View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21680_high_1_N (Length: 537)
Name: NF21680_high_1_N
Description: NF21680
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21680_high_1_N |
 | |
|
| [»] chr5 (12 HSPs) |
| |
|
| [»] scaffold0036 (1 HSPs) |
| | |
|
| [»] scaffold0160 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 447; Significance: 0; HSPs: 12)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 447; E-Value: 0
Query Start/End: Original strand, 1 - 537
Target Start/End: Original strand, 6296749 - 6297287
Alignment:
| Q |
1 |
attattggaagagtctcagattttaggaaccagttggcaccttccactagaagggaatgtgccattaaaagtttattacattagacatattttattcatg |
100 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6296749 |
attattggaaaagtctcagattttaggaaccagttggcaccttctactagaagggaatgtgccattaaaagtttattacattagacatattttattcatg |
6296848 |
T |
|
| Q |
101 |
ggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatctagcaactaatta |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |
|
|
| T |
6296849 |
ggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccagacaaaggagaaaaactaatctaacaactaatta |
6296948 |
T |
|
| Q |
201 |
ctaacatttgccattnnnnnnnnnngattttataaacgaaagtgagttttgtatgacattgacttgtatgtgtgcattattgtttaataaacttgtgcaa |
300 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6296949 |
ctaacatttgccattaaaaaaaaa-gattttataaacgaaagtgagttgcgtatgacattgacttgtatgtgtgcattattgtttaataaacttgtgcaa |
6297047 |
T |
|
| Q |
301 |
ccttgggtacatcatgtaaattcctgttgcaatacgctttgaacttgtatgtgtgcgttattgttttagtat---ttgattgactggcagcttgtacttg |
397 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
6297048 |
ccttgggtacatcatgtaaattcctgttgcaataagctttgaacttgtatgtgtgtgttattgttttagtatggtttgattgactggcagcttgtacttg |
6297147 |
T |
|
| Q |
398 |
caggtggcaatagattcagccacacctgttgacgatgctaggcccagtggaaattttatgatgaacaatagtatggaatcttttgggggatatggtggtc |
497 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
6297148 |
caggtggcaatagattcagccacacctgttgacgatgctaggcccagcggaaattttatgatgaacaatagtatggaatcttttgggggatatggcggtc |
6297247 |
T |
|
| Q |
498 |
cggtgcgaagttatgggaggatgtatggcggtttagacta |
537 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
6297248 |
cggtgcgaagttatgggaggatgtatggtggtttagacta |
6297287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 103 - 210
Target Start/End: Complemental strand, 29815024 - 29814917
Alignment:
| Q |
103 |
ggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatctagcaactaattact |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||||||||||||||||| || ||| |||||||| |
|
|
| T |
29815024 |
ggttgggtagctcaattggtttgagctaagggataaggagttggaggtcctaggttcaaacctgaacaaaggagaaaaactaatgtaacaaataattact |
29814925 |
T |
|
| Q |
203 |
aacatttg |
210 |
Q |
| |
|
|||||||| |
|
|
| T |
29814924 |
aacatttg |
29814917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 104 - 215
Target Start/End: Complemental strand, 10635407 - 10635295
Alignment:
| Q |
104 |
gttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggaga-aaaactaatctagcaactaattact |
202 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||| | ||||||| |||| | ||||| ||||||||||| |
|
|
| T |
10635407 |
gttgggtagctcaactggtttgagctaagggataaggagttggaggtcctggcttcaaacccgggcgaaggagaaaaaaatgatctaagaactaattact |
10635308 |
T |
|
| Q |
203 |
aacatttgccatt |
215 |
Q |
| |
|
||||||| ||||| |
|
|
| T |
10635307 |
aacattttccatt |
10635295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 100 - 189
Target Start/End: Complemental strand, 10707859 - 10707770
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatcta |
189 |
Q |
| |
|
||||||||| || ||||| || ||| ||||||||||||||||||| ||||||||| ||| |||||||||| ||||||||||| ||||||| |
|
|
| T |
10707859 |
gggggttggataactcaactgctttaagctaagggataaggagtttgaggttctgagtttaaacccggacgaaggagaaaaattaatcta |
10707770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 9002939 - 9003033
Alignment:
| Q |
120 |
ggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatctagcaactaattactaacatttgccatt |
215 |
Q |
| |
|
||||||||||||||| | ||||||||||||| | || ||||||||| | ||||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
9002939 |
ggtttgagctaagggttgaggagttggaggtaccgg-ttcaaacccaagcgaaggagaaaaactaatctaacaactaattactaacatttgtcatt |
9003033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 132 - 215
Target Start/End: Original strand, 39107768 - 39107853
Alignment:
| Q |
132 |
gggataaggagttggaggttctgggtt--caaacccggacaaaggagaaaaactaatctagcaactaattactaacatttgccatt |
215 |
Q |
| |
|
||||||||||||||||||| ||||||| ||||||| |||||||||||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
39107768 |
gggataaggagttggaggtcctgggttttcaaacccaactgaaggagaaaaactattctaacaactaattactaacatttgccatt |
39107853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 209
Target Start/End: Complemental strand, 11905047 - 11904940
Alignment:
| Q |
104 |
gttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaa--ctaatctagcaactaattac |
201 |
Q |
| |
|
||||||||| |||| ||||||||||||| ||| || |||| ||| || || |||||||| | ||| ||||||||||| ||||||||| |||||||||| |
|
|
| T |
11905047 |
gttgggtagttcaaatggtttgagctaaaggaaaaagagtcggaagtccttggttcaaatctggattaaggagaaaaaaactaatctagtaactaattac |
11904948 |
T |
|
| Q |
202 |
taacattt |
209 |
Q |
| |
|
|||||||| |
|
|
| T |
11904947 |
taacattt |
11904940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 109 - 189
Target Start/End: Complemental strand, 9860831 - 9860749
Alignment:
| Q |
109 |
gtagctcaattggtttgagctaagggataa-ggagttggaggttctgggttcaaacccggacaaaggag-aaaaactaatcta |
189 |
Q |
| |
|
||||||||| |||||||||||||||| ||| |||||||||||| ||| |||||||| | |||||||||| ||| ||||||||| |
|
|
| T |
9860831 |
gtagctcaactggtttgagctaagggttaaaggagttggaggtcctgagttcaaactcagacaaaggagtaaatactaatcta |
9860749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 39995744 - 39995660
Alignment:
| Q |
128 |
ctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatctagcaactaattactaacatttgccatt |
215 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||||||| || |||| | | ||||||| || |||||||||||||||||||||| |
|
|
| T |
39995744 |
ctaagggataaggagtttgaggtcctgggttcaaacccg---aacggagcagtattaatctaacagctaattactaacatttgccatt |
39995660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 120 - 150
Target Start/End: Complemental strand, 15024862 - 15024832
Alignment:
| Q |
120 |
ggtttgagctaagggataaggagttggaggt |
150 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
15024862 |
ggtttgagctaagggataaggagttggaggt |
15024832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 35097284 - 35097212
Alignment:
| Q |
108 |
ggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaa |
181 |
Q |
| |
|
|||||||||| ||||||||| |||| | ||| |||||||||| ||||||| ||||||| || ||||||||||| |
|
|
| T |
35097284 |
ggtagctcaactggtttgagtcaaggaaaaagaagttggaggt-ctgggtttaaacccgtacgaaggagaaaaa |
35097212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 109 - 148
Target Start/End: Original strand, 17898882 - 17898922
Alignment:
| Q |
109 |
gtagctcaattggtttgagctaagggat-aaggagttggag |
148 |
Q |
| |
|
||||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
17898882 |
gtagctcaattggttcgagctaagggataaaggagttggag |
17898922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 80; Significance: 3e-37; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 100 - 214
Target Start/End: Complemental strand, 33085019 - 33084904
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggaga-aaaactaatctagcaactaat |
