View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21681_high_1 (Length: 498)

Name: NF21681_high_1
Description: NF21681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21681_high_1
NF21681_high_1
[»] chr3 (33 HSPs)
chr3 (30-259)||(34899746-34899975)
chr3 (317-415)||(6716392-6716490)
chr3 (317-415)||(6718576-6718674)
chr3 (317-415)||(54635017-54635115)
chr3 (322-415)||(4600927-4601019)
chr3 (317-415)||(3617342-3617439)
chr3 (317-415)||(45282875-45282973)
chr3 (322-415)||(4598706-4598798)
chr3 (322-415)||(10209068-10209160)
chr3 (322-415)||(10211288-10211380)
chr3 (322-415)||(25637321-25637413)
chr3 (322-415)||(10056112-10056204)
chr3 (322-415)||(10058334-10058426)
chr3 (322-415)||(10060556-10060648)
chr3 (322-415)||(10062778-10062870)
chr3 (322-415)||(10065000-10065092)
chr3 (322-415)||(10067222-10067314)
chr3 (317-415)||(800983-801081)
chr3 (317-415)||(23200322-23200420)
chr3 (317-415)||(23198123-23198221)
chr3 (351-415)||(9636347-9636410)
chr3 (317-415)||(5258330-5258427)
chr3 (440-498)||(54634934-54634992)
chr3 (317-415)||(5260509-5260606)
chr3 (440-479)||(45282809-45282848)
chr3 (440-479)||(6716328-6716367)
chr3 (440-479)||(6718512-6718551)
chr3 (317-415)||(45095050-45095147)
chr3 (365-415)||(7782375-7782424)
chr3 (331-415)||(39153561-39153644)
chr3 (351-415)||(7762151-7762213)
chr3 (351-415)||(32744647-32744709)
chr3 (351-415)||(37408344-37408406)
[»] chr7 (22 HSPs)
chr7 (317-415)||(24789733-24789831)
chr7 (317-415)||(20343789-20343887)
chr7 (322-415)||(6592522-6592614)
chr7 (322-415)||(6594740-6594832)
chr7 (322-415)||(18388942-18389034)
chr7 (322-415)||(18392378-18392470)
chr7 (322-415)||(1562186-1562278)
chr7 (317-415)||(32060503-32060600)
chr7 (317-415)||(43504333-43504431)
chr7 (317-415)||(48408687-48408785)
chr7 (317-415)||(39731261-39731359)
chr7 (317-415)||(24514946-24515043)
chr7 (357-415)||(25767180-25767237)
chr7 (317-415)||(4178660-4178757)
chr7 (351-415)||(1113542-1113604)
chr7 (317-415)||(29990940-29991037)
chr7 (440-479)||(20343723-20343762)
chr7 (317-411)||(35853804-35853897)
chr7 (440-487)||(2058322-2058371)
chr7 (447-498)||(24789650-24789703)
chr7 (331-415)||(38671422-38671505)
chr7 (347-415)||(30024949-30025015)
[»] chr5 (24 HSPs)
chr5 (317-415)||(29720256-29720354)
chr5 (317-415)||(29722416-29722514)
chr5 (317-415)||(29751338-29751436)
chr5 (322-415)||(16544302-16544394)
chr5 (322-415)||(16546524-16546616)
chr5 (322-415)||(22536470-22536563)
chr5 (317-415)||(25078013-25078110)
chr5 (317-415)||(25135982-25136079)
chr5 (322-415)||(40379985-40380077)
chr5 (322-415)||(40382196-40382288)
chr5 (317-415)||(10593151-10593248)
chr5 (317-415)||(9789402-9789500)
chr5 (317-415)||(18441826-18441924)
chr5 (317-415)||(16409367-16409465)
chr5 (317-415)||(26177775-26177873)
chr5 (317-415)||(26170666-26170764)
chr5 (317-415)||(36074230-36074327)
chr5 (317-415)||(13342946-13343043)
chr5 (440-479)||(22536590-22536629)
chr5 (317-415)||(30182474-30182571)
chr5 (331-415)||(13488088-13488171)
chr5 (317-415)||(25412647-25412744)
chr5 (331-415)||(28750855-28750938)
chr5 (351-415)||(31182858-31182920)
[»] chr2 (13 HSPs)
chr2 (317-415)||(6266583-6266681)
chr2 (322-415)||(12647568-12647660)
chr2 (317-415)||(32289457-32289555)
chr2 (331-415)||(4484530-4484614)
chr2 (317-415)||(36205849-36205946)
chr2 (351-415)||(30833230-30833293)
chr2 (317-415)||(4503318-4503415)
chr2 (317-415)||(45099640-45099737)
chr2 (317-415)||(5723440-5723537)
chr2 (317-415)||(36988261-36988358)
chr2 (331-415)||(11151791-11151874)
chr2 (331-415)||(39284770-39284853)
chr2 (331-415)||(42362237-42362320)
[»] chr1 (16 HSPs)
chr1 (317-415)||(9987094-9987192)
chr1 (317-415)||(40282269-40282367)
chr1 (309-415)||(20622408-20622514)
chr1 (317-415)||(21053850-21053948)
chr1 (322-415)||(44203526-44203618)
chr1 (317-415)||(9036310-9036407)
chr1 (331-415)||(51765280-51765363)
chr1 (317-415)||(20762557-20762654)
chr1 (331-415)||(13316518-13316601)
chr1 (313-415)||(3189216-3189317)
chr1 (313-415)||(3198033-3198134)
chr1 (313-415)||(3206872-3206973)
chr1 (440-479)||(9036246-9036285)
chr1 (331-415)||(31659123-31659206)
chr1 (351-415)||(28220447-28220509)
chr1 (351-415)||(28223642-28223704)
[»] chr8 (17 HSPs)
chr8 (317-415)||(3439396-3439494)
chr8 (317-415)||(25689847-25689945)
chr8 (322-415)||(15290417-15290509)
chr8 (322-415)||(15470786-15470878)
chr8 (322-415)||(42575507-42575599)
chr8 (317-415)||(2627627-2627725)
chr8 (317-415)||(17982538-17982635)
chr8 (317-415)||(31218142-31218239)
chr8 (317-415)||(34254515-34254611)
chr8 (331-415)||(34256705-34256787)
chr8 (317-415)||(1746404-1746501)
chr8 (440-479)||(3439330-3439369)
chr8 (317-415)||(19945546-19945643)
chr8 (317-415)||(44303739-44303836)
chr8 (331-415)||(10929686-10929767)
chr8 (331-415)||(43036308-43036391)
chr8 (351-415)||(30143227-30143289)
[»] chr6 (26 HSPs)
chr6 (322-415)||(27647755-27647848)
chr6 (322-415)||(6027141-6027233)
chr6 (322-415)||(33342288-33342380)
chr6 (317-415)||(25421198-25421295)
chr6 (317-415)||(16554762-16554859)
chr6 (317-415)||(16631318-16631415)
chr6 (322-415)||(34164751-34164843)
chr6 (322-415)||(34166973-34167065)
chr6 (317-408)||(16653012-16653102)
chr6 (317-415)||(16578696-16578793)
chr6 (317-415)||(16616587-16616684)
chr6 (317-415)||(411994-412091)
chr6 (317-415)||(3072938-3073036)
chr6 (317-415)||(6097618-6097717)
chr6 (317-415)||(2171716-2171814)
chr6 (317-415)||(31404859-31404957)
chr6 (317-415)||(16452515-16452612)
chr6 (317-415)||(5406384-5406481)
chr6 (317-415)||(5410709-5410806)
chr6 (440-479)||(16554697-16554736)
chr6 (440-479)||(16631253-16631292)
chr6 (440-479)||(16652940-16652979)
chr6 (333-415)||(30834738-30834819)
chr6 (440-478)||(27647692-27647730)
chr6 (351-415)||(5413613-5413675)
chr6 (441-498)||(5674453-5674512)
[»] scaffold0674 (1 HSPs)
scaffold0674 (322-415)||(3908-4000)
[»] scaffold0565 (1 HSPs)
scaffold0565 (322-415)||(2786-2878)
[»] scaffold0137 (1 HSPs)
scaffold0137 (322-415)||(6167-6259)
[»] chr4 (17 HSPs)
chr4 (322-415)||(8395498-8395590)
chr4 (317-415)||(7122575-7122672)
chr4 (317-415)||(7124794-7124891)
chr4 (322-415)||(5138183-5138275)
chr4 (322-413)||(8393291-8393381)
chr4 (322-415)||(5135957-5136050)
chr4 (317-415)||(31495495-31495593)
chr4 (317-415)||(13992471-13992569)
chr4 (440-479)||(8393225-8393264)
chr4 (440-479)||(8395434-8395473)
chr4 (331-415)||(5429564-5429647)
chr4 (313-415)||(9927639-9927740)
chr4 (318-415)||(29999992-30000088)
chr4 (313-415)||(37740511-37740612)
chr4 (331-415)||(48142927-48143010)
chr4 (331-415)||(52082857-52082940)
chr4 (351-415)||(52093885-52093947)
[»] scaffold0002 (1 HSPs)
scaffold0002 (317-415)||(434418-434515)
[»] scaffold0286 (1 HSPs)
scaffold0286 (357-415)||(22229-22286)
[»] scaffold0491 (2 HSPs)
scaffold0491 (331-415)||(11361-11445)
scaffold0491 (351-415)||(8956-9019)
[»] scaffold1519 (1 HSPs)
scaffold1519 (317-415)||(802-899)


Alignment Details
Target: chr3 (Bit Score: 230; Significance: 1e-127; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 30 - 259
Target Start/End: Complemental strand, 34899975 - 34899746
Alignment:
Q  30 atctcaacttgaaagttgaaactaccaaactttacctatatgcatataaacacatctctctttagttcttctctcgctatttgatgtcaacaaaagctaa 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34899975 atctcaacttgaaagttgaaactaccaaactttacctatatgcatataaacacatctctctttagttcttctctcgctatttgatgtcaacaaaagctaa 34899876  T
