |||||||||||||| ||| |||||||| ||||||| |||||||||  |||||||||||| |    
T  42941911 cactaacggagattttggacggagggactattttgatggacatctgtaaaattcagggactaaataaatatttctcaaaattcagggacgaatttggctg 42941812  T
Q  120 attttttaaaatttaaggacgaatttgaggtatta 154  Q
    ||||||||||||| |||||||||||||||||||||    
T  42941811 attttttaaaattcaaggacgaatttgaggtatta 42941777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 13108337 - 13108480
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| |||||||| |||||||||||||||||| |||||||||| || ||||||||||| ||| ||||| | ||||||||||||||||||  |||| |||    
T  13108337 catcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatt 13108436  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    | ||||||||||||||||| ||||||||||||||| ||||||||    
T  13108437 tagccgattttttaaaattcaaggacgaatttgagttattagtc 13108480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 41042585 - 41042728
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| ||  |||||||||| ||| |||||||||||||||| |||||||||  ||| ||||    
T  41042585 catcaccactaacggagcttttggacggagggaccattttgatggacgcctgtaaaattcagggactaaatagatatttcacaaaattcagggacaaatt 41042684  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||||||||||||| ||||||| |||| |||||||||||    
T  41042685 tggccaattttttaaaattcaaggacggatttaaggtattagtc 41042728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 7745113 - 7745256
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||| ||||||| |||||||||| |  ||||||||||  ||| |||||||| ||||||||||||||||| |||||||||    
T  7745113 catcaccactaacggagcttttggatggagggaccattttgatggatgtctgtaaaatacagggactaaataaatatttcgcaaaattcagagacgaatt 7745212  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||| ||||||| |||||| || |||||||||||| ||||||||    
T  7745213 tggctgatttttgaaaattcaaagacgaatttgagatattagtc 7745256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 20 - 154
Target Start/End: Original strand, 26242321 - 26242455
Alignment:
Q  20 cactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccg 119  Q
    ||||||||||||||||||||||||||| |||||||||| || ||||||||||| ||  |||||||||||||||||||||||| |  |||||||||||| |    
T  26242321 cactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaatttagggacgaatttggctg 26242420  T
Q  120 attttttaaaatttaaggacgaatttgaggtatta 154  Q
    |||||| |||||| ||| ||||| |||||||||||    
T  26242421 atttttgaaaattcaagaacgaaattgaggtatta 26242455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 41825652 - 41825785
Alignment:
Q  21 actaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccga 120  Q
    |||||| |||||||||||||||| || |||||||||| || ||||||||||| ||| ||||||||||||||||||||||||||| |||||||||    ||    
T  41825652 actaacagagcttttggacggagtgaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttatttga 41825751  T
Q  121 ttttttaaaatttaaggacgaatttgaggtatta 154  Q
    ||||| |||||| |||||||||||||||||||||    
T  41825752 tttttgaaaattcaaggacgaatttgaggtatta 41825785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 157
Target Start/End: Original strand, 13486107 - 13486243
Alignment:
Q  21 actaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccga 120  Q
    ||||| ||||||||||||| |||||| |||||||||| || ||||||||||| ||| ||||||||||||||||||||||| || |||||||| || ||||    
T  13486107 actaatggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaatccagagacgaatctgaccga 13486206  T
Q  121 ttttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| |||||| ||| || |||||||||||||||||    
T  13486207 tttttaaaaattcaagcacaaatttgaggtattagtc 13486243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 5036592 - 5036446
Alignment:
Q  14 catcatcactaacggagcttt----tggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacg 109  Q
    ||||||||||||| |||||||    ||||||||| || |||||||||  || ||||||||||| | | |||||||||||||||| |||||||||  ||||    
T  5036592 catcatcactaacagagctttaatttggacggagagaccattttgatagacgtctgtaaaattcaaggactaaatagatatttcacaaaattcagggacg 5036493  T
Q  110 aatttggccgattttttaaaatttaaggacgaatttgaggtattagt 156  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||    
T  5036492 aatttgacggattttttaaaatttaaggacgaatttgaggtattagt 5036446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 22272479 - 22272332
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||| |||||||  ||||||||| || | ||||||||| ||| |||||||||||||| |||||||||||  ||||||||    
T  22272479 catcaccactaacggagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcagggacgaatt 22272380  T
Q  114 tggccga--ttttttaaaatttaaggacgaatttgaggtattagtcct 159  Q
    || | ||  |||||||||||| || |||||||||||||||||||||||    
T  22272379 tgactgattttttttaaaattcaaagacgaatttgaggtattagtcct 22272332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 13 - 160
Target Start/End: Complemental strand, 27691301 - 27691151
Alignment:
Q  13 acatcatcacta---acggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacg 109  Q
    ||||||||||||   ||||| ||||||||||||||||    ||||||| || ||||||||||| ||| ||||| | ||||||||||||||||||  ||||    
T  27691301 acatcatcactattgacggaccttttggacggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 27691202  T
Q  110 aatttggccgattttttaaaatttaaggacgaatttgaggtattagtcctt 160  Q
    || ||||||||||||| |||||| |||||||||||||||||||||||||||    
T  27691201 aaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcctt 27691151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 42943426 - 42943515
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42943426 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 42943515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 78 - 158
Target Start/End: Original strand, 34681076 - 34681156
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtcc 158  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  34681076 actaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtcc 34681156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 22273891 - 22273980
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||||||||||||| |||||||||| |||| ||||||||||||||||||||||| |||||| |||||||||||||||||    
T  22273891 aaattcagggactaaatagatattttgcaaaattcagagacaaatttggccgattttttaaaattcaaggacaaatttgaggtattagtc 22273980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 26238805 - 26238726
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  26238805 actaaatagatatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 26238726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 5038062 - 5038150
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||||||| |||||||||||||||||  ||||||||| |||||||||||||||| || |||||||||||||||||||||    
T  5038062 aaattcagggactaaatagctatttcgcaaaattcaagaacgaatttgaccgattttttaaaattcaa-gacgaatttgaggtattagtc 5038150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 114
Target Start/End: Original strand, 9673166 - 9673266
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| |||||||| ||||||| |||||||||| |||||||||| || ||||||||||| ||| | |||||||||||||| |||||||||  ||||||||    
T  9673166 catcaccactaacgaagcttttagacggagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttcacaaaattcagggacgaatt 9673265  T
Q  114 t 114  Q
    |    
T  9673266 t 9673266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 33708814 - 33708949
Alignment:
Q  23 taacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgatt 122  Q
    ||||||| ||||||||||||||||    ||||||| || | ||||||||| ||| ||||| |  |||||||||||||||||  |||||| ||| ||| ||    
T  33708814 taacggaccttttggacggagggacagatttgatggacgtttgtaaaattcagggactaatttaatatttcgcaaaattcagggacgaaattgaccg-tt 33708912  T
Q  123 ttttaaaatttaaggacgaatttgaggtattagtcct 159  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  33708913 ttttaaaattcaaggatgaatttgaggtattagtcct 33708949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 38548849 - 38548920
Alignment:
Q  86 gatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||  |||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  38548849 gatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 38548920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 41823969 - 41823890
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||||||||||| |||||| || || ||||||| |||||| |||||||||||| |||||||||||    
T  41823969 actaaatagatatttcgcaaaattcaaggacgaaattagctgatttttgaaaattcaaggacgaatttaaggtattagtc 41823890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 43262147 - 43262226
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||||||||||||||||||||| |  | ||||||| || ||||||| |||||||||||||||||||||||||||||||    
T  43262147 actaaatagatatttcgcaaaatttagggtcgaatttagctgatttttgaaaatttaaggacgaatttgaggtattagtc 43262226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 601704 - 601793
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||| ||||||||  |||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  601704 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 601793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 27692837 - 27692926
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||| ||||||||||  |||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  27692837 aaattcagggactaatttgatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 27692926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 33762713 - 33762802
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||| ||||||||  |||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  33762713 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 33762802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 35510819 - 35510908
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | |||||||| |||||||||| |||||| ||| ||||||||| |||||| ||||||||||||||||||||||||    
T  35510819 aaattcagggactaatttgatatttcacaaaattcaaggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 35510908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 40339688 - 40339770
Alignment:
Q  21 actaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattca 103  Q
    |||||||||||||||||| | ||||| |||||||||| |||||||||||||| | | |||||||||||||||| || ||||||    
T  40339688 actaacggagcttttggatgaagggaccattttgatggacatctgtaaaattcatggactaaatagatatttcacataattca 40339770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 13106893 - 13106804
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||||||||||||  || ||| ||||||||||||| |||||| |||||||||||| |||||||||||    
T  13106893 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttaaggtattagtc 13106804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 29237240 - 29237151
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||| ||||||||  |||||| ||| ||||||||| |||||| ||||||||||||||||||||||||    
T  29237240 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 29237151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 29239187 - 29239276
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||| |||||| |  |||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  29239187 aaattcagggactaatttgatatttcgaaaaatttagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 29239276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 33761158 - 33761069
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||||||||||||  |||||| ||||| ||||||| |||||| || |||||||||||||||||||||    
T  33761158 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggctgatttttcaaaattcaaagacgaatttgaggtattagtc 33761069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 35509303 - 35509214
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||||||||||||  |||||| ||| ||||||||| |||||| |||||| |||||||||||||||||    
T  35509303 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggactaatttgaggtattagtc 35509214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 13484613 - 13484545
Alignment:
Q  89 atttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||||||||||||  |||||||||||||||||||| |||||| || ||||||||||||| |||||||    
T  13484613 atttcgcaaaattcagggacgaatttggccgatttttgaaaattcaatgacgaatttgaggcattagtc 13484545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 156
Target Start/End: Complemental strand, 33707295 - 33707207
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagt 156  Q
    ||||| ||| ||||| | ||||||||| ||||||||  |||||| ||| ||||||||| |||||| |||||||||||||||||||||||    
T  33707295 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagt 33707207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 160
Target Start/End: Complemental strand, 8608327 - 8608234
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaatt-caaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtcctt 160  Q
    ||||| ||| ||||| | |||||||||||||||| ||  |||||| ||| ||||||||| |||||| |||||||||||| ||||||||||||||    
T  8608327 aaattcagggactaatttgatatttcgcaaaatttcagggacgaaattgaccgatttttcaaaattcaaggacgaatttaaggtattagtcctt 8608234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 600819 - 600759
Alignment:
Q  98 aattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtcc 158  Q
    ||||||| |||||| ||||| ||||||| |||||| |||||||||||||||||||||||||    
T  600819 aattcaaggacgaaattggctgatttttcaaaattcaaggacgaatttgaggtattagtcc 600759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 13284013 - 13284081
Alignment:
Q  86 gatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    ||||||||||||||||||  ||| || ||||||||||||| |||||| ||||||||||||| |||||||    
T  13284013 gatatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaaggacgaatttgtggtatta 13284081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 15308261 - 15308350
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||| | ||||||  |||||| ||||||||||||| |||||| |||||| | |||||||||||||||    
T  15308261 aaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 15308350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 15488630 - 15488719
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||| | ||||||  |||||| ||||||||||||| |||||| |||||| | |||||||||||||||    
T  15488630 aaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 15488719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 160