198 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||| ||||| |||| ||||||| |||||||||||| |||||||| |
|
|
| T |
33085019 |
gggggttgggtagctcaactggtttgagctaagggatatggagttggaggtcctgggttaaaacctggacgaaggagaaaaaactaatctaacaactaat |
33084920 |
T |
|
| Q |
199 |
tactaacatttgccat |
214 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
33084919 |
tactaacatttgccat |
33084904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 100 - 215
Target Start/End: Complemental strand, 33872905 - 33872788
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaa-gggataaggagttggaggttctgggttcaaacccggacaaagga-gaaaaactaatctagc-aacta |
196 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||| |||| ||||||||||||||| |||||||||| ||| |||||||| ||| | ||||||| | ||||| |
|
|
| T |
33872905 |
gggggttgggtaactcaactggtttgagctaaagggaaaaggagttggaggttttgggttcaaa-ccgaacaaaggactaaatattaatctaacaaacta |
33872807 |
T |
|
| Q |
197 |
attactaacatttgccatt |
215 |
Q |
| |
|
| ||||||||||||||||| |
|
|
| T |
33872806 |
actactaacatttgccatt |
33872788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 101 - 215
Target Start/End: Complemental strand, 40778289 - 40778180
Alignment:
| Q |
101 |
ggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatctagcaactaatta |
200 |
Q |
| |
|
|||||||||||||| || |||||||| ||||||||||||||||||||| | | ||||||| |||||||||||||||||||| | |||||||||| |
|
|
| T |
40778289 |
ggggttgggtagctgaactggtttgaactaagggataaggagttggagctc-----tcaaaacccgaacaaaggagaaaaactaatcgaacaactaatta |
40778195 |
T |
|
| Q |
201 |
ctaacatttgccatt |
215 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
40778194 |
ataacatttggcatt |
40778180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 215
Target Start/End: Original strand, 37829930 - 37830033
Alignment:
| Q |
114 |
tcaattggtttgagctaagggataa-ggagttggaggttctgggttcaaacccggacaaaggagaaaa-actaatctagcaactaattactaacatttgc |
211 |
Q |
| |
|
|||| |||||||| ||||||| ||| ||||||||| || |||| ||||||||||||| |||||| | | | ||||||| |||||||||||||||||||| |
|
|
| T |
37829930 |
tcaactggtttgatctaagggttaaaggagttggaagtcctggcttcaaacccggacgaaggagtagatattaatctaacaactaattactaacatttgt |
37830029 |
T |
|
| Q |
212 |
catt |
215 |
Q |
| |
|
|||| |
|
|
| T |
37830030 |
catt |
37830033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 41437116 - 41437160
Alignment:
| Q |
91 |
tttattcatgggggttgggtagctcaattggtttgagctaaggga |
135 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
41437116 |
tttattctagggggttgggtagctcaactggtttgagctaaggga |
41437160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 22812819 - 22812878
Alignment:
| Q |
102 |
gggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaa |
161 |
Q |
| |
|
|||||| ||| ||||| |||||| ||||||||| ||||||||||||||| || ||||||| |
|
|
| T |
22812819 |
gggttgagtacctcaactggtttcagctaagggttaaggagttggaggtcctcggttcaa |
22812878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 208
Target Start/End: Complemental strand, 29911049 - 29911018
Alignment:
| Q |
177 |
aaaaactaatctagcaactaattactaacatt |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
29911049 |
aaaaactaatctagcaactaattactaacatt |
29911018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 12272536 - 12272486
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggataaggagttggaggt |
150 |
Q |
| |
|
|||||||||||| ||||| ||||||||| ||| || ||||||||||||||| |
|
|
| T |
12272536 |
gggggttgggtaactcaactggtttgagttaatggttaaggagttggaggt |
12272486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 100 - 146
Target Start/End: Complemental strand, 32002199 - 32002153
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggataaggagttgg |
146 |
Q |
| |
|
||||||||| |||||||| |||||||||||||||| ||||| ||||| |
|
|
| T |
32002199 |
gggggttggttagctcaactggtttgagctaagggttaaggtgttgg |
32002153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 100 - 134
Target Start/End: Complemental strand, 46977008 - 46976974
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaaggg |
134 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| |
|
|
| T |
46977008 |
gggggttgggtagctcaactggtttgagctaaggg |
46976974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 22896175 - 22896223
Alignment:
| Q |
102 |
gggttgggtagctcaattggtttgagctaagggataaggagttggaggt |
150 |
Q |
| |
|
|||||| ||| ||| |||||||||||||||||| |||| |||||||||| |
|
|
| T |
22896175 |
gggttgagtacctcgattggtttgagctaagggttaagaagttggaggt |
22896223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 44184313 - 44184249
Alignment:
| Q |
101 |
ggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaaccc |
165 |
Q |
| |
|
||||||| ||| ||||| |||||||| ||||||| ||| ||||||||||| || |||||||||| |
|
|
| T |
44184313 |
ggggttgagtaactcaactggtttgaactaagggttaatgagttggaggtcatgtgttcaaaccc |
44184249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 147
Target Start/End: Original strand, 48310133 - 48310177
Alignment:
| Q |
103 |
ggttgggtagctcaattggtttgagctaagggataaggagttgga |
147 |
Q |
| |
|
|||| ||||| ||||||||||||||||||| ||||| |||||||| |
|
|
| T |
48310133 |
ggtttggtagttcaattggtttgagctaagagataaagagttgga |
48310177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 79; Significance: 1e-36; HSPs: 27)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 101 - 215
Target Start/End: Complemental strand, 18635779 - 18635665
Alignment:
| Q |
101 |
ggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatctagcaactaatta |
200 |
Q |
| |
|
|||||||||||| |||| |||| ||||||||||||||||||||| ||||| ||||||||||| ||||||||| |||||||||| ||||| |||||||||| |
|
|
| T |
18635779 |
ggggttgggtagttcaactggtctgagctaagggataaggagtttgaggtcctgggttcaaatccggacaaatgagaaaaactgatctaacaactaatta |
18635680 |
T |
|
| Q |
201 |
ctaacatttgccatt |
215 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
18635679 |
ctaacatttgccatt |
18635665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 104 - 207
Target Start/End: Complemental strand, 36472710 - 36472607
Alignment:
| Q |
104 |
gttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaagga-gaaaaactaatctagcaactaattact |
202 |
Q |
| |
|
|||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||| |||| |
|
|
| T |
36472710 |
gttgggtagctcaactggtctgagctaagggataaggagttggaggtcctgggttcaaacccggacaaaggaggaaaaactaatctaacaactaa-tact |
36472612 |
T |
|
| Q |
203 |
aacat |
207 |
Q |
| |
|
||||| |
|
|
| T |
36472611 |
aacat |
36472607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 100 - 211
Target Start/End: Complemental strand, 32336800 - 32336690
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatctagcaactaatt |
199 |
Q |
| |
|
|||||||||||||||||| | |||| || ||||||||||||||||| |||| |||||||||||| |||||||||||||||| ||||||| |||| |||| |
|
|
| T |
32336800 |
gggggttgggtagctcaactcgtttaagttaagggataaggagttgaaggtcttgggttcaaaccaggacaaaggagaaaaattaatctaacaac-aatt |
32336702 |
T |
|
| Q |
200 |
actaacatttgc |
211 |
Q |
| |
|
| |||||||||| |
|
|
| T |
32336701 |
attaacatttgc |
32336690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 44752038 - 44751973
Alignment:
| Q |
107 |
gggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaa |
172 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
44752038 |
gggtagctcaactggtttgagctaagggataaggggttggaggttctgggttcaaacccggacaaa |
44751973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 100 - 209
Target Start/End: Original strand, 10799194 - 10799304
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggag-aaaaactaatctagcaactaat |
198 |
Q |
| |
|