Q  130 attgtgtcttcccctgcgtgtatgcaaccttatagtctcaaaattttccttccattctcaccaaacatgaaaggtatgtatcttccaactacaaaatttt 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34899875 attgtgtcttcccctgcgtgtatgcaaccttatagtctcaaaattttccttccattctcaccaaacatgaaaggtatgtatcttccaactacaaaatttt 34899776  T
Q  230 atgtgaatttgtgcagatgatatcactgac 259  Q
    ||||||||||||||||||||||||||||||    
T  34899775 atgtgaatttgtgcagatgatatcactgac 34899746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 6716490 - 6716392
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6716490 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttactccctttgatttcccaag 6716392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 6718674 - 6718576
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6718674 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttactccctttgatttcccaag 6718576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 54635115 - 54635017
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  54635115 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaag 54635017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 322 - 415
Target Start/End: Original strand, 4600927 - 4601019
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  4600927 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagctt-tccctttgatttcccaag 4601019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 3617439 - 3617342
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  3617439 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 3617342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 45282973 - 45282875
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  45282973 tgattctctctttgcaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgattccccaag 45282875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 322 - 415
Target Start/End: Original strand, 4598706 - 4598798
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  4598706 ttctctctacagggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagctt-tccctttgatttcccaag 4598798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 10209160 - 10209068
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  10209160 ttctctctacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaaccctagagctt-tccctttgatttcccaag 10209068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 10211380 - 10211288
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  10211380 ttctctctacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaaccctagagctt-tccctttgatttcccaag 10211288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 25637413 - 25637321
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||    
T  25637413 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagatac-ccctttgatttcccaag 25637321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 10056204 - 10056112
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  10056204 ttctctctacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaactctagagcttc-ccctttgatttcccaag 10056112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 10058426 - 10058334
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  10058426 ttctctctacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaactctagagcttc-ccctttgatttcccaag 10058334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 10060648 - 10060556
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  10060648 ttctctctacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaactctagagcttc-ccctttgatttcccaag 10060556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 10062870 - 10062778
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  10062870 ttctctctacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaactctagagcttc-ccctttgatttcccaag 10062778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 10065092 - 10065000
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  10065092 ttctctctacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaactctagagcttc-ccctttgatttcccaag 10065000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 10067314 - 10067222
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  10067314 ttctctctacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaactctagagcttc-ccctttgatttcccaag 10067222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 801081 - 800983
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||||||||||| ||||||||||||||||||| | |||||||||||  ||||||||||||| | |||||||||||||||||| ||||||||||||||||    
T  801081 tgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaaga-ctctaaaccctagagtttcttcctttgatttcccaag 800983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 23200322 - 23200420
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| | ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  23200322 tgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaaactctaatcaaaga-ccctaaaccctagagttgctccctttgatttcccaag 23200420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 23198123 - 23198221
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| | ||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |||||    
T  23198123 tgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaaactctaatcaaaga-ccctaaaccctagagttgctccctttgattttccaag 23198221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 351 - 415
Target Start/End: Original strand, 9636347 - 9636410
Alignment:
Q  351 caacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||| |||||||||||||| |||||||||||| ||||||| ||||||||||||||||    
T  9636347 caacccaagagagactctaatcaaaga-ccctaaaccctaaagtttcttcctttgatttcccaag 9636410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 5258330 - 5258427
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||| ||||    
T  5258330 tgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagtttctccctttgatttctcaag 5258427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 54634992 - 54634934
Alignment:
Q  440 tcaaatctgcacaagaacactttatactagcctccctctgaagcaatcacgtcacgatt 498  Q
    ||||||||||||||||||||||||||||||||| ||||||  ||||||  |||||||||    
T  54634992 tcaaatctgcacaagaacactttatactagccttcctctgttgcaatcgtgtcacgatt 54634934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 5260509 - 5260606
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| |||| |  ||||||||||||||||    
T  5260509 tgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcctcctttgatttcccaag 5260606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 440 - 479
Target Start/End: Complemental strand, 45282848 - 45282809
Alignment:
Q  440 tcaaatctgcacaagaacactttatactagcctccctctg 479  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  45282848 tcaaatctgcacaagaacactttatactagccttcctctg 45282809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 479
Target Start/End: Complemental strand, 6716367 - 6716328
Alignment:
Q  440 tcaaatctgcacaagaacactttatactagcctccctctg 479  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  6716367 tcaaatctgcacaagaacactttatactagtcttcctctg 6716328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 479
Target Start/End: Complemental strand, 6718551 - 6718512
Alignment:
Q  440 tcaaatctgcacaagaacactttatactagcctccctctg 479  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  6718551 tcaaatctgcacaagaacactttatactagtcttcctctg 6718512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 45095147 - 45095050
