View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21675_high_8 (Length: 388)

Name: NF21675_high_8
Description: NF21675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21675_high_8
NF21675_high_8
[»] chr4 (39 HSPs)
chr4 (24-359)||(54123246-54123581)
chr4 (24-359)||(32082332-32082669)
chr4 (24-360)||(10337868-10338206)
chr4 (23-359)||(42977220-42977557)
chr4 (23-359)||(48711880-48712216)
chr4 (38-359)||(54121864-54122193)
chr4 (23-359)||(42978612-42978956)
chr4 (24-359)||(10337127-10337468)
chr4 (24-277)||(48713245-48713498)
chr4 (72-357)||(16879229-16879521)
chr4 (24-123)||(19994521-19994620)
chr4 (23-123)||(55948890-55948990)
chr4 (24-123)||(19995991-19996090)
chr4 (207-277)||(42978594-42978664)
chr4 (24-123)||(44251628-44251727)
chr4 (207-277)||(54123228-54123298)
chr4 (26-123)||(44253129-44253226)
chr4 (24-123)||(18597655-18597754)
chr4 (207-277)||(54122141-54122211)
chr4 (207-277)||(10337416-10337486)
chr4 (207-277)||(10337851-10337921)
chr4 (24-123)||(55947383-55947482)
chr4 (79-150)||(16880399-16880470)
chr4 (68-123)||(53355167-53355222)
chr4 (207-277)||(16879471-16879541)
chr4 (207-277)||(48712164-48712234)
chr4 (212-277)||(32082314-32082379)
chr4 (307-359)||(48713263-48713315)
chr4 (212-277)||(42977510-42977575)
chr4 (225-272)||(3069123-3069170)
chr4 (24-59)||(18597855-18597890)
chr4 (174-249)||(33609153-33609228)
chr4 (36-138)||(22307706-22307808)
chr4 (99-148)||(42226630-42226679)
chr4 (225-277)||(36887152-36887204)
chr4 (33-113)||(21354723-21354803)
chr4 (24-92)||(24919075-24919143)
chr4 (69-120)||(39654614-39654665)
chr4 (34-138)||(42889733-42889836)
[»] chr6 (16 HSPs)
chr6 (24-359)||(8745455-8745790)
chr6 (23-359)||(1256736-1257080)
chr6 (24-359)||(1258138-1258476)
chr6 (24-359)||(2955936-2956271)
chr6 (24-359)||(8752493-8752836)
chr6 (237-359)||(8752003-8752125)
chr6 (207-277)||(8745738-8745808)
chr6 (207-277)||(8752073-8752143)
chr6 (24-123)||(19084057-19084156)
chr6 (212-277)||(1258120-1258185)
chr6 (207-277)||(1257028-1257098)
chr6 (212-277)||(8752475-8752540)
chr6 (207-277)||(2955918-2955988)
chr6 (68-123)||(19082733-19082788)
chr6 (225-277)||(1443631-1443683)
chr6 (225-277)||(1445026-1445078)
[»] chr1 (39 HSPs)
chr1 (24-359)||(41668296-41668631)
chr1 (68-354)||(19250860-19251154)
chr1 (24-359)||(19249343-19249684)
chr1 (207-357)||(19250749-19250907)
chr1 (24-123)||(7655201-7655300)
chr1 (24-123)||(28920592-28920691)
chr1 (90-287)||(10611592-10611792)
chr1 (24-123)||(16673193-16673292)
chr1 (24-141)||(33259291-33259408)
chr1 (24-141)||(33279450-33279567)
chr1 (24-123)||(36145367-36145466)
chr1 (24-123)||(28919106-28919205)
chr1 (24-123)||(33257904-33258002)
chr1 (24-123)||(33278076-33278174)
chr1 (212-273)||(19250733-19250794)
chr1 (24-123)||(7653709-7653808)
chr1 (24-123)||(36146849-36146947)
chr1 (207-277)||(41668579-41668649)
chr1 (24-138)||(19057789-19057903)
chr1 (24-122)||(50316988-50317086)
chr1 (68-123)||(16672722-16672777)
chr1 (23-123)||(22684087-22684187)
chr1 (24-122)||(24438885-24438984)
chr1 (307-360)||(19250962-19251015)
chr1 (24-60)||(16592044-16592080)
chr1 (225-277)||(23080191-23080243)
chr1 (225-277)||(24437289-24437341)
chr1 (225-277)||(33983215-33983267)
chr1 (176-277)||(50315493-50315594)
chr1 (213-277)||(19249638-19249702)
chr1 (225-277)||(24438740-24438792)
chr1 (238-277)||(41925459-41925498)
chr1 (230-272)||(13210910-13210952)
chr1 (35-122)||(13211050-13211137)
chr1 (187-228)||(41925305-41925346)
chr1 (24-60)||(31321032-31321068)
chr1 (225-277)||(33981774-33981826)
chr1 (225-277)||(50316843-50316895)
chr1 (233-285)||(52896346-52896397)
[»] chr5 (37 HSPs)
chr5 (24-359)||(39101738-39102073)
chr5 (23-358)||(39103113-39103448)
chr5 (24-359)||(8872543-8872877)
chr5 (24-359)||(36620931-36621262)
chr5 (26-359)||(36619569-36619894)
chr5 (24-359)||(8873977-8874310)
chr5 (24-287)||(38624739-38625002)
chr5 (160-357)||(5224886-5225090)
chr5 (33-287)||(11772473-11772727)
chr5 (79-330)||(5225330-5225589)
chr5 (26-123)||(30333944-30334041)
chr5 (24-123)||(1418873-1418972)
chr5 (24-123)||(25916215-25916314)
chr5 (207-277)||(36620913-36620983)
chr5 (207-277)||(39102021-39102091)
chr5 (193-347)||(12251130-12251292)
chr5 (24-123)||(30332306-30332405)
chr5 (216-277)||(36619851-36619912)
chr5 (207-277)||(8872825-8872895)
chr5 (207-277)||(8873959-8874029)
chr5 (24-142)||(17554921-17555040)
chr5 (194-277)||(39103094-39103177)
chr5 (207-276)||(5225040-5225109)
chr5 (307-359)||(11772501-11772553)
chr5 (307-359)||(39103212-39103264)
chr5 (36-140)||(38626090-38626194)
chr5 (69-200)||(12250437-12250567)
chr5 (24-123)||(25914514-25914612)
chr5 (68-123)||(1417477-1417533)
chr5 (33-122)||(27756723-27756812)
chr5 (307-359)||(38624922-38624974)
chr5 (250-287)||(17553284-17553321)
chr5 (307-359)||(5224933-5224985)
chr5 (163-214)||(28592239-28592290)
chr5 (24-122)||(16308588-16308687)
chr5 (307-359)||(5225409-5225461)
chr5 (69-144)||(12251299-12251375)
[»] chr2 (23 HSPs)
chr2 (24-311)||(28563399-28563694)
chr2 (24-287)||(45499328-45499591)
chr2 (24-287)||(40303316-40303579)
chr2 (27-123)||(1841692-1841788)
chr2 (24-123)||(13947771-13947869)
chr2 (24-123)||(14088960-14089058)
chr2 (24-123)||(1840180-1840279)
chr2 (24-140)||(40304682-40304798)
chr2 (24-140)||(45492952-45493068)
chr2 (24-140)||(45500694-45500810)
chr2 (16-138)||(38729984-38730107)
chr2 (69-270)||(44097141-44097342)
chr2 (225-277)||(16142440-16142492)
chr2 (23-122)||(16142248-16142347)
chr2 (307-360)||(28563582-28563635)
chr2 (37-131)||(38728220-38728314)
chr2 (307-359)||(40303499-40303551)
chr2 (307-359)||(45499511-45499563)
chr2 (23-270)||(22053147-22053393)
chr2 (33-115)||(16143541-16143623)
chr2 (229-277)||(38728402-38728450)
chr2 (24-115)||(7317413-7317504)
chr2 (33-138)||(15346896-15347001)
[»] chr7 (46 HSPs)
chr7 (24-287)||(46245145-46245408)
chr7 (69-278)||(30792607-30792821)
chr7 (71-218)||(9532456-9532603)
chr7 (89-359)||(30791335-30791614)
chr7 (69-287)||(15135446-15135664)
chr7 (185-287)||(37132019-37132121)
chr7 (24-123)||(21716556-21716655)
chr7 (24-123)||(40028480-40028579)
chr7 (24-123)||(45276432-45276531)
chr7 (24-123)||(45277904-45278003)
chr7 (212-287)||(31734528-31734603)
chr7 (24-123)||(8231571-8231670)
chr7 (24-119)||(31392081-31392176)
chr7 (24-123)||(31393596-31393695)
chr7 (24-123)||(8230093-8230192)
chr7 (24-123)||(21715095-21715194)
chr7 (24-123)||(4675734-4675832)
chr7 (24-122)||(12180577-12180675)
chr7 (181-287)||(14780601-14780705)
chr7 (181-287)||(15230620-15230724)
chr7 (24-140)||(46246495-46246611)
chr7 (24-123)||(40029966-40030065)
chr7 (191-287)||(11747582-11747672)
chr7 (208-273)||(30791563-30791628)
chr7 (68-123)||(14774579-14774634)
chr7 (68-123)||(15225032-15225087)
chr7 (24-194)||(21914510-21914674)
chr7 (232-359)||(9531770-9531906)
chr7 (307-359)||(46245328-46245380)
chr7 (68-123)||(32881183-32881238)
chr7 (207-277)||(9531854-9531924)
chr7 (176-277)||(11670016-11670117)
chr7 (24-122)||(13420224-13420322)
chr7 (33-141)||(11671205-11671313)
chr7 (70-129)||(21914398-21914457)
chr7 (195-277)||(11748732-11748813)
chr7 (33-248)||(37133461-37133676)
chr7 (33-115)||(12178515-12178597)
chr7 (225-277)||(12180432-12180484)
chr7 (312-359)||(31734556-31734603)
chr7 (68-123)||(32882652-32882707)
chr7 (24-123)||(15136877-15136975)
chr7 (33-123)||(37131867-37131957)
chr7 (307-352)||(37132041-37132086)
chr7 (225-277)||(12178697-12178749)
chr7 (320-360)||(15135597-15135637)
[»] chr3 (25 HSPs)
chr3 (24-287)||(40499025-40499288)
chr3 (24-287)||(31796607-31796870)
chr3 (24-206)||(31656976-31657159)
chr3 (24-287)||(48568303-48568566)
chr3 (24-287)||(41083044-41083307)
chr3 (238-359)||(31657159-31657288)
chr3 (26-123)||(53527995-53528092)
chr3 (207-276)||(31657236-31657305)
chr3 (271-359)||(31658345-31658433)
chr3 (24-123)||(33732988-33733087)
chr3 (24-123)||(33734439-33734538)
chr3 (24-141)||(53529453-53529570)
chr3 (24-140)||(41081825-41081941)
chr3 (24-140)||(31795396-31795512)
chr3 (24-140)||(48567019-48567135)
chr3 (212-277)||(31658327-31658392)
chr3 (307-359)||(40499053-40499105)
chr3 (307-359)||(48568331-48568383)
chr3 (33-141)||(30700328-30700436)
chr3 (176-277)||(41881436-41881537)
chr3 (307-359)||(31796635-31796687)
chr3 (192-272)||(32559111-32559191)
chr3 (307-347)||(41083084-41083124)
chr3 (176-288)||(44458771-44458883)
chr3 (35-113)||(41879958-41880036)
[»] chr8 (13 HSPs)
chr8 (84-360)||(31917062-31917346)
chr8 (24-123)||(25264363-25264462)
chr8 (24-123)||(25265842-25265941)
chr8 (24-123)||(33295383-33295481)
chr8 (70-259)||(41912540-41912729)
chr8 (23-123)||(33293961-33294062)
chr8 (238-359)||(41912736-41912865)
chr8 (212-277)||(31917298-31917363)
chr8 (207-277)||(41912813-41912883)
chr8 (24-122)||(3157975-3158073)
chr8 (24-138)||(39885998-39886112)
chr8 (204-286)||(1649979-1650065)
chr8 (24-138)||(39884639-39884753)
[»] scaffold0633 (1 HSPs)
scaffold0633 (24-128)||(6826-6930)
[»] scaffold0489 (1 HSPs)
scaffold0489 (24-123)||(6752-6851)
[»] scaffold1176 (1 HSPs)
scaffold1176 (23-115)||(2073-2165)


Alignment Details
Target: chr4 (Bit Score: 271; Significance: 1e-151; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 24 - 359
Target Start/End: Complemental strand, 54123581 - 54123246
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||||| ||||||||||||||||||||||||        ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  54123581 tgtaatttggcatgtttttggttttcgtccctgtatatttttttgttctaaaacaactcctgtaagttaataactttttgcttttcgtccctcccgtcaa 54123482  T
Q  124 actctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgacta 223  Q
    |||||||  |||||| ||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54123481 actctgtaacaaaaacgccttgctggctaacggtgagtgacgtggcaggtgctgacttggccaaacacgcttatgtggactgacagatgatccctgacta 54123382  T
Q  224 tattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaatatgaaatttaggtggccttccagaagatccctgacta 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54123381 tattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaatatgaaatttaggtggccttccagaagatccctgacta 54123282  T
Q  324 cattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
     |||||||||||||||||||||||||||||||||||    
T  54123281 tattacagggaccaaaaccaaaaacgaaaagttaca 54123246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 24 - 359
Target Start/End: Complemental strand, 32082669 - 32082332
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||    
T  32082669 tgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttctaaaataacccctgtaagttaataactttttgcttttcgtccctcctgtcaa 32082570  T
Q  124 actctgttgcaaaaatgccttgctggcaaacag--tgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgac 221  Q
    |||||||| |||||| |||||| |||| ||||   ||||| | ||| ||  |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32082569 actctgttacaaaaacgccttgttggctaacaacatgagtaatgtgacacgtgctgacttggctaaacacgcttatgtggactgacagatgatccctgac 32082470  T
Q  222 tatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaatatgaaatttaggtggccttccagaagatccctgac 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32082469 tatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaatatgaaatttaggtggccttctagaagatccctgac 32082370  T
Q  322 tacattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
    || ||||||||||||| |||||||||||||||||||||    
T  32082369 tatattacagggaccagaaccaaaaacgaaaagttaca 32082332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 24 - 360
Target Start/End: Complemental strand, 10338206 - 10337868
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnn--gttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtc 121  Q
    |||||||| |||||||||||||||| ||| |||||||         ||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10338206 tgtaattttgcgtgtttttggtttttgtctctgtatctttttttttgttttaaaacaacccctgtaagttaataactttttgcttttcgtccctcccgtc 10338107  T
Q  122 aaactctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgac 221  Q
    |||||||||| |||||| |||||||| || ||| |||||| || |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10338106 aaactctgttacaaaaacgccttgctagctaacggtgagttacatggcaggtgctgacttggccaaacacgcttatgtgaactgacagatgatccctgac 10338007  T
Q  222 tatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaatatgaaatttaggtggccttccagaagatccctgac 321  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10338006 tatattacagggatcaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaatatgaaaattaggtggccttccagaagatccctgac 10337907  T
Q  322 tacattacagggaccaaaaccaaaaacgaaaagttacaa 360  Q
    || ||||||||||||||||| ||||||||||||||||||    
T  10337906 tatattacagggaccaaaacaaaaaacgaaaagttacaa 10337868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 23 - 359
Target Start/End: Original strand, 42977220 - 42977557
Alignment:
Q  23 ttgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtca 122  Q
    ||||||||||||||||||||||||||||||||||||||       ||||||||||||||| | |||||||||||| ||||||||||||||||||||||||    
T  42977220 ttgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaacccatttaagttaataactttttgcttttcgtccctcccgtca 42977319  T
Q  123 aactctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgact 222  Q
    ||||||||| |||||| ||||||||||| ||| ||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  42977320 aactctgttacaaaaacgccttgctggctaacggtgagtgacttggcaggtgctgacttggtcaaacacgcttatgtggactgacagatgatccttgact 42977419  T
Q  223 atattacagggacc-aaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaatatgaaatttaggtggccttccagaagatccctgac 321  Q
     ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||    
T  42977420 ctattacagggaccaaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacataaatataaaatttaggtggccttctagaagatccatgac 42977519  T
Q  322 tacattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
    || |||| |||||||||||||||||| |||||||||||    
T  42977520 tatattatagggaccaaaaccaaaaatgaaaagttaca 42977557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 23 - 359
Target Start/End: Original strand, 48711880 - 48712216
Alignment:
Q  23 ttgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtca 122  Q
    ||||||||| |||||||||| |||||||||| ||||||       ||||||||| |||||||| ||||| ||||| ||||| ||||||||| ||||||||    
T  48711880 ttgtaattttgcgtgttttttgttttcgtccttgtatctttttttgttctaaaataacccctgcaagttgataacattttgattttcgtccttcccgtca 48711979  T
Q  123 aactctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgact 222  Q
    ||||| ||| |||||| |||||| |||| |||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  48711980 aactcggttacaaaaacgccttgttggctaacagtgagtgacgtggcaagtgctgacttgaccaaacacgcttatgtggactgacagatgatccctgact 48712079  T
Q  223 atattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaatatgaaatttaggtggccttccagaagatccctgact 322  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48712080 atattacagggaccaaaactaaaaatgaaaaggtacatagggacgaaattaaaaacacctaaatatgaaatttaggtggccttccagaagatccctgact 48712179  T
Q  323 acattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
    | |||||| |||||||||||||||||||||| |||||    
T  48712180 agattacatggaccaaaaccaaaaacgaaaaattaca 48712216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 38 - 359
Target Start/End: Original strand, 54121864 - 54122193
Alignment:
Q  38 tttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaaactctgttgcaaaa 137  Q
    ||||| |||||||||||||||||       |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||    
T  54121864 ttttttgttttcgtccctgtatctttttttgttctaaaacaacccctgtaagttaataactttttgcttttcgtccctcccgttaaactctgttacaaaa 54121963  T
Q  138 atgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgactatattacagggacca 237  Q
    | ||||||||| | ||| |||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  54121964 acgccttgctgactaacggtgagtgacgtggcaggtgctgacttggccaaacacacttatgtggattgacagatgattcctgactatattacagggacca 54122063  T
Q  238 aaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaata--------tgaaatttaggtggccttccagaagatccctgactacattac 329  Q
    ||||| |||||||||||||||| |||||| ||||||||||||||||||||        |||||||||||||||||||||||||||||||||||| |||||    
T  54122064 aaaccgaaaacgaaaaggtacatagggacaaaattaaaaacacctaaataataaaatttgaaatttaggtggccttccagaagatccctgactatattac 54122163  T
Q  330 agggaccaaaaccaaaaacgaaaagttaca 359  Q
    ||||||||||||||||||||||||||||||    
T  54122164 agggaccaaaaccaaaaacgaaaagttaca 54122193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 23 - 359