|||| ||||||||||||| | ||||||||||||||||||| ||||| || | ||||||||||||| ||| |||||| ||| | ||||||| |||||||| |
|
|
| T |
10799194 |
ggggattgggtagctcaactagtttgagctaagggataagtagttgaagttcctgggttcaaaccaggatgaaggagtaaatattaatctaacaactaat |
10799293 |
T |
|
| Q |
199 |
tactaacattt |
209 |
Q |
| |
|
||||||||||| |
|
|
| T |
10799294 |
tactaacattt |
10799304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 122 - 210
Target Start/End: Original strand, 42535701 - 42535789
Alignment:
| Q |
122 |
tttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatctagcaactaattactaacatttg |
210 |
Q |
| |
|
|||||| ||| |||||||||||| |||||||| ||||||||||| || ||| |||||||| |||||| |||||||||||||||||||| |
|
|
| T |
42535701 |
tttgagttaaaggataaggagtttgaggttctaggttcaaacccaaacgaagaagaaaaacgaatctaacaactaattactaacatttg |
42535789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 100 - 215
Target Start/End: Complemental strand, 52678929 - 52678815
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatctagcaactaatt |
199 |
Q |
| |
|
|||||||| || ||||| |||||||||| ||||||||||||||||| || ||||||| ||||||| || |||| |||| | ||||||||||| |||| |
|
|
| T |
52678929 |
gggggttgagtcgctcagctggtttgagcctagggataaggagttggaagtcctgggttaaaacccgaacggagga-aaaagccaatctagcaacaaatt |
52678831 |
T |
|
| Q |
200 |
actaacatttgccatt |
215 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
52678830 |
actaacatttgccatt |
52678815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 32398770 - 32398831
Alignment:
| Q |
154 |
gggttcaaacccggacaaaggagaaaaactaatctagcaactaattactaacatttgccatt |
215 |
Q |
| |
|
|||||||||| | ||| ||||||||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
32398770 |
gggttcaaactcagacgaaggagaaaaactaatctaacaactaattactaatatttgccatt |
32398831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 6871196 - 6871256
Alignment:
| Q |
104 |
gttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacc |
164 |
Q |
| |
|
||||||||||| |||||||||||| ||||||||||||| ||||| || ||||||||||||| |
|
|
| T |
6871196 |
gttgggtagcttaattggtttgagttaagggataaggacttggatgtcctgggttcaaacc |
6871256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 32423624 - 32423556
Alignment:
| Q |
108 |
ggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggag |
176 |
Q |
| |
|
||||||||| |||||||| |||||||||||| |||||||| | |||||||||||||||||||||||| |
|
|
| T |
32423624 |
ggtagctcagctggtttgaactaagggataagaagttggagttcttgggttcaaacccggacaaaggag |
32423556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 99 - 197
Target Start/End: Complemental strand, 38487838 - 38487740
Alignment:
| Q |
99 |
tgggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggag-aaaaactaatctagcaactaa |
197 |
Q |
| |
|
||||||||||||||||||| || |||||| |||||| ||||||| ||||||| || |||||||| || ||| | |||| ||||||||||||| ||||||| |
|
|
| T |
38487838 |
tgggggttgggtagctcaactgatttgagttaagggttaaggagatggaggtcct-ggttcaaatcccgacgacggagaaaaaactaatctaacaactaa |
38487740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 100 - 162
Target Start/End: Complemental strand, 16934396 - 16934334
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaa |
162 |
Q |
| |
|
|||||||||||| ||||| | |||||||| |||||| || ||||||||||||||||||||||| |
|
|
| T |
16934396 |
gggggttgggtaactcaagttgtttgagccaagggaaaatgagttggaggttctgggttcaaa |
16934334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 5268027 - 5267931
Alignment:
| Q |
123 |
ttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaac----taatctagcaactaattactaacatttgccatt |
215 |
Q |
| |
|
||||||||| |||||||||||||||||| |||||||||||| || |||| |||||||| ||||||| ||||||| | |||||||||||||| |
|
|
| T |
5268027 |
ttgagctaaaggataaggagttggaggtcttgggttcaaacctgggcaaaagagaaaaaaaaattaatctaacaactaaccattaacatttgccatt |
5267931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 104 - 147
Target Start/End: Original strand, 43965071 - 43965114
Alignment:
| Q |
104 |
gttgggtagctcaattggtttgagctaagggataaggagttgga |
147 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| ||||||| |
|
|
| T |
43965071 |
gttgggtagctcaattggtttgagctaagagataagaagttgga |
43965114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 40543153 - 40543096
Alignment:
| Q |
152 |
ctgggttcaaacccggacaaaggaga--aaaactaatctagcaactaattactaacat |
207 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||| |||| ||||||||||||||||| |
|
|
| T |
40543153 |
ctgggtacaaacccggacaaaggagaaaaaaactattctaacaactaattactaacat |
40543096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 43183809 - 43183731
Alignment:
| Q |
98 |
atgggggttgggtagctcaattggtttgagctaagggataa-ggagttggaggttctgggttcaaacccggacaaagga |
175 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| || ||| |||||| ||||| |||||| |||||| ||| ||||| |
|
|
| T |
43183809 |
atgggggttgggtagctcaactggtttgagctaaaggttaatggagttcgaggtcgtgggttaaaacccagacgaagga |
43183731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 211
Target Start/End: Complemental strand, 45443536 - 45443434
Alignment:
| Q |
106 |
tgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaa-actaatctagcaa-ctaattacta |
203 |
Q |
| |
|
|||||||| ||| |||||||||| |||||| || ||||||||||| ||||||||||||||| |||||| ||| | ||||||| ||| |||||||||| |
|
|
| T |
45443536 |
tgggtagcacaactggtttgagc-aagggaaaaagagttggaggt----ggttcaaacccggacgaaggagtaaatattaatctaacaaactaattacta |
45443442 |
T |
|
| Q |
204 |
acatttgc |
211 |
Q |
| |
|
|||||||| |
|
|
| T |
45443441 |
acatttgc |
45443434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 11098944 - 11098991
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggataaggagttgga |
147 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||||||||||| |
|
|
| T |
11098944 |
gggggttgggtagctcagcaggtttgagctaagggttaaggagttgga |
11098991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 49294532 - 49294571
Alignment:
| Q |
99 |
tgggggttgggtagctcaattggtttgagctaagggataa |
138 |
Q |
| |
|
||||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
49294532 |
tgggggttgggtagctcaactggtttgagttaagggataa |
49294571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 9454461 - 9454522
Alignment:
| Q |
102 |
gggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaac |
163 |
Q |
| |
|
|||||| ||| ||||| |||||||||||||| ||||||||||| |||| |||| ||||||| |
|
|
| T |
9454461 |
gggttgagtaactcaagtggtttgagctaagatataaggagttgaaggtcctggattcaaac |
9454522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 28308492 - 28308443
Alignment:
| Q |
102 |
gggttgggtagctcaattggtttgagctaagggataaggagttggaggtt |
151 |
Q |
| |
|
|||||||||||||||| | ||||||||||||||||| ||| |||||||| |
|
|
| T |
28308492 |
gggttgggtagctcaactaatttgagctaagggataaagagatggaggtt |
28308443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 40009120 - 40009079
Alignment:
| Q |
123 |
ttgagctaagggataaggagttggaggttctgggttcaaacc |
164 |
Q |
| |
|
||||||||||||| |||||||||||||| ||| ||||||||| |
|
|
| T |
40009120 |
ttgagctaagggaaaaggagttggaggtcctgcgttcaaacc |
40009079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 40172518 - 40172575
Alignment:
| Q |
107 |
gggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacc |
164 |
Q |
| |
|
|||||||| || | ||||||||| |||| |||||||||||||| ||||||||||||| |
|
|
| T |
40172518 |
gggtagctaaactagtttgagctgggggaaaaggagttggaggtcctgggttcaaacc |
40172575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 47404941 - 47404880
Alignment:
| Q |
155 |
ggttcaaacccggacaaaggagaaaa-actaatctagcaactaattactaacatttgccatt |
215 |
Q |
| |
|
