View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21675_high_35 (Length: 335)
Name: NF21675_high_35
Description: NF21675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21675_high_35 |
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Alignment Details
Target: chr8 (Bit Score: 305; Significance: 1e-172; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 305; E-Value: 1e-172
Query Start/End: Original strand, 1 - 333
Target Start/End: Original strand, 16961392 - 16961724
Alignment:
| Q |
1 |
aagtactagtgattgaagattgttaagatgtgaaagctgagatggtatttctccactaaagtaatttgagctaatgttaagtatttctagtgaagataat |
100 |
Q |
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| T |
16961392 |
aagtactaatgattgaagattgttaagatgtgaaagttgagatggtatttctccactaaagtaatttgagctaatgttaagtatttctagtgaagataat |
16961491 |
T |
|
| Q |
101 |
tgagctattgtttcaggtagtggcccccataaaccaagagaaaccaaagagagtactttcaagcttgataaagtgggaagtgttgaaaagagtgtgtatg |
200 |
Q |
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| T |
16961492 |
tgagctattgtttcaggtagtggcccccataaaccaagtgaaaccaaagagagtactttcaagcttgataaagtggaaagtgttgaaaagagtgtgtatg |
16961591 |
T |
|
| Q |
201 |
agttgaaattttgaggcaatgaagtaaactcattgttgtttccaacaacatgcaactgtgtaacattttcttcatagcacactagtgttaaatatggagt |
300 |
Q |
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|||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16961592 |
agttgaaattttgaggcaatgaggtgaactcattggtgtttccaacaacatgcaactgtgtaacattttcttcatagcacactagtgttaaatatggagt |
16961691 |
T |
|
| Q |
301 |
aggttcaatgttgcagaaatctgtggtgctgct |
333 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
16961692 |
aggttcaatgttgcagaaatctgtggtgctgct |
16961724 |
T |
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