Target Start/End: Complemental strand, 42978956 - 42978612
Alignment:
Q  23 ttgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtca 122  Q
    ||||||||||||||||||||||||||||||||||||||       |||||||||||| || |||||||||||||  ||||||||||||||||||||||||    
T  42978956 ttgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaatccttgtaagttaataattttttgcttttcgtccctcccgtca 42978857  T
Q  123 aactctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgact 222  Q
    ||||||||| |||||| ||||||||||| ||| ||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||| || ||    
T  42978856 aactctgttacaaaaacgccttgctggctaacggtgagtgacttggcaggtgctgacttggtcaaacacgcttatgtggactgacagatgatccttgtct 42978757  T
Q  223 atattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacaccta--------aatatgaaatttaggtggccttccagaagat 314  Q
    |||||| |||||||||||||| ||||||||||||||||| |||| ||||||||||||||||        |||||||||| ||||||||||||||||||||    
T  42978756 atattatagggaccaaaaccagaaacgaaaaggtacagatggacaaaattaaaaacacctaaataacaaaatatgaaatgtaggtggccttccagaagat 42978657  T
Q  315 ccctgactacattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||    
T  42978656 ccctgactatattacagggaccaaaaccaaaaacgaaaaggtaca 42978612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 24 - 359
Target Start/End: Original strand, 10337127 - 10337468
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||||||||||||||| ||||||       |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10337127 tgtaatttggcgtgtttttggttttcgtccttgtatctttttttgttctaaaacaacccctgtaagttaataaccttttgcttttcatccctcccgtcaa 10337226  T
Q  124 actctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgacta 223  Q
    |||||||| |||| | |||||| |||| ||| |||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  10337227 actctgttacaaagacgccttg-tggctaacggtgagtgacgtggcaggtgctgacttggccaaacacgtttatgtggaatgacagatgatccctgacta 10337325  T
Q  224 tattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacct--------aaatatgaaatttaggtggccttccagaagatc 315  Q
    ||||| |||||||||||||||||||||||||||| ||| |||| |||||||||||||||        |||||||||||||||||||||||||||||||||    
T  10337326 tattatagggaccaaaaccaaaaacgaaaaggtataga-ggacaaaattaaaaacacctaaataacaaaatatgaaatttaggtggccttccagaagatc 10337424  T
Q  316 cctgactacattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
     ||||||| ||||||| |||||||||||||||||||||||||||    
T  10337425 tctgactatattacagtgaccaaaaccaaaaacgaaaagttaca 10337468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 24 - 277
Target Start/End: Complemental strand, 48713498 - 48713245
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  48713498 tgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctccagtcaa 48713399  T
Q  124 actctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgacta 223  Q
    |||||||| |||||| ||||||||| | ||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48713398 actctgttacaaaaacgccttgctgactaacggtgagtgacgtagcaggtgctgacttggccaaacacgcttatgtggactgacagatgatccctgacta 48713299  T
Q  224 tattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||||||||||||||||| |||||||||||| |||||| |||||||||||||||    
T  48713298 tattacagggaccaaaactaaaaacgaaaagttacagaaggacgaaattaaaaa 48713245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 72 - 357
Target Start/End: Original strand, 16879229 - 16879521
Alignment:
Q  72 taaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaaactctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcag 171  Q
    |||||| |||| |||||| |||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||| ||| | | |||||||||| |    
T  16879229 taaaaccacccttgtaaggtaataaccttttgcttttcgtccctcccgtcaaaatctgttacaaaaacgccttgctggctaacggcgtgtgacgtggcgg 16879328  T
Q  172 atgctgacttggccaaacacgcttatgtggactgacagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaat 271  Q
     ||||| |||||  |||||||||| |||||||    ||||  ||||| ||||||||| |||||||||||||||| || ||||||||   |||||||||||    
T  16879329 gtgctggcttggttaaacacgcttttgtggacctgtagattttcccttactatattatagggaccaaaaccaaagacaaaaaggtatctagggacgaaat 16879428  T
Q  272 taaaaacacctaaata--------tgaaatttaggtggccttccagaagatccctgactacattacagggaccaaaaccaaaaacgaaaagtta 357  Q
    | ||||||||||||||        ||||||||||||||||||||||| | |||||||||| ||||||| |||||||||||||||| ||||||||    
T  16879429 t-aaaacacctaaataacaaaatttgaaatttaggtggccttccagatggtccctgactatattacagagaccaaaaccaaaaactaaaagtta 16879521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 19994521 - 19994620
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  19994521 tgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaacccctataagttaataactttttgattttcgtccctcccgtcaa 19994620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 55948990 - 55948890
Alignment:
Q  23 ttgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtca 122  Q
    ||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| ||| | ||||| ||||||||||||    
T  55948990 ttgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaacccctgtaagttaataacttttggattttcttccctcccgtca 55948891  T
Q  123 a 123  Q
    |    
T  55948890 a 55948890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 19996090 - 19995991
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||||||||||||||||||| |||||||||||       |||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||    
T  19996090 tgtaatttggcgtgtttttggttttggtccctgtatctttttttgttctaaaacaacccctgtaagttaataactttttgattttcgtccctcccatcaa 19995991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 42978664 - 42978594
Alignment:
Q  207 cagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  42978664 cagaagatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagaaggacgaaattaaaaa 42978594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 44251628 - 44251727
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||||||||||||||| ||||||       ||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||    
T  44251628 tgtaatttggcgtgtttttggttttcgtccttgtatctttttttgttctaaaacaacccttgtaagttaataactttttgattttcgtccctcccgtcaa 44251727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 54123298 - 54123228
Alignment:
Q  207 cagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  54123298 cagaagatccctgactatattacagggaccaaaaccaaaaacgaaaagttacagaaggacgaaattaaaaa 54123228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 44253226 - 44253129
Alignment:
Q  26 taatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||||||||||||||| ||||       ||||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||    
T  44253226 taatttggcgtgtttttggttttcgtccctatatctttttttgttctaaaacaacccctataagttaataactttttgattttcgtctctcccgtcaa 44253129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 18597655 - 18597754
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||| |||||||||||||||||||||||||||        ||||||||||||| | ||||||||||||| ||||| |||||||||||||||||||    
T  18597655 tgtaatttgccgtgtttttggttttcgtccctgtatctttttttattctaaaacaacctccgtaagttaataactttttgattttcgtccctcccgtcaa 18597754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 54122141 - 54122211
Alignment:
Q  207 cagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||    
T  54122141 cagaagatccctgactatattacagggaccaaaaccaaaaacgaaaagttacataaggacgaaattaaaaa 54122211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 10337416 - 10337486
Alignment:
Q  207 cagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||| |||| ||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||    
T  10337416 cagaagatctctgactatattacagtgaccaaaaccaaaaacgaaaagttacagaaggacgaaattaaaaa 10337486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 10337921 - 10337851
Alignment:
Q  207 cagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||| |||| | |||||||||||||||    
T  10337921 cagaagatccctgactatattacagggaccaaaacaaaaaacgaaaagttacaaaaggacgaaattaaaaa 10337851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 55947383 - 55947482
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||| ||| |||||||||||||||||||||||       ||| ||||||| ||||| |||||||||||| ||||| |||||||||||||||||||    
T  55947383 tgtaatttgacgtatttttggttttcgtccctgtatctttttttgttataaaacagcccctataagttaataactttttgattttcgtccctcccgtcaa 55947482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 150
Target Start/End: Complemental strand, 16880470 - 16880399
Alignment:
Q  79 acccctgtaagttaataaccttttgcttttcgtccctcccgtcaaactctgttgcaaaaatgccttgctggc 150  Q
    |||| |||||||||||||| |||||||| |||||||||||||||||||||||| |||||| |||||| ||||    
T  16880470 acccttgtaagttaataactttttgcttatcgtccctcccgtcaaactctgttacaaaaacgccttggtggc 16880399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 53355167 - 53355222
Alignment:
Q  68 gttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  53355167 gttctaaaacaacccctgtaagttaataactttttgattttcgtccctcccgtcaa 53355222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 16879471 - 16879541
Alignment:
Q  207 cagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||||| |||||||||||||||||| |||||||||||||||| ||||| ||  ||||||||||||||||||    
T  16879471 cagatggtccctgactatattacagagaccaaaaccaaaaactaaaagttagcgagggacgaaattaaaaa 16879541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 48712164 - 48712234
Alignment:
Q  207 cagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||| |||||||||||| |||||| ||||||||||||||||||||||  |||||| |||||||||||||||    
T  48712164 cagaagatccctgactagattacatggaccaaaaccaaaaacgaaaaattacagaaggacgaaattaaaaa 48712234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 212 - 277
Target Start/End: Complemental strand, 32082379 - 32082314
Alignment:
Q  212 gatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||| | | |||||||||||    
T  32082379 gatccctgactatattacagggaccagaaccaaaaacgaaaagttacagaagaaagaaattaaaaa 32082314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 48713315 - 48713263
Alignment:
Q  307 cagaagatccctgactacattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
    |||| |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  48713315 cagatgatccctgactatattacagggaccaaaactaaaaacgaaaagttaca 48713263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 277
Target Start/End: Original strand, 42977510 - 42977575
Alignment:
Q  212 gatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    ||||| ||||||||||| |||||||||||||||||| |||||| |||||| |||| ||||| ||||    
T  42977510 gatccatgactatattatagggaccaaaaccaaaaatgaaaagttacagaaggacaaaattgaaaa 42977575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 272
Target Start/End: Original strand, 3069123 - 3069170
Alignment:
Q  225 attacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaatt 272  Q
    |||||||||||||||||||||| ||||||  |||||||||||||||||    
T  3069123 attacagggaccaaaaccaaaaccgaaaaattacagagggacgaaatt 3069170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 18597890 - 18597855
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtat 59  Q
    ||||||||||||||||||||||||||||||||||||    
T  18597890 tgtaatttggcgtgtttttggttttcgtccctgtat 18597855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 33609228 - 33609153
Alignment:
Q  174 gctgacttggccaaacacgcttatgtggactgacagatgatccctgactatattacagggaccaaaaccaaaaacg 249  Q
    |||||| |||| ||||||||||||||| |||||||||| ||   |||||| |||  ||||||||||||||||||||    
T  33609228 gctgacatggcaaaacacgcttatgtgtactgacagatcataagtgactagatttgagggaccaaaaccaaaaacg 33609153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 22307706 - 22307808
Alignment:
Q  36 tgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaaactctgttgcaa 135  Q
    ||||||||||||| |||||||||||       ||||||||||||||| |||||||||  | | ||||| |||| |||||| |||||| | |||||| |||    
T  22307706 tgtttttggttttagtccctgtatcgttttttgttctaaaacaacccttgtaagttataagcattttggttttagtccctgccgtcataatctgttacaa 22307805  T
Q  136 aaa 138  Q
    |||    
T  22307806 aaa 22307808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 42226679 - 42226630
Alignment:
Q  99 ttttgcttttcgtccctcccgtcaaactctgttgcaaaaatgccttgctg 148  Q
    ||||||||||||||||||||||||| |||| || |||||| |||||||||    
T  42226679 ttttgcttttcgtccctcccgtcaatctctattacaaaaacgccttgctg 42226630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 36887152 - 36887204
Alignment:
Q  225 attacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||||||||||||||||| ||||  ||||| |||||| |||||||||||||||    
T  36887152 attacagggaccaaaacccaaaataaaaagttacagatggacgaaattaaaaa 36887204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 21354803 - 21354723
Alignment:
Q  33 gcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtcc 113  Q
    ||||||||||| ||||||||||||||||       |||||||||||| |||||||||||  |||| ||||| |||| ||||    
T  21354803 gcgtgtttttgattttcgtccctgtatctttttttgttctaaaacaaaccctgtaagttgttaactttttggttttagtcc 21354723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 24919075 - 24919143
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagtta 92  Q
    ||||| || ||||||||||||| ||||| ||||||||       |||||||||||||||||||||||||    
T  24919075 tgtaagtttgcgtgtttttggtcttcgttcctgtatctttttttgttctaaaacaacccctgtaagtta 24919143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 69 - 120
Target Start/End: Complemental strand, 39654665 - 39654614
Alignment:
Q  69 ttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgt 120  Q
    ||||||||||| || ||||||||  |||||||||| ||||||||||||||||    
T  39654665 ttctaaaacaaaccatgtaagttgttaaccttttggttttcgtccctcccgt 39654614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 138
Target Start/End: Complemental strand, 42889836 - 42889733
Alignment:
Q  34 cgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaaactctgttgc 133  Q
    ||||||||| |||||||||| ||||||       |||||||||||  || |||||||||  ||| |||||||||| |||||| ||||| ||||||||| |    
T  42889836 cgtgttttttgttttcgtccttgtatctttttttgttctaaaacagaccatgtaagttataaacattttgcttttggtccctgccgtc-aactctgttac 42889738  T
Q  134 aaaaa 138  Q
    |||||    
T  42889737 aaaaa 42889733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 263; Significance: 1e-146; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 24 - 359
Target Start/End: Original strand, 8745455 - 8745790
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||||||||||||||||| ||||       |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  8745455 tgtaatttggcgtgtttttggttttcgtccctatatctttttttgttctaaaacaacccccgtaagttaataactttttgcttttcgtccctcccgtcaa 8745554  T
Q  124 actctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgacta 223  Q
    |||||||| |||||| ||||||||||| ||| |||||||| ||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  8745555 actctgttacaaaaacgccttgctggctaacggtgagtgatgtggcaggtgctaacttggccaaacacgcttatgtggactgacggatgatccctgacta 8745654  T
Q  224 tattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaatatgaaatttaggtggccttccagaagatccctgacta 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8745655 tattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaatcacctaaatatgaaatttaggtggccttccagaagatccctgacta 8745754  T
Q  324 cattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
     |||||||||||||||||||||||||||||||||||    
T  8745755 tattacagggaccaaaaccaaaaacgaaaagttaca 8745790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 23 - 359
Target Start/End: Original strand, 1256736 - 1257080
Alignment:
Q  23 ttgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtca 122  Q
    ||||||||||||||||||||||||||||||||||||||        |||||||||||||||| |||||||||||| |||| |||||||||||||||||||    
T  1256736 ttgtaatttggcgtgtttttggttttcgtccctgtatctttttttattctaaaacaacccctataagttaataactttttacttttcgtccctcccgtca 1256835  T
Q  123 aactctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgact 222  Q
    ||||||||| |||||||||||||||| | ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1256836 aactctgttacaaaaatgccttgctgactaacggtgagtgacgtggcaggtgctgacttggccaaacacgcttatgtggactgacagatgatccctgact 1256935  T
Q  223 atattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacct--------aaatatgaaatttaggtggccttccagaagat 314  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||        ||||||||||||||||||||||||||||||||    
T  1256936 atattacagggaccaaaaccaaaaacgaaaaggtacagagggacaaaattaaaaacacctaaataacaaaatatgaaatttaggtggccttccagaagat 1257035  T
Q  315 ccctgactacattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
     |||||||| ||||||||||||||||| |||||||||||||||||    
