View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21677_high_3 (Length: 377)

Name: NF21677_high_3
Description: NF21677
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21677_high_3
NF21677_high_3
[»] chr3 (30 HSPs)
chr3 (1-171)||(14764454-14764624)
chr3 (1-171)||(3802220-3802390)
chr3 (1-171)||(23372202-23372372)
chr3 (1-171)||(51299783-51299953)
chr3 (1-171)||(12304424-12304602)
chr3 (76-171)||(54519847-54519942)
chr3 (78-171)||(9532508-9532601)
chr3 (1-106)||(20249462-20249567)
chr3 (1-106)||(29545478-29545583)
chr3 (1-91)||(9532612-9532702)
chr3 (4-106)||(38312478-38312580)
chr3 (111-169)||(18899719-18899777)
chr3 (108-169)||(20249665-20249726)
chr3 (113-169)||(10834711-10834767)
chr3 (99-166)||(17548768-17548835)
chr3 (99-169)||(1989791-1989861)
chr3 (99-169)||(38312643-38312713)
chr3 (108-169)||(29545683-29545744)
chr3 (99-166)||(13026887-13026954)
chr3 (99-166)||(34853095-34853162)
chr3 (52-106)||(18888834-18888888)
chr3 (52-116)||(18899863-18899927)
chr3 (108-169)||(180069-180130)
chr3 (114-169)||(23396572-23396627)
chr3 (108-166)||(18958287-18958345)
chr3 (110-168)||(54972689-54972747)
chr3 (110-168)||(54975299-54975357)
chr3 (110-168)||(54977909-54977967)
chr3 (110-169)||(55292996-55293055)
chr3 (1-39)||(11306065-11306103)
[»] chr5 (28 HSPs)
chr5 (1-171)||(41878310-41878480)
chr5 (1-171)||(23113061-23113231)
chr5 (1-171)||(38146077-38146247)
chr5 (1-168)||(22339331-22339498)
chr5 (1-168)||(22335793-22335960)
chr5 (2-106)||(28371752-28371856)
chr5 (1-111)||(22749494-22749604)
chr5 (1-111)||(9775210-9775320)
chr5 (1-106)||(37599619-37599724)
chr5 (1-106)||(42959828-42959933)
chr5 (1-106)||(19510776-19510881)
chr5 (98-171)||(9775101-9775174)
chr5 (99-169)||(19510664-19510734)
chr5 (108-169)||(22469508-22469569)
chr5 (99-166)||(10816060-10816127)
chr5 (99-166)||(23538059-23538126)
chr5 (99-169)||(22358456-22358526)
chr5 (99-169)||(22749363-22749433)
chr5 (99-169)||(24277902-24277972)
chr5 (99-169)||(24384241-24384311)
chr5 (108-169)||(42959717-42959778)
chr5 (111-169)||(37599777-37599835)
chr5 (110-168)||(29325941-29325999)
chr5 (53-108)||(10034977-10035032)
chr5 (110-169)||(43120581-43120640)
chr5 (110-169)||(43124114-43124173)
chr5 (1-39)||(22232929-22232967)
chr5 (52-100)||(21888417-21888465)
[»] chr2 (26 HSPs)
chr2 (1-168)||(19663150-19663317)
chr2 (1-171)||(20260507-20260677)
chr2 (1-171)||(10685948-10686118)
chr2 (2-168)||(6261873-6262039)
chr2 (1-106)||(9241079-9241184)
chr2 (1-106)||(6482098-6482203)
chr2 (1-106)||(6485565-6485670)
chr2 (99-166)||(26895971-26896038)
chr2 (99-169)||(6481986-6482056)
chr2 (99-169)||(6485453-6485523)
chr2 (99-166)||(6478596-6478663)
chr2 (99-169)||(9240919-9240989)
chr2 (52-111)||(21074235-21074294)
chr2 (99-166)||(22702738-22702805)
chr2 (99-169)||(23374666-23374736)
chr2 (99-164)||(10040507-10040572)
chr2 (108-154)||(19803523-19803569)
chr2 (49-91)||(29753004-29753046)
chr2 (108-153)||(24275940-24275985)
chr2 (108-166)||(22109202-22109260)
chr2 (110-169)||(31502927-31502986)
chr2 (110-169)||(31505493-31505552)
chr2 (1-39)||(23290778-23290816)
chr2 (52-100)||(20914594-20914642)
chr2 (55-91)||(23148437-23148473)
chr2 (55-91)||(23560227-23560263)
[»] chr7 (51 HSPs)
chr7 (1-171)||(29795413-29795583)
chr7 (1-171)||(29799232-29799402)
chr7 (1-171)||(18871547-18871717)
chr7 (1-169)||(146752-146920)
chr7 (1-106)||(15166520-15166625)
chr7 (1-106)||(16007830-16007935)
chr7 (1-111)||(23666151-23666261)
chr7 (1-104)||(10897507-10897610)
chr7 (1-106)||(14421101-14421205)
chr7 (1-106)||(14565456-14565561)
chr7 (1-111)||(11302596-11302706)
chr7 (99-171)||(18606588-18606660)
chr7 (98-171)||(23666297-23666370)
chr7 (99-169)||(11660569-11660639)
chr7 (99-169)||(13255217-13255287)
chr7 (99-171)||(14565338-14565410)
chr7 (99-169)||(14420989-14421059)
chr7 (99-166)||(16109729-16109796)
chr7 (99-166)||(29003578-29003645)
chr7 (99-166)||(34956892-34956959)
chr7 (99-166)||(48742929-48742996)
chr7 (99-169)||(11302465-11302535)
chr7 (108-169)||(10897662-10897723)
chr7 (99-168)||(16572857-16572926)
chr7 (99-168)||(16592736-16592805)
chr7 (99-166)||(833753-833820)
chr7 (99-166)||(1198933-1199000)
chr7 (52-111)||(18606729-18606788)
chr7 (99-169)||(15166408-15166478)
chr7 (99-167)||(13850332-13850400)
chr7 (108-159)||(16007681-16007732)
chr7 (108-166)||(837791-837849)
chr7 (108-166)||(1202971-1203029)
chr7 (1-61)||(16109359-16109419)
chr7 (1-61)||(837234-837294)
chr7 (1-61)||(1202414-1202474)
chr7 (110-169)||(35365639-35365698)
chr7 (110-168)||(4992853-4992911)
chr7 (110-168)||(16005682-16005740)
chr7 (108-169)||(14189719-14189780)
chr7 (108-169)||(14192474-14192535)
chr7 (1-61)||(833238-833298)
chr7 (1-61)||(1198418-1198478)
chr7 (52-99)||(13678156-13678204)
chr7 (110-169)||(8775664-8775723)
chr7 (110-169)||(21744005-21744064)
chr7 (1-39)||(3290072-3290110)
chr7 (1-38)||(14946129-14946166)
chr7 (1-38)||(15373722-15373759)
chr7 (55-100)||(16668811-16668856)
chr7 (51-100)||(45185326-45185375)
[»] chr4 (31 HSPs)
chr4 (1-171)||(15533469-15533639)
chr4 (1-171)||(36037202-36037372)
chr4 (76-171)||(49548816-49548911)
chr4 (99-169)||(18211877-18211947)
chr4 (99-169)||(24048106-24048176)
chr4 (108-169)||(15989484-15989545)
chr4 (99-166)||(4831994-4832061)
chr4 (99-166)||(4835289-4835356)
chr4 (99-166)||(14047474-14047541)
chr4 (99-166)||(30146038-30146105)
chr4 (1-61)||(30146601-30146661)
chr4 (52-99)||(18212014-18212061)
chr4 (1-61)||(14047854-14047914)
chr4 (113-169)||(33685124-33685180)
chr4 (114-169)||(20900137-20900192)
chr4 (114-169)||(27027292-27027347)
chr4 (108-169)||(3336815-3336876)
chr4 (108-166)||(4828705-4828766)
chr4 (135-169)||(17142574-17142608)
chr4 (108-165)||(13877452-13877509)
chr4 (108-169)||(13881147-13881208)
chr4 (110-169)||(4170366-4170425)
chr4 (110-169)||(14698091-14698150)
chr4 (111-166)||(28916798-28916853)
chr4 (110-169)||(31131995-31132054)
chr4 (110-169)||(41791042-41791101)
chr4 (110-169)||(43258613-43258672)
chr4 (1-39)||(2585459-2585497)
chr4 (1-38)||(16221083-16221120)
chr4 (1-38)||(41529372-41529409)
chr4 (106-166)||(28382271-28382331)
[»] chr6 (21 HSPs)
chr6 (1-171)||(4476046-4476216)
chr6 (1-171)||(12941471-12941653)
chr6 (1-111)||(28290530-28290640)
chr6 (110-169)||(24266445-24266504)
chr6 (99-169)||(221392-221462)
chr6 (111-169)||(23351758-23351816)
chr6 (99-166)||(29848909-29848976)
chr6 (99-169)||(13763617-13763687)
chr6 (99-169)||(28290701-28290771)
chr6 (99-166)||(16133862-16133929)
chr6 (99-166)||(29417306-29417373)
chr6 (99-166)||(19444538-19444605)
chr6 (108-166)||(23621625-23621683)
chr6 (50-99)||(25395873-25395922)
chr6 (110-169)||(2288561-2288620)
chr6 (108-166)||(8717439-8717496)
chr6 (1-38)||(14582144-14582181)
chr6 (1-38)||(14616558-14616595)
chr6 (56-93)||(22346441-22346478)
chr6 (101-169)||(15538629-15538697)
chr6 (56-100)||(25749581-25749625)
[»] scaffold0544 (1 HSPs)
scaffold0544 (1-171)||(3175-3345)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-111)||(109934-110044)
scaffold0026 (99-169)||(109803-109873)
[»] scaffold1427 (1 HSPs)
scaffold1427 (76-171)||(429-524)
[»] scaffold0124 (2 HSPs)
scaffold0124 (1-106)||(37143-37248)
scaffold0124 (99-169)||(37383-37453)
[»] chr8 (25 HSPs)
chr8 (1-106)||(8729338-8729443)
chr8 (1-111)||(27942499-27942609)
chr8 (1-106)||(44476013-44476118)
chr8 (1-106)||(44479275-44479380)
chr8 (99-169)||(20453899-20453969)
chr8 (99-169)||(21862045-21862115)
chr8 (111-169)||(44475901-44475959)
chr8 (111-169)||(44479163-44479221)
chr8 (108-169)||(8729469-8729530)
chr8 (111-169)||(20459521-20459579)
chr8 (99-169)||(43111685-43111755)
chr8 (108-169)||(44431311-44431372)
chr8 (111-169)||(32949394-32949452)
chr8 (108-169)||(19881557-19881618)
chr8 (99-159)||(38186330-38186390)
chr8 (110-169)||(28853317-28853376)
chr8 (112-169)||(365349-365406)
chr8 (110-169)||(6608941-6609000)
chr8 (110-169)||(7301840-7301899)
chr8 (108-167)||(15005088-15005147)
chr8 (110-169)||(45135627-45135686)
chr8 (1-39)||(19988483-19988521)
chr8 (108-166)||(24708418-24708476)
chr8 (1-38)||(21322548-21322585)
chr8 (1-38)||(21327136-21327173)
[»] chr1 (25 HSPs)
chr1 (1-106)||(16371283-16371388)
chr1 (1-106)||(20438857-20438962)
chr1 (99-169)||(19209253-19209323)
chr1 (99-169)||(28311850-28311920)
chr1 (99-166)||(13529104-13529171)
chr1 (110-169)||(16371127-16371186)
chr1 (108-169)||(20439012-20439073)
chr1 (99-166)||(29534179-29534246)
chr1 (99-166)||(32649529-32649596)
chr1 (99-169)||(16400393-16400463)
chr1 (1-61)||(29534763-29534823)
chr1 (1-61)||(32649926-32649986)
chr1 (108-169)||(28204955-28205016)
chr1 (114-169)||(18251856-18251911)
chr1 (114-169)||(18269859-18269914)
chr1 (114-169)||(18274537-18274592)
chr1 (110-169)||(20578831-20578890)
chr1 (110-169)||(20586524-20586583)
chr1 (114-169)||(20900680-20900735)
chr1 (108-166)||(21181812-21181870)
chr1 (120-169)||(16397625-16397674)
chr1 (110-169)||(293531-293590)
chr1 (110-168)||(45306662-45306720)
chr1 (1-38)||(20824639-20824676)
chr1 (1-37)||(16883834-16883870)
[»] scaffold0337 (2 HSPs)
scaffold0337 (99-169)||(10581-10651)
scaffold0337 (52-100)||(10512-10560)
[»] scaffold0216 (1 HSPs)
scaffold0216 (99-169)||(20968-21038)
[»] scaffold0607 (1 HSPs)
scaffold0607 (99-169)||(2406-2476)
[»] scaffold0338 (1 HSPs)
scaffold0338 (108-169)||(4428-4489)
[»] scaffold0012 (1 HSPs)
scaffold0012 (109-169)||(223874-223934)
[»] scaffold0117 (1 HSPs)
scaffold0117 (108-166)||(41535-41593)
[»] scaffold0021 (1 HSPs)
scaffold0021 (108-166)||(145780-145838)
[»] scaffold0188 (1 HSPs)
scaffold0188 (111-166)||(887-942)
[»] scaffold0089 (2 HSPs)
scaffold0089 (115-169)||(1558-1612)
scaffold0089 (52-111)||(1758-1817)
[»] scaffold0447 (1 HSPs)
scaffold0447 (99-164)||(13666-13731)
[»] scaffold0383 (1 HSPs)
scaffold0383 (99-164)||(11661-11726)
[»] scaffold0042 (1 HSPs)
scaffold0042 (108-169)||(50454-50515)
[»] scaffold0825 (1 HSPs)
scaffold0825 (99-169)||(2138-2208)
[»] scaffold0003 (1 HSPs)
scaffold0003 (99-169)||(137279-137349)
[»] scaffold0034 (1 HSPs)
scaffold0034 (108-169)||(35262-35323)
[»] scaffold0970 (1 HSPs)
scaffold0970 (118-166)||(3752-3800)
[»] scaffold0635 (1 HSPs)
scaffold0635 (99-164)||(6498-6563)
[»] scaffold0139 (1 HSPs)
scaffold0139 (52-99)||(16301-16348)
[»] scaffold0004 (1 HSPs)
scaffold0004 (108-154)||(59012-59058)
[»] scaffold0413 (1 HSPs)
scaffold0413 (99-146)||(10316-10363)
[»] scaffold0151 (1 HSPs)
scaffold0151 (108-166)||(1753-1811)
[»] scaffold0500 (1 HSPs)
scaffold0500 (108-169)||(12075-12136)
[»] scaffold0381 (1 HSPs)
scaffold0381 (108-169)||(14334-14395)
[»] scaffold0278 (1 HSPs)
scaffold0278 (108-169)||(22511-22572)
[»] scaffold0169 (1 HSPs)
scaffold0169 (50-99)||(5800-5849)
[»] scaffold0094 (1 HSPs)
scaffold0094 (50-99)||(51004-51053)
[»] scaffold0066 (1 HSPs)
scaffold0066 (113-166)||(47934-47987)
[»] scaffold0058 (1 HSPs)
scaffold0058 (108-169)||(40663-40724)
[»] scaffold0317 (1 HSPs)
scaffold0317 (52-99)||(49-97)
[»] scaffold0525 (1 HSPs)
scaffold0525 (114-169)||(11546-11601)
[»] scaffold0141 (1 HSPs)
scaffold0141 (110-169)||(32531-32590)
[»] scaffold0107 (1 HSPs)
scaffold0107 (110-169)||(2524-2583)
[»] scaffold0049 (1 HSPs)
scaffold0049 (110-169)||(82222-82281)
[»] scaffold0044 (1 HSPs)
scaffold0044 (110-169)||(6376-6435)
[»] scaffold0556 (1 HSPs)
scaffold0556 (111-169)||(9162-9220)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-39)||(8322-8360)
[»] scaffold0167 (1 HSPs)
scaffold0167 (2-56)||(19623-19677)
[»] scaffold0106 (2 HSPs)
scaffold0106 (1-39)||(47051-47089)
scaffold0106 (1-39)||(51324-51362)
[»] scaffold0102 (1 HSPs)
scaffold0102 (51-93)||(44458-44500)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-39)||(95694-95732)
[»] scaffold1290 (1 HSPs)
scaffold1290 (51-100)||(1527-1576)
[»] scaffold0126 (1 HSPs)
scaffold0126 (1-38)||(38195-38232)
[»] scaffold0072 (1 HSPs)
scaffold0072 (1-38)||(55762-55799)
[»] scaffold0020 (1 HSPs)
scaffold0020 (55-100)||(177752-177797)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-38)||(258345-258382)
[»] scaffold0326 (1 HSPs)
scaffold0326 (52-100)||(5673-5721)
[»] scaffold0244 (2 HSPs)
scaffold0244 (52-100)||(9394-9442)
scaffold0244 (52-100)||(13467-13515)


Alignment Details
Target: chr3 (Bit Score: 163; Significance: 6e-87; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 14764454 - 14764624