Target Start/End: Original strand, 27406935 - 27407044
Alignment:
Q  51 tttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggt 150  Q
    ||||||| || ||||||||||| ||| ||||  |  |||||||| | ||||||  |||||| |||||| |||||| |||||| |||||| | ||||||||    
T  27406935 tttgatggacgtctgtaaaattcagggactattttaatatttcgaataattcatggacgaaattggccaatttttcaaaattcaaggactattttgaggt 27407034  T
Q  151 attagtcctt 160  Q
    ||||||||||    
T  27407035 attagtcctt 27407044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 9672056 - 9671980
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    ||||||||||||||||||||||||||  ||||||||||   ||||  | |||||| |||||||||||| ||||||||    
T  9672056 actaaatagatatttcgcaaaattcatggacgaatttgattgattggtgaaaattcaaggacgaatttaaggtatta 9671980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 81 - 157
Target Start/End: Complemental strand, 41040796 - 41040720
Alignment:
Q  81 aaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||| ||||| | |||||||| | |||||||| |||||||||| |||||| || ||| |||||||||||||||||    
T  41040796 aaatagctattttggaaaattcagaaacgaatttagccgatttttaaaaattcaaagacaaatttgaggtattagtc 41040720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 29694316 - 29694391
Alignment:
Q  67 aaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaa 142  Q
    |||||| | ||||||||||||||||| |||||| | ||||| |||||| ||  |||||| ||||||||||||||||    
T  29694316 aaaatttaagaactaaatagatattttgcaaaaattaaagatgaatttagcttatttttgaaaatttaaggacgaa 29694391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 27404281 - 27404213
Alignment:
Q  86 gatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    ||||||||| | ||||||  |||||| ||||||||||||| |||||| |||||| | ||||||||||||    
T  27404281 gatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtatta 27404213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 33750368 - 33750472
Alignment:
Q  17 catcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttgg 116  Q
    |||| ||||| ||||  ||||||||||||| | ||||||||||  ||||  ||||| ||| ||||| | ||||||||||| |||| |  |||||| ||||    
T  33750368 catcgctaacagagcacttggacggagggacctttttgatgaatgtctgacaaattcagggactaagttgatatttcgcataattgagggacgaagttgg 33750467  T
Q  117 ccgat 121  Q
    |||||    
T  33750468 ccgat 33750472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 2e-55; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 7267986 - 7267841
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||||||||||||||||||||||  ||||||||    
T  7267986 catcaccactaacggagcttttggacggagggatcattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagtgacgaatt 7267887  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtcct 159  Q
    ||| ||||||||||||||| ||||||||||||||||||||||||||    
T  7267886 tggacgattttttaaaattcaaggacgaatttgaggtattagtcct 7267841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 17574461 - 17574318
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| || ||||||||||| ||| ||||||||||||||||||||||||||  ||||||||    
T  17574461 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatt 17574362  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  17574361 tggccgattttttaaaattcaaggacgaatttgaggtattagtc 17574318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 36057594 - 36057738
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| || |||||||||||||||||||||||| |||||||||| || ||||||||||| |||  |||||||||||||||||||||||||  ||||||||    
T  36057594 catcaccattaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggtctaaatagatatttcgcaaaattcagggacgaatt 36057693  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtcc 158  Q
    |||||||||||| |||||| |||||||||||||||||||||||||    
T  36057694 tggccgatttttgaaaattcaaggacgaatttgaggtattagtcc 36057738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 30468261 - 30468405
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| || ||||||||||| | | |||||||||||||||||||||||| | |||||||||    
T  30468261 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattgagagacgaatt 30468360  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtcc 158  Q
    || || ||||||||||||| ||||||||| ||||||||| |||||    
T  30468361 tgaccaattttttaaaattcaaggacgaaattgaggtatcagtcc 30468405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 34327778 - 34327635
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||| |||||||||||||||| || |||||||||| || ||||||||||| ||| ||||||||||||||||||||||||||  ||||||||    
T  34327778 catcaccactaacagagcttttggacggagagaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagcgacgaatt 34327679  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| |||||  |||||| ||||||||||||||||||||||||    
T  34327678 tggccaattttagaaaattcaaggacgaatttgaggtattagtc 34327635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 2179930 - 2179787
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| |||||| |||||||||||||||||||| |||||||||| |  ||||||||||| ||| | |||||||||||||| |||||||||  ||||||||    
T  2179930 catcaccactaatggagcttttggacggagggaccattttgatggatgtctgtaaaattcagggattaaatagatatttcacaaaattcagggacgaatt 2179831  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    || |||||||||||||||| |||||| |||||||||||||||||    
T  2179830 tgaccgattttttaaaattcaaggacaaatttgaggtattagtc 2179787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 8539818 - 8539675
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||| |||| ||  ||||||||| || | ||||||||| ||| |||||||||||||||||||||||||||  |||||||    
T  8539818 catcaacactaacggagcttttggatggagcgactattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcaagaacgaatt 8539719  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||   ||||||| |||||| ||||||||||||||||||||||||    
T  8539718 tgattgatttttcaaaattcaaggacgaatttgaggtattagtc 8539675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 8541281 - 8541363
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtcctt 160  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  8541281 actaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaatgacgaatttgaggtattagtcctt 8541363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 12738736 - 12738825
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12738736 aaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 12738825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 12801559 - 12801648
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12801559 aaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 12801648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 30463989 - 30463900
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||||||||||||||||||||||||  |||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  30463989 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 30463900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 31 - 157
Target Start/End: Original strand, 24541209 - 24541336
Alignment:
Q  31 cttttggacggagg-gatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaa 129  Q
    |||||||||||||| ||| | ||||||| || ||||||||||| ||| ||||| | ||||||||||||||||||  |||||| ||||||||||||| |||    
T  24541209 cttttggacggaggagatgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaa 24541308  T
Q  130 atttaaggacgaatttgaggtattagtc 157  Q
    ||| || |||||||||||||||||||||    
T  24541309 attcaatgacgaatttgaggtattagtc 24541336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 18624996 - 18625129
Alignment:
Q  21 actaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccga 120  Q
    |||||||||||||||||||||| ||| |||||||||| ||   ||||||||| ||| |||||||||||||||| |||||||||  ||||||||| || ||    
T  18624996 actaacggagcttttggacggaaggaccattttgatggacgagtgtaaaattcagggactaaatagatatttcacaaaattcagggacgaatttagctga 18625095  T
Q  121 ttttttaaaatttaaggacgaatttgaggtatta 154  Q
    |   | |||||| |||||||||||||||||||||    
T  18625096 tcagtgaaaattcaaggacgaatttgaggtatta 18625129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 2852975 - 2852886
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||||||||| | ||||||||||||||||||  |||||| ||| |||||||||||||||| ||||||||||||||||||||||||    
T  2852975 aaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgattttttaaaattcaaggacgaatttgaggtattagtc 2852886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 28813765 - 28813856
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccga--ttttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||||||||||||||||||||||||| ||||||||||||| |  |||||| ||||| ||||||||||||||||||||||||    
T  28813765 aaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccaatttttttttaaattcaaggacgaatttgaggtattagtc 28813856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 31 - 157
Target Start/End: Original strand, 2854325 - 2854450
Alignment:
Q  31 cttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaa 130  Q
    ||||||||||||||||  | |||| || || ||||||||||| ||| ||||| | ||| ||||| ||||||||  |||||| ||| ||||||||| ||||    
T  2854325 cttttggacggagggacgaatttgttggacgtctgtaaaattcagggactaatttgat-tttcgaaaaattcagggacgaaattgaccgatttttcaaaa 2854423  T
Q  131 tttaaggacgaatttgaggtattagtc 157  Q
    || ||||||||||||||||||||||||    
T  2854424 ttcaaggacgaatttgaggtattagtc 2854450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 7269446 - 7269535
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||||||||||||  |||||| || ||||||||||||||||| || |||||||||||||||||||||    
T  7269446 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgattttttaaaattcaaagacgaatttgaggtattagtc 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 32134320 - 32134231
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| |||||||||||||||  ||||||||||||||||||||||  ||||||| |||||| || ||| |||||||||||||||||    
T  32134320 aaattcagggactaaatagatattttacaaaattcaaagacgaatttggttgatttttgaaaattcaatgacaaatttgaggtattagtc 32134231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 81 - 157
Target Start/End: Original strand, 34328840 - 34328916
Alignment:
Q  81 aaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||| ||||| ||||||||||  |||||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  34328840 aaatagctattttgcaaaattcatggacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtattagtc 34328916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 23 - 157
Target Start/End: Original strand, 29621771 - 29621905
Alignment:
Q  23 taacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgatt 122  Q
    |||||||  |||||||||||||||    ||||||| || |||| |||||| ||| ||||| | ||||||||| ||||||||  |||||| ||||||||||    
T  29621771 taacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatt 29621870  T
Q  123 ttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||| |||||| || ||| | |||||||||||||||    
T  29621871 tttcaaaattcaatgactattttgaggtattagtc 29621905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 21842992 - 21843081
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||||||||||||  ||| || ||| ||||||||| |||||| ||||||||||||||||||||||||    
T  21842992 aaattcagggactaatttgatatttcgcaaaattcatggacaaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 21843081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 160
Target Start/End: Original strand, 42473625 - 42473734
Alignment:
Q  51 tttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggt 150  Q
    ||||||| || ||||||||||| ||| ||||  | ||||||||| | ||||||  |||||| ||||||||||||| |||||| |||||| | ||||||||    
T  42473625 tttgatggacgtctgtaaaattcagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggt 42473724  T
Q  151 attagtcctt 160  Q
    ||||||||||    
T  42473725 attagtcctt 42473734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 43492131 - 43492212
Alignment:
Q  66 taaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttga 147  Q
    ||||||| ||| ||||||||||||||||||||||||||  || ||| ||||| ||||||| |||||||||| ||||||||||    
T  43492131 taaaattcagggactaaatagatatttcgcaaaattcagggatgaacttggctgatttttgaaaatttaagtacgaatttga 43492212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 41493923 - 41493847
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    |||||||||||||||| |||||||  | |||||||||||| ||||||| |||||| ||||||||| |||||||||||    
T  41493923 actaaatagatatttcacaaaatttgaggacgaatttggctgatttttgaaaattcaaggacgaagttgaggtatta 41493847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 89 - 154
Target Start/End: Original strand, 28822111 - 28822176
Alignment:
Q  89 atttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    |||||||||||||||  |||||||||| || |||||| |||||| |||||||||||||||||||||    
T  28822111 atttcgcaaaattcagggacgaatttgacctatttttaaaaattcaaggacgaatttgaggtatta 28822176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 184 - 270
Target Start/End: Original strand, 32891659 - 32891747
Alignment:
Q  184 ttaatagtatgtgtagaaaatctagatgccacctcctacta--tttattggaacaccaaaaatgcctaacctttaaaactatctgtatt 270  Q
    ||||| || ||||||||||||||||||||||||||||||||  | |||||| | | |||||||||| ||| ||||||||||||| ||||    
T  32891659 ttaattgtttgtgtagaaaatctagatgccacctcctactatgtgtattgggaaaacaaaaatgcccaacttttaaaactatctatatt 32891747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 40782211 - 40782300
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||| ||||||||  |||||| ||||||||||||| |||||| |||||| | |||||||||||||||    
T  40782211 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 40782300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 155
Target Start/End: Original strand, 17577943 - 17578022
Alignment:
Q  76 gaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattag 155  Q
    ||||||| | ||||||| ||||||||||  || ||| | ||||||||||| |||||| ||||||||||||||||||||||    
T  17577943 gaactaatttgatattttgcaaaattcagggaagaaatgggccgatttttcaaaattcaaggacgaatttgaggtattag 17578022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 29620209 - 29620138
Alignment:
Q  86 gatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||| ||||||||  |||||| ||||||||||||| |||||| |||||| | |||||||||||||||    