T  1257036 tcctgactatattacagggaccaaaacaaaaaacgaaaagttaca 1257080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 24 - 359
Target Start/End: Complemental strand, 1258476 - 1258138
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataacctttt-gcttttcgtccctcccgtca 122  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||| || |||||||| ||||| ||||||||||||||||||||    
T  1258476 tgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaacccctataggttaataaactttttgcttttcgtccctcccgtca 1258377  T
Q  123 aactctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgact 222  Q
    ||||||||| |||||| ||||| ||| | ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  1258376 aactctgttacaaaaacgccttcctgactaacggtgagtgacgtggcaggtgctgacttggccaaacacgcttatgtggactgacagatgatccctgacc 1258277  T
Q  223 --atattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaatatgaaatttaggtggccttccagaagatccctga 320  Q
      ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  1258276 tcatattacagggaccaaagccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaatatgaaatttaggtggccttccaaaagatcactga 1258177  T
Q  321 ctacattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
    ||| |||||||||||||||||||||||||||||||||||    
T  1258176 ctatattacagggaccaaaaccaaaaacgaaaagttaca 1258138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 24 - 359
Target Start/End: Complemental strand, 2956271 - 2955936
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||  ||||||||||||||||||| ||||||       ||||||||||||| || ||||||||||||| |||||||||||||||||||||||||    
T  2956271 tgtaatttgatgtgtttttggttttcgtccttgtatctttttttgttctaaaacaactcccgtaagttaataactttttgcttttcgtccctcccgtcaa 2956172  T
Q  124 actctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgacta 223  Q
    |||||||| |||||| ||||| ||| | ||   ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2956171 actctgttacaaaaacgccttactgactaaagatgagtgacgtggcaggtgctgacttggccaaacacgcttatgtggactgacagatgatccctgacta 2956072  T
Q  224 tattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaatatgaaatttaggtggccttccagaagatccctgacta 323  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2956071 tattacagggaccaaaaccaaaaacaaaaaggtacagagggacgaaattaaaaacacataaatatgaaatttaggtggccttccagaagatccctgacta 2955972  T
Q  324 cattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
     |||||| ||||||||||||||||||||||||||||    
T  2955971 tattacatggaccaaaaccaaaaacgaaaagttaca 2955936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 24 - 359
Target Start/End: Complemental strand, 8752836 - 8752493
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||||||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8752836 tgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaacccctgcaagttaataaccttttgcttttcgtccctcccgtcaa 8752737  T
Q  124 actctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgacta 223  Q
    ||| |||| |||||| | ||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8752736 actttgttacaaaaacgtcttgctggctaacggtgagtgacgtggcagatgctgacttggccaaacacgtttatgtggactgacagatgatccctgacta 8752637  T
Q  224 tattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacaccta--------aatatgaaatttaggtggccttccagaagatc 315  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||        |||||||||||||||| |||||||| ||||||    
T  8752636 tattacagggaccaaaaccaaaaacgaaaaagtacagagggacaaaattaaaaacacctaaataacaaaatatgaaatttaggttgccttccaaaagatc 8752537  T
Q  316 cctgactacattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
    | |||||| |||||| ||||||||||||||||||||||||||||    
T  8752536 cttgactatattacaaggaccaaaaccaaaaacgaaaagttaca 8752493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 237 - 359
Target Start/End: Original strand, 8752003 - 8752125
Alignment:
Q  237 aaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaatatgaaatttaggtggccttccagaagatccctgactacattacagggacc 336  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8752003 aaaaccaaaaacgaaaaggtacagagggacgaaattaaaatcacctaaatatgaaatttaggtggccttccagaagatccctgactatattacagggacc 8752102  T
Q  337 aaaaccaaaaacgaaaagttaca 359  Q
    |||||||||||||||||||||||    
T  8752103 aaaaccaaaaacgaaaagttaca 8752125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 8745738 - 8745808
Alignment:
Q  207 cagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  8745738 cagaagatccctgactatattacagggaccaaaaccaaaaacgaaaagttacagaaggacgaaattaaaaa 8745808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 8752073 - 8752143
Alignment:
Q  207 cagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  8752073 cagaagatccctgactatattacagggaccaaaaccaaaaacgaaaagttacagaaggacgaaattaaaaa 8752143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 19084156 - 19084057
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||| |||||||||||||||| |||||||||||       |||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||    
T  19084156 tgtaatttagcgtgtttttggtttttgtccctgtatctttttttgttctaaaacaacccctgtatgttaataactttttgattttcgtccctcccgtcaa 19084057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 212 - 277
Target Start/End: Complemental strand, 1258185 - 1258120
Alignment:
Q  212 gatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  1258185 gatcactgactatattacagggaccaaaaccaaaaacgaaaagttacagaaggacgaaattaaaaa 1258120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 1257028 - 1257098
Alignment:
Q  207 cagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||| ||| |||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||    
T  1257028 cagaagattcctgactatattacagggaccaaaacaaaaaacgaaaagttacagaaggacgaaattaaaaa 1257098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 212 - 277
Target Start/End: Complemental strand, 8752540 - 8752475
Alignment:
Q  212 gatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||    
T  8752540 gatccttgactatattacaaggaccaaaaccaaaaacgaaaagttacagaaggacgaaattaaaaa 8752475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 2955988 - 2955918
Alignment:
Q  207 cagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||| |||| |  ||||||||||||||    
T  2955988 cagaagatccctgactatattacatggaccaaaaccaaaaacgaaaagttacataatgacgaaattaaaaa 2955918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 19082733 - 19082788
Alignment:
Q  68 gttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||||||||| | |||||||||||| ||||| |||||||||||||||||||    
T  19082733 gttctaaaacaacccatataagttaataactttttgattttcgtccctcccgtcaa 19082788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 1443631 - 1443683
Alignment:
Q  225 attacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||||||||||||||| ||||||||||||  |||| |||||||||||||||||    
T  1443631 attacagggaccaaaatcaaaaacgaaaaattacatagggacgaaattaaaaa 1443683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 1445078 - 1445026
Alignment:
Q  225 attacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||||||||| ||||| ||||||||||||  ||||||||||||||||| ||||    
T  1445078 attacagggatcaaaatcaaaaacgaaaaattacagagggacgaaattcaaaa 1445026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 255; Significance: 1e-142; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 24 - 359
Target Start/End: Original strand, 41668296 - 41668631
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||||||||||||||||||||||| ||||||        |||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||    
T  41668296 tgtaatttggcgtgtttttggttttcgtctctgtatatttttttgttctaaaacaacctctgtaagttaataactttttgcttttcgtctctcccgtcaa 41668395  T
Q  124 actctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgacta 223  Q
    |||||||| ||||||  |||||||||| ||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41668396 actctgttacaaaaacaccttgctggctaacggtgagtgatgtggcaggtgctgacttggccaaacacgcttatgtggactgacagatgatccctgacta 41668495  T
Q  224 tattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaatatgaaatttaggtggccttccagaagatccctgacta 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41668496 tattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaatatgaaatttaggtggccttccagaagatccctgacta 41668595  T
Q  324 cattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
     ||||||| |||||||||||||||||||| ||||||    
T  41668596 tattacagtgaccaaaaccaaaaacgaaatgttaca 41668631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 68 - 354
Target Start/End: Complemental strand, 19251154 - 19250860
Alignment:
Q  68 gttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaaactctgttgcaaaaatgccttgctggcaaacagtgagtgacgtg 167  Q
    ||||||||||||||||||||| |||||||  ||||||||||||||||||| ||||||||||||| |||||| | ||||||||| ||||| |  |||||||    
T  19251154 gttctaaaacaacccctgtaaattaataattttttgcttttcgtccctccagtcaaactctgttacaaaaacgtcttgctggctaacagcgtatgacgtg 19251055  T
Q  168 gcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacg 267  Q
    |||| |||||||||||  || ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  19251054 gcaggtgctgacttggttaatcacgcttatatggactgacagatgatccctgactatattacagggaccaaaatcaaaaacgaaaaggtacaaagggacg 19250955  T
Q  268 aaattaaaaacacctaaata--------tgaaatttaggtggccttccagaagatccctgactacattacagggaccaaaaccaaaaacgaaaag 354  Q
    ||||||||||||||||||||        ||||||||||||| ||| ||||||||||||| |||| |||||| |||||||||||||||||||||||    
T  19250954 aaattaaaaacacctaaataacaaaatttgaaatttaggtgacctaccagaagatccctaactatattacatggaccaaaaccaaaaacgaaaag 19250860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 24 - 359
Target Start/End: Original strand, 19249343 - 19249684
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||||  |||||||||||||||||  ||||||       |||||||||||||||| ||||||||||||| ||||||||||||||||| |||| ||    
T  19249343 tgtaatttggattgtttttggttttcgtctttgtatctttttttgttctaaaacaaccccggtaagttaataac-ttttgcttttcgtcccttccgtaaa 19249441  T
Q  124 actctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgacta 223  Q
    |||||||| |||||   ||||| |||| ||  | | ||||||| || | |||||||||||| || || |||| |||||| ||||| ||||||||||||||    
T  19249442 actctgttacaaaaca-ccttgatggctaatggcgtgtgacgtcgcgggtgctgacttggctaagcatgcttgtgtggaatgacatatgatccctgacta 19249540  T
Q  224 tattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacct--------aaatatgaaatttaggtggccttccagaagatc 315  Q
    ||||||| ||||||| |  ||||| ||||||||||| ||||||||||||||||||||||        |||| |||||||||||||||||| || |  |||    
T  19249541 tattacaaggaccaacataaaaaatgaaaaggtacatagggacgaaattaaaaacacctaaacaacaaaatttgaaatttaggtggcctttcaaattatc 19249640  T
Q  316 cctgactacattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
    |||||||| ||||| |||| ||| ||||||| | ||||||||||    
T  19249641 cctgactatattactgggatcaagaccaaaagcaaaaagttaca 19249684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 207 - 357
Target Start/End: Complemental strand, 19250907 - 19250749
Alignment:
Q  207 cagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaatta-aaaacacctaaata--------tgaaatttag 297  Q
    |||| ||||||| ||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||        |||||| |||    
T  19250907 cagaagatccctaactatattacatggaccaaaaccaaaaacgaaaaggtatagagggaggaaattaaaaaacacctaaataacacaatttgaaatgtag 19250808  T
Q  298 gtggccttccagaagatccctgactacattacagggaccaaaaccaaaaacgaaaagtta 357  Q
    || ||||| || |||||||||||||| |||||||||||||||||||||||||||||||||    
T  19250807 gttgccttaca-aagatccctgactatattacagggaccaaaaccaaaaacgaaaagtta 19250749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 7655300 - 7655201
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  7655300 tgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaacccctgtaagttaataactttttgattttcgtccctcccgtcaa 7655201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 28920691 - 28920592
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||||||||||||| ||||| |||||||||||       |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28920691 tgtaatttggcgtgttttttgtttttgtccctgtatctttttttgttctaaaacaacccctgtaagttaataaccttttgattttcgtccctcccgtcaa 28920592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 90 - 287
Target Start/End: Complemental strand, 10611792 - 10611592
Alignment:
Q  90 ttaataaccttttgcttttcgtccctcccgtcaaactctgttgcaaaaatgccttgctggcaaaca----gtga-gtga-cgtggcagatgctgacttgg 183  Q
    |||||||  |||||||||| ||||||||||| |||||||||| ||||||  |||||||||| |||     |||| |||  |||||||| ||||||||| |    
T  10611792 ttaataattttttgctttttgtccctcccgttaaactctgttacaaaaactccttgctggctaacgacatgtgacgtgggcgtggcaggtgctgacttag 10611693  T
Q  184 ccaaacacgcttatgtggactgacagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacaccta 283  Q
    | |||||| ||||| ||||||| |||||||||||||||||||    |  |||||||| |||||||||||||||||| | ||||||||||||||| |||||    
T  10611692 ctaaacacacttatatggactggcagatgatccctgactatag---atagaccaaaatcaaaaacgaaaaggtacaaaaggacgaaattaaaaagaccta 10611596  T
Q  284 aata 287  Q
    ||||    
T  10611595 aata 10611592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 16673292 - 16673193
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||| ||||||||||||||||||||||||||||       ||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  16673292 tgtaattttgcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaacccctataagttaataactttttgattttcgtccctcccgtcaa 16673193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 24 - 141
Target Start/End: Complemental strand, 33259408 - 33259291
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||||||||||||||||||||||       ||| ||||||||||||| |||||||||||| ||||  |||||||||||||||||||    
T  33259408 tgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttttaaaacaacccctataagttaataactttttaattttcgtccctcccgtcaa 33259309  T
Q  124 actctgttgcaaaaatgc 141  Q
      || ||| |||||||||    
T  33259308 cttccgttacaaaaatgc 33259291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 24 - 141
Target Start/End: Complemental strand, 33279567 - 33279450
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||||||||||||||||||||||       ||| ||||||||||||| |||||||||||| ||||  |||||||||||||||||||    
T  33279567 tgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttttaaaacaacccctataagttaataactttttaattttcgtccctcccgtcaa 33279468  T
Q  124 actctgttgcaaaaatgc 141  Q
      || ||| |||||||||    
T  33279467 cttccgttacaaaaatgc 33279450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 36145367 - 36145466
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||||||| ||||| |||||||||||||||||       ||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  36145367 tgtaatttggcgtattttttgttttcgtccctgtatctttttttgttctaaaacaacccctataagttaataactttttgattttcgtccctcccgtcaa 36145466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 28919106 - 28919205
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||||| ||||| ||||||||||       ||||||||||||||||| |||||||||||| ||||| ||||||||||| |||||||    
T  28919106 tgtaatttggcgtgtttttgattttcatccctgtatctttttttgttctaaaacaacccctataagttaataactttttgattttcgtcccttccgtcaa 28919205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 33257904 - 33258002
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||||||||||||||||||| |||| ||||||       ||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||    
T  33257904 tgtaatttggcgtgtttttggtttttgtccttgtatctttttttgttctaaaacaaccc-tgtaagttaataactttttgattttcgtccctcccgtcaa 33258002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 33278076 - 33278174
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||||||||||||||||||| |||| ||||||       ||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||    
T  33278076 tgtaatttggcgtgtttttggtttttgtccttgtatctttttttgttctaaaacaaccc-tgtaagttaataactttttgattttcgtccctcccgtcaa 33278174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 19250794 - 19250733
Alignment:
Q  212 gatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaatta 273  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  19250794 gatccctgactatattacagggaccaaaaccaaaaacgaaaagttatagagggacgaaatta 19250733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 7653709 - 7653808
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||||||| ||||| |||||||||||||||||       ||||||||||| ||||| |||||||||||| ||||| |||| ||||||||||||||    
T  7653709 tgtaatttggcgtattttttgttttcgtccctgtatctttttttgttctaaaacagcccctataagttaataactttttgatttttgtccctcccgtcaa 7653808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 36146947 - 36146849
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||| |||||||||||||||||||| ||||||       |||||||||||| || |||||||||||||| ||||| |||||||||||||||||||    