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14764454 gaattattattatgacagggtgatagatttaattgatgagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 14764553  T
Q  101 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14764554 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 14764624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 3802390 - 3802220
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  3802390 gaattattattatgacagggtgatagatttaattgatgagttagaaatctattattgatgatattgttgattatgaaatatatacatatattaggtaatt 3802291  T
Q  101 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3802290 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 3802220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 23372202 - 23372372
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||||||  |||||||||||  ||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23372202 gaattattacgatgacagggtgtaagattaaattgaagagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 23372301  T
Q  101 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 171  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  23372302 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagattaagaagtaagaacattattgttaa 23372372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 51299953 - 51299783
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||||||  |||||||||||  ||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51299953 gaattattacgatgacagggtgtaagattaaattgaagagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 51299854  T
Q  101 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 171  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  51299853 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagattaagaagtaagaacattattgttaa 51299783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 12304602 - 12304424
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatat--------t 92  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||        |    
T  12304602 gaattattattatgacagggtgatagatttaattgatgagttagatatttattattgatgatattgttgattatgaaatatatatatatatatatatatt 12304503  T
Q  93 ggataattgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12304502 ggataattgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 12304424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 76 - 171
Target Start/End: Complemental strand, 54519942 - 54519847
Alignment:
Q  76 aaatatatacatatattggataattgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 171  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  54519942 aaatatatacatatattggataattgtagttatcgtcgttgttggttgaattagtaagtgttactaaaggtaaagaagtaagaacattattgttaa 54519847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 78 - 171
Target Start/End: Complemental strand, 9532601 - 9532508
Alignment:
Q  78 atatatacatatattggataattgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 171  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9532601 atatatatatatattggataattgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 9532508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 20249462 - 20249567
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||||||||||||||||||| |||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20249462 gaattattattatgacagggtgttagatttaattgatgaattagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 20249561  T
Q  101 gtagtt 106  Q
    ||||||    
T  20249562 gtagtt 20249567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 29545478 - 29545583
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||| ||||||||||||||||| |||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29545478 gaatcattattatgacagggtgttagatttaattgatgaattagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 29545577  T
Q  101 gtagtt 106  Q
    ||||||    
T  29545578 gtagtt 29545583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 9532702 - 9532612
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatat 91  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||| || ||||||||||||||    
T  9532702 gaattattattatgacagggtgatagatttaattgatgagttagatatttattattgatgatattgttgattaagagatatatacatatat 9532612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 38312478 - 38312580
Alignment:
Q  4 ttattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgta 103  Q
    |||||||||||||| |||| |||||| |||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||    
T  38312478 ttattattatgacaaggtgttagatttaattgatgaattagatatctattaatgatgatattgttgattatgaaatatatacatatattaaataattgta 38312577  T
Q  104 gtt 106  Q
    |||    
T  38312578 gtt 38312580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 18899777 - 18899719
Alignment:
Q  111 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18899777 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 18899719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 20249665 - 20249726
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20249665 tcgtcgttgttggttgaattagcaagtgttactaaagttaaagaagtaagaacattattgtt 20249726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 113 - 169
Target Start/End: Original strand, 10834711 - 10834767
Alignment:
Q  113 gttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10834711 gttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 10834767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 17548768 - 17548835
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17548768 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaggaacattatt 17548835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 1989791 - 1989861
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  1989791 ttgttgttgtcgtcgttgttggttgaattagtaagtgttaataaagttaaagaagtaagaatattattgtt 1989861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 38312643 - 38312713
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  38312643 ttgttgttgtcgtcgttgttggttgaattaacaagtgttactaaagttaaagaagtaagaacattattgtt 38312713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 29545683 - 29545744
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  29545683 tcgtcgttgctggttgaattagcaagtgttactaaagttaaagaagtaagaacattattgtt 29545744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 13026887 - 13026954
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13026887 ttgtcgttgtcgtctttgttggttgaattagtaagtgttactaaagttaaagaagtaagaatattatt 13026954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 34853095 - 34853162
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  34853095 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaaattaaagaagtaagaatattatt 34853162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 18888888 - 18888834
Alignment:
Q  52 ttattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 106  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18888888 ttattgatgatgttgttgattatgaaatatatacatatattggataattgtagtt 18888834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 18899927 - 18899863
Alignment:
Q  52 ttattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttg 116  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  18899927 ttattgatcatgttgttgattatgaaatatatacatatattggataattgtagttgtcgttgttg 18899863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 180069 - 180130
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||||||||||||||||||| ||||| | |||||||  |||||||||||||    
T  180069 tcgtcgttgttggttgaattagtaagtgttattaaagctgaagaagtgtgaacattattgtt 180130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 23396572 - 23396627
Alignment:
Q  114 ttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||| ||||||||| ||||||| |||||||| |||||||||||||    
T  23396572 ttgttggttgaattaataagtgttattaaagttgaagaagtatgaacattattgtt 23396627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 18958345 - 18958287
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||| |||||||||||||||||||||||||| |||| || |||||||| ||| ||||||    
T  18958345 tcgttgttgttggttgaattagtaagtgttattaaaattgaagaagtatgaatattatt 18958287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 54972747 - 54972689
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgt 168  Q
    ||||||||||||||| |||||||| |||| ||||||| |||||||| ||| ||||||||    
T  54972747 gtcgttgttggttgatttagtaagagttattaaagttgaagaagtatgaatattattgt 54972689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 54975357 - 54975299
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgt 168  Q
    ||||||||||||||| |||||||| |||| ||||||| |||||||| ||| ||||||||    
T  54975357 gtcgttgttggttgatttagtaagagttattaaagttgaagaagtatgaatattattgt 54975299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 54977967 - 54977909
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgt 168  Q
    ||||||||||||||| |||||||| |||| ||||||| |||||||| ||| ||||||||    
T  54977967 gtcgttgttggttgatttagtaagagttattaaagttgaagaagtatgaatattattgt 54977909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 55292996 - 55293055
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||| ||||||||| |||||||||||| |||||| | |||||||| ||| |||||||||    
T  55292996 gtcgtcgttggttgatttagtaagtgtttctaaagatgaagaagtatgaatattattgtt 55293055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 11306065 - 11306103
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatga 39  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  11306065 gaattattattatgtcagggtgttagattcaattgatga 11306103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 159; Significance: 1e-84; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 41878310 - 41878480
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41878310 gaattatttttatgacagggtgatagatttaattgatgagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 41878409  T
Q  101 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41878410 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 41878480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 23113061 - 23113231
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||||||||||||||||||| |||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23113061 gaattattattatgacagggtgttagatttaattgatgagttatatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 23113160  T
Q  101 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23113161 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 23113231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 38146077 - 38146247
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||||||||||||| |||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38146077 gaattattattatgatagggtgttagatttaattgatgagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 38146176  T
Q  101 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 171  Q
      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38146177 taagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 38146247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 22339498 - 22339331
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22339498 gaattattattatgacagggtgttagatttaattgatgagttagatatctattattgatgatattgttcattatgaaatatatacatatattggataatt 22339399  T
Q  101 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgt 168  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  22339398 gtagttatcgtcgttgttggttgaattagtaactgttactaaagttaaaggagtaagaacattattgt 22339331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 22335960 - 22335793
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||| |||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22335960 gaattgttattatgacagggtgttagatttaattgatgagttagatatctattattgatgatattgttcattatgaaatatatacatatattggataatt 22335861  T
Q  101 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgt 168  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  22335860 gtagttatcgtcgttgttggttgaattagtaactgttactaaagttaaaggagtaagaacattattgt 22335793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 28371752 - 28371856
Alignment:
Q  2 aattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattg 101  Q
    ||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28371752 aattattattatgacagggtgttagatttaattgatgagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataattg 28371851  T
Q  102 tagtt 106  Q
