View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21679_high_1 (Length: 1021)

Name: NF21679_high_1
Description: NF21679
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21679_high_1
NF21679_high_1
[»] chr4 (10 HSPs)
chr4 (1-686)||(26646920-26647615)
chr4 (7-289)||(13682538-13682805)
chr4 (35-289)||(13669681-13669920)
chr4 (7-167)||(13689216-13689373)
chr4 (7-112)||(22188262-22188367)
chr4 (973-1021)||(26647619-26647667)
chr4 (318-364)||(13669607-13669653)
chr4 (318-364)||(13682464-13682510)
chr4 (89-167)||(13687264-13687342)
chr4 (219-263)||(13687186-13687230)
[»] chr8 (8 HSPs)
chr8 (35-489)||(37001797-37002241)
chr8 (35-461)||(36992080-36992500)
chr8 (696-949)||(36992609-36992855)
chr8 (697-942)||(37002526-37002771)
chr8 (488-621)||(37002274-37002409)
chr8 (959-1021)||(36993021-36993083)
chr8 (634-685)||(37002459-37002510)
chr8 (591-622)||(36992498-36992529)
[»] chr7 (2 HSPs)
chr7 (318-391)||(8596984-8597057)
chr7 (238-292)||(8596901-8596959)
[»] chr3 (2 HSPs)
chr3 (491-596)||(27442791-27442895)
chr3 (491-596)||(27445947-27446051)
[»] chr1 (1 HSPs)
chr1 (491-588)||(12796262-12796358)