T  29620209 gatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 29620138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 154
Target Start/End: Complemental strand, 40780684 - 40780553
Alignment:
Q  23 taacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgatt 122  Q
    |||||||  |||||||||||||||    ||||||| || | || |||||| ||| ||||| | ||||||||| ||||||||  |||||| ||| ||||||    
T  40780684 taacggacattttggacggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgtccgatt 40780585  T
Q  123 ttttaaaatttaaggacgaatttgaggtatta 154  Q
    ||| |||||| |||||| | ||||||||||||    
T  40780584 tttcaaaattcaaggactattttgaggtatta 40780553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 28819430 - 28819391
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcatttt 53  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  28819430 catcatcactaacggagcttttggacggagggaccatttt 28819391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 42471619 - 42471548
Alignment:
Q  86 gatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||| | ||||||  |||||| ||||||||||||| |||||| |||||| | |||||||||||||||    
T  42471619 gatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 42471548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 120
Target Start/End: Complemental strand, 35395456 - 35395370
Alignment:
Q  34 ttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccga 120  Q
    ||||||||||||| | |||||||| || |||   ||||| ||||||||||| ||||||||||| |||| |  |||||| ||||||||    
T  35395456 ttggacggagggacctttttgatggacgtctaacaaattcaggaactaaattgatatttcgcataattgagggacgaagttggccga 35395370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 2e-49; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 39664749 - 39664892
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| || ||||||||||| ||| ||||||||||||||||| |||||||   ||||||||    
T  39664749 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgtaaaattcggggacgaatt 39664848  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  39664849 tggccgattttttaaaattcaaggacgaatttgaggtattagtc 39664892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 44709746 - 44709889
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| |||||||| |||||||||||||||||| |||||||||| || ||||||||||| ||| ||||||||| ||||||||||||||||  | ||||||    
T  44709746 catcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagttatttcgcaaaattcagggccgaatt 44709845  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  44709846 tggccggttttttaaaattcaaggacgaatttgaggtattagtc 44709889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 16763213 - 16763076
Alignment:
Q  20 cactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccg 119  Q
    ||||||| ||| ||||||||||||||| |||||||||| || ||||||||||| ||| ||||||||||||||||||||||||||  |||||||||| |||    
T  16763213 cactaacagagattttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccg 16763114  T
Q  120 attttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  16763113 atttttaaaaattcaaggacgaatttgaggtattagtc 16763076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 19908247 - 19908391
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||||||||||| |||||||| | || ||||||||||| | | ||||||||||||||||||||||||||  ||| ||||    
T  19908247 catcaccactaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaatt 19908346  T
Q  114 tggccga-ttttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  19908347 tggccgatttttttaaaattcaaggacgaatttgaggtattagtc 19908391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 2767077 - 2766934
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| |||||||||||||||||||| |||||| |||||||||  || ||||||||||| ||| ||||||||||||||||||||||||||| ||||| ||    
T  2767077 catcaccactaacggagcttttggacagagggaccattttgatagacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgagtt 2766978  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    || ||||||||| |||||| ||||||||||||||| ||||||||    
T  2766977 tgaccgatttttaaaaattcaaggacgaatttgagctattagtc 2766934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 21 - 157
Target Start/End: Original strand, 14389092 - 14389228
Alignment:
Q  21 actaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccga 120  Q
    ||||||| | |||||||||||||||| |||||||||| |||| || |||||| ||| ||||||||||||||||||||||||||  |||||||||||||||    
T  14389092 actaacgaaacttttggacggagggaccattttgatggacatttggaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccga 14389191  T
Q  121 ttttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| |||||| || |||||||||||||||||||||    
T  14389192 tttttgaaaattcaatgacgaatttgaggtattagtc 14389228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 40560366 - 40560223
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||| || ||||||||||||||||  ||||||||| || ||||||||||| ||| ||||||||||||||||||||||||||  ||||||||    
T  40560366 catcaccactaacagaacttttggacggagggactattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatt 40560267  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||| |||||||||||||| || ||||||||||| |||||||||    
T  40560266 tggctgattttttaaaattcaaagacgaatttgaagtattagtc 40560223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 17696349 - 17696209
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| |||||||||||||||||||||||| || |||||||||  || | ||||||||| ||| |||||||||||||||  |||||||||  || |||||    
T  17696349 catcaccactaacggagcttttggacggagtgaccattttgattgacgtttgtaaaattcagggactaaatagatattttccaaaattcagggatgaatt 17696250  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  17696249 tggccgatttttgaaaattcaaggacgaatttgaggtatta 17696209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 42519206 - 42519346
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgc-aaaattcaaagacgaat 112  Q
    ||||| ||||||||||||||||||| ||||||| |||||||||| || ||||||||||| ||| ||||||||||||||| || ||||||||| ||| |||    
T  42519206 catcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaaattcaaggactaat 42519305  T
Q  113 ttggccgattttttaaaatttaaggacgaatttgaggtatt 153  Q
    |||  | ||||||||||||| ||||||||||||||||||||    
T  42519306 ttgatcaattttttaaaattcaaggacgaatttgaggtatt 42519346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 23 - 158
Target Start/End: Complemental strand, 6797641 - 6797506
Alignment:
Q  23 taacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgatt 122  Q
    |||| ||||||||||||||||| | |||||||||  || ||||||||||| ||| ||||||||||||||||||||||||||   |||||||| ||| |||    
T  6797641 taacagagcttttggacggaggaaccattttgatagacgtctgtaaaattaagggactaaatagatatttcgcaaaattcaggaacgaatttagccaatt 6797542  T
Q  123 ttttaaaatttaaggacgaatttgaggtattagtcc 158  Q
    |||||||||| ||  | |||||| ||||||||||||    
T  6797541 ttttaaaattcaaatatgaatttaaggtattagtcc 6797506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 39455306 - 39455169
Alignment:
Q  20 cactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagac-gaatttggcc 118  Q
    ||||||||||||||||| |||||| || |||||||||| || ||||||||||| | | ||||||||||||||| ||||||||| | ||| ||||||  ||    
T  39455306 cactaacggagcttttgaacggagagaccattttgatggacgtctgtaaaattcatggactaaatagatattttgcaaaattc-aggactgaatttaacc 39455208  T
Q  119 gattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||||||||||| |||||| |||||||| ||||||||    
T  39455207 gattttttaaaattcaaggacaaatttgagatattagtc 39455169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 19581493 - 19581414
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||||||||||  ||| |||||||| ||||||| |||||||||||||||||||||||||||||||    
T  19581493 actaaatagatatttcgcaaaattcagggacaaatttggctgatttttaaaaatttaaggacgaatttgaggtattagtc 19581414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 19906761 - 19906685
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    ||||||||||||||||||||||||||  |||||||||| |||||||||||||||| |||||||||||| ||||||||    
T  19906761 actaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttaaggtatta 19906685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 37645630 - 37645490
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    |||||||| |||| |||||| ||||||||||||  |||||||| |||||||| |||||| | | ||||||||||||||||  |||||| || ||||||||    
T  37645630 catcatcaataacagagcttatggacggagggacaattttgataaacatctgcaaaattcaaggactaaatagatatttcctaaaatttaaggacgaatt 37645531  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
     | | ||||||| |||||| ||||||||| ||| |||||||    
T  37645530 cgactgatttttaaaaattcaaggacgaagttggggtatta 37645490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 16377198 - 16377305
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| || | ||||||||| | | ||||||||||||||| ||||||||||  ||| ||||    
T  16377198 catcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaggactaaatagatattttgcaaaattcagggacaaatt 16377297  T
Q  114 tggccgat 121  Q
    || |||||    
T  16377298 tgaccgat 16377305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 16376825 - 16376736
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||||||| ||||||| ||||||||  |||||||||| |||||||||||||||| || |||||||||||||||||||||    
T  16376825 aaattcagggactaaatagctatttcgtaaaattcagggacgaatttgaccgattttttaaaattcaaagacgaatttgaggtattagtc 16376736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 68 - 158
Target Start/End: Complemental strand, 39663243 - 39663153
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtcc 158  Q
    ||||| ||| ||||||||| ||||| ||||||||||  |||||||||| ||||||||| |||||| |||||||||||| ||||||||||||    
T  39663243 aaattcagggactaaatagctattttgcaaaattcagggacgaatttgaccgatttttaaaaattcaaggacgaattttaggtattagtcc 39663153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 14387438 - 14387349
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||| ||||||||  |||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  14387438 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 14387349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 16764611 - 16764700
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||||||||||||  |||||| ||||||||||| | |||||| ||||||||||||||||||||||||    
T  16764611 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttctcaaaattcaaggacgaatttgaggtattagtc 16764700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 158
Target Start/End: Complemental strand, 34400390 - 34400313
Alignment:
Q  81 aaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtcc 158  Q
    |||||| ||||||||||||||||  || ||||||||||||||||| |||||| ||||| |||||||||||||||||||    
T  34400390 aaatagctatttcgcaaaattcagggatgaatttggccgatttttgaaaattcaaggatgaatttgaggtattagtcc 34400313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 157
Target Start/End: Original strand, 24208061 - 24208186
Alignment:
Q  32 ttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaat 131  Q
    |||||||||||||||    ||||||| || ||||||||||| ||| ||||| | ||||||||| | ||||||  |||||| ||||||||||||| |||||    
T  24208061 ttttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaat 24208160  T
Q  132 ttaaggacgaatttgaggtattagtc 157  Q
    | |||||  | |||||||||||||||    
T  24208161 tcaaggagtattttgaggtattagtc 24208186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 40561898 - 40561967
Alignment:
Q  88 tatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||| ||||||||| ||||||| ||||||||||||| |||||| || |||||||||||||||||||||    
T  40561898 tatttcacaaaattcagagacgaaattggccgatttttcaaaattcaaagacgaatttgaggtattagtc 40561967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 160
Target Start/End: Complemental strand, 24205687 - 24205595
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtcctt 160  Q
    ||||| ||| ||||| | ||||||||| ||||||||  |||||| ||||||||||||| |||||| |||||| | ||||||||||||||||||    
T  24205687 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtcctt 24205595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 157
Target Start/End: Complemental strand, 37020642 - 37020508
Alignment:
Q  23 taacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgatt 122  Q
    |||||||  |||||||||||||||    ||||||| || |||| |||||| ||| ||||| | ||||||||  ||||||||| ||| || ||| ||||||    
T  37020642 taacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcaaaaaattcaaggacaaaattgaccgatt 37020543  T
Q  123 ttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||| |||||| |||||| | |||||||||||||||    
T  37020542 tttcaaaattcaaggactattttgaggtattagtc 37020508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 32 - 157
Target Start/End: Original strand, 6786000 - 6786125
Alignment:
Q  32 ttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaat 131  Q
    |||||||||||||||    ||||||| || ||||||||||| ||| ||||| | ||||||||  | |||| |  |||||| ||||||||||||| |||||    
T  6786000 ttttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattaagggacgaaattggccgatttttcaaaat 6786099  T
Q  132 ttaaggacgaatttgaggtattagtc 157  Q
    | |||||| | |||||||||||||||    
T  6786100 tcaaggactattttgaggtattagtc 6786125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 6799421 - 6799494
Alignment:
Q  81 aaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    |||||| ||||| ||||||||||  |||||||||| ||||||||| |||||| ||||||||||||||| |||||    
T  6799421 aaatagctatttggcaaaattcatggacgaatttgtccgatttttaaaaattcaaggacgaatttgagatatta 6799494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 39456780 - 39456869
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||||||| ||||| ||||||||||  |||||||||  || ||||||||||||| ||||| |||||||| |||||||||    
T  39456780 aaattcagggactaaatagctattttgcaaaattcatggacgaatttaaccaattttttaaaattcaaggatgaatttgaagtattagtc 39456869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 110
Target Start/End: Complemental strand, 17946234 - 17946141
Alignment:
Q  17 catcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacga 110  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||  |  ||||| ||| || |||| ||||||| |||||||| || |||||    