    |||||    
T  28371852 tagtt 28371856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 22749604 - 22749494
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||||||||||||||||||| |||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22749604 gaattattattatgacagggtgttagatttaattgatgaattagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 22749505  T
Q  101 gtagttatcgt 111  Q
    |||||| ||||    
T  22749504 gtagttgtcgt 22749494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 9775320 - 9775210
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||||||||||||||||||||||| ||| ||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9775320 gaattattattatgacagggtgatatatttaattggtgagttagatatctattattgatgatattattgattatgaaatatatacatatattggataatt 9775221  T
Q  101 gtagttatcgt 111  Q
    |||||| ||||    
T  9775220 gtagttgtcgt 9775210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 37599619 - 37599724
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||||||||||||||||||| |||||| |||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37599619 gaattattattatgacagggtgttagatttaattgatgaattagatatctattattgatgatattgttgactatgaaatatatacatatattggataatt 37599718  T
Q  101 gtagtt 106  Q
    ||||||    
T  37599719 gtagtt 37599724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 42959933 - 42959828
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||||||||||||||||||| |||||| |||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  42959933 gaattattattatgacagggtgttagatttaattgatgaattagatatctattattggtgatattgttgattatgaaatatatacatatattggataatt 42959834  T
Q  101 gtagtt 106  Q
    ||||||    
T  42959833 gtagtt 42959828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 19510881 - 19510776
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||||||||||||||||| || |||||| |||||||||  | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19510881 gaattattattatgacaggatgttagatttaattgatgaattggatatctattattgatgatattgttgatcatgaaatatatacatatattggataatt 19510782  T
Q  101 gtagtt 106  Q
    ||||||    
T  19510781 gtagtt 19510776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 9775174 - 9775101
Alignment:
Q  98 attgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 171  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  9775174 attgttgttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaataacattattgttaa 9775101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 19510734 - 19510664
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19510734 ttgttgttgtcgtcgttgttggttgaattagcaagtgttactaaagttaaagaagtaagaacattattgtt 19510664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 22469569 - 22469508
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22469569 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaatattattgtt 22469508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 10816127 - 10816060
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10816127 ttgtcgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaatattatt 10816060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 23538126 - 23538059
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23538126 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaatattatt 23538059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 22358456 - 22358526
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22358456 ttgttgttgtcgtcgttgttaattgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 22358526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 22749433 - 22749363
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  22749433 ttgttgttgtcgtcgttgttggttgaattagaaagtgttactaaagttaaagaagtaagaatattattgtt 22749363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 24277902 - 24277972
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  24277902 ttgttgttgtcgtcgttgttggttgaattagtaagtgttattaaagttgaagaagtaagaacattattgtt 24277972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 24384311 - 24384241
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  24384311 ttgttgttgtcgtcgttgttggttgaattagtaagtgttattaaagttgaagaagtaagaacattattgtt 24384241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 42959778 - 42959717
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  42959778 tcgtcgttgctggttgaattagaaagtgttactaaagttaaagaagtaagaacattattgtt 42959717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 37599777 - 37599835
Alignment:
Q  111 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  37599777 tcgttgatggttgaattagcaagtgttactaaagttaaagaagtaagaacattattgtt 37599835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 168
Target Start/End: Original strand, 29325941 - 29325999
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgt 168  Q
    ||||||||||||||| |||||||| |||| ||||||| |||||||| ||| ||||||||    
T  29325941 gtcgttgttggttgatttagtaagagttattaaagttgaagaagtatgaatattattgt 29325999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 10035032 - 10034977
Alignment:
Q  53 tattgatgatattgttgattatgaaatatatacatatattggataattgtagttat 108  Q
    |||||||||| ||||| |||||||||||||||  ||||||| |||||||| |||||    
T  10035032 tattgatgatgttgttaattatgaaatatatatgtatattgaataattgttgttat 10034977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 43120640 - 43120581
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||| |||||||| |||| ||||||  |||||||| ||| |||||||||    
T  43120640 gtcgttgttggttgatttagtaagagttattaaagtcgaagaagtatgaatattattgtt 43120581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 43124173 - 43124114
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||| |||||||| |||| ||||||  |||||||| ||| |||||||||    
T  43124173 gtcgttgttggttgatttagtaagagttattaaagtcgaagaagtatgaatattattgtt 43124114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22232929 - 22232967
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatga 39  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  22232929 gaattattattatgatagggtgttagattcaattgatga 22232967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 100
Target Start/End: Complemental strand, 21888465 - 21888417
Alignment:
Q  52 ttattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||||||||| ||||| |||||||||||||||  ||||||| ||||||    
T  21888465 ttattgatgatgttgttaattatgaaatatatatgtatattgaataatt 21888417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 156; Significance: 8e-83; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 19663150 - 19663317
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19663150 gaattattattatgacagggtgttagatttaattgatgagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 19663249  T
Q  101 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgt 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19663250 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgt 19663317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 20260677 - 20260507
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20260677 gaattattattatgacagggtgatatatttaattgatgagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 20260578  T
Q  101 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 171  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20260577 gtagttatcgtcgtcgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 20260507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 10685948 - 10686118
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10685948 gaattattattatgacagggtgatagatttaattgatgagttagatatttattattgacgatattgttgattatgaaatatatacatatattggataatt 10686047  T
Q  101 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 171  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10686048 gtagttatcgtcgtcgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 10686118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 2 - 168
Target Start/End: Original strand, 6261873 - 6262039
Alignment:
Q  2 aattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattg 101  Q
    ||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6261873 aattattattatgacagggtgttagatttaattgatgagttagatatctattattgatgatattgttgattatgaaatatatacatatattgaataattg 6261972  T
Q  102 tagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgt 168  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6261973 tagttatcgtcgttgttggttgaattagtaactgttactaaagttaaagaagtaagaacattattgt 6262039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 9241184 - 9241079
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||||||||||||||||||| |||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  9241184 gaattattattatgacagggtgttagatttaattgatgaattagatatctattattgatgatattgttgattatgaaatatatacatatattggatattt 9241085  T
Q  101 gtagtt 106  Q
    ||||||    
T  9241084 gtagtt 9241079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 6482203 - 6482098
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||||||||||||||||| || |||||| |||||||||  | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6482203 gaattattattatgacaggatgttagatttaattgatgaattggatatctattattgatgatattgttgatcatgaaatatatacatatattggataatt 6482104  T
Q  101 gtagtt 106  Q
    ||||||    
T  6482103 gtagtt 6482098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 6485670 - 6485565
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||||||||||||||||| || |||||| |||||||||  | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6485670 gaattattattatgacaggatgttagatttaattgatgaattggatatctattattgatgatattgttgatcatgaaatatatacatatattggataatt 6485571  T
Q  101 gtagtt 106  Q
    ||||||    
T  6485570 gtagtt 6485565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 26896038 - 26895971
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26896038 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 26895971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 6482056 - 6481986
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6482056 ttgttgttgtcgtcgttgttggttgaattagcaagtgttactaaagttaaagaagtaagaacattattgtt 6481986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 6485523 - 6485453
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6485523 ttgttgttgtcgtcgttgttggttgaattagcaagtgttactaaagttaaagaagtaagaacattattgtt 6485453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 6478596 - 6478663
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6478596 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaggaacattatt 6478663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 9240989 - 9240919
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  9240989 ttgttgttgtcgtcgttgttggttgaactagcaagtgttactaaagttaaagaagtaagaacattattgtt 9240919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 21074235 - 21074294
Alignment:
Q  52 ttattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgt 111  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21074235 ttattgatgatgttgttgattatgaaatatatacatatattggataattgtagttgtcgt 21074294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 22702805 - 22702738
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  22702805 ttgttgttgtcgtcgttgttgattgaattagtaagtgttactaaagttaaagaagtaagaatattatt 22702738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 23374736 - 23374666
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||| |||||    
T  23374736 ttgttgttgtcgtcgttgttggttgaattagtaagtgttattaaagttgaagaagtatgaacatttttgtt 23374666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 10040507 - 10040572
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacatta 164  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||  ||||||| ||| ||||    
T  10040507 ttgtggttgtcgtcgttgttggttgaattagtaagtgttactaaagttgtagaagtatgaatatta 10040572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 154
Target Start/End: Complemental strand, 19803569 - 19803523
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagt 154  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  19803569 tcgtcgttgttggttgaattagtaagtgttattaaagttgaagaagt 19803523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 29753004 - 29753046
Alignment:
Q  49 ctattattgatgatattgttgattatgaaatatatacatatat 91  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  29753004 ctattattgatgatattgttgattatgaaatatatatatatat 29753046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 24275940 - 24275985