Alignment Details
Target: chr4 (Bit Score: 427; Significance: 0; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 427; E-Value: 0
Query Start/End: Original strand, 1 - 686
Target Start/End: Original strand, 26646920 - 26647615
Alignment:
Q  1 tcaagcaccaactcaaaccaatgttcctgaaatatgacaaacttatccgtagtattgttagcctttattgattcataaccatcgtataatatctccatta 100  Q
    |||| |||||||||||| |||| || || || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  26646920 tcaaccaccaactcaaaacaatctttctcaattatgacaaacttatccgtagtattgttagcctttattgattcataaccatcgcataatatctccatta 26647019  T
Q  101 gcaaaggagatgtcacaacaccatctnnnnnnnnttgatgcaccaaggcttccttaattacatcttccttttcccaaatcattctgttcattgaacttgt 200  Q
    ||||||||||||||||||||||||||        || |||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||| |    
T  26647020 gcaaaggagatgtcacaacaccatctataaaaaattcatgcaccaaggcttccttaattacatcttccttttcccgaatcattatgttcgttgaactttt 26647119  T
Q  201 gccactttctttcatttctttcatgaaagtacaaaatctgcaaatattgaaaaatcatgttagttaattagcaaacaaaaaacttgagggagcgtgacgc 300  Q
    |||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  26647120 gccactttctttcat---------gaaagtacaaaatctgcaaatattgaaaaatcatgttagttaattagcagacaaaaaacttgagggagtgtgacgc 26647210  T
Q  301 ccgnnnnnnnnnnnnnn-gaataacaaaatatgggtttcaaaatttcatttctcataaattaagaatatcacatttaaattcacaacatttgtacaacat 399  Q
    |||               ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26647211 ccgttttttttttttgttgaataacaaaacatgggtttcaaaatttcatttctcataaattaagaatatcacatttaaattcacaacatttgtacaacat 26647310  T
Q  400 agacttctacaaaagcatcaaatacaaacttagactcctacaacgtttgtacaacatctgtactgttgaaactgatttacttagctatatt--------- 490  Q
    ||||| |||||||||||| |||||||||||||||||||| ||||||| ||||||||| ||||||||||||| |||||||||||||||||||             
T  26647311 agactcctacaaaagcataaaatacaaacttagactcctgcaacgttggtacaacatttgtactgttgaaa-tgatttacttagctatattgttcctatc 26647409  T
Q  491 ------------attcctatttctaaggaagtgccagtggaattgacttagtccttccacaattcacgttttagtcaatggagtcattttatttagtggt 578  Q
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26647410 ctgtaattaattattcctatttctaaggaagtgccagtggaattgacttagtccttccacaattcacgttttagtcaatggagtcattttatttagtggt 26647509  T
Q  579 tttcatctctccgtaaggatattaaagacacctcttgtgcactcaaacaatatactgataaattcccttatgttttactcttccatgtacatcatggtat 678  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26647510 tttcatctctccgtaaagatattaaagacaactcttgtgcactcaaaca--atactgataaattcccttatgttttactcttccatgtacatcatggtat 26647607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 7 - 289
Target Start/End: Complemental strand, 13682805 - 13682538
Alignment:
Q  7 accaactcaaaccaatgttcctgaaatatgacaaacttatccgtagtattgttagcctttattgattcataaccatcgtataatatctccattagcaaag 106  Q
    ||||||||||||| || |||||  | | ||||||||||| |||||| ||||||||| | |||||||| | |||||| ||||||||| |||||||||||||    
T  13682805 accaactcaaacctattttccttgattctgacaaacttagccgtagcattgttagcatctattgatttacaaccattgtataatatgtccattagcaaag 13682706  T
Q  107 gagatgtcacaacaccatctnnnnnnnnttgatgcaccaaggcttccttaattacatcttccttttcccaaatcattctgttcattgaacttgtgccact 206  Q
    ||||||||||||||||| |          || | ||||||||||||||||||||||||||| | |||||||| |||| || || ||    |||   |||     
T  13682705 gagatgtcacaacaccaaccacaaaaaagtgctccaccaaggcttccttaattacatcttcttcttcccaaaacatt-tggtcctt----ttg-atcac- 13682613  T
Q  207 ttctttcatttctttcatgaaagtacaaaatctgcaaatattgaaaaatcatgttagttaattagcaaacaaaaaacttgagg 289  Q
            ||| ||||||||||| ||| || ||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  13682612 --------tttttttcatgaaagcacagaagctgcaaatattgaaaaatcatattagttaattagcaaacaaaaaatttgagg 13682538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 35 - 289
Target Start/End: Complemental strand, 13669920 - 13669681
Alignment:
Q  35 tgacaaacttatccgtagtattgttagcctttattgattcataaccatcgtataatatctccattagcaaaggagatgtcacaacaccatctnnnnnnnn 134  Q
    ||||||||||| |||||| ||||||||| | |||||||| | |||||| ||||||||| |||||||||||||||||||||||||||||| |             
T  13669920 tgacaaacttagccgtagcattgttagcatctattgatttacaaccattgtataatatgtccattagcaaaggagatgtcacaacaccaaccacaaaaaa 13669821  T
Q  135 ttgatgcaccaaggcttccttaattacatcttccttttcccaaatcattctgttcattgaacttgtgccactttctttcatttctttcatgaaagtacaa 234  Q
     || | ||||||||||||||||||||||||||| | |||||||| |||| || || ||    |||   |||         ||| ||||||||||| |||     
T  13669820 gtgctccaccaaggcttccttaattacatcttcttcttcccaaaacatt-tggtcctt----ttg-atcac---------tttttttcatgaaagcacag 13669736  T
Q  235 aatctgcaaatattgaaaaatcatgttagttaattagcaaacaaaaaacttgagg 289  Q