|||||||||||||||| ||||| ||| | ||||||| || ||||||||||||| |||||||| |
|
|
| T |
47404941 |
ggttcaaacccggacacaggagtaaatattaatctaacatctaattactaacaattgccatt |
47404880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 27845415 - 27845475
Alignment:
| Q |
102 |
gggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaa |
162 |
Q |
| |
|
|||||||||||||||| || |||||||||||| | | ||||| ||||||||| ||||||| |
|
|
| T |
27845415 |
gggttgggtagctcaactgatttgagctaaggaaaagagagttagaggttctgagttcaaa |
27845475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 32183286 - 32183224
Alignment:
| Q |
156 |
gttcaaacccggacaaaggagaaaaa---ctaatctagcaactaattactaacatttgccatt |
215 |
Q |
| |
|
||||||||||||| |||| ||||||| |||||||| ||||||| |||||| |||||||||| |
|
|
| T |
32183286 |
gttcaaacccggataaagaagaaaaaaaactaatctaacaactaactactaatatttgccatt |
32183224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 50658034 - 50657946
Alignment:
| Q |
101 |
ggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatcta |
189 |
Q |
| |
|
||||||||||||||||||| ||||| | ||| |||| ||||||| || | || ||| |||| |||||||| |||||||||| ||||| |
|
|
| T |
50658034 |
ggggttgggtagctcaattagtttgcgttaaatgatacggagttgaagttgttgagtttaaactcggacaaaagagaaaaactgatcta |
50657946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 76; Significance: 7e-35; HSPs: 19)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 100 - 215
Target Start/End: Original strand, 1652530 - 1652645
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatctagcaactaatt |
199 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| | |||||||| || |||||||||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
1652530 |
ggggattgggtagctcaactggtttgagctaagggataagaaattggaggtcctaggttcaaacccggatgaaggagaaaaactaatctaacaactaatt |
1652629 |
T |
|
| Q |
200 |
actaacatttgccatt |
215 |
Q |
| |
|
|| ||||||||||||| |
|
|
| T |
1652630 |
accaacatttgccatt |
1652645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 100 - 189
Target Start/End: Original strand, 26009785 - 26009875
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggag-aaaaactaatcta |
189 |
Q |
| |
|
|||||||||||||||||| |||||||||| ||||||||| ||||||||||| |||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
26009785 |
gggggttgggtagctcaactggtttgagccaagggataaagagttggaggtcctgggttcaaacccggacgaaggagaaaaaactaatcta |
26009875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 100 - 196
Target Start/End: Original strand, 32103573 - 32103669
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatctagcaacta |
196 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||| ||||||||||||| |||||||||||| |||| ||| |||||| ||||||| |||||| |
|
|
| T |
32103573 |
gggggttgggtagctcaactagtttgagctaagggatgaggagttggaggtcatgggttcaaacctggacggaggtgaaaaagtaatctaacaacta |
32103669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 101 - 215
Target Start/End: Complemental strand, 41508255 - 41508140
Alignment:
| Q |
101 |
ggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggag-aaaaactaatctagcaactaatt |
199 |
Q |
| |
|
||||||| |||| | ||||| |||||||||||||||||| |||| ||||||||| |||||||||||||| |||||| ||| | |||| || ||||||||| |
|
|
| T |
41508255 |
ggggttgagtagttaaattgatttgagctaagggataagaagttagaggttctgagttcaaacccggacgaaggagtaaatattaatataacaactaatt |
41508156 |
T |
|
| Q |
200 |
actaacatttgccatt |
215 |
Q |
| |
|
|||||||||| |||| |
|
|
| T |
41508155 |
gctaacatttgtcatt |
41508140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 10429947 - 10429871
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggag |
176 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||| |||||| | ||||||||||| || ||||||| |
|
|
| T |
10429947 |
gggggttgggtagctcaactggtttgagctaagggataaggagtaggaggtctttggttcaaacccagaaaaaggag |
10429871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 104 - 181
Target Start/End: Original strand, 8734464 - 8734541
Alignment:
| Q |
104 |
gttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaa |
181 |
Q |
| |
|
||||||||||| || ||||||||||| |||||||||||||||||||| |||||||||| ||||| |||||| ||||| |
|
|
| T |
8734464 |
gttgggtagcttaactggtttgagctgagggataaggagttggaggtattgggttcaaatccggataaaggaaaaaaa |
8734541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 26281922 - 26282032
Alignment:
| Q |
108 |
ggtagctcaattggtttgagcta--agggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaact-aatctagcaactaattactaa |
204 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||| ||||| ||||| || ||||| || |||||||||| | |||||| ||||||| ||||| |
|
|
| T |
26281922 |
ggtagttcaattggtttgagctataagggataaggagttagaggtcttgggtccagacccgaacggaggagaaaaaattaatctaacaactaaccactaa |
26282021 |
T |
|
| Q |
205 |
catttgccatt |
215 |
Q |
| |
|
||||||||||| |
|
|
| T |
26282022 |
catttgccatt |
26282032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 107 - 150
Target Start/End: Complemental strand, 14195247 - 14195204
Alignment:
| Q |
107 |
gggtagctcaattggtttgagctaagggataaggagttggaggt |
150 |
Q |
| |
|
||||||||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
14195247 |
gggtagctcaactggtttgagctaagggttaaggagttggaggt |
14195204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 138
Target Start/End: Complemental strand, 26849310 - 26849272
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggataa |
138 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
26849310 |
gggggttgggtagctcaactggtttgagctaagggataa |
26849272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 208
Target Start/End: Complemental strand, 4353730 - 4353643
Alignment:
| Q |
119 |
tggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaa-ctaatctagcaactaattactaacatt |
208 |
Q |
| |
|
||||||||| |||||||| ||||| ||||| || ||||||||||||| ||||||||||| |||||||| ||| |||||||||||||| |
|
|
| T |
4353730 |
tggtttgagataagggat---gagttagaggtcctaggttcaaacccggctgaaggagaaaaaactaatctaacaattaattactaacatt |
4353643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 10223451 - 10223395
Alignment:
| Q |
160 |
aaacccggacaaaggagaaaaact-aatctagcaactaattactaacatttgccatt |
215 |
Q |
| |
|
|||||||||||||||||||||| | ||| || |||||||||||||||||||| |||| |
|
|
| T |
10223451 |
aaacccggacaaaggagaaaaaatcaatttaacaactaattactaacatttgtcatt |
10223395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 136
Target Start/End: Original strand, 36959382 - 36959418
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggat |
136 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||| |
|
|
| T |
36959382 |
gggggttgggtagctcaactggtttgagctaagggat |
36959418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 16452277 - 16452218
Alignment:
| Q |
102 |
gggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaa |
161 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| | | |||||||||| ||||||||| |
|
|
| T |
16452277 |
gggttgggtagctcaactggtttgagctaagggttcaaaagttggaggtcttgggttcaa |
16452218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 15646806 - 15646856
Alignment:
| Q |
102 |
gggttgggtagctcaattggtttgagctaagggataaggagttggaggttc |
152 |
Q |
| |
|
||||| |||||||||| ||||||||||||| | ||||||||||||||||| |
|
|
| T |
15646806 |
gggttcggtagctcaactggtttgagctaaatgttaaggagttggaggttc |
15646856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 830761 - 830680
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaa |
181 |
Q |
| |
|
|||||||||||| |||| |||||||||||||| |||||| | ||| |||| | |||||||||| | |||||| ||||||| |
|
|
| T |
830761 |
gggggttgggtatgtcaactggtttgagctaagcgataagaatttgaaggtcccaggttcaaacctgaacaaagaagaaaaa |