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaag 153  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||    
T  24275940 tcgtcgttgttggttgaattagtaagtgttattaaagttgaagaag 24275985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 22109260 - 22109202
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||||||||||| ||| |||||||||||||| |||| || |||||||| ||||||||||    
T  22109260 tcgtcgttgttgattggattagtaagtgttattaaaattgaagaagtatgaacattatt 22109202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 31502986 - 31502927
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||| |||||||| |||| ||||||  |||||||| ||| |||||||||    
T  31502986 gtcgttgttggttgatttagtaagagttattaaagtcgaagaagtatgaatattattgtt 31502927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 31505552 - 31505493
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||| |||||||| |||| ||||||  |||||||| ||| |||||||||    
T  31505552 gtcgttgttggttgatttagtaagagttattaaagtcgaagaagtatgaatattattgtt 31505493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 23290816 - 23290778
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatga 39  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  23290816 gaattattattatgatagggtgttagattcaattgatga 23290778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 20914594 - 20914642
Alignment:
Q  52 ttattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||||||||| ||||| |||||||||||||||  ||||||| ||||||    
T  20914594 ttattgatgatgttgttaattatgaaatatatatgtatattgaataatt 20914642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 91
Target Start/End: Complemental strand, 23148473 - 23148437
Alignment:
Q  55 ttgatgatattgttgattatgaaatatatacatatat 91  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  23148473 ttgatgatgttgttgattatgaaatatatatatatat 23148437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 91
Target Start/End: Complemental strand, 23560263 - 23560227
Alignment:
Q  55 ttgatgatattgttgattatgaaatatatacatatat 91  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  23560263 ttgatgatgttgttgattatgaaatatatatatatat 23560227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 155; Significance: 3e-82; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 29795583 - 29795413
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29795583 gaattattattatgacagggtgatatatttaattgatgagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 29795484  T
Q  101 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 171  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29795483 gtagttatcgtcgtcgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 29795413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 29799402 - 29799232
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29799402 gaattattattatgacagggtgatatatttaattgatgagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 29799303  T
Q  101 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 171  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29799302 gtagttatcgtcgtcgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 29799232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 18871717 - 18871547
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||||||| |||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18871717 gaattattactatgacagggtgttagattaaattgaagagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 18871618  T
Q  101 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18871617 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 18871547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 146920 - 146752
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||||||||||||| |||||| |||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  146920 gaattattattatgatagggtgttagatttaattgatgagttagatatatattattgatgatattgttgattatgaaatatatacatatattggataatt 146821  T
Q  101 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  146820 gtagttatcgtcgttgttgattgaattagcaagtgttactaaagttaaagaagtaagaacattattgtt 146752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 15166625 - 15166520
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||||||||||||||||||| |||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15166625 gaattattattatgacagggtgttagatttaattgatgaattagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 15166526  T
Q  101 gtagtt 106  Q
    ||||||    
T  15166525 gtagtt 15166520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 16007935 - 16007830
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||||||||||||||||||| |||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16007935 gaattattattatgacagggtgttagatttaattgatgaattagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 16007836  T
Q  101 gtagtt 106  Q
    ||||||    
T  16007835 gtagtt 16007830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 23666151 - 23666261
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||||||||||||||||||||||| ||| ||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23666151 gaattattattatgacagggtgatatatttaattggtgagttagatatctattattgatgatattattgattatgaaatatatacatatattggataatt 23666250  T
Q  101 gtagttatcgt 111  Q
    |||||| ||||    
T  23666251 gtagttgtcgt 23666261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 10897507 - 10897610
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||||||||||||||| ||| |||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10897507 gaattattattatgacagagtgttagatttaattgatgaattagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 10897606  T
Q  101 gtag 104  Q
    ||||    
T  10897607 gtag 10897610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 14421205 - 14421101
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||||||||||||||||||| |||||| |||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14421205 gaattattattatgacagggtgttagatttaattgatgattt-gatatctattattgatgatattgttgattatgaaatatatacatatactggataatt 14421107  T
Q  101 gtagtt 106  Q
    ||||||    
T  14421106 gtagtt 14421101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 14565561 - 14565456
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||||||||||| ||||||| |||||| |||||||||  ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  14565561 gaattattattatgtcagggtgttagatttaattgatgaattagatatctattattaatgatattgttgattatgaaatgtatacatatattggataatt 14565462  T
Q  101 gtagtt 106  Q
    ||||||    
T  14565461 gtagtt 14565456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 11302706 - 11302596
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||||||||||| ||||||| |||||  || ||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11302706 gaattattattatggcagggtgttagatgtaaatgatgaattggatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 11302607  T
Q  101 gtagttatcgt 111  Q
    |||||| ||||    
T  11302606 gtagttgtcgt 11302596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 18606660 - 18606588
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 171  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18606660 ttgttgttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 18606588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 23666297 - 23666370
Alignment:
Q  98 attgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 171  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23666297 attgttgttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaataacattattgttaa 23666370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 11660639 - 11660569
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11660639 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 11660569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 13255287 - 13255217
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13255287 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 13255217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 14565410 - 14565338
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 171  Q
    |||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14565410 ttgttgttatcgttgttgttggttgaattagtaagtattactaaagttaaagaagtaagaacattattgttaa 14565338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 14421059 - 14420989
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  14421059 ttgttgttgtcgtcgttgttggttgaattagcaagtgttactaaagttaaagaagtaagaacattattgtt 14420989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 16109729 - 16109796
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16109729 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaatattatt 16109796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 29003645 - 29003578
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29003645 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaatattatt 29003578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 34956959 - 34956892
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34956959 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaatattatt 34956892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 48742996 - 48742929
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  48742996 ttgttgttgtcgtcgttgtcggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 48742929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 11302535 - 11302465
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  11302535 ttgttgttgtcgtcgttgttggttgaattagcaagcgttactaaagttaaagaagtaagaacattattgtt 11302465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 10897662 - 10897723
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10897662 tcgtcgttgatggttgaattagcaagtgttactaaagttaaagaagtaagaacattattgtt 10897723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 16572926 - 16572857
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgt 168  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  16572926 ttgttgttgtcgtcgttgttggttgaattagtaagtgttattaaagttgaagaagtaagaacattattgt 16572857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 16592736 - 16592805
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgt 168  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  16592736 ttgttgttgtcgtcgttgttggttgaattagtaagtgttattaaagttgaagaagtaagaacattattgt 16592805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 833753 - 833820
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  833753 ttgttgttgtcgtcgttgttggttgaattaataagtgttactaaagttaaagaagtaagaatattatt 833820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 1198933 - 1199000
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  1198933 ttgttgttgtcgtcgttgttggttgaattaataagtgttactaaagttaaagaagtaagaatattatt 1199000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 18606788 - 18606729
Alignment:
Q  52 ttattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgt 111  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18606788 ttattgatgatgttgttgattatgaaatatatacatatattggataattgtagttgtcgt 18606729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 15166478 - 15166408
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  15166478 ttgttgttgtcgtcgttgttgattgaattagcaagtgttactaaagttaaagaagtaagaatattattgtt 15166408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 13850332 - 13850400
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattg 167  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||    
T  13850332 ttgtggttgtcgtcgttgttggttgaattagtaagtgttattaaagttgaagaagtatgaacattattg 13850400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 159
Target Start/End: Complemental strand, 16007732 - 16007681
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaa 159  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16007732 tcgtcgttgttggttgaattagcaagtgttactaaagttaaagaagtaagaa 16007681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 837791 - 837849
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||    
T  837791 tcgtcgttgttggttgaattaataagtgttaataaagttaaagaagtaagaatattatt 837849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 1202971 - 1203029
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||    
T  1202971 tcgtcgttgttggttgaattaataagtgttaataaagttaaagaagtaagaatattatt 1203029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16109359 - 16109419
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatga 61  Q