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| |||| |  | ||||||||||||||    
T  45095147 tgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcctcttttgatttcccaag 45095050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 415
Target Start/End: Original strand, 7782375 - 7782424
Alignment:
Q  365 ctctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||||||||||| | ||||| ||||||||| |||||||||||||||||||    
T  7782375 ctctaatcaaaga-ctctaaaacctagagttactccctttgatttcccaag 7782424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 415
Target Start/End: Original strand, 39153561 - 39153644
Alignment:
Q  331 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||||||||    
T  39153561 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaag 39153644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 415
Target Start/End: Complemental strand, 7762213 - 7762151
Alignment:
Q  351 caacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||||||||    
T  7762213 caacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaag 7762151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 415
Target Start/End: Original strand, 32744647 - 32744709
Alignment:
Q  351 caacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||||||||    
T  32744647 caacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaag 32744709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 415
Target Start/End: Complemental strand, 37408406 - 37408344
Alignment:
Q  351 caacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||| |||||||||||||| || ||||||||| |||| |  ||||||||||||||||    
T  37408406 caacccaagaga-actctaatcaaaga-ccataaaccctaaagttgcctcctttgatttcccaag 37408344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 3e-46; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 24789831 - 24789733
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24789831 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaag 24789733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 20343887 - 20343789
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  20343887 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgattccccaag 20343789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 322 - 415
Target Start/End: Original strand, 6592522 - 6592614
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  6592522 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 6592614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 322 - 415
Target Start/End: Original strand, 6594740 - 6594832
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  6594740 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 6594832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 322 - 415
Target Start/End: Original strand, 18388942 - 18389034
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  18388942 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 18389034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 322 - 415
Target Start/End: Original strand, 18392378 - 18392470
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  18392378 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 18392470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 322 - 415
Target Start/End: Original strand, 1562186 - 1562278
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||    
T  1562186 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgattccccaag 1562278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 32060503 - 32060600
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  32060503 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagctt-accctttgatttcccaag 32060600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 43504333 - 43504431
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||||||||||| ||||||||||||||||||| | || ||||||||  ||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  43504333 tgattttctctcttcaaggtgtttcccatgtttcccaagccaagagaagctctaatcaaaga-ctctaaaccctagagtttctccctttgatttcccaag 43504431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 48408785 - 48408687
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| | ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  48408785 tgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaaactctaatcaaaga-ccctaaaccctagagttgctccctttgatttcccaag 48408687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 39731359 - 39731261
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| | |||||||||||  ||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  39731359 tgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaagctctaatcaaaga-ccctaaaccctagagttactccctttgatttcccaag 39731261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 24514946 - 24515043
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| |||| || ||||||||||||||||    
T  24514946 tgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcttcctttgatttcccaag 24515043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 357 - 415
Target Start/End: Original strand, 25767180 - 25767237
Alignment:
Q  357 aagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||| |||||||||||||| ||||||||||||||||| |||||||||||||| ||||    
T  25767180 aagagaaactctaatcaaaga-ccctaaaccctagagttgctccctttgatttctcaag 25767237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 4178757 - 4178660
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| |||| || ||||||||||| ||||    
T  4178757 tgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcttcctttgatttctcaag 4178660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 415
Target Start/End: Complemental strand, 1113604 - 1113542
Alignment:
Q  351 caacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||| |||||||||||||| |||| ||||||| |||| || ||||||||||||||||    
T  1113604 caacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacttcctttgatttcccaag 1113542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 29991037 - 29990940
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtt-tctccctttgatttcccaa 414  Q
    |||||||| |||  |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| |||| ||||| |||||||||||||    
T  29991037 tgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgtctcc-tttgatttcccaa 29990941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 479
Target Start/End: Complemental strand, 20343762 - 20343723
Alignment:
Q  440 tcaaatctgcacaagaacactttatactagcctccctctg 479  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  20343762 tcaaatctgcacaagaacactttatactagtcttcctctg 20343723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 411
Target Start/End: Complemental strand, 35853897 - 35853804
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcc 411  Q
    |||||||| |||  |||||||||| | |||||| | ||||||||||| |||| ||||||||| |||||||||||| |||| || ||||||||||||    
T  35853897 tgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actcaaatcaaaga-ccctaaaccctaaagttgctacctttgatttcc 35853804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 440 - 487
Target Start/End: Original strand, 2058322 - 2058371
Alignment:
Q  440 tcaaatctgcacaagaacac--tttatactagcctccctctgaagcaatc 487  Q
    ||||||||||||||||||||  | ||||||||||| ||||||||||||||    
T  2058322 tcaaatctgcacaagaacacaatatatactagccttcctctgaagcaatc 2058371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 447 - 498
Target Start/End: Complemental strand, 24789703 - 24789650