830680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 18283814 - 18283855
Alignment:
| Q |
164 |
ccggacaaaggagaaaaactaatctagcaactaattactaac |
205 |
Q |
| |
|
|||||| |||||||||||||| |||| ||||||||||||||| |
|
|
| T |
18283814 |
ccggacgaaggagaaaaactattctaacaactaattactaac |
18283855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 180
Target Start/End: Original strand, 36221187 - 36221268
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggat-aaggagttggaggttctgggttcaaacccggacaaaggagaaaa |
180 |
Q |
| |
|
||||||||||||||| || |||||||| |||||| | |||||||| |||| || |||||||||| ||| | |||||||||| |
|
|
| T |
36221187 |
gggggttgggtagctaaactggtttgatttaagggttaaaggagttcgaggatcagggttcaaactcgggcgaaggagaaaa |
36221268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 150
Target Start/End: Complemental strand, 42334878 - 42334846
Alignment:
| Q |
118 |
ttggtttgagctaagggataaggagttggaggt |
150 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| |
|
|
| T |
42334878 |
ttggtttgagctacgggataaggagttggaggt |
42334846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 209
Target Start/End: Complemental strand, 45125941 - 45125833
Alignment:
| Q |
102 |
gggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggaga-aaaactaatctagcaactaatta |
200 |
Q |
| |
|
|||||| ||| ||||||||||||||| ||| |||||||||||| || | | | ||| ||||||| || ||||||| ||||| |||||| |||| |||| |
|
|
| T |
45125941 |
gggttgtgtatctcaattggtttgagttaaaagataaggagttgaagttcccgagtttaaacccgaacgaaggagaaaaaacaaatctaataactcatta |
45125842 |
T |
|
| Q |
201 |
ctaacattt |
209 |
Q |
| |
|
| ||||||| |
|
|
| T |
45125841 |
caaacattt |
45125833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 72; Significance: 2e-32; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 31957881 - 31957988
Alignment:
| Q |
108 |
ggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatctagcaactaattactaacat |
207 |
Q |
| |
|
|||||||| | |||||||||||||||||||||||||||||||| ||||||| |||||| || |||||||||||||||||||| |||||||| | |||||| |
|
|
| T |
31957881 |
ggtagctcgactggtttgagctaagggataaggagttggaggtcctgggttgaaacccagataaaggagaaaaactaatctaacaactaatcattaacat |
31957980 |
T |
|
| Q |
208 |
ttgccatt |
215 |
Q |
| |
|
|||||||| |
|
|
| T |
31957981 |
ttgccatt |
31957988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 106 - 215
Target Start/End: Original strand, 29169533 - 29169645
Alignment:
| Q |
106 |
tgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggag---aaaaactaatctagcaactaattact |
202 |
Q |
| |
|
|||||||||||| |||||||| ||||||||||||||||||||| || ||||||| ||||||||||| ||||||| |||||||||||||||||| |
|
|
| T |
29169533 |
tgggtagctcaacctgtttgagccaagggataaggagttggaggtcttgaattcaaacatggacaaaggaggaaaaaaacttatctagcaactaattact |
29169632 |
T |
|
| Q |
203 |
aacatttgccatt |
215 |
Q |
| |
|
||||||||||||| |
|
|
| T |
29169633 |
aacatttgccatt |
29169645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 21537469 - 21537543
Alignment:
| Q |
107 |
gggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaa |
181 |
Q |
| |
|
||||||||||| | |||||||||||||| ||||||||||||||| |||||||||| |||| ||||||||||| |
|
|
| T |
21537469 |
gggtagctcaactagtttgagctaagggttaaggagttggaggtctaaggttcaaaccaggacgaaggagaaaaa |
21537543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 6958976 - 6959057
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaa |
181 |
Q |
| |
|
|||| |||||||||||| ||||||||||||| |||||||||| ||||||| | | |||||||| ||| ||||||||||| |
|
|
| T |
6958976 |
ggggtttgggtagctcagctggtttgagctaaaggataaggagatggaggtcatagattcaaacctagacgaaggagaaaaa |
6959057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 3797911 - 3797852
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttc |
159 |
Q |
| |
|
||||||||| ||||||||||| ||||| ||||||| ||||||| | ||||||| |||||| |
|
|
| T |
3797911 |
gggggttggatagctcaattgatttgaactaagggttaaggagctcgaggttcagggttc |
3797852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 69; Significance: 1e-30; HSPs: 23)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 100 - 196
Target Start/End: Original strand, 8456800 - 8456896
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatctagcaacta |
196 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| |||||||| |||||| |
|
|
| T |
8456800 |
ggggcttgggtagctcaactggtttgagctaagggataaggagttggatgtcctgggttcaaacccggacaaaggacaaaagctaatctaacaacta |
8456896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 100 - 215
Target Start/End: Original strand, 30979818 - 30979934
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggag-aaaaactaatctagcaactaat |
198 |
Q |
| |
|
|||| ||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||| |||||| ||||||||||||| |||||||| |
|
|
| T |
30979818 |
ggggattgggtagctcaactggtttgagctaagggataaggagttggaggtcttgggctcaaacccggacgaaggagaaaaaactaatctaacaactaat |
30979917 |
T |
|
| Q |
199 |
tactaacatttgccatt |
215 |
Q |
| |
|
||||||| || ||||| |
|
|
| T |
30979918 |
cactaacacttaccatt |
30979934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 106 - 215
Target Start/End: Complemental strand, 38273033 - 38272927
Alignment:
| Q |
106 |
tgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatctagcaactaattactaac |
205 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |||||| |||||| ||||||||||||||| || |||||| ||||||||| |||||| ||||||| |
|
|
| T |
38273033 |
tgggtagctcaactggtttgagctaagggataagaagttgggggttcttggttcaaacccggac-aacgagaaatactaatctaacaacta--tactaac |
38272937 |
T |
|
| Q |
206 |
atttgccatt |
215 |
Q |
| |
|
||||| |||| |
|
|
| T |
38272936 |
atttgtcatt |
38272927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 103 - 197
Target Start/End: Original strand, 2097082 - 2097177
Alignment:
| Q |
103 |
ggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggag-aaaaactaatctagcaactaa |
197 |
Q |
| |
|
||||||||||||||| | |||||||||||||| ||||||||||||||| |||||||||||||||||||| |||| ||| | ||||||| ||||||| |
|
|
| T |
2097082 |
ggttgggtagctcaactagtttgagctaagggttaaggagttggaggtcctgggttcaaacccggacaagggagtaaatattaatctaacaactaa |
2097177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 108 - 209
Target Start/End: Original strand, 38020376 - 38020478
Alignment:
| Q |
108 |
ggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggag-aaaaactaatctagcaactaattactaaca |
206 |
Q |
| |
|
|||||||||| |||||||||||||||| ||||||||||||||| | ||||||||||||||| |||||| ||| | ||||||| ||||| |||||||||| |
|
|
| T |
38020376 |
ggtagctcaactggtttgagctaagggttaaggagttggaggtccaaggttcaaacccggacgaaggagtaaatattaatctaacaactgattactaaca |
38020475 |
T |
|
| Q |
207 |
ttt |
209 |
Q |
| |
|
||| |
|
|
| T |
38020476 |
ttt |
38020478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 101 - 212
Target Start/End: Original strand, 38450695 - 38450806
Alignment:
| Q |
101 |
ggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatctagcaactaatta |
200 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| |||| ||||||||| |||||||||||| |||||| || || ||| | ||||| ||| |||||| |
|
|
| T |
38450695 |
ggggttgggtagctcaactggtttgagctaagggttaagaagttggaggctctgggttcaaatccggacgaataagtaaatattatctaacaattaatta |
38450794 |
T |
|
| Q |
201 |
ctaacatttgcc |
212 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
38450795 |
ctaaaatttgcc |
38450806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 101 - 204
Target Start/End: Complemental strand, 33802015 - 33801912
Alignment:
| Q |
101 |
ggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatctagcaactaatta |
200 |
Q |
| |
|