    ||||||||||||||| |||||| |||||| ||||||||| ||| |||||||||||||||||    
T  16109359 gaattattattatgaaagggtgttagatttaattgatgaactatatatctattattgatga 16109419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 837234 - 837294
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatga 61  Q
    ||||||||||||||| |||||| |||||| |||||||||  || |||||||||||||||||    
T  837234 gaattattattatgatagggtgttagatttaattgatgaattatatatctattattgatga 837294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1202414 - 1202474
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatga 61  Q
    ||||||||||||||| |||||| |||||| |||||||||  || |||||||||||||||||    
T  1202414 gaattattattatgatagggtgttagatttaattgatgaattatatatctattattgatga 1202474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 35365698 - 35365639
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||| |||||||| |||| ||||||| |||||||| ||| |||||||||    
T  35365698 gtcgttgttggttgatttagtaagagttattaaagttgaagaagtaggaatattattgtt 35365639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 4992911 - 4992853
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgt 168  Q
    ||||||||||||||| |||||||| |||| ||||||| |||||||| ||| ||||||||    
T  4992911 gtcgttgttggttgatttagtaagagttattaaagttgaagaagtatgaatattattgt 4992853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 16005740 - 16005682
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgt 168  Q
    ||||||||||||||| |||||||| |||| ||||||| |||||||| ||| ||||||||    
T  16005740 gtcgttgttggttgatttagtaagagttattaaagttgaagaagtatgaatattattgt 16005682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 14189719 - 14189780
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||||||||||||||| |||||||||||||| |||| || ||| || | |||||||||||||    
T  14189719 tcgtcgttgttggttggattagtaagtgttattaaaattgaaggaggatgaacattattgtt 14189780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 14192474 - 14192535
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||||||||||||||| |||||||||||||| |||| || ||| || | |||||||||||||    
T  14192474 tcgtcgttgttggttggattagtaagtgttattaaaattgaaggaggatgaacattattgtt 14192535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 833238 - 833298
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatga 61  Q
    ||||||||||||||| || ||| |||||| |||||||||  || |||||||||||||||||    
T  833238 gaattattattatgatagagtgttagatttaattgatgaattatatatctattattgatga 833298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1198418 - 1198478
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatga 61  Q
    ||||||||||||||| || ||| |||||| |||||||||  || |||||||||||||||||    
T  1198418 gaattattattatgatagagtgttagatttaattgatgaattatatatctattattgatga 1198478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 99
Target Start/End: Complemental strand, 13678204 - 13678156
Alignment:
Q  52 ttattgatgatattgttgattatg-aaatatatacatatattggataat 99  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||||||    
T  13678204 ttattgatgatgttgttgattatgaaaatttatacatatattggataat 13678156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 8775723 - 8775664
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||| |||||||| |||| ||||||  |||||||| ||| |||||||||    
T  8775723 gtcgttgttggttgatttagtaagagttattaaagtcgaagaagtatgaatattattgtt 8775664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 21744005 - 21744064
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||| |||||||| |||| ||||||  |||||||| ||| |||||||||    
T  21744005 gtcgttgttggttgatttagtaagagttattaaagtcgaagaagtatgaatattattgtt 21744064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 3290072 - 3290110
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatga 39  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  3290072 gaattattattatgatagggtgttagattcaattgatga 3290110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 14946129 - 14946166
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatg 38  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  14946129 gaattattattatgatagggtgttagattcaattgatg 14946166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 15373722 - 15373759
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatg 38  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  15373722 gaattattattatgatagggtgttagattcaattgatg 15373759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 16668811 - 16668856
Alignment:
Q  55 ttgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||||| |||||||||||||||||||||  ||||||||| ||||    
T  16668811 ttgatgatgttgttgattatgaaatatatatgtatattggagaatt 16668856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 45185375 - 45185326
Alignment:
Q  51 attattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||||| |||| |||||||||||||||||||||  ||||||| ||||||    
T  45185375 attattgttgatgttgttgattatgaaatatatatttatattgaataatt 45185326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 155; Significance: 3e-82; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 15533639 - 15533469
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15533639 gaattattattatgacagggtgatatatttaattgatgagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 15533540  T
Q  101 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 171  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15533539 gtagttatcgtcgtcgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 15533469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 36037372 - 36037202
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36037372 gaattattattatgacagggtgatagatttaattgatgagttagatatcttttattgatgatattgttgattatgaaatatatacatatattggataatt 36037273  T
Q  101 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 171  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36037272 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaggtaagaacattattgttaa 36037202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 76 - 171
Target Start/End: Original strand, 49548816 - 49548911
Alignment:
Q  76 aaatatatacatatattggataattgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 171  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  49548816 aaatatatacatatattggataattgtagttatcgtcgttgttggttgaattagtaagtgttactaaaggtaaagaagtaagaacattattgttaa 49548911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 18211947 - 18211877
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18211947 ttgttgttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 18211877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 24048106 - 24048176
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24048106 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 24048176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 15989545 - 15989484
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15989545 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 15989484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 4831994 - 4832061
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4831994 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaatattatt 4832061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 4835289 - 4835356
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4835289 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaatattatt 4835356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 14047541 - 14047474
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  14047541 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaattaagaatattatt 14047474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 30146105 - 30146038
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  30146105 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaaggaagaatattatt 30146038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 30146661 - 30146601
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatga 61  Q
    |||||||||||||||||||||| |||||| |||||||||  ||||||||||||||||||||    
T  30146661 gaattattattatgacagggtgttagatttaattgatgaattagatatctattattgatga 30146601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 52 - 99
Target Start/End: Complemental strand, 18212061 - 18212014
Alignment:
Q  52 ttattgatgatattgttgattatgaaatatatacatatattggataat 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18212061 ttattgatgatgttgttgattatgaaatatatacatatattggataat 18212014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14047914 - 14047854
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatga 61  Q
    ||||||||||||||| |||||| |||||| ||||||||| ||| |||||||||||||||||    
T  14047914 gaattattattatgatagggtgttagatttaattgatgaactatatatctattattgatga 14047854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 169
Target Start/End: Original strand, 33685124 - 33685180
Alignment:
Q  113 gttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||| |||||||||||||| ||||||| |||||||| |||||||||||||    
T  33685124 gttgttggttggattagtaagtgttattaaagttgaagaagtatgaacattattgtt 33685180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 20900137 - 20900192
Alignment:
Q  114 ttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||| ||||||||| ||||||| |||||||| |||||||||||||    
T  20900137 ttgttggttgaattaataagtgttattaaagttgaagaagtatgaacattattgtt 20900192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 27027347 - 27027292
Alignment:
Q  114 ttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||| ||||||||| ||||||| |||||||| |||||||||||||    
T  27027347 ttgttggttgaattaataagtgttattaaagttgaagaagtatgaacattattgtt 27027292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 3336876 - 3336815
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||| ||||||||||||||||||||| ||||||| ||||||   |||||||||||||    
T  3336876 tcgtcgttgctggttgaattagtaagtgttattaaagttgaagaagcgtgaacattattgtt 3336815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 4828705 - 4828766
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaa---agaagtaagaacattatt 166  Q
    |||||||||||||||||||||||||||| | ||||||||||   ||||||||||| ||||||    
T  4828705 tcgtcgttgttggttgaattagtaagtgattctaaagttaaattagaagtaagaatattatt 4828766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 169
Target Start/End: Complemental strand, 17142608 - 17142574
Alignment:
Q  135 gttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||||||||||||||||||||||||||||||||||    
T  17142608 gttactaaagttaaagaagtaagaacattattgtt 17142574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 13877509 - 13877452
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattat 165  Q
    |||||||||||| ||| |||||||||||||| |||| || |||||||| |||||||||    
T  13877509 tcgtcgttgttgattggattagtaagtgttattaaaattgaagaagtatgaacattat 13877452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 13881208 - 13881147
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||| |||||| ||| |||||||||||||| |||| || |||||||| |||||||||||||    
T  13881208 tcgtcattgttgattggattagtaagtgttattaaaattgaagaagtatgaacattattgtt 13881147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 4170425 - 4170366
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||| |||||||| |||| ||||||  |||||||| ||| |||||||||    
T  4170425 gtcgttgttggttgatttagtaagagttattaaagtcgaagaagtatgaatattattgtt 4170366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 14698150 - 14698091
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||| |||||||| |||| ||||||  |||||||| ||| |||||||||    
T  14698150 gtcgttgttggttgatttagtaagagttattaaagtcgaagaagtatgaatattattgtt 14698091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 111 - 166
Target Start/End: Complemental strand, 28916853 - 28916798
Alignment:
Q  111 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    ||||||||| ||| |||||||||||||| |||| || |||||||| ||||||||||    
T  28916853 tcgttgttgattggattagtaagtgttattaaaattgaagaagtatgaacattatt 28916798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 31131995 - 31132054
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||| |||||||| |||| ||||||  |||||||| ||| |||||||||    
T  31131995 gtcgttgttggttgatttagtaagagttattaaagtcgaagaagtatgaatattattgtt 31132054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 41791101 - 41791042
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||| |||||||| |||| |||| || |||||||| ||| |||||||||    