T  36146947 tgtaatttgacgtgtttttggttttcgtcc-tgtatctttttttgttctaaaacaatccatgtaagttaataactttttgattttcgtccctcccgtcaa 36146849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 41668579 - 41668649
Alignment:
Q  207 cagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||| |||||||||||||||||||| |||||||||||||||||||| | |||||| |||||||||||||||    
T  41668579 cagaagatccctgactatattacagtgaccaaaaccaaaaacgaaatgttacagaaggacgaaattaaaaa 41668649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 138
Target Start/End: Complemental strand, 19057903 - 19057789
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||||||||||||| |||||||| | ||||||       ||||||||||||||||| |||||||||||| ||||  ||||||||||| |||||||    
T  19057903 tgtaatttggcgtgtttttagttttcgttcatgtatctttttttgttctaaaacaacccctataagttaataacttttttattttcgtcccttccgtcaa 19057804  T
Q  124 actctgttgcaaaaa 138  Q
      |||||| ||||||    
T  19057803 cttctgttacaaaaa 19057789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 50317086 - 50316988
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtca 122  Q
    ||||| || ||||||||||| ||||||||||||||||       |||||||||||| ||||||||||||  ||| ||||| ||||||||||||||||||    
T  50317086 tgtaagttcgcgtgtttttgattttcgtccctgtatctttttttgttctaaaacaaaccctgtaagttacaaacgttttgattttcgtccctcccgtca 50316988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 16672722 - 16672777
Alignment:
Q  68 gttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||||||||||| |||||||||||| ||||| ||| |||||||||||||||    
T  16672722 gttctaaaacaacccctataagttaataactttttgatttccgtccctcccgtcaa 16672777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 22684187 - 22684087
Alignment:
Q  23 ttgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtca 122  Q
    |||||| || ||||||||||||||||||||| ||||||       |||||||||||| |||||||| || ||||| |||||  |||||||||| ||||||    
T  22684187 ttgtaagttcgcgtgtttttggttttcgtccatgtatctttttttgttctaaaacaaaccctgtaaattgataactttttgaatttcgtccctaccgtca 22684088  T
Q  123 a 123  Q
    |    
T  22684087 a 22684087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 24438984 - 24438885
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnn-gttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtca 122  Q
    ||||| || ||||||||||||||||||||||||||||        |||||||||||| ||||||||||||  ||| ||||| |||||||||| |||||||    
T  24438984 tgtaaattcgcgtgtttttggttttcgtccctgtatcttttttttgttctaaaacaaaccctgtaagttacaaacgttttgattttcgtcccacccgtca 24438885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 360
Target Start/End: Complemental strand, 19251015 - 19250962
Alignment:
Q  307 cagaagatccctgactacattacagggaccaaaaccaaaaacgaaaagttacaa 360  Q
    |||| |||||||||||| |||||||||||||||| ||||||||||||| |||||    
T  19251015 cagatgatccctgactatattacagggaccaaaatcaaaaacgaaaaggtacaa 19250962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 16592044 - 16592080
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatc 60  Q
    |||||||||||||||||||||||||||||||||||||    
T  16592044 tgtaatttggcgtgtttttggttttcgtccctgtatc 16592080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 23080191 - 23080243
Alignment:
Q  225 attacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||||||||||||||||| ||||| ||||| ||||||||||||| ||||||||    
T  23080191 attacagggaccaaaacccaaaacaaaaagttacagagggacgatattaaaaa 23080243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 24437289 - 24437341
Alignment:
Q  225 attacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||||||||||||||| ||||||||||||  |||| |||||||||||||||||    
T  24437289 attacagggaccaaaatcaaaaacgaaaaattacatagggacgaaattaaaaa 24437341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 33983267 - 33983215
Alignment:
Q  225 attacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||||||||||||||| ||||||||||||  || |||||||||||||||||||    
T  33983267 attacagggaccaaaatcaaaaacgaaaaattagagagggacgaaattaaaaa 33983215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 50315493 - 50315594
Alignment:
Q  176 tgacttggccaaacacgcttatgtggactgacagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaa 275  Q
    |||| |||| |||||| |||||||| |||||||||||||   ||| || |||  |||||||||||||||||||| |||  | |||||||| |||||| ||    
T  50315493 tgacatggcaaaacacacttatgtgtactgacagatgataagtgattagatttgagggaccaaaaccaaaaacgcaaaattgcagagggatgaaattgaa 50315592  T
Q  276 aa 277  Q
    ||    
T  50315593 aa 50315594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 277
Target Start/End: Original strand, 19249638 - 19249702
Alignment:
Q  213 atccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    ||||||||||||||||| |||| ||| ||||||| | ||||| ||||||||||| ||||| ||||    
T  19249638 atccctgactatattactgggatcaagaccaaaagcaaaaagttacagagggacaaaatttaaaa 19249702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 24438792 - 24438740
Alignment:
Q  225 attacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||||| ||||||||| ||||||||||||  ||||||||||||||||| ||||    
T  24438792 attacaaggaccaaaatcaaaaacgaaaaattacagagggacgaaattcaaaa 24438740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 238 - 277
Target Start/End: Original strand, 41925459 - 41925498
Alignment:
Q  238 aaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    ||||||||||||||||| ||||||| ||||||||||||||    
T  41925459 aaaccaaaaacgaaaagttacagagagacgaaattaaaaa 41925498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Complemental strand, 13210952 - 13210910
Alignment:
Q  230 agggaccaaaaccaaaaacgaaaaggtacagagggacgaaatt 272  Q
    ||||||||||||||||||||||||  ||||||||||| |||||    
T  13210952 agggaccaaaaccaaaaacgaaaatttacagagggacaaaatt 13210910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 13211137 - 13211050
Alignment:
Q  35 gtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtca 122  Q
    ||||||||||||||||||||||||||       |||||||||||  ||||||||||||  ||  ||||||||||  ||||| ||||||    
T  13211137 gtgtttttggttttcgtccctgtatctctttttgttctaaaacagaccctgtaagttataaatgttttgcttttattccctgccgtca 13211050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 41925305 - 41925346
Alignment:
Q  187 aacacgcttatgtggactgacagatgatccctgactatatta 228  Q
    ||||| |||||||| ||||||||||||||||| |||||||||    
T  41925305 aacactcttatgtgaactgacagatgatccctaactatatta 41925346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 31321032 - 31321068
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatc 60  Q
    ||||| || ||||||||||||||||||||||||||||    
T  31321032 tgtaagttcgcgtgtttttggttttcgtccctgtatc 31321068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 33981774 - 33981826
Alignment:
Q  225 attacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||||||| |||||||  | |||||||||  ||||||||||||||||||||||    
T  33981774 attacaggaaccaaaataacaaacgaaaaattacagagggacgaaattaaaaa 33981826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 50316895 - 50316843
Alignment:
Q  225 attacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||| |||| |||||| ||||||||||||  |||| |||||||||||||||||    
T  50316895 attatagggtccaaaatcaaaaacgaaaaattacatagggacgaaattaaaaa 50316843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 285
Target Start/End: Original strand, 52896346 - 52896397
Alignment:
Q  233 gaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaa 285  Q
    ||||||||||||||||| ||||||||||| ||| | |||||||||||| ||||    
T  52896346 gaccaaaaccaaaaacg-aaaggtacagaaggatggaattaaaaacacgtaaa 52896397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 251; Significance: 1e-139; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 24 - 359
Target Start/End: Original strand, 39101738 - 39102073
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||| | |||||||||||||||  |||| ||       |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  39101738 tgtaatttggtgcgtttttggttttcgtttctgtgtctttttttgttctaaaacaacccctgtatgttaataactttttgcttttcgtccctcccgtcaa 39101837  T
Q  124 actctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgacta 223  Q
    |||||||| |||||| ||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39101838 actctgttacaaaaacgccttgctggctaacggtgagtgacgtggcaggtgctgacttggccaaacacgcttatgtagactgacagatgatccctgacta 39101937  T
Q  224 tattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaatatgaaatttaggtggccttccagaagatccctgacta 323  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39101938 tattacaaggactaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaatatgaaatttaggtggccttccagaagatccctgacta 39102037  T
Q  324 cattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
     |||||||||||||||||||||||||||||||||||    
T  39102038 tattacagggaccaaaaccaaaaacgaaaagttaca 39102073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 23 - 358
Target Start/End: Complemental strand, 39103448 - 39103113
Alignment:
Q  23 ttgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtca 122  Q
    ||||||||||||||||||||||||||||| || |||||       ||||||||||||||| | |||||||||||| |||||| |||||||||||||||||    
T  39103448 ttgtaatttggcgtgtttttggttttcgttccagtatctttttttgttctaaaacaacccgtataagttaataactttttgcgtttcgtccctcccgtca 39103349  T
Q  123 aactctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgact 222  Q
    |||||| || |||||| ||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39103348 aactctattacaaaaacgccttgctggctaacggtgagtgacgtggcaggtgctgacttggccaaacacgcttatgtggactgacagatgatccctgact 39103249  T
Q  223 atattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaatatgaaatttaggtggccttccagaagatccctgact 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  39103248 atattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaatatgaaatttatgtggccttccagaagattcctgact 39103149  T
Q  323 acattacagggaccaaaaccaaaaacgaaaagttac 358  Q
    | ||||||||||||||||||||||| ||||||||||    
T  39103148 atattacagggaccaaaaccaaaaatgaaaagttac 39103113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 24 - 359
Target Start/End: Original strand, 8872543 - 8872877
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||||||||||||| ||||||||       ||||||||||||||||  |||||||||||| |||||||||||||||| ||||||||    
T  8872543 tgtaatttggcgtgtttttggttttcgttcctgtatctttttttgttctaaaacaacccccataagttaataactttttgcttttcgtccc-cccgtcaa 8872641  T
Q  124 actctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgacta 223  Q
    |||||||| |||||| ||||||||| | ||| |||||||| ||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  8872642 actctgttacaaaaacgccttgctgactaacggtgagtgatgtggcaggtgctaacttggccaaacacgcttacgtggactgacagatgatccctgacta 8872741  T
Q  224 tattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaatatgaaatttaggtggccttccagaagatccctgacta 323  Q
    ||||||||||||||||||||||||| ||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8872742 tattacagggaccaaaaccaaaaacaaaaaggtacggagggaaggaattaaaaacacctaaatatgaaatttaggtggcctttcagaagatccctgacta 8872841  T
Q  324 cattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
     |||||||||||||||| ||||||||||||||||||    
T  8872842 tattacagggaccaaaatcaaaaacgaaaagttaca 8872877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 24 - 359
Target Start/End: Complemental strand, 36621262 - 36620931
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||| | || ||||||||||||||  |||||       ||||||||||||||| ||||  |||||||| |||||||||||||||||||||||||    
T  36621262 tgtaatttggtgcgtctttggttttcgtccacgtatctttttttgttctaaaacaacccttgtacattaataactttttgcttttcgtccctcccgtcaa 36621163  T
Q  124 actctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgacta 223  Q
    |||||||| |||||| ||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||| |||| ||    ||||||||||||    
T  36621162 actctgttacaaaaacgccttgctggctaacggtgagtgacgtggcaggtgctgacttggccaaacacgcttatgtagactaac----gatccctgacta 36621067  T
Q  224 tattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaatatgaaatttaggtggccttccagaagatccctgacta 323  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36621066 tattacagggaccaaaatcaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaatatgaaatttaggtggccttccagaagatccctgacta 36620967  T
Q  324 cattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
     |||||||||||||||||||||||||||||||||||    
T  36620966 tattacagggaccaaaaccaaaaacgaaaagttaca 36620931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 26 - 359
Target Start/End: Original strand, 36619569 - 36619894
Alignment:
Q  26 taatttggcgtgtttttggttttcgtccctgtatcnnnnnnn-gttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaaa 124  Q
    |||||||||||||||||| ||||||||||||||||        ||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||    
T  36619569 taatttggcgtgtttttgattttcgtccctgtatcttttttttgttctaaaacaacccctataagttaatagctttttgcttttcgtccctcccgtcaaa 36619668  T
Q  125 ctctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgactat 224  Q
    ||||||| |||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  36619669 ctctgttacaaaaatgccttgctggctaacggtgagtgacgtggcaggtgctgacttggccaaacacgcttatgtggactgacagacgatccctgactat 36619768  T
Q  225 attacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaatatgaaatttaggtggccttccagaagatccctgactac 324  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||         | ||||||||     
T  36619769 attacagggaccaaaaccaaaaacaaaaaggtaaagagggacgaaattaaaaacacctaaatatgaaatttaggtggcct---------ttcctgactat 36619859  T
Q  325 attacagggaccaaaaccaaaaacgaaaagttaca 359  Q
    |||||||||||||||||||||||||||||||||||    
T  36619860 attacagggaccaaaaccaaaaacgaaaagttaca 36619894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 24 - 359
Target Start/End: Complemental strand, 8874310 - 8873977
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||| | ||||||||||||||||||||||||        |||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||    
T  8874310 tgtaatttgacctgtttttggttttcgtccctgtatatttttttgttctaaaacaacccctgtaagttaataactttttgctttttgtccctctcgtcaa 8874211  T
Q  124 actctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgacta 223  Q
    |||||||| |||||||| ||||||||| ||| |||||||||||||||| |||||| || |||||||||||||||||||||||| ||||||||||||||||    
T  8874210 actctgttacaaaaatgtcttgctggctaacggtgagtgacgtggcaggtgctgattttgccaaacacgcttatgtggactgatagatgatccctgacta 8874111  T
Q  224 tattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacct--------aaatatgaaatttaggtggccttccagaagatc 315  Q
    |||||||||||||      ||||||||||||||||||||||    ||||||||||||||        |||||||||||||||||||||||||||||||||    
T  8874110 tattacagggacc------aaaaacgaaaaggtacagaggg----aattaaaaacacctgaataacaaaatatgaaatttaggtggccttccagaagatc 8874021  T
Q  316 cctgactacattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
    |||||||| ||||||||||||||||||| |||| ||||||||||    
T  8874020 cctgactatattacagggaccaaaaccagaaacaaaaagttaca 8873977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 24 - 287
Target Start/End: Original strand, 38624739 - 38625002
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||| || |||||||||||||||||||||| |||||       ||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  38624739 tgtaagttcgcgtgtttttggttttcgtccccgtatctttttttgttctaaaacaacccctataagttaataactttttgattttcgtccctcccgtcaa 38624838  T
Q  124 actctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgacta 223  Q
      || ||| |||||| |||| |||| | ||| | |  ||| |||||| | | |||  |||| ||| |||||||||||   |||||||||||| |||||||    
T  38624839 cttccgttacaaaaacgcctcgctgtctaacggcggctgatgtggcaaaggatgatgtggcaaaaaacgcttatgtgtcgtgacagatgatctctgacta 38624938  T
Q  224 tattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaata 287  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  38624939 tattacagggaccaaaaccaaaaacgaaaaggtacatagggacgaaattaaaaacacctaaata 38625002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 160 - 357
Target Start/End: Original strand, 5224886 - 5225090
Alignment:
Q  160 gtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtaca 259  Q
    ||||||||| || |||| ||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  5224886 gtgacgtgggaggtgctaacttggctaaacacgcttatgtggactaacagatgatccatgactatattacagggaccaaaaccaaaaactaaaaggtaca 5224985  T
Q  260 gagggacgaaattaaaaacacct-------aaatatgaaatttaggtggccttccagaagatccctgactacattacagggaccaaaaccaaaaacgaaa 352  Q
    |||||||||||||||||||||||       |||| ||||||||||||  | || |||| ||||||| |||| |||| ||||||||||||||||||  |||    
T  5224986 gagggacgaaattaaaaacacctaataacaaaatttgaaatttaggtaacttttcagatgatccctaactatattatagggaccaaaaccaaaaataaaa 5225085  T