||||||| |||| |||| || ||||||||||||||||| ||||| |||| |||||||||||| |||| ||||| ||||| ||||||| |||||||||| |
|
|
| T |
33802015 |
ggggttgagtagttcaactgatttgagctaagggataatgagtttaaggtcttgggttcaaacctggacgaaggaaaaaaagtaatctaacaactaatta |
33801916 |
T |
|
| Q |
201 |
ctaa |
204 |
Q |
| |
|
|||| |
|
|
| T |
33801915 |
ctaa |
33801912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 29728862 - 29728801
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaa |
161 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| ||||||||||||| ||| |||||||| |
|
|
| T |
29728862 |
gggggttgggtagctcaactggtttgagctaagggttaaggagttggagattcagggttcaa |
29728801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 42687614 - 42687711
Alignment:
| Q |
101 |
ggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggag-aaaaactaatctagcaactaa |
197 |
Q |
| |
|
|||||||||| |||||| |||||||| |||| |||||||||||| ||||| ||| |||||||||||||| |||| | |||||| |||||||| ||||| |
|
|
| T |
42687614 |
ggggttgggtcgctcaactggtttgatctaaaggataaggagttcgaggtcctgagttcaaacccggacgaaggtgaaaaaaccaatctagctactaa |
42687711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 136 - 215
Target Start/End: Complemental strand, 12572427 - 12572348
Alignment:
| Q |
136 |
taaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatctagcaactaattactaacatttgccatt |
215 |
Q |
| |
|
|||| ||||||||| || ||||||||||| ||||| |||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
12572427 |
taagaagttggaggcccttggttcaaacccatacaaatgagaaaaactaatctagccattaattactaacatttgccatt |
12572348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 215
Target Start/End: Original strand, 6478420 - 6478507
Alignment:
| Q |
130 |
aagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaa-actaatctagc-aactaattactaacatttgccatt |
215 |
Q |
| |
|
|||||| ||||||||||||| ||| ||||||||||||||||||||||||| | ||||||| | |||||| |||||| |||||||||| |
|
|
| T |
6478420 |
aagggaaaaggagttggagggcctgtgttcaaacccggacaaaggagaaaatattaatctaacaaactaactactaatatttgccatt |
6478507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 167
Target Start/End: Original strand, 25391012 - 25391079
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccgg |
167 |
Q |
| |
|
|||| |||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||| |
|
|
| T |
25391012 |
ggggattgggtagctcatctggtttgagctaagggaaaaagagttggaggtagtgggttcaaacccgg |
25391079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 200
Target Start/End: Complemental strand, 34702991 - 34702888
Alignment:
| Q |
97 |
catgggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatctagcaacta |
196 |
Q |
| |
|
|||| ||||||||||| ||| || ||||||| ||||||||||||||||||| |||||| |||||||||| || || |||| ||| ||| | |||| ||| |
|
|
| T |
34702991 |
catgcgggttgggtagttcatctgatttgagccaagggataaggagttggagtttctggtttcaaacccgaacgaaagagagaaattaaacgagcagcta |
34702892 |
T |
|
| Q |
197 |
atta |
200 |
Q |
| |
|
|||| |
|
|
| T |
34702891 |
atta |
34702888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 50289734 - 50289809
Alignment:
| Q |
101 |
ggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggag |
176 |
Q |
| |
|
|||||| ||||||| || |||||||| |||||| | ||| |||||||||| || |||||||||||||||||||||| |
|
|
| T |
50289734 |
ggggtttggtagcttaagtggtttgaactaaggcaaaagaagttggaggtcctaggttcaaacccggacaaaggag |
50289809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 132 - 215
Target Start/End: Complemental strand, 51421533 - 51421450
Alignment:
| Q |
132 |
gggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatctagcaactaattactaacatttgccatt |
215 |
Q |
| |
|
||||||||||||||||||| || || |||||| |||||||||||||||||||| || ||| |||||||||||| ||| |||| |
|
|
| T |
51421533 |
gggataaggagttggaggtccttattttaaacccagacaaaggagaaaaactaatataacaattaattactaacagttgtcatt |
51421450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 20228273 - 20228339
Alignment:
| Q |
110 |
tagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggag |
176 |
Q |
| |
|
|||||||| | |||||||||||||| ||||||||||||||| ||||||||||||| || ||||||| |
|
|
| T |
20228273 |
tagctcaactagtttgagctaagggttaaggagttggaggtcttgggttcaaacccagataaaggag |
20228339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 108 - 210
Target Start/End: Complemental strand, 30806459 - 30806357
Alignment:
| Q |
108 |
ggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatctagcaactaattactaacat |
207 |
Q |
| |
|
||||||||||||| ||||| | ||| |||||||||||||||||| | ||| ||| |||||||| ||||||||||||||| |||| |||| |||||| |
|
|
| T |
30806459 |
ggtagctcaattgatttgaaccaagagataaggagttggaggtttttagtttaaattcggacaaaaaagaaaaactaatctaacaacgaatttttaacat |
30806360 |
T |
|
| Q |
208 |
ttg |
210 |
Q |
| |
|
||| |
|
|
| T |
30806359 |
ttg |
30806357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 41594107 - 41594041
Alignment:
| Q |
110 |
tagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggag |
176 |
Q |
| |
|
|||||||| ||||||| |||||||| |||| |||||||||| |||||||||||||| ||||| |||| |
|
|
| T |
41594107 |
tagctcaactggtttgtgctaagggttaagaagttggaggtactgggttcaaacccagacaagggag |
41594041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 157
Target Start/End: Complemental strand, 5251942 - 5251890
Alignment:
| Q |
105 |
ttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggt |
157 |
Q |
| |
|
||||||||||||| |||||||||| |||||| |||||||||||||| |||||| |
|
|
| T |
5251942 |
ttgggtagctcaactggtttgagccaagggaaaaggagttggaggtcctgggt |
5251890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 167
Target Start/End: Original strand, 9524640 - 9524703
Alignment:
| Q |
101 |
ggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccgg |
167 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| | ||||||||| |||| |||||||||||||||| |
|
|
| T |
9524640 |
ggggttgggtaactcaagtggtttgagctaaagaataaggagt---aggtcctgggttcaaacccgg |
9524703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 18838373 - 18838453
Alignment:
| Q |
135 |
ataaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatctagcaactaattactaacatttgccatt |
215 |
Q |
| |
|
|||| ||||||||| |||||| || || ||||||||| ||||||||||| |||| |||||||||||||||||| |||| |
|
|
| T |
18838373 |
ataaagagttggagattctggttttcaatccggacaaatgagaaaaactattctaattactaattactaacatttgtcatt |
18838453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 25520217 - 25520295
Alignment:
| Q |
139 |
ggagttggaggttctgggttcaaacccggacaaaggag--aaaaactaatctagcaactaattactaacatttgccatt |
215 |
Q |
| |
|
|||||||||||| |||||||| ||||| ||| || ||| ||||||||||||| | || ||||| |||||||||||||| |
|
|
| T |
25520217 |
ggagttggaggtcctgggttccaacccagacgaatgagaaaaaaactaatctaaccaccaattattaacatttgccatt |
25520295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 51285241 - 51285194
Alignment:
| Q |
103 |
ggttgggtagctcaattggtttgagctaagggataaggagttggaggt |
150 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||| || |||||||| |
|
|
| T |
51285241 |
ggttgggtagctcaactagtttgagctaagggataatgaattggaggt |
51285194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 64; Significance: 1e-27; HSPs: 15)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 100 - 215
Target Start/End: Complemental strand, 8790085 - 8789970
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatctagcaactaatt |
199 |
Q |
| |
|
|||||||||| ||||||| ||||||||||||||||| | ||||||||||| |||||||||||||| ||||| ||||| ||||||||||| |||||| | |
|
|
| T |
8790085 |
gggggttgggcagctcaactggtttgagctaagggacacagagttggaggtcctgggttcaaacccagacaacggagacaaactaatctaataactaact |
8789986 |
T |
|
| Q |