Alignment:
Q  447 tgcacaagaacactttata--ctagcctccctctgaagcaatcacgtcacgatt 498  Q
    |||||||||||||||||||  ||||||| ||||||||||||||  |||||||||    
T  24789703 tgcacaagaacactttatatactagccttcctctgaagcaatcgtgtcacgatt 24789650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 415
Target Start/End: Original strand, 38671422 - 38671505
Alignment:
Q  331 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||||||||    
T  38671422 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaag 38671505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 415
Target Start/End: Original strand, 30024949 - 30025015
Alignment:
Q  347 ttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||||||| |||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||||||||    
T  30024949 ttttcaacctaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaag 30025015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 3e-46; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 29720354 - 29720256
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29720354 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaag 29720256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 29722514 - 29722416
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29722514 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaag 29722416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 29751338 - 29751436
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29751338 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaag 29751436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 16544394 - 16544302
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  16544394 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 16544302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 16546616 - 16546524
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  16546616 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 16546524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 322 - 415
Target Start/End: Original strand, 22536470 - 22536563
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22536470 ttctctctgcagggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttctccctttgatttcccaag 22536563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 25078110 - 25078013
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  25078110 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 25078013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 25136079 - 25135982
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  25136079 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 25135982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 40380077 - 40379985
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  40380077 ttctctctacaaggtgtttcccatgttttcaacccgagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 40379985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 40382288 - 40382196
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  40382288 ttctctctacaaggtgtttcccatgttttcaacccgagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 40382196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 10593248 - 10593151
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  10593248 tgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaaccctagag-ttccccctttgatttcccaag 10593151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 9789402 - 9789500
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  ||||||||||||||||||| | |||||||||||  ||||||||||||| | ||||||||||||||| |||||||||||||||||||    
T  9789402 tgattttcactcaccaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaaga-ctctaaaccctagagttactccctttgatttcccaag 9789500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 18441826 - 18441924
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  ||||||||||||||||||| | |||||||||||  ||||||||||||| | ||||||||||||||| |||||||||||||||||||    
T  18441826 tgattttcactcaccaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaaga-ctctaaaccctagagttactccctttgatttcccaag 18441924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 16409465 - 16409367
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| |||||||| | |||||||||||  ||||||||||||| | ||||||||||||||| |||||||||||||||||||    
T  16409465 tgattttcactcaccaaggtgtttaccatgtttcccaacccaagagaagctctaatcaaaga-ctctaaaccctagagttactccctttgatttcccaag 16409367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 26177873 - 26177775
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| |||||||| | |||||||||||  ||||||||||||| | ||||||||||||||| |||||||||||||||||||    
T  26177873 tgattttcactcaccaaggtgtttaccatgtttcccaacccaagagaagctctaatcaaaga-ctctaaaccctagagttactccctttgatttcccaag 26177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 26170764 - 26170666
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| |||||||| | |||||||||||  || |||||||||| | ||||||||||||||| |||||||||||||||||||    
T  26170764 tgattttcactcaccaaggtgtttaccatgtttcccaacccaagagaagctgtaatcaaaga-ctctaaaccctagagttactccctttgatttcccaag 26170666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 36074230 - 36074327
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| |||| || ||||||||||||||||    
T  36074230 tgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcttcctttgatttcccaag 36074327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 13343043 - 13342946
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| | ||||||||||| |||||||||| ||| |||||||||||| |||| || ||||||||||||||||    
T  13343043 tgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcagaga-ccctaaaccctaaagttgcttcctttgatttcccaag 13342946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 440 - 479
Target Start/End: Original strand, 22536590 - 22536629
Alignment:
Q  440 tcaaatctgcacaagaacactttatactagcctccctctg 479  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  22536590 tcaaatctgcacaagaacactttatactagccttcctctg 22536629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 30182571 - 30182474
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||| ||||| |||| || ||||||||||||||||    
T  30182571 tgattttcactcaccaaggtgtttgcaatgtttcccaacccaagaga-actctaatcaaaga-ccctaatccctaaagttgcttcctttgatttcccaag 30182474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 331 - 415
Target Start/End: Complemental strand, 13488171 - 13488088
Alignment:
Q  331 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||| | |||||||| ||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||||||||    
T  13488171 caaggtgtttacaatgttttccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaag 13488088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 25412744 - 25412647
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| | ||||||||||| |||||||||||||| ||||||||||||  ||| |  ||||||||||||||||    
T  25412744 tgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaatgttgcctcctttgatttcccaag 25412647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 415
Target Start/End: Original strand, 28750855 - 28750938
Alignment:
Q  331 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||||||||    
T  28750855 caaggtgttttcaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaag 28750938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 415
Target Start/End: Complemental strand, 31182920 - 31182858
Alignment:
Q  351 caacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||||||||    
T  31182920 caacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaag 31182858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 3e-46; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 6266681 - 6266583
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6266681 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaag 6266583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 322 - 415
Target Start/End: Original strand, 12647568 - 12647660
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  12647568 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 12647660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 32289555 - 32289457
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaa-cccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| |||||||| ||| |||||||||  ||||||||||||| | ||||||||||||||| |||||||||||||||||||    
T  32289555 tgattttcactcaccaaggtgtttaccatgtttccaaacccaagagaagctctaatcaaaga-ctctaaaccctagagttactccctttgatttcccaag 32289457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 331 - 415
Target Start/End: Original strand, 4484530 - 4484614
Alignment:
Q  331 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||| | |||||| | |||||||||||  ||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  4484530 caaggtgtttacaatgtttcccaacccaagagaagctctaatcaaaga-ccctaaaccctagagttactccctttgatttcccaag 4484614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 36205849 - 36205946
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| |||||||| | ||||||||||| |||||||||||||| |||||||||||| |||| || ||||||||||||||||    
T  36205849 tgattttcactcaccaaggtgtttaccatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcttcctttgatttcccaag 36205946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 351 - 415
Target Start/End: Complemental strand, 30833293 - 30833230
Alignment:
Q  351 caacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||| |  ||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  30833293 caacccaagataagctctaatcaaa-aaccctaaaccctagagttactccctttgatttcccaag 30833230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 4503318 - 4503415
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| | ||||||||||| ||||||||||||||||| ||||||||| |||| || ||||||||||||||||    
T  4503318 tgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaacc-taaaccctaaagttgcttcctttgatttcccaag 4503415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 45099737 - 45099640
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| |||| || ||||||||||||||||    
T  45099737 tgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcttcctttgatttcccaag 45099640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 5723440 - 5723537
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| | ||||||||||| |||||||||||||| ||| |||||||| |||| |  ||||||||||||||||    
T  5723440 tgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagacccc-aaaccctaaagttgcctcctttgatttcccaag 5723537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 36988261 - 36988358
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||||||||    
T  36988261 tgattttcactcaccaaggtgtttactatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaag 36988358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 415
Target Start/End: Original strand, 11151791 - 11151874
Alignment:
Q  331 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||||||||    
T  11151791 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaag 11151874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 415
Target Start/End: Complemental strand, 39284853 - 39284770
Alignment:
Q  331 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||||||||    
T  39284853 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaag 39284770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 415
Target Start/End: Complemental strand, 42362320 - 42362237
Alignment:
Q  331 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||||||||    
T  42362320 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaag 42362237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 3e-46; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 9987192 - 9987094
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9987192 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaag 9987094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 40282367 - 40282269
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40282367 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaag 40282269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 309 - 415
Target Start/End: Original strand, 20622408 - 20622514
Alignment:
Q  309 acagtcagtgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatt 408  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  20622408 acagtcaatgattttccctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccatttgatt 20622507  T
Q  409 tcccaag 415  Q
    |||||||    
T  20622508 tcccaag 20622514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 21053948 - 21053850
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21053948 tgattttttctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaag 21053850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 44203618 - 44203526
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  44203618 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 44203526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 9036407 - 9036310
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  9036407 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgatttcccaag 9036310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 331 - 415
Target Start/End: Complemental strand, 51765363 - 51765280
Alignment:
Q  331 caaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||| | |||||| ||||||||||||  ||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  51765363 caaggtgtttacaatgtttccaacccaagagaagctctaatcaaaga-ccctaaaccctagagttactccctttgatttcccaag 51765280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 20762654 - 20762557
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| |||| || ||||||||||||||||    
T  20762654 tgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcttcctttgatttcccaag 20762557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 415
Target Start/End: Original strand, 13316518 - 13316601
Alignment:
Q  331 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| |||| || ||||||||||||||||    
T  13316518 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgctacctttgatttcccaag 13316601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 3189317 - 3189216
Alignment:
Q  313 tcagtgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcc 411  Q
    |||||||||||| |||  |||||||||| | |||||| | ||||||||||| ||| |||||||||| |||| ||||||| |||| |  ||||||||||||    
T  3189317 tcagtgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actttaatcaaaga-ccctcaaccctaaagttacctcctttgatttcc 3189220  T
Q  412 caag 415  Q
    ||||    
T  3189219 caag 3189216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 3198134 - 3198033
Alignment:
Q  313 tcagtgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcc 411  Q
    |||||||||||| |||  |||||||||| | |||||| | ||||||||||| ||| |||||||||| |||| ||||||| |||| |  ||||||||||||    