Q  353 agtta 357  Q
    |||||    
T  5225086 agtta 5225090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 33 - 287
Target Start/End: Complemental strand, 11772727 - 11772473
Alignment:
Q  33 gcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaaactctgttg 132  Q
    |||||||||||||||||||||| |||||       ||||||||||||||| |||||||||||||| ||||| ||||||||||||| |||||  || |||     
T  11772727 gcgtgtttttggttttcgtccccgtatctttttttgttctaaaacaacccttgtaagttaataactttttgattttcgtccctcctgtcaacttccgtta 11772628  T
Q  133 caaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgactatattacagg 232  Q
    |||||   |||   || | |||   |  |||||||||| | | |||  |||| ||| |||||||||||   |||||||||||||||||||||||||||||    
T  11772627 caaaagcacctcattgtctaacgacggctgacgtggcaaaggatgatgtggcaaaaaacgcttatgtgtcgtgacagatgatccctgactatattacagg 11772528  T
Q  233 gaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaata 287  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  11772527 gaccaaaaccaaaaacgaaaaggtacataggcacgaaattaaaaacacctaaata 11772473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 79 - 330
Target Start/End: Complemental strand, 5225589 - 5225330
Alignment:
Q  79 acccctgtaagttaataaccttttgcttttcgtccctcccgtcaaactctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctga 178  Q
    |||| |||||||||||||   ||||||||||| |||||  ||||||||||||| |||||| | |||| |  | |||  || ||||| |||| | ||||||    
T  5225589 acccatgtaagttaataagtctttgcttttcgcccctcttgtcaaactctgttacaaaaacgtcttgatatctaacgatgtgtgacatggcgggtgctga 5225490  T
Q  179 cttggccaaacacgcttatgtggactgacagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaac 278  Q
    |||||| ||||||| |||||||||||||||||||||||||||||| |||||| ||||||||| ||||||| |||||||||| ||||| ||||||||||||    
T  5225489 cttggctaaacacgtttatgtggactgacagatgatccctgactaaattacaaggaccaaaatcaaaaacaaaaaggtacatagggatgaaattaaaaac 5225390  T
Q  279 accta--------aatatgaaatttaggtggccttccagaagatccctgactacattaca 330  Q
    |||||        ||| | |||||||||||| |||||||| ||||| |||||| ||||||    
T  5225389 acctaagtaacacaatttaaaatttaggtggtcttccagatgatccttgactatattaca 5225330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 30334041 - 30333944
Alignment:
Q  26 taatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||||||||||||||||| |||||||||||       |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  30334041 taatttggcgtgtttttggtttttgtccctgtatctttttttgttctaaaacaacccctgtaagttaataactttttgattttcgtccctcccgtcaa 30333944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 1418972 - 1418873
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||| ||||||||| |||||||||||||||||       ||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  1418972 tgtaatttgacgtgttttttgttttcgtccctgtatctttttttgttctaaaacaacccctataagttaataactttttgattttcgtccctcccgtcaa 1418873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 25916314 - 25916215
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||||||||||||||||||| |||||||||||       ||||||||||||||||| |||||||||||| ||||  |||||||||||||||||||    
T  25916314 tgtaatttggcgtgtttttggtttttgtccctgtatctttttttgttctaaaacaacccctataagttaataactttttaattttcgtccctcccgtcaa 25916215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 36620983 - 36620913
Alignment:
Q  207 cagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  36620983 cagaagatccctgactatattacagggaccaaaaccaaaaacgaaaagttacagaaggacgaaattaaaaa 36620913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 39102021 - 39102091
Alignment:
Q  207 cagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  39102021 cagaagatccctgactatattacagggaccaaaaccaaaaacgaaaagttacagaaggacgaaattaaaaa 39102091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 193 - 347
Target Start/End: Original strand, 12251130 - 12251292
Alignment:
Q  193 cttatgtggactgacagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaata----- 287  Q
    |||||||||| ||||||||| |||||||||| | |||| |||||||||| |||||| ||||| ||||| |||| |||||||||||||| ||||||         
T  12251130 cttatgtggattgacagatgttccctgactagagtacatggaccaaaacaaaaaacaaaaagttacagtgggatgaaattaaaaacacataaataacaaa 12251229  T
Q  288 ---tgaaatttaggtggccttccagaagatccctgactacattacagggaccaaaaccaaaaa 347  Q
       |||||||||||  |||||| ||| ||||||||||||  |||  |||||||||||||||||    
T  12251230 atttgaaatttaggcagccttctagatgatccctgactatgttatggggaccaaaaccaaaaa 12251292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 30332306 - 30332405
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||||||| ||||| |||||||||||||||||       ||||||||||||||||| |||||||||||| ||||| ||||||||||||| |||||    
T  30332306 tgtaatttggcgtattttttgttttcgtccctgtatctttttttgttctaaaacaacccctataagttaataactttttgattttcgtccctcctgtcaa 30332405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 36619851 - 36619912
Alignment:
Q  216 cctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  36619851 cctgactatattacagggaccaaaaccaaaaacgaaaagttacagaaggacgaaattaaaaa 36619912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 8872825 - 8872895
Alignment:
Q  207 cagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||| |||||| ||| |||||||||||    
T  8872825 cagaagatccctgactatattacagggaccaaaatcaaaaacgaaaagttacagaaggatgaaattaaaaa 8872895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 8874029 - 8873959
Alignment:
Q  207 cagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||| |||||||||||||||||||||||||||||||| |||| ||||| |||||| |||||||||||||||    
T  8874029 cagaagatccctgactatattacagggaccaaaaccagaaacaaaaagttacagaaggacgaaattaaaaa 8873959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 17555040 - 17554921
Alignment:
Q  24 tgtaatttggcgtgtttttggtttt-cgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtca 122  Q
    ||||| || |||||||||||||||| |||||||||||        |||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||    
T  17555040 tgtaagttcgcgtgtttttggtttttcgtccctgtattattttttgttctaaaacaacccctgcaagttaataactttttgattttcgtccctcccgtca 17554941  T
Q  123 aactctgttgcaaaaatgcc 142  Q
    |  || ||| ||||||||||    
T  17554940 acttccgttacaaaaatgcc 17554921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 277
Target Start/End: Complemental strand, 39103177 - 39103094
Alignment:
Q  194 ttatgtggactgacagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||||||| ||  |||| ||| |||||||||||||||||||||||||||||||| |||||| ||| || |||||||||||||||    
T  39103177 ttatgtggccttccagaagattcctgactatattacagggaccaaaaccaaaaatgaaaagttacggaaggacgaaattaaaaa 39103094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 207 - 276
Target Start/End: Original strand, 5225040 - 5225109
Alignment:
Q  207 cagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaa 276  Q
    |||||||||||| ||||||||| ||||||||||||||||||  ||||| || ||||||||||||||||||    
T  5225040 cagatgatccctaactatattatagggaccaaaaccaaaaataaaaagttatagagggacgaaattaaaa 5225109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 11772553 - 11772501
Alignment:
Q  307 cagaagatccctgactacattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| ||||    
T  11772553 cagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtaca 11772501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 39103264 - 39103212
Alignment:
Q  307 cagaagatccctgactacattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| ||||    
T  39103264 cagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtaca 39103212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 140
Target Start/End: Complemental strand, 38626194 - 38626090
Alignment:
Q  36 tgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaaactctgttgcaa 135  Q
    |||||||||||||||||| ||||||       |||||||||||| ||||||||||| ||||| |||||  |||||||||| |||||||  ||||||  ||    
T  38626194 tgtttttggttttcgtccatgtatctttttttgttctaaaacaaaccctgtaagttgataactttttgaatttcgtccctaccgtcaacttctgttaaaa 38626095  T
Q  136 aaatg 140  Q
    |||||    
T  38626094 aaatg 38626090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 200
Target Start/End: Original strand, 12250437 - 12250567
Alignment:
Q  69 ttctaaaacaacccct-gtaagttaataaccttttgcttttcgtccctcccgtcaaactctgttgcaaaaatgccttgctggcaaacagtgagtgacgtg 167  Q
    |||||||||||||||  || ||||||| || || ||||||| ||||||||| |||||||||  | ||||||   |||| |||| ||| | | ||||||||    
T  12250437 ttctaaaacaaccccccgtgagttaatgactttctgctttttgtccctcccatcaaactct--tacaaaaacatcttgatggctaacggcgtgtgacgtg 12250534  T
Q  168 gcagatgctgacttggccaaacacgcttatgtg 200  Q
    || | |||||||||| |||||||||||||||||    
T  12250535 gcgggtgctgacttgcccaaacacgcttatgtg 12250567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 25914514 - 25914612
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||||||||||||| |||| ||||  ||||||       ||| ||||||||||||||| |||||||||| ||||  |||||||||||||||||||    
T  25914514 tgtaatttggcgtgttttttgtttccgtctttgtatctttttt-gttttaaaacaacccctgttagttaataacttttttattttcgtccctcccgtcaa 25914612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 1417477 - 1417533
Alignment:
Q  68 gttctaaaacaacccc-tgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||| |||||||||||||| ||||  |||||||||||||||||||    
T  1417477 gttctaaaacaaccccctgtaagttaataacttttttattttcgtccctcccgtcaa 1417533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 27756812 - 27756723
Alignment:
Q  33 gcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtca 122  Q
    |||||||||| |||||||||||||||||       |||||||||||| |||||||| |||  ||| |||||||||| |||||| ||||||    
T  27756812 gcgtgttttttgttttcgtccctgtatctttttttgttctaaaacaaaccctgtaaattataaacattttgcttttggtccctgccgtca 27756723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 38624922 - 38624974
Alignment:
Q  307 cagaagatccctgactacattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
    |||| |||| ||||||| |||||||||||||||||||||||||||||| ||||    
T  38624922 cagatgatctctgactatattacagggaccaaaaccaaaaacgaaaaggtaca 38624974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 250 - 287
Target Start/End: Complemental strand, 17553321 - 17553284
Alignment:
Q  250 aaaaggtacagagggacgaaattaaaaacacctaaata 287  Q
    |||||||||||| |||||||||||||||||||||||||    
T  17553321 aaaaggtacagatggacgaaattaaaaacacctaaata 17553284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 5224933 - 5224985
Alignment:
Q  307 cagaagatccctgactacattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
    |||| ||||| |||||| |||||||||||||||||||||||| ||||| ||||    
T  5224933 cagatgatccatgactatattacagggaccaaaaccaaaaactaaaaggtaca 5224985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 28592239 - 28592290
Alignment:
Q  163 acgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgat 214  Q
    ||||||||  ||||||| |||| |||||||||||||||| ||||||||||||    
T  28592239 acgtggcaattgctgacatggcaaaacacgcttatgtggcctgacagatgat 28592290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 16308588 - 16308687
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatc-nnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtca 122  Q
    ||||| || ||||||||||||||||||||||||||||        |||||||||||  ||||||||||||  | |||| ||||||| |||||| ||||||    
T  16308588 tgtaagttcgcgtgtttttggttttcgtccctgtatcttttttttgttctaaaacagaccctgtaagttataagccttgtgcttttggtccctaccgtca 16308687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 5225461 - 5225409
Alignment:
Q  307 cagaagatccctgactacattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
    |||| |||||||||||| |||||| ||||||||| ||||||| ||||| ||||    
T  5225461 cagatgatccctgactaaattacaaggaccaaaatcaaaaacaaaaaggtaca 5225409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 12251375 - 12251299
Alignment:
Q  69 ttctaaaacaacccctgtaagttaa-taaccttttgcttttcgtccctcccgtcaaactctgttgcaaaaatgcctt 144  Q
    |||||||||| |||||||||||||| ||   |||||||||| |||||||| | ||||||  ||| ||||||||||||    
T  12251375 ttctaaaacagcccctgtaagttaaatatttttttgcttttggtccctcctgccaaacttcgttacaaaaatgcctt 12251299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 194; Significance: 1e-105; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 24 - 311
Target Start/End: Original strand, 28563399 - 28563694
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||||||||||||||| ||||||        |||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  28563399 tgtaatttggcgtgtttttggttttcgtccttgtatctttttttcttctaaaacaacccctataagttaataactttttgcttttcgtccctcccgtcaa 28563498  T
Q  124 actctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgacta 223  Q
    |||||||| |||||||||||||| ||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28563499 actctgttacaaaaatgccttgcaggctaacagtgagtgacgtggcaggggctgacttggccaaacacgcttatgtggactgacagatgatccttgacta 28563598  T
Q  224 tattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacct--------aaatatgaaatttaggtggccttccagaa 311  Q
    |||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||        |||||||||||||||||||||||||||||    
T  28563599 tattacagggaccaaaaccaaaaacgaaaaggtacaaagggataaaattaaaaacacctaaataacaaaatatgaaatttaggtggccttccagaa 28563694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 24 - 287
Target Start/End: Original strand, 45499328 - 45499591
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||| || |||||||||||||||||||||| |||||       |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  45499328 tgtaagttcgcgtgtttttggttttcgtccccgtatctttttttgttctaaaacaacccctgtaagttaataactttttgattttcgtccctcccgtcaa 45499427  T
Q  124 actctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgacta 223  Q
      || ||| |||||| ||||  ||| | ||| | || |||| ||||| | | |||  |||| ||| |||||||||||   ||||||||||||||||||||    
T  45499428 cttccgttacaaaaacgcctcactgtctaacggcgactgacatggcaaaggatgatgtggcaaaaaacgcttatgtgtcgtgacagatgatccctgacta 45499527  T
Q  224 tattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaata 287  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  45499528 tattacagggaccaaaaccaaaaaggaaaaggtacatagggacgaaattaaaaacacctaaata 45499591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 24 - 287
Target Start/End: Original strand, 40303316 - 40303579
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||| || |||||||||||||||||||||| |||||       ||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  40303316 tgtaagttcgcgtgtttttggttttcgtccccgtatctttttttgttctaaaacaacccctataagttaataactttttgattttcgtccctcccgtcaa 40303415  T
Q  124 actctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgacta 223  Q
      || ||| |||||| ||||  ||| | ||| | || |||| ||||| | | |||  |||| ||| |||||||||||   ||||||||||||||||||||    
T  40303416 cttccgttacaaaaacgcctcactgtctaacggcgactgacatggcaaaggatgatgtggcaaaaaacgcttatgtgtcgtgacagatgatccctgacta 40303515  T
Q  224 tattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaata 287  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  40303516 tattacagggaccaaaaccaaaaaggaaaaggtacatagggacgaaattaaaaacacctaaata 40303579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 1841788 - 1841692
Alignment:
Q  27 aatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||||||| |||||||||||       |||||||||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  1841788 aatttggcgtgtttttggtttttgtccctgtatctttttttgttctaaaacaacccctgtaagttaataacttttttattttcgtccctcccgtcaa 1841692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 13947771 - 13947869
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||||||||||||||| ||||||       ||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  13947771 tgtaatttggcgtgtttttggttttcgtcc-tgtatctttttttgttctaaaacaacccctataagttaataactttttgattttcgtccctcccgtcaa 13947869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 14088960 - 14089058
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||||||||||||||| ||||||       ||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  14088960 tgtaatttggcgtgtttttggttttcgtcc-tgtatctttttttgttctaaaacaacccctataagttaataactttttgattttcgtccctcccgtcaa 14089058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 1840180 - 1840279
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||||||||||||||||||| || | ||||||       ||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  1840180 tgtaatttggcgtgtttttggtttttgttcttgtatctttttttgttctaaaacaacccctataagttaataactttttgattttcgtccctcccgtcaa 1840279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 40304798 - 40304682