T  17946234 catcactaacggaccttttggacggagggaccattttgatggacatgagagaaattcagggacaaaattgatattttgcaaaatttaaggacga 17946141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 37022185 - 37022274
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||| ||||||||  |||||| |||| |||||||| |||||| |||||| | |||||||||||||||    
T  37022185 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggtcgatttttcaaaattcaaggactattttgaggtattagtc 37022274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 7744183 - 7744099
Alignment:
Q  17 catcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaatt 101  Q
    ||||||||||||| |||||||| ||||||| |||||||||| ||||  |  ||||| ||| || |||| ||||||||||||||||    
T  7744183 catcactaacggaccttttggatggagggaccattttgatggacatgagagaaattcagggacgaaattgatatttcgcaaaatt 7744099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 42517602 - 42517558
Alignment:
Q  113 ttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||    
T  42517602 ttggccgatttttaaaaattcaaggacgaatttgaggtattagtc 42517558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 2577480 - 2577569
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||  ||||||||  |||||| |||| |||||||| |||||| |||||| | |||||||||||||||    
T  2577480 aaattcagggactaatttgatatttcaaaaaattcagggacgaaattggacgatttttcaaaattcaaggactattttgaggtattagtc 2577569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 6783453 - 6783364
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||| | | ||||||  |||||| ||| |||||||||||||||| |||||| | |||||||||||||||    
T  6783453 aaattcagggactaatttgatattttgaataattcagggacgaaattgaccgattttttaaaattcaaggactattttgaggtattagtc 6783364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 154
Target Start/End: Original strand, 31475079 - 31475166
Alignment:
Q  67 aaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    |||||| ||| | |||||||||||||| |||||||    |||||||||| | ||||||| |||||| ||| ||||| |||||||||||    
T  31475079 aaaattcagggattaaatagatatttctcaaaatttggtgacgaatttgactgatttttgaaaattaaagaacgaagttgaggtatta 31475166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 154
Target Start/End: Original strand, 37646477 - 37646564
Alignment:
Q  67 aaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    |||||| ||| ||||||||||||||||||| ||||  | |||||||||| | ||||||| ||| || ||| ||||| ||| |||||||    
T  37646477 aaaattcagggactaaatagatatttcgcagaatttgaggacgaatttgactgatttttgaaagttcaagaacgaagttggggtatta 37646564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 2e-49; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 34778119 - 34778262
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||| ||||| | ||||||||||||||||||  |||| |||    
T  34778119 catcaccactaacggagcttttggacggagggaccattttgatggacatctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatt 34778218  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  34778219 tggccgattttttaaaattcaaggacgaatttgaggtattagtc 34778262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 2869722 - 2869579
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||| || ||||||||||| ||  ||||||||||||||||||||||||||  ||||||||    
T  2869722 catcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaatttagagactaaatagatatttcgcaaaattcagggacgaatt 2869623  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    || ||||||||| |||||| ||||||||||||||||||||||||    
T  2869622 tgaccgatttttgaaaattcaaggacgaatttgaggtattagtc 2869579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 4855947 - 4856090
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| || |||||||||||||||||||||||| |||||||||| || ||||||||||| ||| ||||| | ||||||||||||||||||  |||| |||    
T  4855947 catcaccattaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatt 4856046  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  4856047 tggccgattttttaaaattcaaggacgaatttgaggtattagtc 4856090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 6818659 - 6818802
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| || ||||||||||| ||| ||||||||||||||| || |||| ||  ||||| ||    
T  6818659 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgctaaatccagggacgagtt 6818758  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  6818759 tggccgattttttaaaattcaaggacgaatttgaggtattagtc 6818802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 25278349 - 25278492
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| || | ||||||||| | | ||||||||| ||||||||||||||||  ||||||||    
T  25278349 catcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaggactaaataggtatttcgcaaaattcagggacgaatt 25278448  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    || |||||||||||||||| ||||||||||||||||||||||||    
T  25278449 tgaccgattttttaaaattcaaggacgaatttgaggtattagtc 25278492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 27087426 - 27087283
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||||||| ||  |||||||||| || | ||||||||| ||| ||||||||||||||||||||||||||  ||| ||||    
T  27087426 catcaccactaacggagcttttggacggatgggccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggacaaatt 27087327  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    || |||||||||||||||||||||||||||||||||||||||||    
T  27087326 tgaccgattttttaaaatttaaggacgaatttgaggtattagtc 27087283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 31238476 - 31238619
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| |||||||||||||||||||| || ||| |||||||||| || ||||||||||| ||| ||||||||||||||||||||||||||  ||| ||||    
T  31238476 catcaccactaacggagcttttggacagatggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacaaatt 31238575  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||| |||||| |||||||||||||||||    
T  31238576 tggccgattttttaaaattcaaggacaaatttgaggtattagtc 31238619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 50556078 - 50556221
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||||||||||| |||||||||  || ||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  50556078 catcaccactaacggagcttttggacggagggaccattttgatagacgtctgtaaaatttagggactaaatagatatttcgcaaaattcagagacgaatt 50556177  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    || | |||||||||||||| || |||||||||||| ||||||||    
T  50556178 tgactgattttttaaaattcaaagacgaatttgagatattagtc 50556221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 160
Target Start/End: Complemental strand, 37344485 - 37344339
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| || | ||||||||| |   ||||||||| ||||||||||||||||  ||||||||    
T  37344485 catcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaagactaaataggtatttcgcaaaattcagggacgaatt 37344386  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtcctt 160  Q
    || |||||||||||||||| |||||||||||||||||||||||||||    
T  37344385 tgaccgattttttaaaattcaaggacgaatttgaggtattagtcctt 37344339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 51896133 - 51896276
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||| |||||||||||||||||||  ||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||  ||| ||||    
T  51896133 catcaccactaacagagcttttggacggagggactattttgatggacatctgtaaaattcagggactaaatagatatttcgcaaaattcagggacaaatt 51896232  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    || | |||||||||||||||||||||| ||||||||||| ||||    
T  51896233 tgactgattttttaaaatttaaggacggatttgaggtatcagtc 51896276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 3013451 - 3013600
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacat------ctgtaaaattgaggaactaaatagatatttcgcaaaattcaaaga 107  Q
    ||||| |||||||||||||||||||||||||||  |||||||||  |||      |||||||||| ||| ||||||||||||||||||||||||||  ||    
T  3013451 catcaccactaacggagcttttggacggagggactattttgatgtccatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcatgga 3013550  T
Q  108 cgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||||| | ||| |||||||||| ||||||||||||||||||||||||    
T  3013551 cgaatttgactgatgttttaaaattcaaggacgaatttgaggtattagtc 3013600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 46583537 - 46583680
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| || ||||||| ||||||||||||||||  | ||||||| || ||||||||||| ||| ||||| | ||||||||||||||||||  ||| || |    
T  46583537 catcaccattaacggaccttttggacggagggacaaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacaaaat 46583636  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    || ||||||||| |||||| ||||||||||||||||||||||||    
T  46583637 tgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 46583680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 31236908 - 31236819
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||||||||||||||||||||||||||||||  ||| |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  31236908 aaattcaggaactaaatagatatttcgcaaaattcagggacaaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 31236819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 33602625 - 33602765
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    |||||| ||||||||| ||||||||||||||||  | ||||| | || ||||||||||| ||| ||||| | |||||||| |||||||||  |||||| |    
T  33602625 catcattactaacggaccttttggacggagggactaatttgacggacgtctgtaaaattcagggactaatttgatatttcacaaaattcagggacgaaat 33602724  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    || ||||||||| |||||| |||||||||||||||||||||    
T  33602725 tgaccgatttttcaaaattcaaggacgaatttgaggtatta 33602765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 15104584 - 15104481
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| |||||| |||||||||||||||| ||| |||||||||| || ||||||||||| ||| ||||||||||||||||||||||||||   |||||||    
T  15104584 catcaccactaatggagcttttggacggaaggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggaacgaatt 15104485  T
Q  114 tggc 117  Q
    ||||    
T  15104484 tggc 15104481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 62 - 157
Target Start/End: Original strand, 25278982 - 25279077
Alignment:
Q  62 tctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||| ||| |||||||||||||||||||||||| |   ||||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  25278982 tctgtaaaattcagggactaaatagatatttcgcaaaatttaggaacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 25279077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 52641994 - 52641888
Alignment:
Q  51 tttgatgaacatct-gtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgagg 149  Q
    |||||||||||| | ||||| ||||||| ||||||| |||||||||||||||||  |||||||||||| ||||||| |||||| ||||||||||||||||    
T  52641994 tttgatgaacattttgtaaatttgagga-ctaaatatatatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaaggacgaatttgagg 52641896  T
Q  150 tattagtc 157  Q
    ||||||||    
T  52641895 tattagtc 52641888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 3011934 - 3011858
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    ||||||||||||||||||||||||||   ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  3011934 actaaatagatatttcgcaaaattcaggaacgaatttgactgattttttaaaatttaaggacgaatttgaggtatta 3011858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 68 - 156
Target Start/End: Complemental strand, 50554252 - 50554164
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagt 156  Q
    ||||| ||||||||||||| |||||  |||||||||  |||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  50554252 aaattcaggaactaaatagctattttacaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagt 50554164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 8168013 - 8167942
Alignment:
Q  86 gatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||||||||||||||| ||||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  8168013 gatatttcgcaaaattcagagacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 8167942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 25276831 - 25276742
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||||||||||||| || ||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  25276831 aaattcagggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 25276742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 157
Target Start/End: Original strand, 37088149 - 37088225
Alignment:
Q  81 aaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||| ||||||||||||||||   |||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  37088149 aaatagctatttcgcaaaattcaggaacgaatttggccgattttttaaaattcaaggaagaatttgaggtattagtc 37088225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 154
Target Start/End: Original strand, 52643648 - 52643736
Alignment:
Q  66 taaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    ||||||| ||| |||||||| |||||||||||||||||  |||||||||  | ||||||| ||||||||||||||||||||||||||||    
T  52643648 taaaattcagggactaaataaatatttcgcaaaattcagggacgaatttaactgatttttaaaaatttaaggacgaatttgaggtatta 52643736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 26223676 - 26223587
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||||||||||||  |||||| ||| ||||||||| |||||| ||||||||||||||||||||||||    
T  26223676 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 26223587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 34776658 - 34776569
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||| ||||||||  |||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  34776658 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 34776569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 46582099 - 46582010
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||||||||||||  |||||| ||||||||||||| |||||| |||||| |||||||||||||||||    
T  46582099 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacaaatttgaggtattagtc 46582010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 81 - 157
Target Start/End: Original strand, 2871089 - 2871165
Alignment:
Q  81 aaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||| ||||||||||||||||  ||||||||| |||||||||| |||||| ||||||||||||||| ||||||||    
T  2871089 aaatagctatttcgcaaaattcagggacgaatttagccgatttttaaaaattcaaggacgaatttgagatattagtc 2871165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 156