    || ||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  13669735 aagctgcaaatattgaaaaatcatattagttaattagcaaacaaaaaatttgagg 13669681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 7 - 167
Target Start/End: Complemental strand, 13689373 - 13689216
Alignment:
Q  7 accaactcaaaccaatgttcctgaaatatgacaaacttatccgtagtattgttagcctttattgattcataaccatcgtataatatctccattagcaaag 106  Q
    ||||||||||||| || |||||  | | ||||||||||| |||||| ||||||||| | |||||||| | |||||| |||||   | |||||||||||||    
T  13689373 accaactcaaacctattttccttgattctgacaaacttagccgtagcattgttagcatctattgatttacaaccattgtata---tgtccattagcaaag 13689277  T
Q  107 gagatgtcacaacaccatctnnnnnnnnttgatgcaccaaggcttccttaattacatcttc 167  Q
    ||||||||||||||||||||         || | |||||||||||||||||||||||||||    
T  13689276 gagatgtcacaacaccatctagaaaaaagtgctccaccaaggcttccttaattacatcttc 13689216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 22188262 - 22188367
Alignment:
Q  7 accaactcaaaccaatgttcctgaaatatgacaaacttatccgtagtattgttagcctttattgattcataaccatcgtataatatctccattagcaaag 106  Q
    |||||| |||||| || ||||| || | | |||| ||||  ||||||||||||||| |||||||||| |||||||| ||||||||| ||||||| |||||    
T  22188262 accaacccaaacctattttcctcaattctaacaaccttagacgtagtattgttagcatttattgattgataaccattgtataatatgtccattatcaaag 22188361  T
Q  107 gagatg 112  Q
    ||||||    
T  22188362 gagatg 22188367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 973 - 1021
Target Start/End: Original strand, 26647619 - 26647667
Alignment:
Q  973 gcatactggttttggagatggaagtgggactggaatagcgagaaccatt 1021  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26647619 gcatactggttttggagatggaagtgggactggaatagtgagaaccatt 26647667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 13669653 - 13669607
Alignment:
Q  318 gaataacaaaatatgggtttcaaaatttcatttctcataaattaaga 364  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  13669653 gaataacagaacatgggtttcaaaatttcatttctcataaattaaga 13669607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 13682510 - 13682464
Alignment:
Q  318 gaataacaaaatatgggtttcaaaatttcatttctcataaattaaga 364  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  13682510 gaataacagaacatgggtttcaaaatttcatttctcataaattaaga 13682464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 13687342 - 13687264
Alignment:
Q  89 atatctccattagcaaaggagatgtcacaacaccatctnnnnnnnnttgatgcaccaaggcttccttaattacatcttc 167  Q
    |||| |||||||||||||||||||||||||||||||||         || | |||||||||||||||||||||||||||    
T  13687342 atatgtccattagcaaaggagatgtcacaacaccatctagaaaaaagtgctccaccaaggcttccttaattacatcttc 13687264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 13687230 - 13687186
Alignment:
Q  219 tttcatgaaagtacaaaatctgcaaatattgaaaaatcatgttag 263  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  13687230 tttcatgaaagcacagaatctgcaaatattgaaaaatcatattag 13687186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 35 - 489
Target Start/End: Original strand, 37001797 - 37002241
Alignment:
Q  35 tgacaaacttatccgtagtattgttagcctttattgattcataaccatcgtataatatctccattagcaaaggagatgtcacaacaccatctnnnnnnnn 134  Q
    ||||||||||| |||||||||||| ||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||            
T  37001797 tgacaaacttagccgtagtattgtcagcatttattgattgataaccattgtataatatctccattagcaaaggagatgtcacagcaccatctacaaagaa 37001896  T
Q  135 ttgatgcaccaaggcttccttaattacatcttccttttcccaaatcattctgttcattgaacttgtgccactttctttcatttctttcatgaaagtacaa 234  Q
     || | ||||||||||||| ||||||||||||  |||||||||| ||||  || | ||||| ||  |||||||||||      ||   |||||||||||     
T  37001897 gtgcttcaccaaggcttccataattacatcttgtttttcccaaaacatttggtcctttgaaatttggccactttctt------ct---atgaaagtacag 37001987  T
Q  235 aatctgcaaatattgaaaaatcatgttagttaattagcaaacaaaaaacttgagggagcgtgacgcccgnnnnnnnnnnnnnngaataacaaaatatggg 334  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||| |||              ||||||||||| |||||    
T  37001988 aatctgcaaatattgaaaaatcatattagttaattagcaaacaaaaaatttgagggagtgtgacgaccgttttttttttgtt-gaataacaaaacatggg 37002086  T
Q  335 tttcaaaatttcatttctcataaattaagaatatcacatttaaattcacaacatttgtacaacatagacttctacaaaagcatcaaatacaaacttagac 434  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  37002087 tttcaaaatttcatttctcataaattaagagtataacatttaaattcacaacatttatacaacatagactcctacaaaagcatcaaatacaaacttagac 37002186  T
Q  435 tcctacaacgtttgtacaacatctgtactgttgaaactgatttacttagctatat 489  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  37002187 tcctgcaacgtttgtacaacatttgtactgttgaaactgatttacttagctatat 37002241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 170; E-Value: 1e-90
Query Start/End: Original strand, 35 - 461
Target Start/End: Original strand, 36992080 - 36992500
Alignment:
Q  35 tgacaaacttatccgtagtattgttagcctttattgattcataaccatcgtataatatctccattagcaaaggagatgtcacaacaccatctnnnnnnnn 134  Q
    ||||||||||| |||||||||||| ||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||            
T  36992080 tgacaaacttagccgtagtattgtcagcatttattgattgataaccattgtataatatctccattagcaaaggagatgtcacagcaccatctacaaagaa 36992179  T
Q  135 ttgatgcaccaaggcttccttaattacatcttccttttcccaaatcattctgttcattgaacttgtgccactttctttcatttctttcatgaaagtacaa 234  Q
     || | ||||||||||||| ||||||||||||  |||||||||| ||||  || | ||||| ||  | |||||||||      ||   |||||||||||     
T  36992180 gtgcttcaccaaggcttccataattacatcttgtttttcccaaaacatttggtcctttgaaatttggtcactttctt------ct---atgaaagtacag 36992270  T
Q  235 aatctgcaaatattgaaaaatcatgttagttaattagcaaacaaaaaacttgagggagcgtgacgcccgnnnnnnnnnnnnnng-----aataacaaaat 329  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||  |||||  || ||||||||||                    ||||||||||     
T  36992271 aatctgcaaatattgaaaaatcatattagttaattagcaaacaaaaagtttgag--agtgtgacgcccgatttttttttttttttttttaataacaaaac 36992368  T
Q  330 atgggtttcaaaatttcatttctcataaattaagaatatcacatttaaattcacaacatttgtacaacatagacttctacaaaagcatcaaatacaaact 429  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36992369 atgggtttcaaaatttcatttctcataaattaagagtatcacatttaaattcacaacatttgtacaacatagactcctacaaaagcatcaaatacaaact 36992468  T
Q  430 tagactcctacaacgtttgtacaacatctgta 461  Q
    ||||||||| ||||||||||||||||| ||||    
T  36992469 tagactcctgcaacgtttgtacaacatttgta 36992500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 155; E-Value: 9e-82
Query Start/End: Original strand, 696 - 949
Target Start/End: Original strand, 36992609 - 36992855
Alignment:
Q  696 ccttagatattcttatagctaatatttagcttcccaacatatattctttaaacttaccaagttttaatcctttaggaaaaccataacttaatcacacaat 795  Q
    |||||||| |||||||| |||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||| |||| ||||||||||||||    
T  36992609 ccttagattttcttatatctaatatttagcttgccaacatatatcctttaaacttac-aagttttaatcctttaggaaaatcatagcttaatcacacaat 36992707  T
Q  796 ttgtcattttctggtcccatgactacatacttataaacttcatcacaatta--cactacacaagttcactaggatcaataaaattagtatgagatcaagg 893  Q
    |  |||||||        ||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  36992708 tcatcattttt-------atg-ctacatacttataaacttcatcacaattatacactacacaagttcactaggatcaataaaattagtatgagatcaagg 36992799  T
Q  894 ataaccatctaatagtaagattacacacattttgatattccctgggaagtatcctt 949  Q
    ||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  36992800 ataacgatctaatagtaagataacacacaatttgatattccctgggaagtatcctt 36992855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 155; E-Value: 9e-82
Query Start/End: Original strand, 697 - 942
Target Start/End: Original strand, 37002526 - 37002771
Alignment:
Q  697 cttagatattcttatagctaatatttagcttcccaacatatattctttaaacttaccaagttttaatcctttaggaaaaccataacttaatcacacaatt 796  Q
    ||||||| |||||||| |||||||||||||| ||||||||||||||| |||||||| |||||  ||||| ||||||||| ||||||||||||||||||||    
T  37002526 cttagattttcttatatctaatatttagcttgccaacatatattcttaaaacttac-aagttgaaatccattaggaaaatcataacttaatcacacaatt 37002624  T
Q  797 tgtcattttct-ggtcccatgactacatacttataaacttcatcacaattacactacacaagttcactaggatcaataaaattagtatgagatcaaggat 895  Q
     |||||||||| ||||||||||||||||||||||||||||||||  ||| ||||| ||||||||||||||||||||||||||||||| ||| ||||||||    
T  37002625 cgtcattttctaggtcccatgactacatacttataaacttcatctgaataacactgcacaagttcactaggatcaataaaattagtaagagctcaaggat 37002724  T
Q  896 aaccatctaatagtaagattacacacattttgatattccctgggaag 942  Q
    ||||||||||||||||||| || |||| |||||||| ||||||||||    
T  37002725 aaccatctaatagtaagatcacgcacaatttgatatgccctgggaag 37002771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 488 - 621
Target Start/End: Original strand, 37002274 - 37002409
Alignment:
Q  488 attattcctatttctaaggaagtgccagtggaattgacttagtccttccacaattcacgttttagtcaatggagtcattttatttagtggttttcatctc 587  Q
    ||||||||||||| | ||| ||||| | |||||||||||||||  ||||||||||||| ||| ||| | || |||||||||||||||| |||||||||||    
T  37002274 attattcctatttgttagggagtgctaatggaattgacttagtgtttccacaattcacatttaagttagtgtagtcattttatttagttgttttcatctc 37002373  T
Q  588 tccgtaagg--atattaaagacacctcttgtgcact 621  Q
    | |||||||  ||||||||| |||||||| ||||||    
T  37002374 ttcgtaaggctatattaaagccacctcttttgcact 37002409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 959 - 1021
Target Start/End: Original strand, 36993021 - 36993083
Alignment:
Q  959 gggtgtgaagaagagcatactggttttggagatggaagtgggactggaatagcgagaaccatt 1021  Q
    ||||||||||||||||||||||||||||||| || ||| ||||||||||||| ||||||||||    
T  36993021 gggtgtgaagaagagcatactggttttggagttgaaagagggactggaatagtgagaaccatt 36993083  T