T  3198134 tcagtgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actttaatcaaaga-ccctcaaccctaaagttacctcctttgatttcc 3198037  T
Q  412 caag 415  Q
    ||||    
T  3198036 caag 3198033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 3206973 - 3206872
Alignment:
Q  313 tcagtgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcc 411  Q
    |||||||||||| |||  |||||||||| | |||||| | ||||||||||| ||| |||||||||| |||| ||||||| |||| |  ||||||||||||    
T  3206973 tcagtgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actttaatcaaaga-ccctcaaccctaaagttacctcctttgatttcc 3206876  T
Q  412 caag 415  Q
    ||||    
T  3206875 caag 3206872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 479
Target Start/End: Complemental strand, 9036285 - 9036246
Alignment:
Q  440 tcaaatctgcacaagaacactttatactagcctccctctg 479  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  9036285 tcaaatctgcacaagaacactttatactagtcttcctctg 9036246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 415
Target Start/End: Complemental strand, 31659206 - 31659123
Alignment:
Q  331 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||||||||    
T  31659206 caaggtgtttacaatgtttccgaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaag 31659123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 415
Target Start/End: Original strand, 28220447 - 28220509
Alignment:
Q  351 caacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||||||||    
T  28220447 caacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaag 28220509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 415
Target Start/End: Original strand, 28223642 - 28223704
Alignment:
Q  351 caacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||||||||    
T  28223642 caacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaag 28223704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 7e-44; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 3439494 - 3439396
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3439494 tgattttctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttctcaag 3439396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 25689945 - 25689847
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25689945 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttctccctttgatttcccaag 25689847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 15290509 - 15290417
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  15290509 ttctctctacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaaccctagagctt-tccctttgatttcccaag 15290417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 15470878 - 15470786
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  15470878 ttctctctacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaaccctagagctt-tccctttgatttcccaag 15470786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 322 - 415
Target Start/End: Original strand, 42575507 - 42575599
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  42575507 ttctctctacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaaccctagagctt-tccctttgatttcccaag 42575599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 2627725 - 2627627
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||||||||||| ||||||||||||||||||| | |||||||||||  ||||||||||||| | ||||||||||||||| |||||||||||||||||||    
T  2627725 tgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaaga-ctctaaaccctagagttactccctttgatttcccaag 2627627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 17982635 - 17982538
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| |||| || ||||||||||||||||    
T  17982635 tgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcttcctttgatttcccaag 17982538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 31218239 - 31218142
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| |||| || ||||||||||||||||    
T  31218239 tgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcttcctttgatttcccaag 31218142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 34254515 - 34254611
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||| | |||||||||||| |||||||||||||| |||||||||||| |||| |  ||||||||||||||||    
T  34254515 tgattttcactcaccaaggtgtttacaatgtctccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcctcctttgatttcccaag 34254611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 415
Target Start/End: Original strand, 34256705 - 34256787
Alignment:
Q  331 caaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||| | |||||| |||||||||| | |||||||||||||| |||||||||||| |||| |  ||||||||||||||||    
T  34256705 caaggtgtttacaatgtttccaacccaagata-actctaatcaaaga-ccctaaaccctaaagttgcctcctttgatttcccaag 34256787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 1746404 - 1746501
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| | |||| |||||| ||||||||||| || |||||||||||| |||| || ||||||||||||||||    
T  1746404 tgattttcactcaccaaggtgtttacaatgtttcccaaccaaagaga-actctaatcaagga-ccctaaaccctaaagttgcttcctttgatttcccaag 1746501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 479
Target Start/End: Complemental strand, 3439369 - 3439330
Alignment:
Q  440 tcaaatctgcacaagaacactttatactagcctccctctg 479  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  3439369 tcaaatctgcacaagaacactttatactagtcttcctctg 3439330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 19945546 - 19945643
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttca-acccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| |  |||||||||| |||||||||||||| | |||||||||| |||| || ||||||||||||||||    
T  19945546 tgattttcactcaccaaggtgtttacaatgtttcccgacccaagaga-actctaatcaaaga-ctctaaaccctaaagttgcttcctttgatttcccaag 19945643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 44303836 - 44303739
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| ||||  | ||||||||||| ||||    
T  44303836 tgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgtttcctttgatttctcaag 44303739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 415
Target Start/End: Complemental strand, 10929767 - 10929686
Alignment:
Q  331 caaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||| | |||||  |||||||||||| |||||||||||||| |||  ||||||| |||| |  ||||||||||||||||    
T  10929767 caaggtgtttacaatgttcccaacccaagaga-actctaatcaaagacccc--aaccctaaagttacctcctttgatttcccaag 10929686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 415
Target Start/End: Complemental strand, 43036391 - 43036308
Alignment:
Q  331 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||||||||    
T  43036391 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaag 43036308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 415
Target Start/End: Complemental strand, 30143289 - 30143227
Alignment:
Q  351 caacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||||||||    
T  30143289 caacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaag 30143227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 3e-43; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 27647848 - 27647755
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27647848 ttctctctacatggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 27647755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 6027233 - 6027141
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  6027233 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 6027141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 322 - 415