Target Start/End: Complemental strand, 6816933 - 6816866
Alignment:
Q  89 atttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagt 156  Q
    |||| ||||||||||  |||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  6816933 attttgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagt 6816866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 25278933 - 25278854
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||||||||||  ||| |||||| | ||||||| |||||| ||||| ||||||||||||||||||    
T  25278933 actaaatagatatttcgcaaaattcagggacaaatttgactgatttttgaaaattcaaggatgaatttgaggtattagtc 25278854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 27089297 - 27089368
Alignment:
Q  86 gatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||||| |||||||||| |||||| || |||||||||| |||||| ||||||||||||||||||||||||    
T  27089297 gatatttcacaaaattcaaggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 27089368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 159
Target Start/End: Original strand, 37345962 - 37346053
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtcct 159  Q
    ||||| ||| ||||| | ||||||||||||||||||  || ||| |||| |||||||| |||||| ||||||||||||||||||||||||||    
T  37345962 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggtcgatttttcaaaattcaaggacgaatttgaggtattagtcct 37346053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 23 - 157
Target Start/End: Original strand, 9121658 - 9121792
Alignment:
Q  23 taacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgatt 122  Q
    |||||||  |||||||||||||||    ||||||| || |||| |||||| ||| ||||| | ||||||||| |||||| |  |||||| ||||||||||    
T  9121658 taacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaatttagggacgaaattggccgatt 9121757  T
Q  123 ttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||| |||||| |||||| | |||||||||||||||    
T  9121758 tttcaaaattcaaggactattttgaggtattagtc 9121792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 33599249 - 33599187
Alignment:
Q  95 caaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||||||| |||||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  33599249 caaaattcaaggacgaatttgcccgatttttcaaaattcaaggacgaatttgaggtattagtc 33599187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 68 - 154
Target Start/End: Complemental strand, 51894656 - 51894570
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    ||||| ||| |||||||| ||||||||||||||||| |||| |||||| || ||||||||||||| ||| |||||||||| ||||||    
T  51894656 aaattcagggactaaatatatatttcgcaaaattcagagacaaatttgacccattttttaaaattcaagaacgaatttgatgtatta 51894570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 8169568 - 8169657
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||| | ||||||||  |||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  8169568 aaattcagggactaatttgatattttgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 8169657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 157
Target Start/End: Original strand, 47013072 - 47013206
Alignment:
Q  23 taacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgatt 122  Q
    |||||||  |||||||||||||||    ||||||| || | || |||||| ||| ||||| | ||||||||| ||||||||  |||||| ||| ||||||    
T  47013072 taacggacattttggacggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgtccgatt 47013171  T
Q  123 ttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||| |||||| |||||| | |||||||||||||||    
T  47013172 tttcaaaattcaaggactattttgaggtattagtc 47013206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 146
Target Start/End: Complemental strand, 33599289 - 33599229
Alignment:
Q  86 gatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttg 146  Q
    ||||||||||||||||||  |||||||||| ||||||||| |||||| |||||||||||||    
T  33599289 gatatttcgcaaaattcatggacgaatttgaccgatttttcaaaattcaaggacgaatttg 33599229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 158
Target Start/End: Complemental strand, 4854499 - 4854409
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtcc 158  Q
    ||||| ||| ||||| | ||| ||||||||||||||  |||||| |||  |||||||| |||||| |||||||||||||| ||||||||||    
T  4854499 aaattcagggactaatttgatctttcgcaaaattcagggacgaaattgaacgatttttcaaaattcaaggacgaatttgaagtattagtcc 4854409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 1444181 - 1444270
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||| | ||||||||  ||| || ||||||||||||| ||||||||||||| | |||||||||||||||    
T  1444181 aaattcagggactaatttgatattttgaaaaattcagggacaaaattggccgatttttcaaaatttaaggactattttgaggtattagtc 1444270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 9120128 - 9120039
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||| ||||||||  |||||| ||| ||||||||| |||||| |||||| | |||||||||||||||    
T  9120128 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggactattttgaggtattagtc 9120039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 47011545 - 47011456
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||| ||||||||  |||||| ||| ||||||||| |||||| |||||| | |||||||||||||||    
T  47011545 aaattcagggactaatttgatatttcgaaaaattcatggacgaaattgtccgatttttcaaaattcaaggactattttgaggtattagtc 47011456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 157
Target Start/End: Complemental strand, 45045009 - 45044949
Alignment:
Q  97 aaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||||  |||||||| | || ||||||||||||| ||||||||||||||||||||||||    
T  45045009 aaattcagggacgaattggaccaattttttaaaattcaaggacgaatttgaggtattagtc 45044949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 1442613 - 1442551
Alignment:
Q  94 gcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagt 156  Q
    ||||||||||  |||||| ||||||||||||| |||||| |||||| | | ||||||||||||    
T  1442613 gcaaaattcagggacgaaattggccgatttttcaaaattcaaggactattgtgaggtattagt 1442551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 42134617 - 42134492
Alignment:
Q  22 ctaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgat 121  Q
    ||||||||||  ||||||||||||| | |||||||| || ||||  ||||| ||| ||||| | ||||||||||| |||| |  || || |||||||||     
T  42134617 ctaacggagcacttggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgac 42134518  T
Q  122 tttttaaaatttaaggacgaatttga 147  Q
       | |||||| ||||||||||||||    
T  42134517 ccgtaaaaattcaaggacgaatttga 42134492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 51122045 - 51122005
Alignment:
Q  17 catcactaacggagcttttggacggagggatcattttgatg 57  Q
    |||||||||| || |||||||||||||||| ||||||||||    
T  51122045 catcactaacagaccttttggacggagggaccattttgatg 51122005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 5e-47; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 39859210 - 39859353
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||||||||||| |||||||| | || ||||||||||| | | ||||||||||||||||||||||||||  ||| ||||    
T  39859210 catcaccactaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaatt 39859309  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  39859310 tggccgattttttaaaattcaaggacgaatttgaggtattagtc 39859353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 34776896 - 34777036
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||||||||||||||| ||||||||||||||| |||||||||| || ||||||||||| ||| ||||||||||||||||||||||||||   | |||||    
T  34776896 catcatcactaacggagtttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggaatgaatt 34776995  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  34776996 tggccaattttttaaaatttaagaacgaatttgaggtatta 34777036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 30940406 - 30940550
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| |||||||||||||||||||||||| || ||||||||||||| | ||||||||| ||| ||||||||||||||||| |||||| | |||||||||    
T  30940406 catcaccactaacggagcttttggacggagagaccattttgatgaacgtttgtaaaattcagggactaaatagatatttcgtaaaattaagagacgaatt 30940505  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtcc 158  Q
    ||||||||||||||||||| ||| || ||||| ||||||||||||    
T  30940506 tggccgattttttaaaattcaagaacaaatttaaggtattagtcc 30940550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 47386190 - 47386333
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| |||||||||||||||||||||||  || |||||||||| || ||||||||||| ||  |||||||| |||||||||||||||||| ||||||||    
T  47386190 catcaccactaacggagcttttggacggaatgaccattttgatggacgtctgtaaaatttagagactaaataaatatttcgcaaaattcaaggacgaatt 47386289  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    || | |||||||||||||| ||||||||||||||||||||||||    
T  47386290 tgactgattttttaaaattaaaggacgaatttgaggtattagtc 47386333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 6602478 - 6602334
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| || ||||||||||| ||| ||||||||||||||||||||||||||  ||  | ||    
T  6602478 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggataagtt 6602379  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtcc 158  Q
    | ||||||||||||||||| |||| |||||||||| |||||||||    
T  6602378 tagccgattttttaaaattcaaggtcgaatttgagttattagtcc 6602334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 45359479 - 45359335
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||| ||||||| |||||||||| || ||||||||||| | | ||||||||||||||||||||||||||| |||| |||    
T  45359479 catcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcaaggacggatt 45359380  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtcc 158  Q
    || |||||||||||||||| | |||| ||||| ||||||||||||    
T  45359379 tgaccgattttttaaaattcatggacaaatttaaggtattagtcc 45359335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 37115507 - 37115650
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| |||||||||||||||||||||||||||  ||||||||| || ||||||||||| ||| ||||||||||||||| ||||||||||   |||||||    
T  37115507 catcaccactaacggagcttttggacggagggactattttgatggacgtctgtaaaattcaggtactaaatagatattttgcaaaattcaggaacgaatt 37115606  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    || | |||||||||||||| || |||||||||||||||||||||    
T  37115607 tgactgattttttaaaattcaatgacgaatttgaggtattagtc 37115650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 24228390 - 24228530
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| |||||| |||||||||||||| ||||| |||||||||| || ||||||||||| ||  ||||||||||||||||||||||||||  ||||||||    
T  24228390 catcaccactaatggagcttttggacgaagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcagggacgaatt 24228489  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    ||||| ||||||||||||| ||| ||||| |||||||||||    
T  24228490 tggccaattttttaaaattcaagaacgaaattgaggtatta 24228530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 13168266 - 13168145
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgagga---actaaatagatatttcgcaaaattcaaagacga 110  Q
    ||||| ||||||||||||||||||||||| ||| |||||||||| || ||||||||||| ||||   ||||||||||||||||||||||||||| |||||    
T  13168266 catcaccactaacggagcttttggacggatggaccattttgatggacgtctgtaaaattcaggagggactaaatagatatttcgcaaaattcaaggacga 13168167  T
Q  111 atttggccgattttttaaaatt 132  Q
    ||||||||||||||||||||||    
T  13168166 atttggccgattttttaaaatt 13168145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 38474124 - 38474267
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||||||| ||| |||||||||   | ||||||||||| | | ||||||||||||||||||||||||||  ||||||||    
T  38474124 catcaccactaacggagcttttggacggatggaccattttgataggcgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggacgaatt 38474223  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    || ||||||||| ||||||  ||||| |||||||||||||||||    
T  38474224 tgaccgatttttaaaaattcgaggactaatttgaggtattagtc 38474267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 37796165 - 37796302
Alignment:
Q  17 catcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttgg 116  Q
    |||| |||||||||||| ||||||||||||  ||||||||| || || |||||||| ||| ||||||||||||||||||||||||  | |||||||||||    
T  37796165 catcgctaacggagcttatggacggagggactattttgatggacgtccgtaaaattcagggactaaatagatatttcgcaaaatttgaggacgaatttgg 37796264  T
Q  117 ccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    | ||||||| |||||| |||||| ||||||||||||||    
T  37796265 ctgatttttgaaaattcaaggacaaatttgaggtatta 37796302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 157
Target Start/End: Original strand, 27666063 - 27666189
Alignment:
Q  31 cttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaa 130  Q
    ||||||||||||||||    ||||||| || | ||||||||| ||| ||||| | ||||||||||||||||||  |||||| ||||||||||||| ||||    
T  27666063 cttttggacggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaa 27666162  T
Q  131 tttaaggacgaatttgaggtattagtc 157  Q
    || ||||||||||||||||||||||||    
T  27666163 ttcaaggacgaatttgaggtattagtc 27666189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 154
Target Start/End: Original strand, 48227941 - 48228027
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    ||||| ||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||    
T  48227941 aaattcagggacaaaatagatatttcgcaaaattcaaagacgaatttgaccgattttttaaaattcaaagacgaatttgaggtatta 48228027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 13169683 - 13169772
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||||||||||||||||||||||||  ||| |||||||||||||||| |||||| ||||||||||||||||||||||||    
T  13169683 aaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtc 13169772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 78 - 158
Target Start/End: Complemental strand, 23904662 - 23904582
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtcc 158  Q
    ||||||||| ||||| |||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  23904662 actaaatagctattttgcaaaattcagagacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtcc 23904582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 39857724 - 39857648
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    ||||||||||||||||||||||||||  |||||||||| |||||||||||||||| |||||||||||||||||||||    