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||| || ||||||||||||||||||||||||||||       |||||||||||| ||||||||||| ||||| |||||  |||||||||| |||||||    
T  40304798 tgtaagttcgcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaaaccctgtaagttgataactttttgaatttcgtccctaccgtcaa 40304699  T
Q  124 actctgttgcaaaaatg 140  Q
      ||||||  |||||||    
T  40304698 cttctgttaaaaaaatg 40304682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 45493068 - 45492952
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||| || ||||||||||||||||||||||||||||       |||||||||||| ||||||||||| ||||| |||||  |||||||||| |||||||    
T  45493068 tgtaaattcgcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaaaccctgtaagttgataactttttgaatttcgtccctaccgtcaa 45492969  T
Q  124 actctgttgcaaaaatg 140  Q
      ||||||  |||||||    
T  45492968 cttctgttaaaaaaatg 45492952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 45500810 - 45500694
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||| || ||||||||||||||||||||||||||||       |||||||||||| ||||||||||| ||||| |||||  |||||||||| |||||||    
T  45500810 tgtaaattcgcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaaaccctgtaagttgataactttttgaatttcgtccctaccgtcaa 45500711  T
Q  124 actctgttgcaaaaatg 140  Q
      ||||||  |||||||    
T  45500710 cttctgttaaaaaaatg 45500694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 38730107 - 38729984
Alignment:
Q  16 atcatcattgtaatttggcgtgtttttggtttt-cgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccc 114  Q
    |||||| |||||| || |||||||||||||||| ||||||||||||       |||||||||||| ||||||||||||  ||||||||| ||||||||||    
T  38730107 atcatccttgtaagttcgcgtgtttttggtttttcgtccctgtatctttttttgttctaaaacaaaccctgtaagttacaaaccttttgattttcgtccc 38730008  T
Q  115 tcccgtcaaactctgttgcaaaaa 138  Q
    | |||| |  ||||||| ||||||    
T  38730007 tgccgttagcctctgttacaaaaa 38729984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 69 - 270
Target Start/End: Complemental strand, 44097342 - 44097141
Alignment:
Q  69 ttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaaactctgttgcaaaaatgccttgctggcaaacagtgagtgacgtgg 168  Q
    ||||||||||| |||||||||||  |||||||||| |||| ||||||  ||| ||  |||||| |||||| || ||| |||||||| |      ||||||    
T  44097342 ttctaaaacaaaccctgtaagttgttaaccttttggttttagtccctaacgttaacttctgttacaaaaacgcgttgttggcaaacggaattacacgtgg 44097243  T
Q  169 cagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacga 268  Q
    ||   |||||| |||| ||||||||||||||| |||||||||||||   |||||| |||  | |||||||||||||||||| |||  |||| ||||| ||    
T  44097242 caatcgctgacatggcaaaacacgcttatgtgtactgacagatgataagtgactagatttgaaggaccaaaaccaaaaacgcaaaattacatagggatga 44097143  T
Q  269 aa 270  Q
    ||    
T  44097142 aa 44097141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 16142440 - 16142492
Alignment:
Q  225 attacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||||||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  16142440 attacagggaccaaaatcaaaaacgaaaaattacagagggacgaaattaaaaa 16142492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 16142248 - 16142347
Alignment:
Q  23 ttgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtca 122  Q
    |||||| || |||||||||||||||||||| ||||||        |||||||||||| ||||||||||||  ||| ||||| |||||| |||||||||||    
T  16142248 ttgtaagttcgcgtgtttttggttttcgtctctgtatttttttctgttctaaaacaaaccctgtaagttacaaacgttttgattttcggccctcccgtca 16142347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 360
Target Start/End: Original strand, 28563582 - 28563635
Alignment:
Q  307 cagaagatccctgactacattacagggaccaaaaccaaaaacgaaaagttacaa 360  Q
    |||| ||||| |||||| |||||||||||||||||||||||||||||| |||||    
T  28563582 cagatgatccttgactatattacagggaccaaaaccaaaaacgaaaaggtacaa 28563635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 38728220 - 38728314
Alignment:
Q  37 gtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaaactctgtt 131  Q
    ||||||||||||||||| ||||||       |||||||||||| ||||| ||||||  ||| ||||| |||||||||||||||||| | ||||||    
T  38728220 gtttttggttttcgtccatgtatctttttttgttctaaaacaaaccctgcaagttacaaacgttttgattttcgtccctcccgtcataatctgtt 38728314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 40303499 - 40303551
Alignment:
Q  307 cagaagatccctgactacattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
    |||| |||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  40303499 cagatgatccctgactatattacagggaccaaaaccaaaaaggaaaaggtaca 40303551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 45499511 - 45499563
Alignment:
Q  307 cagaagatccctgactacattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
    |||| |||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  45499511 cagatgatccctgactatattacagggaccaaaaccaaaaaggaaaaggtaca 45499563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 270
Target Start/End: Original strand, 22053147 - 22053393
Alignment:
Q  23 ttgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtca 122  Q
    |||||| || |||||||||| |||||||||||||||||       |||||||||||||||| ||||||||  ||| ||||| |||| ||||||  ||| |    
T  22053147 ttgtaagttcgcgtgttttttgttttcgtccctgtatctttttttgttctaaaacaacccc-gtaagttataaacgttttggttttagtccctaacgtta 22053245  T
Q  123 aactctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgact 222  Q
    |  |||||| |||||| ||   |||||||||| | |    || |||||   |||||| |||  |||||||||||||||| |||||| |||||   ||| |    
T  22053246 acttctgttacaaaaacgctgagctggcaaacggagtcacacatggcaatcgctgacatggaaaaacacgcttatgtggcctgacaaatgataagtga-t 22053344  T
Q  223 at-attacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaa 270  Q
    || |||  |||||||||||||||||||| |||| | || ||||||||||    
T  22053345 atgatttgagggaccaaaaccaaaaacgcaaagttgcatagggacgaaa 22053393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 115
Target Start/End: Complemental strand, 16143623 - 16143541
Alignment:
Q  33 gcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccct 115  Q
    ||||||||||| ||||||||||||||||       |||||||||||| |||||||||||  |||| ||||| |||| ||||||    
T  16143623 gcgtgtttttgattttcgtccctgtatctttttttgttctaaaacaaaccctgtaagttgttaactttttggttttagtccct 16143541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 277
Target Start/End: Original strand, 38728402 - 38728450
Alignment:
Q  229 cagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||||||||||| ||||||||||||  |||||| |||||||||||||||    
T  38728402 cagggaccaaaatcaaaaacgaaaaattacagaaggacgaaattaaaaa 38728450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 7317413 - 7317504
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccct 115  Q
    ||||| || ||||||||||||||||||||| ||||||       |||||||||||| |||| ||||||  |||| ||||| |||| ||||||    
T  7317413 tgtaagttcgcgtgtttttggttttcgtccttgtatctttttttgttctaaaacaaaccctataagttgttaactttttggttttggtccct 7317504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 138
Target Start/End: Original strand, 15346896 - 15347001
Alignment:
Q  33 gcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaaactctgttg 132  Q
    ||||||||||||||||| ||| | ||||       ||||||||||||||| ||||| |||  ||| |||||||||| |||| | |||||| | ||||||     
T  15346896 gcgtgtttttggttttcatccatatatctttttttgttctaaaacaacccttgtaaattataaacgttttgcttttggtccttgccgtcataatctgtta 15346995  T
Q  133 caaaaa 138  Q
    ||||||    
T  15346996 caaaaa 15347001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 131; Significance: 7e-68; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 24 - 287
Target Start/End: Original strand, 46245145 - 46245408
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||| || |||||||||||||||||||||| |||||       |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  46245145 tgtaagttcgcgtgtttttggttttcgtccccgtatctttttttgttctaaaacaacccctgtaagttaataactttttgattttcgtccctcccgtcaa 46245244  T
Q  124 actctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgacta 223  Q
      || ||| |||||| |||| |||| | ||| | |  |||||||||| | | |||  |||| ||| |||||||||||   ||||||||||||||||||||    
T  46245245 cttccgttacaaaaacgcctcgctgtctaacggcggctgacgtggcaaaggatgatgtggcaaaaaacgcttatgtgtcgtgacagatgatccctgacta 46245344  T
Q  224 tattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaata 287  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  46245345 tattacagggaccaaaaccaaaaacgaaaaggtacatagggacgaaattaaaaacacctaaata 46245408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 69 - 278
Target Start/End: Complemental strand, 30792821 - 30792607
Alignment:
Q  69 ttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaaactctgttgcaaaaatgccttgctggcaaacagtgagtgacgtgg 168  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||| |||||||| || |||   | ||||||||     
T  30792821 ttctaaaacaacccctgtaagttaataactttttgcttttcgtccctcccgtcaaactttgttacaaaaacgccttgctagctaacgacgtgtgacgtga 30792722  T
Q  169 cagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgac-----tatattacagggaccaaaaccaaaaacgaaaaggtacagagg 263  Q
    ||| |||||||||||| ||||||| ||||||||||||| ||||||||| ||||     ||||||||| |||| |||| ||||||| ||||| |||| |||    
T  30792721 caggtgctgacttggctaaacacgtttatgtggactgagagatgatccatgactatattatattacatggacaaaaaacaaaaacaaaaagttacaaagg 30792622  T
Q  264 gacgaaattaaaaac 278  Q
    |||  ||||||||||    
T  30792621 gacataattaaaaac 30792607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 71 - 218
Target Start/End: Complemental strand, 9532603 - 9532456
Alignment:
Q  71 ctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaaactctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggca 170  Q
    ||||||||||||| |||| |||||||| |||||||||||||||||||| |||||||||||| |||||| | ||||||||| ||| ||| |||| | ||      
T  9532603 ctaaaacaaccccagtaaattaataactttttgcttttcgtccctcccatcaaactctgttacaaaaacgtcttgctggctaacggtgtgtgatgcggtg 9532504  T
Q  171 gatgctgacttggccaaacacgcttatgtggactgacagatgatccct 218  Q
    |||||||||||||  ||||||| ||||||||| |||||||||||||||    
T  9532503 gatgctgacttggataaacacgtttatgtggattgacagatgatccct 9532456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 89 - 359
Target Start/End: Original strand, 30791335 - 30791614
Alignment:
Q  89 gttaataacctt-ttgcttttcgtccctcccgtcaaactctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaa 187  Q
    ||||||||| || ||| ||||||||| | ||||||||| | ||| ||||||  ||||| |||| | | | | ||||  |||| | |||||| ||||| ||    
T  30791335 gttaataactttattgtttttcgtcctttccgtcaaacaccgttacaaaaacaccttgttggctagcggcgtgtgatatggcgggtgctgatttggctaa 30791434  T
Q  188 acacgcttatgtggactgacagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaata 287  Q
    ||||| |||||||||||||  |||||||||| ||||||||| | ||| ||||| ||||||| |||||||| ||||| || |||||||||| |||||||||    
T  30791435 acacgtttatgtggactgattgatgatccctaactatattatatggatcaaaatcaaaaacaaaaaggtatagaggaacaaaattaaaaaaacctaaata 30791534  T
Q  288 --------tgaaatttaggtggccttccagaagatccctgactacattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
            ||||||||| ||||||||  ||| |||| ||||||| |||||||| |||||||||||||| |||||||||||    
T  30791535 acaaaatttgaaatttaagtggccttttagatgatcactgactatattacaggcaccaaaaccaaaaatgaaaagttaca 30791614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 69 - 287
Target Start/End: Original strand, 15135446 - 15135664
Alignment:
Q  69 ttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaaactctgttgcaaaaatgccttgctggcaaacagtgagtgacgtgg 168  Q
    ||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||  | |||| |||||| |||    || | ||| | |  ||||||||    
T  15135446 ttctaaaacaacccctgcaagttaataactttttgattttcgtccctcccgtcaacttttgttacaaaaacgccaaagtgtctaacggcggctgacgtgg 15135545  T
Q  169 cagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacga 268  Q
    |  | | |||  |||| ||| |  ||||||||   ||||| ||||||| | ||||||||||| |||||||||||||||||||||||||||| || |||||    
T  15135546 cgaaggatgatgtggcaaaaaagtcttatgtgtcgtgacaaatgatccttaactatattacaaggaccaaaaccaaaaacgaaaaggtacaaagtgacga 15135645  T
Q  269 aattaaaaacacctaaata 287  Q
    |||||||||||| ||||||    
T  15135646 aattaaaaacacataaata 15135664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 185 - 287
Target Start/End: Original strand, 37132019 - 37132121
Alignment:
Q  185 caaacacgcttatgtggactgacagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaa 284  Q
    |||| |||||||||||   ||||||||||||||| |||||||||||||||||||||| ||||||||||   |||||||||||||||||||||||||||||    
T  37132019 caaaaacgcttatgtgtcgtgacagatgatccctaactatattacagggaccaaaactaaaaacgaaatattacagagggacgaaattaaaaacacctaa 37132118  T
Q  285 ata 287  Q
    |||    
T  37132119 ata 37132121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 21716655 - 21716556
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||||||||||||||||||||||       ||| |||||||| ||||||||||||||||| ||||| |||||||||||||||||||    
T  21716655 tgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttttaaaacaatccctgtaagttaataactttttgattttcgtccctcccgtcaa 21716556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 40028480 - 40028579
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||| |||||||||||| ||||  |||||||||||||||||||    
T  40028480 tgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaacccctataagttaataacttttttattttcgtccctcccgtcaa 40028579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 45276432 - 45276531
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||| |||||||||||| |||||||||||       |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  45276432 tgtaatttggcgagtttttggtttttgtccctgtatctttttttgttctaaaacaacccctgtaagttaataactttttgattttcgtccctcccgtcaa 45276531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 45278003 - 45277904
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||||||||||||||||||||||       ||| ||||||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  45278003 tgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttttaaaacaacccctataagttaataactttttgattttcgtccctcccgtcaa 45277904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 212 - 287
Target Start/End: Complemental strand, 31734603 - 31734528
Alignment:
Q  212 gatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaata 287  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||| | ||||||||||||||||||||||    
T  31734603 gatccctgactatattacagagaccaaaaccaaaaatgaaaaggtacagagaggcgaaattaaaaacacctaaata 31734528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 8231670 - 8231571
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||||| ||||||||||||| |||||||||||       |||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  8231670 tgtaatttggcttgtttttggtttttgtccctgtatctttttttgttctaaaacaacccctgtaagttaataactttttgattttcgtcactcccgtcaa 8231571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 24 - 119
Target Start/End: Original strand, 31392081 - 31392176
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccg 119  Q
    ||||||||| |||||||||||||||||||||||||||       ||||||||||||||||| |||||||||||| ||||| |||||||||||||||    
T  31392081 tgtaatttgacgtgtttttggttttcgtccctgtatctttttttgttctaaaacaacccctataagttaataactttttgattttcgtccctcccg 31392176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 31393695 - 31393596
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||||||||||||||| ||||||       ||| |||||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  31393695 tgtaatttggcgtgtttttggttttcgtccttgtatctttttttgttataaaacaacccctgtaagttaataactttttaattttcgtccctcccgtcaa 31393596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 8230093 - 8230192
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||| ||||||||||||||||||||||||||       ||||||||||||||||| |||||||||||| ||||  |||||||||||| ||||||    
T  8230093 tgtaatttggtgtgtttttggttttcgtccctgtatctttttttgttctaaaacaacccctataagttaataacttttttattttcgtccctctcgtcaa 8230192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 21715095 - 21715194
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||||| ||||||||||||||||       ||| |||||||| |||| |||||||||||| ||||| |||||||||||||||||||    
T  21715095 tgtaatttggcgtgtttttgattttcgtccctgtatctttttttgttttaaaacaatccctataagttaataactttttgattttcgtccctcccgtcaa 21715194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 4675832 - 4675734
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||||| ||||||||| ||||||       |||||||||||||| || |||||||||||| ||||| |||||||||||||||||||    
T  4675832 tgtaatttggcgtgtttttgattttcgtccatgtatctttttt-gttctaaaacaaccactataagttaataactttttgattttcgtccctcccgtcaa 4675734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 12180675 - 12180577