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Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 634 - 685
Target Start/End: Original strand, 37002459 - 37002510
Alignment:
Q  634 tgataaattcccttatgttttactcttccatgtacatcatggtatgcacata 685  Q
    |||||||||||||| |||||||||||  ||||||||||||| ||||||||||    
T  37002459 tgataaattcccttctgttttactctgacatgtacatcatgatatgcacata 37002510  T

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Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 591 - 622
Target Start/End: Original strand, 36992498 - 36992529
Alignment:
Q  591 gtaaggatattaaagacacctcttgtgcactc 622  Q
    ||||||||||||||||||||||||||||||||    
T  36992498 gtaaggatattaaagacacctcttgtgcactc 36992529  T

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Target: chr7 (Bit Score: 62; Significance: 3e-26; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 318 - 391
Target Start/End: Original strand, 8596984 - 8597057
Alignment:
Q  318 gaataacaaaatatgggtttcaaaatttcatttctcataaattaagaatatcacatttaaattcacaacatttg 391  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8596984 gaataacaaaacatgggttccaaaatttcatttctcataaattaagagtatcacatttaaattcacaacatttg 8597057  T

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Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 8596901 - 8596959
Alignment:
Q  238 ctgcaaatattgaaaaatcat----gttagttaattagcaaacaaaaaacttgagggag 292  Q
    |||||||||||||||||||||     ||||||||||||||||||||||| || ||||||    
T  8596901 ctgcaaatattgaaaaatcatattaattagttaattagcaaacaaaaaattttagggag 8596959  T

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Target: chr3 (Bit Score: 30; Significance: 0.0000004; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 491 - 596
Target Start/End: Original strand, 27442791 - 27442895
Alignment:
Q  491 attcctatttctaaggaagtgccagtggaattgacttagtccttccacaattcacgttttagtcaatggagtcattttatttagtggttttcatctctcc 590  Q
    |||||||||| | |||||| |  ||||| |||||||||||  |||||| ||||||| |||||| | |||||||||||| |||||| | ||| |||| ||     
T  27442791 attcctatttgttaggaagggatagtgggattgacttagttgttccactattcacg-tttagttagtggagtcattttgtttagttggttttatctatct 27442889  T
Q  591 gtaagg 596  Q
    ||||||    
T  27442890 gtaagg 27442895  T

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Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 491 - 596
Target Start/End: Original strand, 27445947 - 27446051
Alignment:
Q  491 attcctatttctaaggaagtgccagtggaattgacttagtccttccacaattcacgttttagtcaatggagtcattttatttagtggttttcatctctcc 590  Q
    |||||||||| | |||||| |  ||||| |||||||||||  |||||| ||||||| |||||| | |||||||||||| |||||| | ||| |||| ||     
T  27445947 attcctatttgttaggaagggatagtgggattgacttagttgttccactattcacg-tttagttagtggagtcattttgtttagttggttttatctatct 27446045  T
Q  591 gtaagg 596  Q
    ||||||    
T  27446046 gtaagg 27446051  T

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Target: chr1 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 491 - 588
Target Start/End: Original strand, 12796262 - 12796358
Alignment:
Q  491 attcctatttctaaggaagtgccagtggaattgacttagtccttccacaattcacgttttagtcaatggagtcattttatttagtggttttcatctct 588  Q
    |||||||||| | |||||| |  ||||| |||||||||||  |||||| ||||||| |||||| | |||||||||||| |||||| | ||| ||||||    
T  12796262 attcctatttgttaggaagggatagtgggattgacttagttgttccactattcacg-tttagttagtggagtcattttgtttagttggttttatctct 12796358  T

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