T  39857724 actaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtatta 39857648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 81 - 156
Target Start/End: Complemental strand, 24226657 - 24226582
Alignment:
Q  81 aaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagt 156  Q
    |||||| ||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  24226657 aaatagctatttcgcaaaattcaaggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagt 24226582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 23 - 157
Target Start/End: Original strand, 29996504 - 29996638
Alignment:
Q  23 taacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgatt 122  Q
    ||||||| |||||||| |||||||  | ||||||| || ||||||||||| ||| | ||| | ||||||||||||||||||  ||| || ||| ||||||    
T  29996504 taacggaccttttggatggagggacgaatttgatggacgtctgtaaaattcagggattaatttgatatttcgcaaaattcagggacaaaattgaccgatt 29996603  T
Q  123 ttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||| |||||| ||||||||||||||||||||||||    
T  29996604 tttcaaaattcaaggacgaatttgaggtattagtc 29996638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 157
Target Start/End: Complemental strand, 56435 - 56330
Alignment:
Q  52 ttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggta 151  Q
    |||||| || ||||||||||| ||| ||||| | ||||||||||||||||||  |||||| || |||||||||| |||||| ||||||||||||||||||    
T  56435 ttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggta 56336  T
Q  152 ttagtc 157  Q
    ||||||    
T  56335 ttagtc 56330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 35403619 - 35403708
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||||||||||||  |||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  35403619 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgattttttaaaattcaaggacgaatttgaggtattagtc 35403708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 37114030 - 37113941
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||||||||||||||||||||||||  || ||||||| || ||||||||||||| ||||||||||||||||||||||||    
T  37114030 aaatttagggactaaatagatatttcgcaaaattcagggatgaatttgaccaattttttaaaattcaaggacgaatttgaggtattagtc 37113941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 81 - 157
Target Start/End: Complemental strand, 46437183 - 46437107
Alignment:
Q  81 aaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  46437183 aaatagctatttcgcaaaattcaacgacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 46437107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 47384373 - 47384294
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||||||||||||||||||||| ||||||||||||  |||||| |||||| ||||||||||||||||||||||||    
T  47384373 actaattagatatttcgcaaaattcaaggacgaatttggctcatttttcaaaattcaaggacgaatttgaggtattagtc 47384294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 81 - 153
Target Start/End: Complemental strand, 35691503 - 35691431
Alignment:
Q  81 aaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtatt 153  Q
    |||||| |||||||||||||| | ||||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  35691503 aaatagctatttcgcaaaatttagagacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtatt 35691431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 68 - 154
Target Start/End: Original strand, 6605397 - 6605483
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    ||||| ||| ||||||||| ||||||||||||||||   || |||||| |||||||||||||||| |||||| ||||||||||||||    
T  6605397 aaattcagggactaaatagctatttcgcaaaattcaggaacaaatttgaccgattttttaaaattcaaggacaaatttgaggtatta 6605483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 13018173 - 13018036
Alignment:
Q  19 tcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatag--atatttcgcaaaattcaaagacgaatttgg 116  Q
    ||||||||||||   ||||||||||||| |||||||||| || | ||| ||||| ||  |  ||||||  ||||||||| |||||  | |||||||||||    
T  13018173 tcactaacggagtgattggacggagggaccattttgatggacgtatgttaaattcagagatgaaatagatatatttcgctaaatttgaggacgaatttgg 13018074  T
Q  117 ccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    | |||||||||||||| ||||| |||||||||||||||    
T  13018073 ctgattttttaaaattcaaggatgaatttgaggtatta 13018036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 23 - 157
Target Start/End: Complemental strand, 20478176 - 20478042
Alignment:
Q  23 taacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgatt 122  Q
    |||||||  |||||||||||||||    ||||||| || |||| |||||| ||| ||||| | ||||||||| ||||||||   ||||| ||||||||||    
T  20478176 taacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcaggtacgaaattggccgatt 20478077  T
Q  123 ttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||| |||||| |||||| | |||||||||||||||    
T  20478076 tttcaaaattcaaggactattttgaggtattagtc 20478042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 80 - 158
Target Start/End: Complemental strand, 38549624 - 38549546
Alignment:
Q  80 taaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtcc 158  Q
    |||||||||||||| |||||||||  |||||| ||||| ||||||| |||||| |||||||||||| ||||||||||||    
T  38549624 taaatagatatttcacaaaattcagggacgaacttggctgatttttgaaaattcaaggacgaatttaaggtattagtcc 38549546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 22155847 - 22155936
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| || |||||| ||||| ||||||||||  |||||||||||||||||||| |||||| ||||||||| || |||||||||||    
T  22155847 aaattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaaggacgaagtttaggtattagtc 22155936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 22211762 - 22211851
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| || |||||| ||||| ||||||||||  |||||||||||||||||||| |||||| ||||||||| || |||||||||||    
T  22211762 aaattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaaggacgaagtttaggtattagtc 22211851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 35402058 - 35401969
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||||||||||||  |||||| || |||||||||| |||||| ||||||||||||||| ||||||||    
T  35402058 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgatttttcaaaattcaaggacgaatttgagatattagtc 35401969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 78032 - 78104
Alignment:
Q  86 gatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtcc 158  Q
    ||||||| ||||||||||  |||||| ||||||||||||| |||||| || ||||||||||||||||||||||    
T  78032 gatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaagacgaatttgaggtattagtcc 78104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 23906305 - 23906357
Alignment:
Q  106 gacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtcc 158  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  23906305 gacgaatttggccgattttttaaaattcaaggaggaatttgaggtattagtcc 23906357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 35693351 - 35693454
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaa--atagatatttcgcaaaattcaaagacgaa 111  Q
    ||||| ||||||| || |||||||| ||||||| |||||||||| || ||||||||||| ||| |||||  | ||||||| |||||||||||| ||||||    
T  35693351 catcaccactaacagaacttttggatggagggaccattttgatggacgtctgtaaaattcagggactaattagagatattccgcaaaattcaaggacgaa 35693450  T
Q  112 tttg 115  Q
    ||||    
T  35693451 tttg 35693454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 157
Target Start/End: Original strand, 46439538 - 46439622
Alignment:
Q  73 gaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||| |||||||||||||||||||||||| |||||| | ||||  |||||||| |||||| || |||||||||||| ||||||||    
T  46439538 gagggactaaatagatatttcgcaaaatttaaagacaagtttgatcgatttttaaaaattcaatgacgaatttgagatattagtc 46439622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 20479719 - 20479808
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||| ||||||||  |||||| ||||||||||||| |||||| |||||| | |||||||||||||||    
T  20479719 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 20479808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 34775087 - 34774998
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||||||| ||||| ||||||||||   | ||||||| |||||||||||||||| || |||||||||||| ||||||||    
T  34775087 aaattcagggactaaatagctattttgcaaaattcatgaatgaatttgaccgattttttaaaattcaaagacgaatttgagatattagtc 34774998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 29994966 - 29994907
Alignment:
Q  97 aaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagt 156  Q
    |||||||  |||||| ||||||||||||| |||||| |||||||||||||||||||||||    
T  29994966 aaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagt 29994907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 154
Target Start/End: Complemental strand, 37791744 - 37791657
Alignment:
Q  67 aaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    |||||| ||| ||||||||||||||| ||||||||    || ||||||||| ||||||||||||||||| |||||| || ||||||||    
T  37791744 aaaatttagggactaaatagatatttggcaaaatttggggatgaatttggctgattttttaaaatttaaagacgaagtttaggtatta 37791657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 48852328 - 48852415
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaatt 101  Q
    ||||| ||||||| |||||||||||| ||| || |||||||||| || ||||||||||| | | | ||||||||||||| ||||||||    
T  48852328 catcaccactaacagagcttttggaccgagagaccattttgatggacgtctgtaaaattcaaggattaaatagatattttgcaaaatt 48852415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 154
Target Start/End: Complemental strand, 27664519 - 27664433
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    ||||| ||| ||||| | ||||||| ||||||||||  ||| || ||||||||||||| |||||| |||||| ||||||||||||||    
T  27664519 aaattcagggactaatttgatattttgcaaaattcagggacaaaattggccgatttttcaaaattcaaggactaatttgaggtatta 27664433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 148
Target Start/End: Original strand, 13039641 - 13039722
Alignment:
Q  67 aaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgag 148  Q
    |||||| ||| ||||||||| |||||||||||||| |  ||||||||||   ||||||| |||||| ||||||||| |||||    
T  13039641 aaaattcagggactaaatagttatttcgcaaaatttagggacgaatttgattgatttttgaaaattcaaggacgaacttgag 13039722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 23906251 - 23906300
Alignment:
Q  23 taacggagcttttggacggagggatcattttgatgaacatctgtaaaatt 72  Q
    |||||||||||||||||||||||| |||||||||| ||  ||||||||||    
T  23906251 taacggagcttttggacggagggaccattttgatggacgactgtaaaatt 23906300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 1546427 - 1546387
Alignment:
Q  17 catcactaacggagcttttggacggagggatcattttgatg 57  Q
    ||||||||||||| |||||||||||||||| ||||||||||    
T  1546427 catcactaacggaccttttggacggagggaccattttgatg 1546387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 45361286 - 45361365
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||  ||||| ||||||||||   || || ||| || ||||||||||||| ||||| ||||||||||||||||||    
T  45361286 actaaataactattttgcaaaattcaggaacaaaattgacccattttttaaaattcaaggaagaatttgaggtattagtc 45361365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 147
Target Start/End: Original strand, 33038798 - 33038911
Alignment:
Q  34 ttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaattt 133  Q
    ||||||||||||| | |||||||| || |||| |||||| ||| ||||| | ||||||||||| |||| |  || ||||||| ||||    | ||||||     
T  33038798 ttggacggagggacctttttgatggacgtctgaaaaattcagggactaagttgatatttcgcataattgagggatgaatttgaccgacccataaaaattc 33038897  T
Q  134 aaggacgaatttga 147  Q
    ||||||||||||||    
T  33038898 aaggacgaatttga 33038911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 2e-46; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 49523267 - 49523125
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||  ||||||||||||||| ||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||  ||||||||    
T  49523267 catcaccactaacggattttttggacggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcatggacgaatt 49523168  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagt 156  Q
    | ||||||||||||||||| || ||||||||||||||||||||    
T  49523167 tagccgattttttaaaattcaatgacgaatttgaggtattagt 49523125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 41761727 - 41761867
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| |||||||| |||||||||||||||||| |||||||||| || ||||||||||| ||| ||||||||||||||||||||||||    ||||||||    
T  41761727 catcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttcgggacgaatt 41761826  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  41761827 tggccgatttttgaaaattcaaggacgaatttgaggtatta 41761867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 21 - 157
Target Start/End: Complemental strand, 51012062 - 51011926
Alignment:
Q  21 actaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccga 120  Q
    |||||| ||||||||||||||||||| |||||||||| || ||||||||||| ||  |||||||||||||||||||||||||||  | ||||||| ||||    
T  51012062 actaacagagcttttggacggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcaagaaagaatttgaccga 51011963  T
Q  121 ttttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  51011962 ttttttaaaattcaaggacgaatttgagatattagtc 51011926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 41781682 - 41781539
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |  ||||||||||| ||| |||||||| |||||| ||||||||||  ||| ||||    
T  41781682 catcatcactaacggagcttttggacggagggaccattttgatggatgtctgtaaaattcagggactaaataaatattttgcaaaattcagggacaaatt 41781583  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    || |||||||||||||||| ||| || |||||||||||||||||    
T  41781582 tgaccgattttttaaaattcaagaacaaatttgaggtattagtc 41781539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 35404426 - 35404569
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||||||| ||| ||||||| || || ||||||||||| ||| | |||||| ||||||||||||||| || ||||||||    
T  35404426 catcaccactaacggagcttttggacggatggaccattttgttggacgtctgtaaaattcagggattaaataaatatttcgcaaaattgaaggacgaatt 35404525  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    | ||||||||||||||||| ||| | |||| |||||||||||||    