T  41791101 gtcgttgttggttgatttagtaagagttattaaaattgaagaagtatgaatattattgtt 41791042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 43258613 - 43258672
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||| ||||||||| ||||||||||||| ||||||| |||||||| ||| |||| ||||    
T  43258613 gtcgtcgttggttgatttagtaagtgttattaaagttgaagaagtatgaatattaatgtt 43258672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2585459 - 2585497
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatga 39  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  2585459 gaattattattatgatagggtgttagattcaattgatga 2585497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 16221120 - 16221083
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatg 38  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  16221120 gaattattattatgatagggtgttagattcaattgatg 16221083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 41529372 - 41529409
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatg 38  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  41529372 gaattattattatgatagggtgttagattcaattgatg 41529409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 28382331 - 28382271
Alignment:
Q  106 tatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||||| ||||||| ||| |||||||||||||| |||| || |||||||| ||| ||||||    
T  28382331 tatcgttgttgttgattggattagtaagtgttattaaaattgaagaagtatgaatattatt 28382271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 139; Significance: 1e-72; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 4476216 - 4476046
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||||||| ||||||| |||| |||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4476216 gaattattactatgacatggtgttagattaaattgaagagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 4476117  T
Q  101 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 171  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  4476116 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagattaagaagtaagaacattattgttaa 4476046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 12941653 - 12941471
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatat--------- 91  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||             
T  12941653 gaattattattatgacagggtgatagatttaattgatgagttagatatttattattgatgatattgttgattatgaaatatatatatatatatatatata 12941554  T
Q  92 ---tggataattgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 171  Q
       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12941553 tattggataattgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 12941471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 28290530 - 28290640
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||||||||||| ||| ||| |||||  |||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28290530 gaattattattatggcagagtgttagatgtaattgatgaattggatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 28290629  T
Q  101 gtagttatcgt 111  Q
    |||||| ||||    
T  28290630 gtagttgtcgt 28290640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 24266504 - 24266445
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24266504 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 24266445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 221462 - 221392
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  221462 ttgttgttgtcgttgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 221392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 23351816 - 23351758
Alignment:
Q  111 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23351816 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 23351758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 29848909 - 29848976
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29848909 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaaaaacattatt 29848976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 13763687 - 13763617
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  13763687 ttgttgttgtcgtcgttgttggttaaattagtaagtgttgctaaagttaaagaagtaagaacattattgtt 13763617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 28290701 - 28290771
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  28290701 ttgttgttgtcgtcgttgttggttgaattagcaagcgttactaaagttaaagaagtaagaacattattgtt 28290771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 16133862 - 16133929
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  16133862 ttgttgttgtcgtcgttgttggttgaattaataagtgttactaaagttaaagaagtaggaacattatt 16133929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 29417306 - 29417373
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  29417306 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaaattaaagaagtaagaatattatt 29417373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 19444538 - 19444605
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  19444538 ttgttgttgtcgttgttgttggttgaattagtaagtgttactaaagttaaagaagtaggaagattatt 19444605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 23621625 - 23621683
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||||||||||| ||| |||||||||||||| |||| || |||||||| ||||||||||    
T  23621625 tcgtcgttgttgattggattagtaagtgttattaaaattgaagaagtatgaacattatt 23621683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 25395922 - 25395873
Alignment:
Q  50 tattattgatgatattgttgattatgaaatatatacatatattggataat 99  Q
    ||||||||||||| ||||||||||||| |||||||  |||||||||||||    
T  25395922 tattattgatgatgttgttgattatgagatatatatgtatattggataat 25395873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 2288561 - 2288620
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||| ||||||||| |||||||||||| |||||| | |||||||| ||| |||||||||    
T  2288561 gtcgtcgttggttgatttagtaagtgtttctaaagatgaagaagtatgaatattattgtt 2288620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 8717439 - 8717496
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||| |||||||||||||||||||||||||| |||| || |||||||| ||| ||||||    
T  8717439 tcgttgttgttggttgaattagtaagtgttattaaa-ttgaagaagtatgaatattatt 8717496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 14582144 - 14582181
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatg 38  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  14582144 gaattattattatgatagggtgatagatttaattgatg 14582181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 14616558 - 14616595
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatg 38  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  14616558 gaattattattatgatagggtgttagattcaattgatg 14616595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 22346478 - 22346441
Alignment:
Q  56 tgatgatattgttgattatgaaatatatacatatattg 93  Q
    |||||||||||||||||||||||||||||  |||||||    
T  22346478 tgatgatattgttgattatgaaatatatatgtatattg 22346441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 15538697 - 15538629
Alignment:
Q  101 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||||| | ||||| ||||||||| ||||||||||||  ||||| | |||||||| ||| |||||||||    
T  15538697 gtagttgttgtcgtcgttggttgatttagtaagtgtttttaaagatgaagaagtatgaatattattgtt 15538629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 25749625 - 25749581
Alignment:
Q  56 tgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||||| |||||||||||||||||||||  ||||||| ||||||    
T  25749625 tgatgatgttgttgattatgaaatatatatgtatattgaataatt 25749581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 135; Significance: 3e-70; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 3175 - 3345
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||||||  |||||||||||  ||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3175 gaattattacgatgacagggtgtaagattaaattgaagagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 3274  T
Q  101 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 171  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  3275 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagattaagaagtaagaacattattgttaa 3345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 110044 - 109934
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  110044 gaattattattatgacagggtgttagatttaattgatgagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 109945  T
Q  101 gtagttatcgt 111  Q
    |||||| ||||    
T  109944 gtagttgtcgt 109934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 109873 - 109803
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  109873 ttgttgttgtcgtcgttgttggttgaattagcaagtgttactaaagttaaagaagtaagaacattattgtt 109803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 76 - 171
Target Start/End: Complemental strand, 524 - 429
Alignment:
Q  76 aaatatatacatatattggataattgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 171  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  524 aaatatatacatatattggataattgtagttttcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 37143 - 37248
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||||||||||||| |||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37143 gaattattattatgatagggtgttagatttaattgatgagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 37242  T
Q  101 gtagtt 106  Q
    ||||||    
T  37243 gtagtt 37248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 37383 - 37453
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  37383 ttgttgttgtcgtcgttgttggttgaattaacaagtgttactaaagttaaagaagtaagaacattattgtt 37453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 2e-43; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 8729338 - 8729443
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||||||||||||||||||| |||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8729338 gaattattattatgacagggtgttagatttaattgatgaattagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 8729437  T
Q  101 gtagtt 106  Q
    ||||||    
T  8729438 gtagtt 8729443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 27942499 - 27942609
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||||||| |||||||||||| |||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27942499 gaattattaatatgacagggtgttagatttaattgatgaattagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 27942598  T
Q  101 gtagttatcgt 111  Q
    |||||| ||||    
T  27942599 gtagttgtcgt 27942609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 44476118 - 44476013
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||||||||||||||||||| |||||| |||||||||  | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  44476118 gaattattattatgacagggtgttagatttaattgatgaattggatatctattattgatgatattgttgatcatgaaatatatacatatattggataatt 44476019  T
Q  101 gtagtt 106  Q
    ||||||    
T  44476018 gtagtt 44476013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 44479380 - 44479275
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||||||||||||||||||| |||||| |||||||||  | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  44479380 gaattattattatgacagggtgttagatttaattgatgaattggatatctattattgatgatattgttgatcatgaaatatatacatatattggataatt 44479281  T
Q  101 gtagtt 106  Q
    ||||||    
T  44479280 gtagtt 44479275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 20453969 - 20453899
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20453969 ttgttgttttcgtcgttgttggttgaattagtaagtgctactaaagttaaagaagtaagaacattattgtt 20453899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 21862045 - 21862115
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  21862045 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagggaaagaagtaagaacattattgtt 21862115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 44475959 - 44475901
Alignment:
Q  111 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  44475959 tcgttgttggttgaattagcaagtgttactaaagttaaagaagtaagaacattattgtt 44475901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 44479221 - 44479163
Alignment:
Q  111 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  44479221 tcgttgttggttgaattagcaagtgttactaaagttaaagaagtaagaacattattgtt 44479163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 8729469 - 8729530
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  8729469 tcgtcgttgttgattgaattagcaagtgttactaaagttaaagaagtaagaatattattgtt 8729530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 20459579 - 20459521