200 |
actaacatttgccatt |
215 |
Q |
| |
|
|| ||||||||||||| |
|
|
| T |
8789985 |
acaaacatttgccatt |
8789970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 98 - 198
Target Start/End: Complemental strand, 28590458 - 28590355
Alignment:
| Q |
98 |
atgggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggaga---aaaactaatctagcaac |
194 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||||||||| |||| ||||||||| ||| |||||||||||||||||||||| |||||||||||| |||| |
|
|
| T |
28590458 |
atgggggttgggtaactcaactggtttgagctaagggacaaggtgttggaggtcctgagttcaaacccggacaaaggagaaaaaaaactaatctaacaac |
28590359 |
T |
|
| Q |
195 |
taat |
198 |
Q |
| |
|
|||| |
|
|
| T |
28590358 |
taat |
28590355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 119 - 215
Target Start/End: Complemental strand, 50574841 - 50574742
Alignment:
| Q |
119 |
tggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggaga---aaaactaatctagcaactaattactaacatttgccatt |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| ||||||| | ||||||| |||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
50574841 |
tggtttgagctaagggataaggagttggaggtcctgggttgaaacccgaatgaaggagaaaaaaaactaatctaacaactaattactaacatttgccatt |
50574742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 51569819 - 51569883
Alignment:
| Q |
114 |
tcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaa |
178 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||| |
|
|
| T |
51569819 |
tcaattggtttgagctaagggaaaaggagttggaggttctgggttcaaactcggacgaaggagaa |
51569883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 215
Target Start/End: Complemental strand, 23768841 - 23768730
Alignment:
| Q |
104 |
gttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatctagcaactaattacta |
203 |
Q |
| |
|
||||||| | ||||| ||||||||||| |||| ||| ||||||||||||| |||| |||| ||||| || |||||||| | ||| | ||||||||||||| |
|
|
| T |
23768841 |
gttgggtggatcaataggtttgagctatgggaaaagaagttggaggttcttggtttaaacgcggacgaaagagaaaaattgatcgaacaactaattacta |
23768742 |
T |
|
| Q |
204 |
acatttgccatt |
215 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
23768741 |
acctttgccatt |
23768730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 122 - 215
Target Start/End: Complemental strand, 46578191 - 46578095
Alignment:
| Q |
122 |
tttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggaga---aaaactaatctagcaactaattactaacatttgccatt |
215 |
Q |
| |
|
||||| |||||| ||||| ||||||| || || |||||||||| |||||||||||| |||||||| | | ||||||||||||||||||||||||| |
|
|
| T |
46578191 |
tttgaactaaggaataagaagttggaagtccttggttcaaacctggacaaaggagaaaaaaaactaaccaaacaactaattactaacatttgccatt |
46578095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 42529433 - 42529493
Alignment:
| Q |
103 |
ggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaac |
163 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
42529433 |
ggttgggtagctcagctggtttgagctaagggataaggagttggaggtcatgagttcaaac |
42529493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 37897583 - 37897660
Alignment:
| Q |
99 |
tgggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggag |
176 |
Q |
| |
|
||||| ||||||||||||| ||| ||| ||| | |||||| ||||||||||| |||||||||||||| ||||| |||| |
|
|
| T |
37897583 |
tggggattgggtagctcaactggattgggctgaaggataaagagttggaggtcctgggttcaaacccagacaagggag |
37897660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 46323360 - 46323265
Alignment:
| Q |
99 |
tgggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatctagcaact |
195 |
Q |
| |
|
||||| ||||||||||||||||| ||||| ||| | |||| ||||| ||| | || |||||||| ||||| ||||| ||||||||||||||||||| |
|
|
| T |
46323360 |
tggggtttgggtagctcaattgggttgagttaaagaataaagagttagagatcatgtgttcaaactcggac-aaggaaaaaaactaatctagcaact |
46323265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 188
Target Start/End: Complemental strand, 8916737 - 8916651
Alignment:
| Q |
102 |
gggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatct |
188 |
Q |
| |
|
||||||| || ||||| |||||||||| | |||||| ||||| ||||| |||||||||||| || ||||||||||||||||||| |
|
|
| T |
8916737 |
gggttggataactcaactggtttgagccagaggataaagagtttgaggtcatgggttcaaacctagataaaggagaaaaactaatct |
8916651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 54135695 - 54135760
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaaccc |
165 |
Q |
| |
|
||||||||||||||| | || ||||||||||| || ||||| |||||||| |||||||||||||| |
|
|
| T |
54135695 |
gggggttgggtagctttaatgatttgagctaagagaaaaggaattggaggtcctgggttcaaaccc |
54135760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 101 - 163
Target Start/End: Complemental strand, 28409521 - 28409459
Alignment:
| Q |
101 |
ggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaac |
163 |
Q |
| |
|
||||||||||| ||||| ||| ||||||||||||| | ||||||||||| | |||||||||| |
|
|
| T |
28409521 |
ggggttgggtaactcaactgggttgagctaagggaagatgagttggaggtcccgggttcaaac |
28409459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 15328188 - 15328152
Alignment:
| Q |
114 |
tcaattggtttgagctaagggataaggagttggaggt |
150 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
15328188 |
tcaattggtttgagttaaggaataaggagttggaggt |
15328152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 21498496 - 21498456
Alignment:
| Q |
110 |
tagctcaattggtttgagctaagggataaggagttggaggt |
150 |
Q |
| |
|
|||||||| | |||||||||||||||||| ||||||||||| |
|
|
| T |
21498496 |
tagctcaactagtttgagctaagggataacgagttggaggt |
21498456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 40111727 - 40111795
Alignment:
| Q |
143 |
ttggaggttctgggttcaaacccggacaaaggagaaaaact-aatctagcaactaattactaacatttg |
210 |
Q |
| |
|
||||||||| ||| | ||||| ||||||||||||||| | |||||| |||||||||||||||||||| |
|
|
| T |
40111727 |
ttggaggttatggatccaaacatggacaaaggagaaaactttaatctaacaactaattactaacatttg |
40111795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 61; Significance: 6e-26; HSPs: 19)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 105 - 208
Target Start/End: Original strand, 12136496 - 12136600
Alignment:
| Q |
105 |
ttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggag-aaaaactaatctagcaactaattacta |
203 |
Q |
| |
|
||||||| ||||| ||||||||||||||| ||||| |||||||||| ||||||||||| |||||||||||| ||||||||||| | ||||||||||||| |
|
|
| T |
12136496 |
ttgggtaactcaactggtttgagctaaggaataagaagttggaggtactgggttcaaagtcggacaaaggagtaaaaactaatcaaacaactaattacta |
12136595 |
T |
|
| Q |
204 |
acatt |
208 |
Q |
| |
|
||||| |
|
|
| T |
12136596 |
acatt |
12136600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 100 - 215
Target Start/End: Complemental strand, 16622710 - 16622593
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggataaggagt----tggaggttctgggttcaaacccggacaaaggagaaaaactaatctagcaact |
195 |
Q |
| |
|
|||||||| ||||||||| || |||||||||||||||| |||| ||||||| |||||||||||| |||| |||||||||||||||||||| ||||| |
|
|
| T |
16622710 |
gggggttgagtagctcaactgatttgagctaagggata--gagttggatggaggtcctgggttcaaactcggataaaggagaaaaactaatctaacaact |
16622613 |
T |
|
| Q |
196 |
aattactaacatttgccatt |
215 |
Q |
| |
|
||||||||||||||| |||| |
|
|
| T |
16622612 |
aattactaacatttgtcatt |
16622593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 100 - 203
Target Start/End: Complemental strand, 34453840 - 34453736
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggaga-aaaactaatctagcaactaat |
198 |
Q |
| |
|
|||||||||||||| ||| || | |||| ||||||||||||||| |||||| |||| |||||||||||||||||||| |||||||||||| |||||||| |
|
|
| T |
34453840 |