Target Start/End: Original strand, 33342288 - 33342380
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  33342288 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 33342380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 25421295 - 25421198
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  25421295 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 25421198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 16554859 - 16554762
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||    
T  16554859 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaag 16554762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 16631415 - 16631318
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||    
T  16631415 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaag 16631318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 34164843 - 34164751
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  34164843 ttctctctacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaactctagagcttc-ccctttgatttcccaag 34164751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 34167065 - 34166973
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  34167065 ttctctctacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaactctagagcttc-ccctttgatttcccaag 34166973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 317 - 408
Target Start/End: Complemental strand, 16653102 - 16653012
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatt 408  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  16653102 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgatt 16653012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 16578696 - 16578793
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||    
T  16578696 tgattctctctttacaacgtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaag 16578793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 16616684 - 16616587
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||    
T  16616684 tgattctctctttacaacgtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaag 16616587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 412091 - 411994
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| || ||||||||||||||| |||||||||||||| ||||    
T  412091 tgattttctctcttcaaggtgtttcccatgttttcaacccaagagaagctctaatcaaag-actctaaaccctagagttactccctttgatttctcaag 411994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 3072938 - 3073036
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||||||||||| ||||||||||||||||||| | |||||||||||  ||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  3072938 tgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaaga-ctctaaaccctagagtttctccctttgatttcccaag 3073036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 6097618 - 6097717
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| |||||||| | |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6097618 tgattttcactcaccaaggtgtttaccatgtttcccaaccaaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaag 6097717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 2171716 - 2171814
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| | ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  2171716 tgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaaactctaatcaaaga-ccctaaaccctagagttgctccctttgatttcccaag 2171814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 31404859 - 31404957
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||||| ||||||||||| ||||||||||||  ||||||||||||| |||| |  ||||||||||||||||    
T  31404859 tgattttcactcaccaaggtgtttacaatgttttccaacccaagaga-actctaatcaaaagaccctaaaccctaaagttgcctcctttgatttcccaag 31404957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 16452515 - 16452612
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| ||||||||||||| |||||||||||||| |||||||| ||| |||| ||  |||||||||||||||    
T  16452515 tgattttcactcaccaaggtgtttacaatgtttctcaacccaagaga-actctaatcaaaga-ccctaaactctaaagttgcttactttgatttcccaag 16452612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 5406384 - 5406481
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| | ||||| ||||| |||||||||||||| |||||||||||| |||| |  ||||||||||||||||    
T  5406384 tgattttcactcaccaaggtgtttacaatgtttcccaacccgagaga-actctaatcaaaga-ccctaaaccctaaagttgcctcctttgatttcccaag 5406481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 5410709 - 5410806
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| | ||||| ||||| |||||||||||||| |||||||||||| |||| |  ||||||||||||||||    
T  5410709 tgattttcactcaccaaggtgtttacaatgtttcccaacccgagaga-actctaatcaaaga-ccctaaaccctaaagttgcctcctttgatttcccaag 5410806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 479
Target Start/End: Complemental strand, 16554736 - 16554697
Alignment:
Q  440 tcaaatctgcacaagaacactttatactagcctccctctg 479  Q
    ||||||||||||||||||| ||||||||||||| ||||||    
T  16554736 tcaaatctgcacaagaacaatttatactagccttcctctg 16554697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 479
Target Start/End: Complemental strand, 16631292 - 16631253
Alignment:
Q  440 tcaaatctgcacaagaacactttatactagcctccctctg 479  Q
    ||||||||||||||||||| ||||||||||||| ||||||    
T  16631292 tcaaatctgcacaagaacaatttatactagccttcctctg 16631253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 479
Target Start/End: Complemental strand, 16652979 - 16652940
Alignment:
Q  440 tcaaatctgcacaagaacactttatactagcctccctctg 479  Q
    ||||||||||||||||||| ||||||||||||| ||||||    
T  16652979 tcaaatctgcacaagaacaatttatactagccttcctctg 16652940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 415
Target Start/End: Original strand, 30834738 - 30834819
Alignment:
Q  333 aggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| | |||||| ||||||||||||| |||||||||||||| || ||||||||| |||| || ||||||||||| ||||    
T  30834738 aggtgtttacaatgtttctcaacccaagaga-actctaatcaaaga-ccataaaccctaaagttgcttcctttgatttctcaag 30834819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 440 - 478
Target Start/End: Complemental strand, 27647730 - 27647692
Alignment:
Q  440 tcaaatctgcacaagaacactttatactagcctccctct 478  Q
    |||||||||||||||||||||||||||||| || |||||    
T  27647730 tcaaatctgcacaagaacactttatactagtcttcctct 27647692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 415
Target Start/End: Original strand, 5413613 - 5413675
Alignment:
Q  351 caacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||| ||||| |||||||||||||| |||||||||||| |||| |  ||||||||||||||||    
T  5413613 caacccgagaga-actctaatcaaaga-ccctaaaccctaaagttgcctcctttgatttcccaag 5413675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 498
Target Start/End: Complemental strand, 5674512 - 5674453
Alignment:
Q  441 caaatctgcacaagaacacttt--atactagcctccctctgaagcaatcacgtcacgatt 498  Q
    ||||||||||||||||||||||  |||||||||| |||||||  |||||  |||||||||    
T  5674512 caaatctgcacaagaacactttaaatactagccttcctctgatacaatcgtgtcacgatt 5674453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 322 - 415
Target Start/End: Original strand, 3908 - 4000
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  3908 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 4000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 322 - 415
Target Start/End: Original strand, 2786 - 2878