Alignment:
Q  111 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20459579 tcgttgtttcttgaattagtaagtgttactaaagttaaagaagtaacaacattattgtt 20459521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 43111755 - 43111685
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| ||||||||||||||||||||||||||||||| | ||||| |||||||| |||||||||||||    
T  43111755 ttgttgttgtcgtcgttgttggttgaattagtaagtgttatttaagttgaagaagtatgaacattattgtt 43111685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 44431372 - 44431311
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||| ||||    
T  44431372 tcgtcgttgttggttgaattagtaagtgttactaaagttgaagaagtatgaatattaatgtt 44431311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 32949452 - 32949394
Alignment:
Q  111 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||||||||||||||||||||||||||| ||||||| |||||||  |||||||||||||    
T  32949452 tcgttgttggttgaattagtaagtgttattaaagttgaagaagtgtgaacattattgtt 32949394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 19881618 - 19881557
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||  ||| |||||||||    
T  19881618 tcgtcgttgttggttgaattagtaagtgttattaaagttgaagaagtgtgaatattattgtt 19881557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 38186330 - 38186390
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaa 159  Q
    |||| ||| ||||| |||||||||||||||||||||||||| |||||||| ||||||||||    
T  38186330 ttgttgttgtcgtcattgttggttgaattagtaagtgttaccaaagttaatgaagtaagaa 38186390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 28853376 - 28853317
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||| |||||||| |||||||||||| |||||||| ||| |||||||||    
T  28853376 gtcgttgttggttgatttagtaagagttactaaagttgaagaagtatgaatattattgtt 28853317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 365349 - 365406
Alignment:
Q  112 cgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||||||||||| ||||||||||| || ||||||| ||||| || |||||||||||||    
T  365349 cgttgttggttggattagtaagtgctattaaagtttaagaaatatgaacattattgtt 365406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 6608941 - 6609000
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||| |||||||| |||| ||||||  |||||||| ||| |||||||||    
T  6608941 gtcgttgttggttgatttagtaagagttattaaagtcgaagaagtatgaatattattgtt 6609000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 7301840 - 7301899
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||| |||||||| |||| ||||||| |||||||| ||| ||| |||||    
T  7301840 gtcgttgttggttgatttagtaagagttattaaagttgaagaagtatgaatatttttgtt 7301899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 167
Target Start/End: Original strand, 15005088 - 15005147
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattg 167  Q
    |||| ||||||| ||| |||||||||||||| |||| || |||||||| |||||||||||    
T  15005088 tcgttgttgttgattggattagtaagtgttattaaaattgaagaagtatgaacattattg 15005147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 45135627 - 45135686
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||| |||||||| |||| ||||||  |||||||| ||| |||||||||    
T  45135627 gtcgttgttggttgatttagtaagagttattaaagtcgaagaagtatgaatattattgtt 45135686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 19988483 - 19988521
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatga 39  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  19988483 gaattattattatgatagggtgttagattcaattgatga 19988521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 24708418 - 24708476
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||||||||||| ||| |||||||||||||| |||| || |||||||| ||| ||||||    
T  24708418 tcgtcgttgttgattggattagtaagtgttattaaaattgaagaagtatgaatattatt 24708476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 21322548 - 21322585
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatg 38  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  21322548 gaattattattatgatagggtgttagattcaattgatg 21322585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 21327136 - 21327173
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatg 38  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  21327136 gaattattattatgatagggtgttagattcaattgatg 21327173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 2e-43; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 16371388 - 16371283
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||||||||||||||||||| |||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16371388 gaattattattatgacagggtgttagatttaattgatgaattagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 16371289  T
Q  101 gtagtt 106  Q
    ||||||    
T  16371288 gtagtt 16371283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 20438857 - 20438962
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||||||||||||||| ||| |||||| |||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20438857 gaattattattatgacagagtgttagatttaattgatgaattggatatctattattgatgatattgttgattatgaaatatatacatatattggataatt 20438956  T
Q  101 gtagtt 106  Q
    ||||||    
T  20438957 gtagtt 20438962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 19209323 - 19209253
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19209323 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 19209253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 28311920 - 28311850
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28311920 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 28311850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 13529104 - 13529171
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13529104 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaggaacattatt 13529171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 16371186 - 16371127
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16371186 gtcgttgttggttgaattagcaagtgttactaaagttaaagaagtaagaacattattgtt 16371127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 20439012 - 20439073
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  20439012 tcgtcgttgttggttgaattagcaagtgttactaaagttaaagaagttagaacattattgtt 20439073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 29534246 - 29534179
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  29534246 ttgttgttgtcgtcgttgttggtttaattagtaagtgttactaaagttaaagaagtaagaatattatt 29534179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 32649596 - 32649529
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||| ||| |||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||    
T  32649596 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaaattaaagaattaagaatattatt 32649529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 16400463 - 16400393
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| |||||||||||||||||||||||||||| || ||||||| ||||||| ||||||||||||||    
T  16400463 ttgttgttgtcgtcgttgttggttgaattagtaagtgctattaaagttgaagaagtgagaacattattgtt 16400393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29534823 - 29534763
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatga 61  Q
    |||||||||||||||||||||| |||||| |||||||||  ||||||||||||||||||||    
T  29534823 gaattattattatgacagggtgttagatttaattgatgaattagatatctattattgatga 29534763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32649986 - 32649926
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatgagctagatatctattattgatga 61  Q
    |||||||||||||||||||||| |||||| |||||||||  ||||||||||||||||||||    
T  32649986 gaattattattatgacagggtgttagatttaattgatgaattagatatctattattgatga 32649926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 28204955 - 28205016
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||||||||||||||| |||||||||||||| |||| || |||||||| |||||||||||||    
T  28204955 tcgtcgttgttggttggattagtaagtgttattaaatttgaagaagtatgaacattattgtt 28205016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 18251911 - 18251856
Alignment:
Q  114 ttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||| ||||||||| ||||||| |||||||| |||||||||||||    
T  18251911 ttgttggttgaattaataagtgttattaaagttgaagaagtatgaacattattgtt 18251856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 18269914 - 18269859
Alignment:
Q  114 ttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||| ||||||||| ||||||| |||||||| |||||||||||||    
T  18269914 ttgttggttgaattaataagtgttattaaagttgaagaagtatgaacattattgtt 18269859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 18274592 - 18274537
Alignment:
Q  114 ttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||| ||||||||| ||||||| |||||||| |||||||||||||    
T  18274592 ttgttggttgaattaataagtgttattaaagttgaagaagtatgaacattattgtt 18274537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 20578890 - 20578831
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||| |||||||| |||| ||||||| |||||||| ||| |||||||||    
T  20578890 gtcgttgttggttgatttagtaagagttattaaagttgaagaagtatgaatattattgtt 20578831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 20586583 - 20586524
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||| |||||||| |||| ||||||| |||||||| ||| |||||||||    
T  20586583 gtcgttgttggttgatttagtaagagttattaaagttgaagaagtatgaatattattgtt 20586524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 20900735 - 20900680
Alignment:
Q  114 ttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||| ||||||||| ||||||| |||| ||| |||||||||||||    
T  20900735 ttgttggttgaattaataagtgttattaaagttgaagaggtatgaacattattgtt 20900680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 21181812 - 21181870
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    ||||| |||||||||||| |||||||||||| ||||||| |||||||  ||||||||||    
T  21181812 tcgtcattgttggttgaaatagtaagtgttattaaagttgaagaagtttgaacattatt 21181870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 16397625 - 16397674
Alignment:
Q  120 gttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||||||||||||||| || ||||||| |||||||| |||||||||||||    
T  16397625 gttgaattagtaagtgctattaaagttgaagaagtatgaacattattgtt 16397674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 293590 - 293531
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||| ||||||||| ||||||||||||| ||||||| |||||||| ||| |||| ||||    
T  293590 gtcgtcgttggttgatttagtaagtgttattaaagttgaagaagtatgaatattaatgtt 293531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 45306720 - 45306662
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgt 168  Q
    ||||||||||||||| |||||||| |||| ||||||| ||||||||  || ||||||||    
T  45306720 gtcgttgttggttgatttagtaagagttattaaagttgaagaagtataaatattattgt 45306662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 20824639 - 20824676
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatg 38  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  20824639 gaattattattatgatagggtgttagattcaattgatg 20824676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 16883834 - 16883870
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgat 37  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  16883834 gaattattattatgatagggtgttagattcaattgat 16883870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 10581 - 10651
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10581 ttgttgttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 10651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 10512 - 10560
Alignment:
Q  52 ttattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10512 ttattgatgatgttgttgattatgaaatatatacatatattggataatt 10560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 21038 - 20968
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21038 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 20968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 2476 - 2406
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2476 ttgttgttgtcgtcgttgttggttgaattagtaagtgtttctaaagttaaagaagtaagaacattattgtt 2406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 4428 - 4489
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4428 tcgttgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 4489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 223874 - 223934
Alignment:
Q  109 cgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  223874 cgtcgttgttggttgaattagtaagagttactaaagttaaagaagtaagaacattattgtt 223934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 41535 - 41593