T  35404526 tagccgattttttaaaattcaagtatgaatctgaggtattagtc 35404569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 48813930 - 48813786
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||| ||| ||||||||||||| ||||| |||||||||| || ||| ||||||| |||||||||||| |||||| ||||||||||  ||  ||||    
T  48813930 catcaccaccaacagagcttttggacgaagggaccattttgatggacgtctataaaattcaggaactaaatatatattttgcaaaattcagggataaatt 48813831  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtcc 158  Q
    |||| ||||||| |||||| |||||||||||||||||||||||||    
T  48813830 tggctgatttttgaaaattcaaggacgaatttgaggtattagtcc 48813786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 20493916 - 20493827
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| |||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||| || |||||||||||||||||||||    
T  20493916 aaattcaggaactaaatagatatttcgcaaaattcaagaacgaatttggccgatattttaaaattcaatgacgaatttgaggtattagtc 20493827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 48646728 - 48646852
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| |||||||| |||||||||||||| ||| ||||||||||||  ||||||||||| ||| |||||||||||||||||| |||||||| ||||||||    
T  48646728 catcaccactaacgaagcttttggacggaaggaccattttgatgaaggtctgtaaaattcagggactaaatagatatttcgctaaattcaaggacgaatt 48646827  T
Q  114 tggccgattttttaaaatttaagga 138  Q
    | || || |||| |||||| |||||    
T  48646828 tagctgacttttgaaaattcaagga 48646852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 35401828 - 35401749
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||||||||||||| |||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35401828 actaaatagatatttcacaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 35401749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 43519550 - 43519423
Alignment:
Q  31 cttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaa 130  Q
    ||||||||||||||||    ||||||| || | ||||||||| ||| ||||| | ||||||||||||||||||  |||||| ||||||||||||| ||||    
T  43519550 cttttggacggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaa 43519451  T
Q  131 tttaaggacgaatttgaggtattagtcc 158  Q
    || |||||||||||||||||||||||||    
T  43519450 ttcaaggacgaatttgaggtattagtcc 43519423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 52868136 - 52868254
Alignment:
Q  20 cactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccg 119  Q
    ||||||||||||||||||||| || || |||||||||   | ||||| ||||| ||  |||||||||||||||||||||||| | ||||||||||| |||    
T  52868136 cactaacggagcttttggacgaagtgaccattttgataggcgtctgttaaattcagagactaaatagatatttcgcaaaatttatagacgaatttgaccg 52868235  T
Q  120 attttttaaaatttaagga 138  Q
    ||||||||||||| |||||    
T  52868236 attttttaaaattcaagga 52868254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 49524733 - 49524822
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||||||| ||||| ||||||||||  |||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  49524733 aaattcagggactaaatagctattttgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 49524822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 42980778 - 42980674
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||| || ||||||||||| ||| |||||||||| |||||| ||||||||  ||| ||||    
T  42980778 catcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattaagggactaaatagaaatttcgtaaaattcatggacaaatt 42980679  T
Q  114 tggcc 118  Q
    |||||    
T  42980678 tggcc 42980674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 39345653 - 39345574
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttga 147  Q
    ||||| ||| ||||||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||    
T  39345653 aaattcagggactaaatagctatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 39345574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 48645334 - 48645255
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||||||||||  |||||||||| | ||||||| |||||| ||||||||||||||||||||||||    
T  48645334 actaaatagatatttcgcaaaattcatggacgaatttgactgatttttgaaaattcaaggacgaatttgaggtattagtc 48645255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 158
Target Start/End: Original strand, 4173740 - 4173830
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtcc 158  Q
    ||||| ||| ||||| | ||||||||||||||||||  |||||| ||||||||||||| |||||| |||||||||||||||||||||||||    
T  4173740 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcc 4173830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 319362 - 319273
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||||||||| | ||||||||||||||||||  |||||| ||| ||||||||| |||||| ||||||||||||||||||||||||    
T  319362 aaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 319273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 43507256 - 43507167
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||||||||||||  |||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  43507256 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 43507167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 43508653 - 43508742
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||||||||||||  |||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  43508653 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 43508742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 320918 - 320989
Alignment:
Q  86 gatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||| || ||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  320918 gatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 320989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 33264471 - 33264382
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||||||||| | ||||||| ||||||||||  |||||| ||| ||||||||| |||||| ||||||||||||||||||||||||    
T  33264471 aaattcaggaactaatttgatattttgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 33264382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 2693234 - 2693373
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    |||||||||||| ||| ||| |||||||| ||| |||||||||| |||| | ||||||| |   |||||||||||||||||||||||| |   |  ||||    
T  2693234 catcatcactaatggaacttatggacggatggaccattttgatggacat-tttaaaattcaaagactaaatagatatttcgcaaaatttaggaataaatt 2693332  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    |||| |||||||||||||| || |||||| |||||||||||    
T  2693333 tggctgattttttaaaattcaaagacgaagttgaggtatta 2693373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 4169775 - 4169686
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | |||||||||||||||||| ||||||| |||  | |||||| |||||| ||||||||||||||||||||||||    
T  4169775 aaattcagggactaatttgatatttcgcaaaattcagagacgaaattgatcaatttttcaaaattcaaggacgaatttgaggtattagtc 4169686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 88 - 153
Target Start/End: Complemental strand, 11254188 - 11254123
Alignment:
Q  88 tatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtatt 153  Q
    |||||||||||||| | ||||| ||||||||||||||| |||||| ||||||||||||||||||||    
T  11254188 tatttcgcaaaatttagagacggatttggccgatttttaaaaattcaaggacgaatttgaggtatt 11254123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 51013904 - 51013975
Alignment:
Q  86 gatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||| ||||||||||  |||||| ||| ||||||||| |||||| ||||||||||||||||||||||||    
T  51013904 gatattttgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 51013975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 160
Target Start/End: Complemental strand, 7149662 - 7149536
Alignment:
Q  34 ttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaattt 133  Q
    ||||||||||||| |||||||||  || | ||| ||||| | | |  ||||| ||||||||||||||| ||||| ||||| ||| ||||||| ||||||     
T  7149662 ttggacggagggaccattttgattgacctatgttaaattcaaggatgaaataaatatttcgcaaaatttaaagatgaattcggctgatttttgaaaattc 7149563  T
Q  134 aaggacgaatttgaggtattagtcctt 160  Q
    ||||| |||||| | |||||| |||||    
T  7149562 aaggatgaattttatgtattactcctt 7149536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 158
Target Start/End: Original strand, 33266010 - 33266100
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtcc 158  Q
    ||||| ||| ||||| | ||||||||||||||||||   ||||| || |||||||||| |||||| ||| ||||||||||| |||||||||    
T  33266010 aaattcagggactaatttgatatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaagaacgaatttgagatattagtcc 33266100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 11601810 - 11601674
Alignment:
Q  17 catcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttgg 116  Q
    ||||||||||| ||||| ||||| ||||||  ||||||||| || ||||||||||| ||| ||| |||| |||||| ||||||||    ||  ||||||     
T  11601810 catcactaacgaagcttgtggacagagggactattttgatggacgtctgtaaaattcagggact-aatatatattttgcaaaatttggggataaatttga 11601712  T
Q  117 ccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    | ||||||| |||||| ||| |||||||| ||||||||    
T  11601711 ctgatttttgaaaattcaagaacgaattttaggtatta 11601674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 43521109 - 43521193
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtat 152  Q
    ||||| ||| ||||| | |||||||||||||||||||| ||||| ||| | ||||||| |||||| ||| || ||||||||||||    
T  43521109 aaattcagggactaatttgatatttcgcaaaattcaaaaacgaaattgactgatttttcaaaattcaagaacaaatttgaggtat 43521193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 833294 - 833223
Alignment:
Q  86 gatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||| | ||||||  |||||| ||||||||||||| |||||| |||||| | |||||||||||||||    
T  833294 gatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 833223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 5439665 - 5439736
Alignment:
Q  86 gatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||| | ||||||  |||||| ||||||||||||| |||||| |||||| | |||||||||||||||    
T  5439665 gatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 5439736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 160
Target Start/End: Complemental strand, 2691463 - 2691371
Alignment:
Q  67 aaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtcctt 160  Q
    |||||| ||| ||||||||||||||| ||||||||    |||||||||||| ||||||| |||||| || || ||| ||||||||||| |||||    
T  2691463 aaaattcagggactaaatagatattttgcaaaatttgtggacgaatttggctgatttttgaaaattcaa-gatgaagttgaggtattattcctt 2691371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 5437882 - 5437811
Alignment:
Q  86 gatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||| | ||||||  |||||| || |||||||||| |||||| |||||| | |||||||||||||||    
T  5437882 gatatttcgaataattcagggacgaaatttgccgatttttcaaaattcaaggactattttgaggtattagtc 5437811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 42982472 - 42982541
Alignment:
Q  88 tatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||  |||||||||| | ||||||| |||||| |||||  ||||| | |||||||||    
T  42982472 tatttcgcaaaattcagggacgaatttgacagatttttaaaaattcaaggaaaaatttaacgtattagtc 42982541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 2e-40; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 21 - 157
Target Start/End: Original strand, 32439079 - 32439215
Alignment:
Q  21 actaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccga 120  Q
    |||||| || |||||||||||||||| |||||||||| || ||||||||||| ||| ||||||||||||||||||||||||||  |||||||||| ||||    
T  32439079 actaacagatcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccga 32439178  T
Q  121 ttttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||||||||| || ||| |||||||||||||||||    
T  32439179 ttttttaaaattcaatgactaatttgaggtattagtc 32439215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 20523509 - 20523367
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || ||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  20523509 catcaccactaacagaacttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatt 20523410  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagt 156  Q
    || ||||||||| ||||||  |||| |||||||| ||||||||    
T  20523409 tgaccgatttttgaaaattctaggaagaatttgatgtattagt 20523367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 6899628 - 6899485
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||||| ||||| |||||||||| |  ||||||||||| ||| |||||||||||||||| ||||||| | |||||||||    
T  6899628 catcaacactaacggagcttttggacgaagggaccattttgatggatgtctgtaaaatttagggactaaatagatatttcacaaaatttagagacgaatt 6899529  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    || | ||||||| |||||| |||||| |||||||||||||||||    
T  6899528 tgactgatttttgaaaattcaaggacaaatttgaggtattagtc 6899485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 10568542 - 10568403
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| |||||||||||||||||||||||||||  ||||||||  || ||||||||||| ||| |||||||| ||||||||| |||||||| ||||||||    
T  10568542 catcaccactaacggagcttttggacggagggactattttgatagacgtctgtaaaattcagggactaaataaatatttcgctaaattcaaggacgaatt 10568443  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtatt 153  Q
    || | ||||||| |||||| |||||||||||||| |||||    
T  10568442 tgactgatttttgaaaattcaaggacgaatttgatgtatt 10568403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 32517020 - 32516877
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| |||||||||||||||||||||||||||  ||||||||| || | ||||||||| | |  |||||||| ||||| | ||||||||  ||||||||    
T  32517020 catcaccactaacggagcttttggacggagggacaattttgatggacgtatgtaaaattcaagggctaaataggtattttgtaaaattcagggacgaatt 32516921  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    || |||||||||||||||| ||||||||||||||||||||||||    
T  32516920 tgaccgattttttaaaattcaaggacgaatttgaggtattagtc 32516877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 11355365 - 11355223
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||| ||||||||||||||||||||| ||||||| ||  | ||||||||||| ||| | | ||||||||||||  ||||||||  ||||||||    
T  11355365 catcaccactaccggagcttttggacggagggaccattttggtggccgtctgtaaaattcagggagttaatagatatttcataaaattcagtgacgaatt 11355266  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagt 156  Q