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtca 122  Q
    ||||| || ||||||||||||||||||||||||||||       |||||||||||| ||||||||||||  ||| ||||| ||||||||||||||||||    
T  12180675 tgtaagttcgcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaaaccctgtaagttacaaacgttttgattttcgtccctcccgtca 12180577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 14780601 - 14780705
Alignment:
Q  181 tggccaaacacgcttatgtggactgacagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacac 280  Q
    |||| ||| |||||||||||   | ||||||||||| ||||| |||||| | ||||||||| || ||  |||||||||||||||||||||||||||||||    
T  14780601 tggcaaaaaacgcttatgtgtcgtaacagatgatccttgactgtattactgagaccaaaacaaacaa--aaaaggtacagagggacgaaattaaaaacac 14780698  T
Q  281 ctaaata 287  Q
    |||||||    
T  14780699 ctaaata 14780705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 15230620 - 15230724
Alignment:
Q  181 tggccaaacacgcttatgtggactgacagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacac 280  Q
    |||| ||| |||||||||||   | ||||||||||| ||||| |||||| | ||||||||| || ||  |||||||||||||||||||||||||||||||    
T  15230620 tggcaaaaaacgcttatgtgtcgtaacagatgatccttgactgtattactgagaccaaaacaaacaa--aaaaggtacagagggacgaaattaaaaacac 15230717  T
Q  281 ctaaata 287  Q
    |||||||    
T  15230718 ctaaata 15230724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 46246611 - 46246495
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||| || ||||||||||||||||||||||||||||       |||||||||||| ||||||||||| ||||| |||||  |||||||||| |||||||    
T  46246611 tgtaagttcgcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaaaccctgtaagttgataactttttgaatttcgtccctaccgtcaa 46246512  T
Q  124 actctgttgcaaaaatg 140  Q
      ||||||  |||||||    
T  46246511 cttctgttaaaaaaatg 46246495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 40030065 - 40029966
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||||||||||||| |||||| |||||||||        |||||||||||||| || ||||||| |||| ||||| |||||||||||||||||||    
T  40030065 tgtaatttggcgtgttttttgttttcatccctgtatatttttttgttctaaaacaacctctataagttagtaactttttgattttcgtccctcccgtcaa 40029966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 191 - 287
Target Start/End: Original strand, 11747582 - 11747672
Alignment:
Q  191 cgcttatgtggactgacagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaata 287  Q
    ||||||||||   ||||||||||||||| ||||||||||||||||||      ||||||||||| ||||||||||| ||||||||||||| ||||||    
T  11747582 cgcttatgtgtcgtgacagatgatccctaactatattacagggacca------aaaacgaaaagatacagagggacaaaattaaaaacacataaata 11747672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 208 - 273
Target Start/End: Original strand, 30791563 - 30791628
Alignment:
Q  208 agatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaatta 273  Q
    |||||||| |||||||||||||||| |||||||||||||| |||||| |||||||| |||||||||    
T  30791563 agatgatcactgactatattacaggcaccaaaaccaaaaatgaaaagttacagaggaacgaaatta 30791628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 14774579 - 14774634
Alignment:
Q  68 gttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||    
T  14774579 gttctaaaacaacccctgcaagttaataactttttgattttcgtccctcccgtcaa 14774634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 15225032 - 15225087
Alignment:
Q  68 gttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||    
T  15225032 gttctaaaacaacccctgcaagttaataactttttgattttcgtccctcccgtcaa 15225087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 24 - 194
Target Start/End: Complemental strand, 21914674 - 21914510
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||| ||||||||||||||||||||| ||||        || ||||||||| ||| |||||||||||| |||  ||||| |||||||  |||||    
T  21914674 tgtaatttggtgtgtttttggttttcgtccctatatctttt----ttataaaacaacacctataagttaataactttt--ctttttgtccctcatgtcaa 21914581  T
Q  124 actctgttgcaaaaatgccttgctggcaaacagtga-gtgacgtggcagatgctgacttggccaaacacgct 194  Q
    |||||||| |||||| ||||||| ||| ||| | || |||||||||| | |||||||||| | |||||||||    
T  21914580 actctgttacaaaaacgccttgcaggctaac-gagatgtgacgtggcgggtgctgacttgactaaacacgct 21914510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 232 - 359
Target Start/End: Original strand, 9531770 - 9531906
Alignment:
Q  232 ggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaa---acacctaaata-------tgaaatttaggtggccttccagaagatccctgac 321  Q
    ||||||||||||||||| |||||||||| | ||||||||||||||   | | |||||||       ||||||||||||| ||||||||| | ||||||||    
T  9531770 ggaccaaaaccaaaaac-aaaaggtacaaatggacgaaattaaaataaaaaactaaataacaaagttgaaatttaggtgaccttccagatggtccctgac 9531868  T
Q  322 tacattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
    || ||||| ||||| ||||| |||||| ||||||||||    
T  9531869 tatattactgggacaaaaactaaaaactaaaagttaca 9531906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 46245328 - 46245380
Alignment:
Q  307 cagaagatccctgactacattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| ||||    
T  46245328 cagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtaca 46245380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 32881183 - 32881238
Alignment:
Q  68 gttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||||||||||| |||||||||||| ||||| |||||||||||||| ||||    
T  32881183 gttctaaaacaacccctataagttaataactttttgattttcgtccctcccatcaa 32881238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 9531854 - 9531924
Alignment:
Q  207 cagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||||| |||||||||||||||| ||||| ||||| |||||| ||||| |||||||  |||||||||||||    
T  9531854 cagatggtccctgactatattactgggacaaaaactaaaaactaaaagttacagagaaacgaaattaaaaa 9531924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 11670016 - 11670117
Alignment:
Q  176 tgacttggccaaacacgcttatgtggactgacagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaa 275  Q
    |||| |||| ||||||||||||||| |||||||||||||   |||||| |||  |||||||||||||||||| | |||  | |||||||| |||||| ||    
T  11670016 tgacatggcaaaacacgcttatgtgtactgacagatgataagtgactagatttgagggaccaaaaccaaaaatgcaaaattgcagagggatgaaattgaa 11670115  T
Q  276 aa 277  Q
    ||    
T  11670116 aa 11670117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 13420322 - 13420224
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtca 122  Q
    ||||| || |||||||||||||||| |||||||||||       |||||||||||||||||||||||||  | | ||||| |||| |||||| ||||||    
T  13420322 tgtaagtttgcgtgtttttggttttagtccctgtatctttttttgttctaaaacaacccctgtaagttataagcattttggttttagtccctgccgtca 13420224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 33 - 141
Target Start/End: Complemental strand, 11671313 - 11671205
Alignment:
Q  33 gcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaaactctgttg 132  Q
    |||||||||| |||||||||| ||||||       |||||||||||| ||||||||||||  ||  ||||| |||||||||||| |||||   ||||||     
T  11671313 gcgtgttttttgttttcgtccatgtatctatttttgttctaaaacaaaccctgtaagttacaaatgttttgattttcgtccctctcgtcagcatctgtta 11671214  T
Q  133 caaaaatgc 141  Q
    |||||||||    
T  11671213 caaaaatgc 11671205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 21914398 - 21914457
Alignment:
Q  70 tctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaaactctg 129  Q
    |||||||||||  | ||||||||||||| ||||| ||||||| |||||||||||||||||    
T  21914398 tctaaaacaacttcggtaagttaataactttttgtttttcgttcctcccgtcaaactctg 21914457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 277
Target Start/End: Complemental strand, 11748813 - 11748732
Alignment:
Q  195 tatgtggactgacagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    ||||||| || |||| |||||||| ||||||||| |||||||||| |||||| |||||| | ||| ||||| |||||||||||    
T  11748813 tatgtggccttacaggtgatccct-actatattatagggaccaaatccaaaatcgaaaaagaacatagggatgaaattaaaaa 11748732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 248
Target Start/End: Complemental strand, 37133676 - 37133461
Alignment:
Q  33 gcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaaactctgttg 132  Q
    |||||||||||||||||||| |||||||       |||||||||||||||| | ||||||  ||| ||||| ||||||| |||||| ||||  || |||     
T  37133676 gcgtgtttttggttttcgtcactgtatctttttttgttctaaaacaacccccggaagttataaacgttttggttttcgttcctcccttcaatttccgtta 37133577  T
Q  133 caaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgactatattacagg 232  Q
    ||||||  |||   || | ||| ||   |||||||||  | | |||| |||| ||| || ||||||||   ||||||||||  |||||||||||||  ||    
T  37133576 caaaaacacctatgtgtctaacggtcgctgacgtggcgaaggatgacatggcaaaaaacacttatgtgttgtgacagatgaagcctgactatattatggg 37133477  T
Q  233 gaccaaaaccaaaaac 248  Q
    || |||||||||||||    
T  37133476 gatcaaaaccaaaaac 37133461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 115
Target Start/End: Original strand, 12178515 - 12178597
Alignment:
Q  33 gcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccct 115  Q
    ||||||||||||||||||||||||||||       |||||||||||| | |||||||||  |||| ||||| |||| ||||||    
T  12178515 gcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaaactctgtaagttgttaactttttggttttagtccct 12178597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 12180484 - 12180432
Alignment:
Q  225 attacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||||||||| ||||| ||||||||||||  ||||||||||||||||| ||||    
T  12180484 attacagggatcaaaatcaaaaacgaaaaattacagagggacgaaattcaaaa 12180432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 359
Target Start/End: Complemental strand, 31734603 - 31734556
Alignment:
Q  312 gatccctgactacattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
    |||||||||||| ||||||| ||||||||||||||| |||||| ||||    
T  31734603 gatccctgactatattacagagaccaaaaccaaaaatgaaaaggtaca 31734556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 32882707 - 32882652
Alignment:
Q  68 gttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||||||||| | ||||||||| || ||||| ||||||||||| |||||||    
T  32882707 gttctaaaacaacccttataagttaatgactttttgattttcgtcccttccgtcaa 32882652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 15136975 - 15136877
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||| || ||||||||||| ||||||||| || |||       ||||||||||||||| || ||||||||||| ||||| ||||| |||| ||||||||    
T  15136975 tgtaaattcgcgtgtttttgattttcgtccttgaatctttttttgttctaaaacaacccttgcaagttaataactttttgattttcatccc-cccgtcaa 15136877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 37131867 - 37131957
Alignment:
Q  33 gcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||| |||||||||||| ||||||||       ||||||||| ||| | |||||||||  ||| ||||| ||||||||||| |||||||    
T  37131867 gcgtgtgtttggttttcgttcctgtatctttttttgttctaaaataactcatgtaagttataaacgttttggttttcgtcccttccgtcaa 37131957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 352
Target Start/End: Original strand, 37132041 - 37132086
Alignment:
Q  307 cagaagatccctgactacattacagggaccaaaaccaaaaacgaaa 352  Q
    |||| ||||||| |||| ||||||||||||||||| ||||||||||    
T  37132041 cagatgatccctaactatattacagggaccaaaactaaaaacgaaa 37132086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 12178697 - 12178749
Alignment:
Q  225 attacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||||||||||||||| ||||| ||||||  |||| | |||||||||||||||    
T  12178697 attacagggaccaaaatcaaaaccgaaaaattacatacggacgaaattaaaaa 12178749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 360
Target Start/End: Original strand, 15135597 - 15135637
Alignment:
Q  320 actacattacagggaccaaaaccaaaaacgaaaagttacaa 360  Q
    |||| |||||| ||||||||||||||||||||||| |||||    
T  15135597 actatattacaaggaccaaaaccaaaaacgaaaaggtacaa 15135637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 127; Significance: 2e-65; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 24 - 287
Target Start/End: Complemental strand, 40499288 - 40499025
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||| || |||||||||||||||||||||| |||||       |||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||    
T  40499288 tgtaagttcgcgtgtttttggttttcgtccccgtatctttttttgttctaaaacaaccccggtaagttaataactttttgattttcgtccctcccgtcaa 40499189  T
Q  124 actctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgacta 223  Q
      || ||| |||||| |||| |||| | ||| | |  |||||||||| | | |||  |||| ||| |||||||||||   ||||||||||||||||||||    
T  40499188 cttccgttacaaaaacgcctcgctgtctaacggcggctgacgtggcaaaggatgatgtggcaaaaaacgcttatgtgtcgtgacagatgatccctgacta 40499089  T
Q  224 tattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaata 287  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  40499088 tattacagggaccaaaaccaaaaacgaaaaggtacatagggacgaaattaaaaacacctaaata 40499025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 24 - 287
Target Start/End: Complemental strand, 31796870 - 31796607
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||| || |||||||||||||||||||||| |||||       |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  31796870 tgtaagttcgcgtgtttttggttttcgtccccgtatctttttttgttctaaaacaacccctgtaagttaataactttttgattttcgtccctcccgtcaa 31796771  T
Q  124 actctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgacta 223  Q
      || ||| |||||| ||||  ||| | ||| | || |||| ||||| | | |||  |||| ||| ||||| |||||   ||||||||||||||||||||    
T  31796770 cttccgttacaaaaacgcctcactgtctaacggcgactgacatggcaaaggatgatgtggcaaaaaacgctgatgtgtcgtgacagatgatccctgacta 31796671  T
Q  224 tattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaata 287  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  31796670 tattacagggaccaaaaccaaaaaggaaaaggtacatagggacgaaattaaaaacaactaaata 31796607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 24 - 206
Target Start/End: Original strand, 31656976 - 31657159
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnn-gttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtca 122  Q
    ||||||||||| |||||||||||||||||| |||||         |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  31656976 tgtaatttggcatgtttttggttttcgtccttgtattttttttttgttctaaaacaatccctgtaagttaataactttttgcttttcgtccctcccgtca 31657075  T
Q  123 aactctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactga 206  Q
    ||||||||| |||||| ||||||||||| ||||||||||||| |||||| ||||||||||| |||||| |||||||||||||||    
T  31657076 aactctgttacaaaaacgccttgctggctaacagtgagtgacttggcaggtgctgacttggtcaaacatgcttatgtggactga 31657159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 24 - 287
Target Start/End: Complemental strand, 48568566 - 48568303
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||| || |||||||||||||||||||||| ||||        |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  48568566 tgtaagttcgcgtgtttttggttttcgtccccgtatttttttttgttctaaaacaacccctgtaagttaataactttttgattttcgtccctcccgtcaa 48568467  T
Q  124 actctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgacta 223  Q
      || ||| |||||| ||||  ||| | |||   |  || ||||||| | | |||  |||| ||| |  ||||||||   ||||||||||||||||||||    
T  48568466 cttccgttacaaaaacgcctccctgtctaacgacggatgtcgtggcaaaggatgatgtggcaaaaaattcttatgtgtcgtgacagatgatccctgacta 48568367  T
Q  224 tattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaata 287  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  48568366 tattacagggaccaaaaccaaaaacgaaaaggtacatagggacgaaattaaaaacacctaaata 48568303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 24 - 287
Target Start/End: Complemental strand, 41083307 - 41083044
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnn-gttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtca 122  Q
    ||||| || |||||||||||||||||||||| |||||        |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  41083307 tgtaagtttgcgtgtttttggttttcgtccccgtatcttttttttgttctaaaacaacccctgtaagttaataactttttgattttcgtccctcccgtca 41083208  T
Q  123 aactctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttggccaaacacgcttatgtggactgacagatgatccctgact 222  Q
    |  || ||| |||||| ||||  ||| | | | | || |||| ||||| | | |||  |||| ||| |||||||||||   |||||||||||||||||||    
T  41083207 acttccgttacaaaaacgcctcactgtcta-cggcgactgacatggcaaaggatgatgtggcaaaaaacgcttatgtgtcgtgacagatgatccctgact 41083109  T
Q  223 atattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaata 287  Q
    |||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||    
T  41083108 atattacagggaccaaaaccaaaaagaaaaaggtacatagggacgaaattaaaaacacctaaata 41083044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 238 - 359
Target Start/End: Original strand, 31657159 - 31657288
