View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2167_low_8 (Length: 338)
Name: NF2167_low_8
Description: NF2167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2167_low_8 |
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Alignment Details
Target: chr5 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 8 - 323
Target Start/End: Original strand, 40002311 - 40002625
Alignment:
| Q |
8 |
gatatgaatggttgtggtttgttaataccgtaaaacattttaaaccattcatttataaaaattaacctttatgtatactatgactatttgcaaaaaagta |
107 |
Q |
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| T |
40002311 |
gatatgaatggttgtggtttgttaataccgtaaaacattttaaaccattcatttatgaaaattaacttttatgtatactatgactatttgcaaaaaagta |
40002410 |
T |
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| Q |
108 |
gtcaataacgtatgacttaatttgataattaatagtgaataaactattagattacattttgaagtaacataagaaaaatgtcatatgaactgtaaaaaca |
207 |
Q |
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| T |
40002411 |
gtcaataacgtatgacttaatttgataattaataatgaataaactattagattaca-tttgaagtaacataagaaaaatgtcatatgaactgtaaaaaca |
40002509 |
T |
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| Q |
208 |
tgttactactactattaatatgagtattgacaattggattgagtctaatagaatgagttagactattaacaatataatgaatcaatactttagtgactgg |
307 |
Q |
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||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40002510 |
tgttattgctactattaatatgagtattaacaattggattgagtctaatagaatgagttagactattaacaatataatgaatcaatactttagtgactgg |
40002609 |
T |
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| Q |
308 |
atgaggtgttcaaatt |
323 |
Q |
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| T |
40002610 |
atgaggtgttcaaatt |
40002625 |
T |
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