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41535 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaggaacattatt 41593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 145838 - 145780
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  145838 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaatattatt 145780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 111 - 166
Target Start/End: Original strand, 887 - 942
Alignment:
Q  111 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  887 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaaaattatt 942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 169
Target Start/End: Complemental strand, 1612 - 1558
Alignment:
Q  115 tgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  1612 tgttggttgaattagcaagtgttactaaagttaaagaagtaagaacattattgtt 1558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 1817 - 1758
Alignment:
Q  52 ttattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgt 111  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  1817 ttattgatgatgttgttgattatgaaatatatacatatattggataattgttgttgtcgt 1758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 13731 - 13666
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacatta 164  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  13731 ttgtggttttcgtcgttgttggttgaattagtaagtgttactaaagttgaagaagtatgaacatta 13666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 11726 - 11661
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacatta 164  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  11726 ttgtggttttcgtcgttgttggttgaattagtaagtgttactaaagttgaagaagtatgaacatta 11661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 50515 - 50454
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||    
T  50515 tcgtcgttgttggttgaattagtaagtgttactaaagttgaagaagtgtgaacattattgtt 50454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 2138 - 2208
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||||| ||||| || |||||||||||||    
T  2138 ttgttgttgtcgtcgttgttggttgaattagtaagtgttattaaagttgaagaattatgaacattattgtt 2208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 137349 - 137279
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||| ||||    
T  137349 ttgtggttgtcgtcgttgttggttgaattagtaagtgttactaaagttgaagaagtatgaatattaatgtt 137279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 35262 - 35323
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||||||||||||||| |||||||||||||| ||||||| |||||||| |||||||||||||    
T  35262 tcgtcgttgttggttggattagtaagtgttattaaagttgaagaagtatgaacattattgtt 35323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 3800 - 3752
Alignment:
Q  118 tggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3800 tggttgaattagtaagtgttactaaagttaaagaagtaggaacattatt 3752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 6563 - 6498
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacatta 164  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||  ||||||| ||| ||||    
T  6563 ttgtggttgtcgtcgttgttggttgaattagtaagtgttactaaagttgtagaagtatgaatatta 6498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 99
Target Start/End: Original strand, 16301 - 16348
Alignment:
Q  52 ttattgatgatattgttgattatgaaatatatacatatattggataat 99  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||    
T  16301 ttattgatgaagttgttgattatgaaatatatacatatattggataat 16348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 154
Target Start/End: Complemental strand, 59058 - 59012
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagt 154  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  59058 tcgtcgttgttggttgaattagtaagtgttattaaagttgaagaagt 59012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 10363 - 10316
Alignment:
Q  99 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagtt 146  Q
    |||| ||| ||||||||||||||||||||||||||| |||||||||||    
T  10363 ttgtggttgtcgtcgttgttggttgaattagtaagtattactaaagtt 10316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 1811 - 1753
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||||||||||||||| ||||||||||| || ||||||| ||||| || ||||||||||    
T  1811 tcgtcgttgttggttggattagtaagtgctattaaagtttaagaaatatgaacattatt 1753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 12075 - 12136
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||||||||||| ||| |||||||||||||| |||| || |||||||| ||||| |||||||    
T  12075 tcgtcgttgttgattggattagtaagtgttattaaaattgaagaagtatgaacagtattgtt 12136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 14334 - 14395
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||||||||||| ||| |||||||||||||| |||| || |||||||| ||||| |||||||    
T  14334 tcgtcgttgttgattggattagtaagtgttattaaaattgaagaagtatgaacagtattgtt 14395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 22511 - 22572
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||||||||||||||| |||||||| || || ||||||| ||||| || |||||||||||||    
T  22511 tcgtcgttgttggttggattagtaaatgctattaaagtttaagaaatatgaacattattgtt 22572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 5849 - 5800
Alignment:
Q  50 tattattgatgatattgttgattatgaaatatatacatatattggataat 99  Q
    |||| |||||||| |||||||||||||||||||||  |||||||||||||    
T  5849 tattgttgatgatgttgttgattatgaaatatatatgtatattggataat 5800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 51053 - 51004
Alignment:
Q  50 tattattgatgatattgttgattatgaaatatatacatatattggataat 99  Q
    ||||||||||||| ||||||||||||| |||||||  |||||||||||||    
T  51053 tattattgatgatgttgttgattatgagatatatatgtatattggataat 51004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 47987 - 47934
Alignment:
Q  113 gttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 166  Q
    |||||||||| |||||||||||| |  |||||||||||||||||||| ||||||    
T  47987 gttgttggttaaattagtaagtgattttaaagttaaagaagtaagaatattatt 47934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 40663 - 40724
Alignment:
Q  108 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||||||||||||||  ||||||||||| || ||||||| ||||| || |||||||||||||    
T  40663 tcgtcgttgttggttagattagtaagtgctattaaagttgaagaaatatgaacattattgtt 40724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 99
Target Start/End: Complemental strand, 97 - 49
Alignment:
Q  52 ttattgatgatattgttgattatg-aaatatatacatatattggataat 99  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||||||    
T  97 ttattgatgatgttgttgattatgaaaatttatacatatattggataat 49  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 11546 - 11601
Alignment:
Q  114 ttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||| |||||||| |||| ||||||| |||||||| ||| |||||||||    
T  11546 ttgttggttgatttagtaagagttattaaagttgaagaagtatgaatattattgtt 11601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 32590 - 32531
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||| |||||||| |||| ||||||  |||||||| ||| |||||||||    
T  32590 gtcgttgttggttgatttagtaagagttattaaagtcgaagaagtatgaatattattgtt 32531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 2583 - 2524
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||| ||||||||| ||||||||||||| ||||||| |||||||| ||| |||| ||||    
T  2583 gtcgtcgttggttgatttagtaagtgttattaaagttgaagaagtatgaatattaatgtt 2524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 82222 - 82281
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||||||||||||| |||||||| |||| ||||||  |||||||| ||| |||||||||    
T  82222 gtcgttgttggttgatttagtaagagttattaaagtcgaagaagtatgaatattattgtt 82281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 6376 - 6435
Alignment:
Q  110 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    ||||| ||||||||| ||||||||||||| ||||||| |||||||| ||| || ||||||    
T  6376 gtcgtcgttggttgatttagtaagtgttattaaagttgaagaagtatgaatatcattgtt 6435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 9220 - 9162
Alignment:
Q  111 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 169  Q
    |||||||| |||| |||||||||||||| |||| || ||| |||| |||||||||||||    
T  9220 tcgttgttagttggattagtaagtgttattaaaattgaaggagtatgaacattattgtt 9162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8322 - 8360
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatga 39  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  8322 gaattattattatgatagggtgttagattcaattgatga 8360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 19677 - 19623
Alignment:
Q  2 aattattattatgacagggtgatagattcaattgatgagctagatatctattatt 56  Q
    |||||||||||||| |||||| ||||||||||||||||  |  ||||||||||||    
T  19677 aattattattatgatagggtgttagattcaattgatgaattttatatctattatt 19623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 47051 - 47089
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatga 39  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  47051 gaattattattatgatagggtgttagattcaattgatga 47089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 51324 - 51362
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatga 39  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  51324 gaattattattatgatagggtgttagattcaattgatga 51362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 93
Target Start/End: Complemental strand, 44500 - 44458
Alignment:
Q  51 attattgatgatattgttgattatgaaatatatacatatattg 93  Q
    ||||||| ||||||||||||||||||||||||||  |||||||    
T  44500 attattgttgatattgttgattatgaaatatatatgtatattg 44458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 95732 - 95694
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatga 39  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  95732 gaattattattatgatagggtgttagattcaattgatga 95694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1290 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1290
Description:

Target: scaffold1290; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 1527 - 1576
Alignment:
Q  51 attattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||||| |||| |||||||||||||||||||||  ||||||| ||||||    
T  1527 attattgttgatgttgttgattatgaaatatatatttatattgaataatt 1576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 38232 - 38195
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatg 38  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  38232 gaattattattatgatagggtgttagattcaattgatg 38195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 55799 - 55762
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatg 38  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  55799 gaattattattatgatagggtgttagattcaattgatg 55762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 177797 - 177752
Alignment:
Q  55 ttgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||||| |||||||||||||||||||||  ||||||||| ||||    
T  177797 ttgatgatgttgttgattatgaaatatatatgtatattggagaatt 177752  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 258382 - 258345
Alignment:
Q  1 gaattattattatgacagggtgatagattcaattgatg 38  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  258382 gaattattattatgatagggtgttagattcaattgatg 258345  T

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Target: scaffold0326 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 5673 - 5721
Alignment:
Q  52 ttattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    |||||| |||| ||||| |||||||||||||||  ||||||||||||||    
T  5673 ttattgttgatgttgttaattatgaaatatatatgtatattggataatt 5721  T

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Target: scaffold0244 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 100
Target Start/End: Complemental strand, 9442 - 9394
Alignment:
Q  52 ttattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||||||||| ||||| |||||||||||||||  ||||||| ||||||    
T  9442 ttattgatgatgttgttaattatgaaatatatatgtatattgaataatt 9394  T

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Target: scaffold0244; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 100
Target Start/End: Complemental strand, 13515 - 13467
Alignment:
Q  52 ttattgatgatattgttgattatgaaatatatacatatattggataatt 100  Q
    ||||||||||| ||||| |||||||||||||||  ||||||| ||||||    
T  13515 ttattgatgatgttgttaattatgaaatatatatgtatattgaataatt 13467  T

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