gggggttgggtagcacaactgatatgagttaagggataaggagtaggaggtcatgggatcaaacccggacaaaggagaaaaaactaatctaacaactaat |
34453741 |
T |
|
| Q |
199 |
tacta |
203 |
Q |
| |
|
||||| |
|
|
| T |
34453740 |
tacta |
34453736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 36665347 - 36665235
Alignment:
| Q |
101 |
ggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaagg-agaaaaactaatctagcaactaatt |
199 |
Q |
| |
|
|||||||||||||| || |||||||||||||||| |||| || ||| | | ||||||||||||||||||||||| | ||| | ||||||| ||||||| | |
|
|
| T |
36665347 |
ggggttgggtagcttaactggtttgagctaagggttaagtagatggggatactgggttcaaacccggacaaaggaataaatattaatctaacaactaact |
36665248 |
T |
|
| Q |
200 |
actaacatttgcc |
212 |
Q |
| |
|
|||||||| |||| |
|
|
| T |
36665247 |
actaacatgtgcc |
36665235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 210
Target Start/End: Original strand, 18069278 - 18069385
Alignment:
| Q |
104 |
gttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggag-aaaaactaatctagcaactaattact |
202 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||||||||| |||| | ||||||||| ||||||||| || ||| | || || | |||||||||||| |
|
|
| T |
18069278 |
gttgggtagctcaattgatttgagttaagggataaggagttgaaggtcataggttcaaactcggacaaagtagtaaatattattccaacaactaattact |
18069377 |
T |
|
| Q |
203 |
aacatttg |
210 |
Q |
| |
|
|||||||| |
|
|
| T |
18069378 |
aacatttg |
18069385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 14239333 - 14239266
Alignment:
| Q |
102 |
gggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggac |
169 |
Q |
| |
|
|||||||||||||||| |||| ||||||| ||||||||||||||||||| ||||||| ||||| |||| |
|
|
| T |
14239333 |
gggttgggtagctcaactggtctgagctaggggataaggagttggaggtcctgggtttaaacctggac |
14239266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 100 - 142
Target Start/End: Original strand, 10995345 - 10995387
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggataaggag |
142 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
10995345 |
gggggttgggtagctcaattggtttgagccaagggataaggag |
10995387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 119 - 165
Target Start/End: Original strand, 12020073 - 12020119
Alignment:
| Q |
119 |
tggtttgagctaagggataaggagttggaggttctgggttcaaaccc |
165 |
Q |
| |
|
||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
12020073 |
tggtttgagttaagggataaggagttggaggtcctgggttcaaaccc |
12020119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 5431627 - 5431690
Alignment:
| Q |
104 |
gttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccgga |
168 |
Q |
| |
|
||||||||||||| || |||||||||||||||||||||||||||| |||| |||||||| |||| |
|
|
| T |
5431627 |
gttgggtagctcagctgatttgagctaagggataaggagttggagg-tctgagttcaaactcgga |
5431690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 20472382 - 20472445
Alignment:
| Q |
100 |
gggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaac |
163 |
Q |
| |
|
||||||||||||| |||| | ||||||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
20472382 |
gggggttgggtagttcaactactttgagctaagggataaagagttggagactctgggttcaaac |
20472445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 107 - 206
Target Start/End: Original strand, 24289172 - 24289276
Alignment:
| Q |
107 |
gggtagctcaattggtttgagctaag----ggataaggagttggaggttctgggttcaaacccggacaaaggag-aaaaactaatctagcaactaattac |
201 |
Q |
| |
|
|||||| |||| |||||||||||||| ||| ||||||||||||| ||||||||||||||| || |||||| ||||||||| || ||||||| ||| |
|
|
| T |
24289172 |
gggtagttcaactggtttgagctaagtaagggacaaggagttggaggacctgggttcaaacccgaacgaaggagaaaaaactaacataacaactaactac |
24289271 |
T |
|
| Q |
202 |
taaca |
206 |
Q |
| |
|
||||| |
|
|
| T |
24289272 |
taaca |
24289276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 39652947 - 39652888
Alignment:
| Q |
157 |
ttcaaacccggacaaagga-gaaaaactaatctagcaactaattactaacatttgccatt |
215 |
Q |
| |
|
||||||||||||||||||| |||||| ||||||||||| ||| |||||||||||||||| |
|
|
| T |
39652947 |
ttcaaacccggacaaaggaagaaaaattaatctagcaattaaccactaacatttgccatt |
39652888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 26055447 - 26055561
Alignment:
| Q |
102 |
gggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggag-aaaaactaatctagcaactaatta |
200 |
Q |
| |
|
|||||||||| |||| ||||||| | |||||||||||||||||||||| ||||||||||| | | || ||| ||| | ||||||| ||||||||| |
|
|
| T |
26055447 |
gggttgggtatttcaactggtttgtgataagggataaggagttggaggtcatgggttcaaacttgaatgaaagagtaaatattaatctaataactaatta |
26055546 |
T |
|
| Q |
201 |
ctaacatttgccatt |
215 |
Q |
| |
|
||||||||| ||||| |
|
|
| T |
26055547 |
ctaacatttaccatt |
26055561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 162
Target Start/End: Original strand, 10412983 - 10413026
Alignment:
| Q |
119 |
tggtttgagctaagggataaggagttggaggttctgggttcaaa |
162 |
Q |
| |
|
||||||||||||| |||||||||||| ||||||||| ||||||| |
|
|
| T |
10412983 |
tggtttgagctaatggataaggagttagaggttctgagttcaaa |
10413026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 26651113 - 26651163
Alignment:
| Q |
139 |
ggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatcta |
189 |
Q |
| |
|
|||||| ||||||||| ||| |||||||||| ||||||||||| ||||||| |
|
|
| T |
26651113 |
ggagtttgaggttctgagtttaaacccggacgaaggagaaaaattaatcta |
26651163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 144
Target Start/End: Complemental strand, 36772864 - 36772822
Alignment:
| Q |
102 |
gggttgggtagctcaattggtttgagctaagggataaggagtt |
144 |
Q |
| |
|
|||||||||||||||| | |||||||||||| ||||||||||| |
|
|
| T |
36772864 |
gggttgggtagctcaactagtttgagctaagagataaggagtt |
36772822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 14768157 - 14768193
Alignment:
| Q |
114 |
tcaattggtttgagctaagggataaggagttggaggt |
150 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
14768157 |
tcaattggtttgagttaaggaataaggagttggaggt |
14768193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 14770860 - 14770896
Alignment:
| Q |
114 |
tcaattggtttgagctaagggataaggagttggaggt |
150 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
14770860 |
tcaattggtttgagttaaggaataaggagttggaggt |
14770896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 30005693 - 30005737
Alignment:
| Q |
102 |
gggttgggtagctcaattggtttgagctaagggataaggagttgg |
146 |
Q |
| |
|
||||||||||||| ||||||||||||| ||||| |||| |||||| |
|
|
| T |
30005693 |
gggttgggtagcttaattggtttgagccaagggttaagtagttgg |
30005737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0036
Description:
Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 119 - 215
Target Start/End: Original strand, 20888 - 20986
Alignment:
| Q |
119 |
tggtttgagctaagggataaggagttggaggttctgggttcaaacccggacaaaggagaaaaactaatctagcaact--aattactaacatttgccatt |
215 |
Q |
| |
|
|||||||| |||| |||||| ||||| ||||||| |||| |||| ||||| |||||||||||||||||| |||| | |||||||||||||||||| |
|
|
| T |
20888 |
tggtttgaattaagagataagaagttgaaggttctcggtttaaacatggacagaggagaaaaactaatctaataactacacttactaacatttgccatt |
20986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0160 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0160
Description:
Target: scaffold0160; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 29546 - 29606
Alignment:
| Q |
156 |
gttcaaacccggacaaaggagaaaaa-ctaatctagcaactaattactaacatttgccatt |
215 |
Q |
| |
|
|||| ||||||||| ||||||||||| |||| ||| ||||||||||||| ||||||||||| |
|
|
| T |
29546 |
gttccaacccggacgaaggagaaaaaactaaactaacaactaattactagcatttgccatt |
29606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University