    || |||||||||||||||| |||||||||||||||||||||||    
T  11355265 tgaccgattttttaaaattcaaggacgaatttgaggtattagt 11355223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 7372939 - 7373079
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| |||||| |||||||||||||||||||| |||||||||| ||  |||||||||| ||| |||||||| |||||||||||||||||  ||||||||    
T  7372939 catcaccactaatggagcttttggacggagggaccattttgatggacgcctgtaaaattcagggactaaataaatatttcgcaaaattcagggacgaatt 7373038  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    || || |||||| |||||| ||  |||||||||||||||||    
T  7373039 tgaccaatttttaaaaattcaatcacgaatttgaggtatta 7373079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 13613563 - 13613706
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| |||||| ||| ||||||||||||||||  | ||||||| || ||||||||||| ||| ||||| | ||||||||||||||||||  ||||||||    
T  13613563 catcaccactaatggaccttttggacggagggactaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaatt 13613662  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    || ||||||||| |||||| |||||||||||| |||||||||||    
T  13613663 tgaccgatttttcaaaattcaaggacgaatttaaggtattagtc 13613706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 9398803 - 9398714
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattca 103  Q
    ||||| |||||||||| |||||||||||||||| ||||||||||||| ||| ||||||| ||| ||||||||||||||||||||||||||    
T  9398803 catcaccactaacggaacttttggacggagggaccattttgatgaacgtctataaaattcagggactaaatagatatttcgcaaaattca 9398714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 10569929 - 10570008
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||| ||||||||||  |||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  10569929 actaaatagatattttgcaaaattcatggacgaatttggctgattttttaaaattcaaggacgaatttgaggtattagtc 10570008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 142
Target Start/End: Original strand, 14338456 - 14338584
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    |||||||| |||||||||||||| ||||||||| |||||||||| || ||||| ||||| ||| |  || |||| |||||||||||||  | ||||||||    
T  14338456 catcatcagtaacggagcttttgaacggagggaccattttgatggacgtctgtgaaattcagggatgaattagacatttcgcaaaatttgaggacgaatt 14338555  T
Q  114 tggccgattttttaaaatttaaggacgaa 142  Q
    |||| ||||||| |||||| |||||||||    
T  14338556 tggctgatttttaaaaattcaaggacgaa 14338584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 9400045 - 9400124
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||||||||||||||||||||| || ||||||| | ||||||| |||||| ||||||||||||||||||||||||    
T  9400045 actaattagatatttcgcaaaattcaaggatgaatttgactgatttttcaaaattcaaggacgaatttgaggtattagtc 9400124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 32518497 - 32518586
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||||||||||||  || ||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  32518497 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 32518586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 7051255 - 7051334
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||||||||||||||||||||||| ||||||||||| | |||||||||||||| ||   ||||||| |||||||||||    
T  7051255 actaaatagatatttcgcaaaattcagagacgaatttgactgattttttaaaattcaaattcgaatttaaggtattagtc 7051334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 18645122 - 18645192
Alignment:
Q  86 gatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||||||||||||||| ||||||||| | ||||||||| |||||| ||||||||||||||||||||||||    
T  18645122 gatatttcgcaaaattcagagacgaatt-gtccgatttttcaaaattcaaggacgaatttgaggtattagtc 18645192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 88 - 157
Target Start/End: Complemental strand, 7371244 - 7371175
Alignment:
Q  88 tatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||  ||| |||||||||||||||| |||||| ||||||||| ||||||||||||||    
T  7371244 tatttcgcaaaattcagggaccaatttggccgatttttgaaaattcaaggacgaagttgaggtattagtc 7371175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 11357194 - 11357283
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||||| | |||||  |||||||||  |||||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  11357194 aaattcagggactaaattgctatttttcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgatgtattagtc 11357283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 32454337 - 32454248
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||| ||||||||| |||||| ||||||||||||| |||||| |||||| | |||||||||||||||    
T  32454337 aaattcagggactaatttgatatttcgaaaaattcaaggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 32454248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 32455872 - 32456016
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    |||||| | |||||||  |||||||||||||||    ||||||| || |||| |||||| ||  ||||| | ||||||||| ||||||||  |||||| |    
T  32455872 catcattattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagtgactaatttgatatttcgaaaaattcagggacgaaat 32455971  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattagtcc 158  Q
    || ||||||||| |||||| |||||| | ||||||||||||||||    
T  32455972 tgaccgatttttcaaaattcaaggactattttgaggtattagtcc 32456016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 6902908 - 6902986
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||||||||||| ||||||||| |  |||||||||| | ||||||| |||||| ||||||||||||||||||||||||    
T  6902908 actaaatagatatt-cgcaaaatttagggacgaatttgactgatttttgaaaattcaaggacgaatttgaggtattagtc 6902986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 159 - 270
Target Start/End: Complemental strand, 31841967 - 31841856
Alignment:
Q  159 ttctcccacactatccacgtttattttaatagtatgtgtagaaaatctagatgccacctcctactatttattggaacaccaaaaatgcctaacctttaaa 258  Q
    |||| ||| ||||||||| ||| ||||||| || || |||||||||||||||||||||||||||||| |||| |   | |||||||||| ||| ||| ||    
T  31841967 ttcttccatactatccacttttgttttaatcgtttgcgtagaaaatctagatgccacctcctactatgtattaggcaaacaaaaatgcccaacttttgaa 31841868  T
Q  259 actatctgtatt 270  Q
    ||||||| ||||    
T  31841867 actatctatatt 31841856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 153
Target Start/End: Complemental strand, 33276879 - 33276805
Alignment:
Q  79 ctaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtatt 153  Q
    ||||||||||||||||||||||| | | ||||||||| | |||||||||||||| ||||||||| ||||| ||||    
T  33276879 ctaaatagatatttcgcaaaatttagaaacgaatttgactgattttttaaaattcaaggacgaagttgagttatt 33276805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 3456882 - 3456766
Alignment:
Q  23 taacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgatt 122  Q
    |||||||  |||||||||||||||    ||||||| || |||| |||||| ||| ||||| | ||||||||| ||||||||  |||||| ||||||||||    
T  3456882 taacggatattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatt 3456783  T
Q  123 ttttaaaatttaaggac 139  Q
    ||| |||||| ||||||    
T  3456782 tttcaaaattcaaggac 3456766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 32437208 - 32437140
Alignment:
Q  89 atttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||||||||||||  |||||| ||||||||||||| |||||| || ||| |||||||||||||||||    
T  32437208 atttcgcaaaattcagggacgaaattggccgatttttcaaaattcaatgacaaatttgaggtattagtc 32437140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 3480675 - 3480746
Alignment:
Q  86 gatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||| ||||||||  |||||| ||||||||||||| |||||| |||||| | |||||||||||||||    
T  3480675 gatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 3480746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 157
Target Start/End: Original strand, 8605363 - 8605414
Alignment:
Q  106 gacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  8605363 gacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 8605414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 13610761 - 13610690
Alignment:
Q  86 gatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||||||||||||  ||| ||||||  |||||||| |||||| |||||||||||| |||||||||||    
T  13610761 gatatttcgcaaaattcagggacaaatttgatcgatttttcaaaattcaaggacgaatttaaggtattagtc 13610690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 7049900 - 7049842
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaatt 72  Q
    ||||| ||| ||||||||||||||||||||||| |||||||||| || |||||||||||    
T  7049900 catcaccacgaacggagcttttggacggagggaccattttgatggacgtctgtaaaatt 7049842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 81 - 157
Target Start/End: Original strand, 20525347 - 20525423
Alignment:
Q  81 aaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    |||||| ||||| ||||||||||  || ||||||| || |||||| |||||| || |||||||||||||||||||||    
T  20525347 aaatagctattttgcaaaattcagggatgaatttgacctatttttaaaaattcaaagacgaatttgaggtattagtc 20525423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 21068704 - 21068628
Alignment:
Q  78 actaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    ||||||||||||||||| ||||||    |||||||||| | |||| || |||||| |||||||||||||||||||||    
T  21068704 actaaatagatatttcgtaaaatttgtggacgaatttgactgattgttgaaaattcaaggacgaatttgaggtatta 21068628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 153
Target Start/End: Complemental strand, 7049847 - 7049790
Alignment:
Q  96 aaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtatt 153  Q
    ||||||||  |||||||||||| ||||||| |||||| ||||| ||||||||| ||||    
T  7049847 aaaattcagggacgaatttggctgatttttgaaaattcaaggaagaatttgagatatt 7049790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 21091153 - 21091109
Alignment:
Q  110 aatttggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    |||||||  ||||||| |||||| |||||||||||||||||||||    
T  21091153 aatttggttgatttttgaaaattcaaggacgaatttgaggtatta 21091109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 1406 - 1266
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| || ||||||||||| ||| ||||||||||||||||  ||||||||  ||||||||    
T  1406 catcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcataaaattcatggacgaatt 1307  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    |  || ||||||||||||| ||||||| |||||||||||||    
T  1306 taaccaattttttaaaattcaaggacggatttgaggtatta 1266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 8403 - 8264
Alignment:
Q  14 catcatcactaacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatt 113  Q
    ||||| |||||||| |||||||||||||| | | |||||||||| || | |  |||||| ||| ||||||||||||||| |||||||||||  |||||||    
T  8403 catcaccactaacgaagcttttggacggatgtaccattttgatggacgtat--aaaattcagggactaaatagatattttgcaaaattcaagaacgaatt 8306  T
Q  114 tggccgattttttaaaatttaaggacgaatttgaggtattag 155  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  8305 tggccaattttttaaaattcaaggacgaatttgaggtattag 8264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 71; Significance: 4e-32; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 23 - 157
Target Start/End: Complemental strand, 3428 - 3294
Alignment:
Q  23 taacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgatt 122  Q
    ||||||| ||||||||||||||||  | ||||||| || ||||||||||| ||| ||||| | ||||||||||||||||||  ||| || ||||||||||    
T  3428 taacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacaaaattggccgatt 3329  T
Q  123 ttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||| |||||| ||||||||||||||||||||||||    
T  3328 tttcaaaattcaaggacgaatttgaggtattagtc 3294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 23 - 157
Target Start/End: Complemental strand, 4600 - 4466
Alignment:
Q  23 taacggagcttttggacggagggatcattttgatgaacatctgtaaaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgatt 122  Q
    ||||||| ||||||||||||||||  | ||||||| || ||||||||||| ||| ||||| | ||||||||||||||||||  ||| || ||||||||||    
T  4600 taacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacaaaattggccgatt 4501  T
Q  123 ttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||| |||||| ||||||||||||||||||||||||    
T  4500 tttcaaaattcaaggacgaatttgaggtattagtc 4466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 14343 - 14432
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||||||||||||  |||||| || |||||||||| |||||| ||||||||||||||||||||||||    
T  14343 aaattcagggactaatttgatatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 14432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 1555 - 1644
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||||| | |||||  |||||||||  |||||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  1555 aaattcagggactaaattgctatttttcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgatgtattagtc 1644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 54258 - 54347
Alignment:
Q  68 aaattgaggaactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||| ||| ||||| | ||||||||| ||||||||  |||||| ||| ||||||||| |||||| |||||| | |||||||||||||||    
T  54258 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggactattttgaggtattagtc 54347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 436341 - 436272
Alignment:
Q  81 aaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggt 150  Q
    ||||||||||||||||||||| |  || ||||||||| ||||||| |||||| ||| |||||||||||||    
T  436341 aaatagatatttcgcaaaatttatggatgaatttggctgatttttgaaaattcaagaacgaatttgaggt 436272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 1053 - 982
Alignment:
Q  86 gatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtattagtc 157  Q
    ||||||||| | ||||||  |||||| || |||||||||| |||||| |||||| | |||||||||||||||    
T  1053 gatatttcgaataattcagggacgaaatttgccgatttttcaaaattcaaggactattttgaggtattagtc 982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 106748 - 106673
Alignment:
Q  77 aactaaatagatatttcgcaaaattcaaagacgaatttggccgattttttaaaatttaaggacgaatttgaggtatta 154  Q
    |||||||||||||||||| ||||||||  ||| |||||||| ||||  |  ||||| ||||||||||||||| |||||    
T  106748 aactaaatagatatttcgtaaaattcatggacaaatttggctgattggt--aaattcaaggacgaatttgagatatta 106673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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