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  2786 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 2878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 6259 - 6167
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  6259 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgatttcccaag 6167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 2e-38; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 8395590 - 8395498
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  8395590 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 8395498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 7122672 - 7122575
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  7122672 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 7122575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 7124891 - 7124794
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  7124891 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 7124794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 5138275 - 5138183
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  5138275 ttctctctacaaggtatttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 5138183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 322 - 413
Target Start/End: Complemental strand, 8393381 - 8393291
Alignment:
Q  322 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttccca 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  8393381 ttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccataaaccctagagcttc-ccctttgatttccca 8393291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 5136050 - 5135957
Alignment:
Q  322 ttctctctacaaggtgtttcccatgtttt-caacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  5136050 ttctctctacaaggtatttcccatgtttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttc-ccctttgatttcccaag 5135957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 31495495 - 31495593
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||||||||||| ||||||||||||||||||| | |||||||||||  ||||||||||||| |  |||||||||||||| |||||||||||||||||||    
T  31495495 tgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaaga-ctataaaccctagagttactccctttgatttcccaag 31495593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 13992471 - 13992569
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| |||| || ||||||||||||||||    
T  13992471 tgattttcactcaccaaggtgtttacaatgtttcccaacccaagagagactctaatcaaaga-ccctaaaccctaaagttgctacctttgatttcccaag 13992569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 440 - 479
Target Start/End: Complemental strand, 8393264 - 8393225
Alignment:
Q  440 tcaaatctgcacaagaacactttatactagcctccctctg 479  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  8393264 tcaaatctgcacaagaacactttatactagccttcctctg 8393225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 440 - 479
Target Start/End: Complemental strand, 8395473 - 8395434
Alignment:
Q  440 tcaaatctgcacaagaacactttatactagcctccctctg 479  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  8395473 tcaaatctgcacaagaacactttatactagccttcctctg 8395434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 331 - 415
Target Start/End: Complemental strand, 5429647 - 5429564
Alignment:
Q  331 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| || ||||||||||||||||    
T  5429647 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacttcctttgatttcccaag 5429564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 9927639 - 9927740
Alignment:
Q  313 tcagtgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcc 411  Q
    |||||||||||| |||  |||||||||| | |||||| | ||||||||||| ||| |||||||||| |||| ||||||| |||| |  ||||||||||||    
T  9927639 tcagtgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actttaatcaaaga-ccctcaaccctaaagttacctcctttgatttcc 9927736  T
Q  412 caag 415  Q
    ||||    
T  9927737 caag 9927740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 415
Target Start/End: Original strand, 29999992 - 30000088
Alignment:
Q  318 gattttctctctacaaggtgtttcccatgttttcaa-cccaagagatactctaatcaaagaaccctaaaccctagagtt-tctccctttgatttcccaag 415  Q
    ||||||| |||  |||||||||| | |||||| ||| ||||||||| |||||||||||||| |||||||||||| |||| ||||| ||||||||||||||    
T  29999992 gattttcactcaccaaggtgtttacaatgtttccaaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgtctcc-tttgatttcccaag 30000088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 37740612 - 37740511
Alignment:
Q  313 tcagtgattttctctctacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcc 411  Q
    |||||||||||| |||  |||||||||| | ||||||  |||||||||||| ||||||||||||| ||||| ||||||| | || |  ||||||||||||    
T  37740612 tcagtgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcaaccctaaacttacctcctttgatttcc 37740515  T
Q  412 caag 415  Q
    ||||    
T  37740514 caag 37740511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 415
Target Start/End: Complemental strand, 48143010 - 48142927
Alignment:
Q  331 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||||||||    
T  48143010 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaag 48142927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 415
Target Start/End: Original strand, 52082857 - 52082940
Alignment:
Q  331 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||||||||    
T  52082857 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaag 52082940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 415
Target Start/End: Original strand, 52093885 - 52093947
Alignment:
Q  351 caacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||||||||    
T  52093885 caacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaag 52093947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 434515 - 434418
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||| ||| |||||||||| ||||||||||| |||||||||||||| |||||||||||| |||| || ||||||||||||||||    
T  434515 tgattttcactcaccaaggtatttaccatgttttccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcttcctttgatttcccaag 434418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 357 - 415
Target Start/End: Complemental strand, 22286 - 22229
Alignment:
Q  357 aagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  22286 aagagaaactctaatcaaaga-ccctaaaccctagagttgctccctttgatttcccaag 22229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 415
Target Start/End: Original strand, 11361 - 11445
Alignment:
Q  331 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||||| | |||||| | |||||||||||  ||||||||||||| || |||||||||||||| |||||||||||||||||||    
T  11361 caaggtgtttacaatgtttcccaacccaagagaagctctaatcaaaga-ccataaaccctagagttactccctttgatttcccaag 11445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 351 - 415
Target Start/End: Original strand, 8956 - 9019
Alignment:
Q  351 caacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    ||||||||||||  ||||||||||||| ||||||| ||||||||| |||||||||||||||||||    
T  8956 caacccaagagaagctctaatcaaaga-ccctaaagcctagagttactccctttgatttcccaag 9019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 899 - 802
Alignment:
Q  317 tgattttctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaag 415  Q
    |||||||| |||  |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| |||| || ||||||||||||||||    
T  899 tgattttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgctgcctttgatttcccaag 802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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