Alignment:
Q  238 aaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaat--------atgaaatttaggtggccttccagaagatccctgactacattac 329  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||| |||||    
T  31657159 aaaccaaaaatgaaaaggtacagagggacaaaattaaaaacacctaaataacaaaatatgaaatgtaggtggccttccagaagatccctgactatattac 31657258  T
Q  330 agggaccaaaaccaaaaacgaaaagttaca 359  Q
    ||||||||||||||||||||||||||||||    
T  31657259 agggaccaaaaccaaaaacgaaaagttaca 31657288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 26 - 123
Target Start/End: Original strand, 53527995 - 53528092
Alignment:
Q  26 taatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  53527995 taatttggcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaactcctgtaagttaataactttttgattttcgtccctcccgtcaa 53528092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 207 - 276
Target Start/End: Original strand, 31657236 - 31657305
Alignment:
Q  207 cagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaa 276  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  31657236 cagaagatccctgactatattacagggaccaaaaccaaaaacgaaaagttacagaaggacgaaattaaaa 31657305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 271 - 359
Target Start/End: Complemental strand, 31658433 - 31658345
Alignment:
Q  271 ttaaaaacacctaaatatgaaatttaggtggccttccagaagatccctgactacattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
    |||||||||| ||||||| ||||||||||||||||  ||||||||| |||||| || | ||||||||||||||||||||||||||||||    
T  31658433 ttaaaaacacataaatataaaatttaggtggccttatagaagatccatgactatataatagggaccaaaaccaaaaacgaaaagttaca 31658345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 33732988 - 33733087
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||||||||||||| |||||||        ||||||||||||||||| |||||||||||| ||||| ||||||||| |||||||||    
T  33732988 tgtaatttggcgtgtttttggttttcgttcctgtatttttttttgttctaaaacaacccctataagttaataactttttgattttcgtccttcccgtcaa 33733087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 33734538 - 33734439
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||| |||||||||||||||| || ||||||||       |||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||    
T  33734538 tgtaatttagcgtgtttttggttttggttcctgtatctttttttgttctaaaacaacccctgtaagttaataactttttgattttcgtccctcccatcaa 33734439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 141
Target Start/End: Complemental strand, 53529570 - 53529453
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||||||| ||||| |||||||||||||||||       ||||||||| | ||||| |||||||||||| ||||| |||||||||||||||||||    
T  53529570 tgtaatttggcgtatttttagttttcgtccctgtatctttttttgttctaaaatagcccctataagttaataactttttgattttcgtccctcccgtcaa 53529471  T
Q  124 actctgttgcaaaaatgc 141  Q
      || ||| |||||||||    
T  53529470 cttccgttacaaaaatgc 53529453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 41081825 - 41081941
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||| || ||||||||||||||||||||||||||||       |||||||||||| ||||||||||| ||||| |||||  |||||||||| |||||||    
T  41081825 tgtaagttcgcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaaaccctgtaagttgataactttttgaatttcgtccctaccgtcaa 41081924  T
Q  124 actctgttgcaaaaatg 140  Q
      ||||||  |||||||    
T  41081925 cttctgttaaaaaaatg 41081941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 31795396 - 31795512
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||| || |||||||||||||||||| |||||||||       |||||||||||| ||||||||||| ||||| |||||  |||||||||| |||||||    
T  31795396 tgtaagttcgcgtgtttttggttttcggccctgtatctttttttgttctaaaacaaaccctgtaagttgataactttttgaatttcgtccctaccgtcaa 31795495  T
Q  124 actctgttgcaaaaatg 140  Q
      ||||||  |||||||    
T  31795496 cttctgttaaaaaaatg 31795512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 48567019 - 48567135
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||| || |||||||||||||||||||| |||||||       |||||||||||| ||||||||||| ||||| |||||  |||||||||| |||||||    
T  48567019 tgtaagtttgcgtgtttttggttttcgtcactgtatctttttttgttctaaaacaaaccctgtaagttgataactttttgaatttcgtccctaccgtcaa 48567118  T
Q  124 actctgttgcaaaaatg 140  Q
      ||||||  |||||||    
T  48567119 cttctgttaaaaaaatg 48567135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 212 - 277
Target Start/End: Complemental strand, 31658392 - 31658327
Alignment:
Q  212 gatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    ||||| ||||||||| | ||||||||||||||||||||||||| |||||| |||||||||| ||||    
T  31658392 gatccatgactatataatagggaccaaaaccaaaaacgaaaagttacagaaggacgaaattgaaaa 31658327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 40499105 - 40499053
Alignment:
Q  307 cagaagatccctgactacattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| ||||    
T  40499105 cagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtaca 40499053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 48568383 - 48568331
Alignment:
Q  307 cagaagatccctgactacattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| ||||    
T  48568383 cagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtaca 48568331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 141
Target Start/End: Original strand, 30700328 - 30700436
Alignment:
Q  33 gcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaaactctgttg 132  Q
    ||||||||||||||||||||| ||||||       |||||||||||  ||||||||||||  ||| |||||||||| |||||| ||||||   ||||||     
T  30700328 gcgtgtttttggttttcgtccttgtatctttttttgttctaaaacacaccctgtaagttataaacattttgcttttggtccctgccgtcagcatctgtta 30700427  T
Q  133 caaaaatgc 141  Q
    |||||||||    
T  30700428 caaaaatgc 30700436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 41881537 - 41881436
Alignment:
Q  176 tgacttggccaaacacgcttatgtggactgacagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaa 275  Q
    |||| |||| ||||||||||||||| |||||||||||||   |||||| |||  |||||||||||||||||||  |||  | |||||||| |||||| ||    
T  41881537 tgacatggcaaaacacgcttatgtgtactgacagatgataagtgactagatttgagggaccaaaaccaaaaacacaaaattgcagagggatgaaattgaa 41881438  T
Q  276 aa 277  Q
    ||    
T  41881437 aa 41881436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 31796687 - 31796635
Alignment:
Q  307 cagaagatccctgactacattacagggaccaaaaccaaaaacgaaaagttaca 359  Q
    |||| |||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  31796687 cagatgatccctgactatattacagggaccaaaaccaaaaaggaaaaggtaca 31796635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 272
Target Start/End: Original strand, 32559111 - 32559191
Alignment:
Q  192 gcttatgtggactgacagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaatt 272  Q
    ||||| |||| ||||||||||||   ||||||| ||  ||||||||||| |||||||| |||  |||||||||||||||||    
T  32559111 gcttacgtggcctgacagatgataagtgactattttttagggaccaaaatcaaaaacgcaaatttacagagggacgaaatt 32559191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 347
Target Start/End: Complemental strand, 41083124 - 41083084
Alignment:
Q  307 cagaagatccctgactacattacagggaccaaaaccaaaaa 347  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  41083124 cagatgatccctgactatattacagggaccaaaaccaaaaa 41083084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 288
Target Start/End: Original strand, 44458771 - 44458883
Alignment:
Q  176 tgacttggccaaacacgcttatgtggactgacagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaa 275  Q
    |||| |||| ||||||||||||||| ||| |||||| |    |||||| |||  ||||||||||| |||||||| |||  | |||||||| |||||||||    
T  44458771 tgacatggcaaaacacgcttatgtgtactcacagatcaaaagtgactagatttgagggaccaaaatcaaaaacgcaaaattgcagagggatgaaattaaa 44458870  T
Q  276 aacacctaaatat 288  Q
    || || |||||||    
T  44458871 aaaacgtaaatat 44458883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 41879958 - 41880036
Alignment:
Q  35 gtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtcc 113  Q
    |||||||||||||||||| |||||||       |||||||||||| || |||||||||  ||| ||||| |||||||||    
T  41879958 gtgtttttggttttcgtctctgtatctttttttgttctaaaacaaaccttgtaagttataaacgttttgattttcgtcc 41880036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 6e-59; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 84 - 360
Target Start/End: Original strand, 31917062 - 31917346
Alignment:
Q  84 tgtaagttaataaccttttgcttttcgtccctcccgtcaaactctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggcagatgctgacttgg 183  Q
    |||||||||||||| ||||||||||||||| | |||||||||||  || ||||||   |||| |||  ||||||| ||| |||||| | |||||  ||||    
T  31917062 tgtaagttaataactttttgcttttcgtccataccgtcaaactcaattacaaaaacatcttgttggataacagtgtgtgccgtggcgggtgctggtttgg 31917161  T
Q  184 ccaaacacgcttatgtggactgacagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaacaccta 283  Q
    | ||||||| || ||||   ||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31917162 ctaaacacgtttgtgtgttgtgacatatgatccctaactatattacaggaaccaaaaccaaaaacgaaaaggtacaaagggacgaaattaaaaacaccta 31917261  T
Q  284 aata--------tgaaatttaggtggccttccagaagatccctgactacattacagggaccaaaaccaaaaacgaaaagttacaa 360  Q
    ||||        ||||||||||||||| ||||| | |||| ||||||| ||||||||||||||||| ||||| ||||||||||||    
T  31917262 aataacaaaatttgaaatttaggtggctttccatacgatctctgactatattacagggaccaaaacaaaaaatgaaaagttacaa 31917346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 25264363 - 25264462
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    |||||||||||||||||||||||||||||| ||||||       ||| |||||||| |||||||| |||||||| ||||| |||||||||||||||||||    
T  25264363 tgtaatttggcgtgtttttggttttcgtccttgtatctttttttgttttaaaacaatccctgtaaattaataactttttgattttcgtccctcccgtcaa 25264462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 25265941 - 25265842
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||||||||||||| |||||||||||||||||       ||| |||||||| |||| |||||||||||| ||||| |||||||||||||||||||    
T  25265941 tgtaatttggcgtgttttttgttttcgtccctgtatctttttttgttttaaaacaatccctataagttaataactttttgattttcgtccctcccgtcaa 25265842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 33295481 - 33295383
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||||||||||||| ||||| |||||||||||       ||||||||||||||| |||||||||||||| ||||| ||| |||||||||||||||    
T  33295481 tgtaatttggcgtgttttttgtttttgtccctgtatctttttt-gttctaaaacaacccttgtaagttaataactttttgatttccgtccctcccgtcaa 33295383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 70 - 259
Target Start/End: Original strand, 41912540 - 41912729
Alignment:
Q  70 tctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaaactctgttgcaaaaatgccttgctggcaaacagtgagtgacgtggc 169  Q
    ||||||||||||  |||||||||||||  ||||| ||||||||||  |  |||||||||  | |||||| | |||| |||| |||   | |||  ||||     
T  41912540 tctaaaacaaccattgtaagttaataatattttgtttttcgtcccgtctttcaaactctagtacaaaaaggtcttgttggctaacgacgtgtggtgtggt 41912639  T
Q  170 agatgctgacttggccaaacacgcttatgtggactgacagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtaca 259  Q
     | || ||||||||| ||||||| |||||| |||||||| ||||||| | ||||||||||||||||  ||||| ||||||||||||||||    
T  41912640 gggtgttgacttggctaaacacgtttatgtagactgacaaatgatccttaactatattacagggacacaaacctaaaacgaaaaggtaca 41912729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 33293961 - 33294062
Alignment:
Q  23 ttgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnn-gttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtc 121  Q
    |||||||||| || ||||||||||||||||| ||||||        ||||||||||||||||| ||| |||||||| ||||| |||||||||||||||||    
T  33293961 ttgtaatttgacgcgtttttggttttcgtccttgtatcttttttttgttctaaaacaacccctataaattaataactttttgattttcgtccctcccgtc 33294060  T
Q  122 aa 123  Q
    ||    
T  33294061 aa 33294062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 238 - 359
Target Start/End: Original strand, 41912736 - 41912865
Alignment:
Q  238 aaaccaaaaacgaaaaggtacagagggacgaaattaaaaacacctaaata--------tgaaatttaggtggccttccagaagatccctgactacattac 329  Q
    ||||| |||||||||||||||| | ||| |||||||||||||||| ||||        ||||||||||||||||||||||| ||||| |||| | |||||    
T  41912736 aaacctaaaacgaaaaggtacaaatggatgaaattaaaaacaccttaataacaaaatttgaaatttaggtggccttccagatgatccatgaccatattac 41912835  T
Q  330 agggaccaaaaccaaaaacgaaaagttaca 359  Q
    | ||| || || ||||||||||||| ||||    
T  41912836 aaggatcagaaacaaaaacgaaaaggtaca 41912865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 212 - 277
Target Start/End: Original strand, 31917298 - 31917363
Alignment:
Q  212 gatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||| ||||||||||||||||||||||||| ||||| |||||| |||| ||||| |||||||||||    
T  31917298 gatctctgactatattacagggaccaaaacaaaaaatgaaaagttacaaagggatgaaattaaaaa 31917363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 41912813 - 41912883
Alignment:
Q  207 cagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtacagagggacgaaattaaaaa 277  Q
    |||||||||| |||| |||||||| ||| || || |||||||||||||||||||| ||| |||||||||||    
T  41912813 cagatgatccatgaccatattacaaggatcagaaacaaaaacgaaaaggtacagaaggatgaaattaaaaa 41912883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 3158073 - 3157975
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtca 122  Q
    ||||| || ||||||||||||||||||||||||||||       |||||||||||  ||||||||||||  ||| |||||||||  |||||| ||||||    
T  3158073 tgtaagttcgcgtgtttttggttttcgtccctgtatctttttttgttctaaaacagaccctgtaagttataaacattttgctttcggtccctgccgtca 3157975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 138
Target Start/End: Complemental strand, 39886112 - 39885998
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||| || |||||||||||||||| |||||||||||        ||||||||||||||||||||||||  | | ||||| |||| |||||| ||||||     
T  39886112 tgtaagttcgcgtgtttttggttttagtccctgtatctttttttattctaaaacaacccctgtaagttataagcattttggttttagtccctgccgtcat 39886013  T
Q  124 actctgttgcaaaaa 138  Q
    | |||||| ||||||    
T  39886012 aatctgttacaaaaa 39885998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 286
Target Start/End: Complemental strand, 1650065 - 1649979
Alignment:
Q  204 tgacagatgatccctgactatattacagggaccaaaaccaaaaacgaaaaggtac----agagggacgaaattaaaaacacctaaat 286  Q
    |||||||||||| || ||||||||||| | | |||||||||||| |||||  |||    |||| |||||||||||||||| ||||||    
T  1650065 tgacagatgatctctaactatattacaagaatcaaaaccaaaaatgaaaaattacagagagagagacgaaattaaaaacatctaaat 1649979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 138
Target Start/End: Original strand, 39884639 - 39884753
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||| || |||||||||||||||| |||||||||||       ||||||||| ||||| |||||||||  | | ||||| |||| |||||| || |||     
T  39884639 tgtaagttcgcgtgtttttggttttagtccctgtatctttttttgttctaaaataacccttgtaagttataagcattttggttttagtccctgccttcat 39884738  T
Q  124 actctgttgcaaaaa 138  Q
    | |||||| ||||||    
T  39884739 aatctgttacaaaaa 39884753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0633 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0633
Description:

Target: scaffold0633; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 6930 - 6826
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||||||||||||||||||||||| ||||||        |||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||    
T  6930 tgtaatttggcgtgtttttggttttcgtctctgtatatttttttgttctaaaacaacctctgtaagttaataactttttgcttttcgtctctcccgtcaa 6831  T
Q  124 actct 128  Q
    |||||    
T  6830 actct 6826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0489 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0489
Description:

Target: scaffold0489; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 6851 - 6752
Alignment:
Q  24 tgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccctcccgtcaa 123  Q
    ||||||||||||||||||||||||| || ||||||||       ||||||||| | |||||||| ||||||||| ||||| |||||  ||||||||||||    
T  6851 tgtaatttggcgtgtttttggtttttgttcctgtatctttttttgttctaaaatatcccctgtatgttaataactttttgattttctaccctcccgtcaa 6752  T

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Target: scaffold1176 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 2073 - 2165
Alignment:
Q  23 ttgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttctaaaacaacccctgtaagttaataaccttttgcttttcgtccct 115  Q
    |||||| || ||||||||||||||| ||||||||||||       |||||||||||||||| ||||||||  ||| ||||| |||| ||||||    
T  2073 ttgtaagttcgcgtgtttttggtttccgtccctgtatctttttttgttctaaaacaacccccgtaagttataaacgttttggttttagtccct 2165  T

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