View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21681_high_12 (Length: 323)
Name: NF21681_high_12
Description: NF21681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21681_high_12 |
 | |
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| [»] scaffold0231 (1 HSPs) |
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| [»] scaffold0207 (1 HSPs) |
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| [»] scaffold0004 (2 HSPs) |
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| [»] scaffold0411 (1 HSPs) |
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| [»] scaffold0056 (2 HSPs) |
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| [»] scaffold1186 (1 HSPs) |
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| [»] scaffold0005 (1 HSPs) |
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| [»] scaffold0676 (1 HSPs) |
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| [»] scaffold0220 (1 HSPs) |
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| [»] scaffold0026 (1 HSPs) |
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| [»] scaffold0594 (1 HSPs) |
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| [»] scaffold0108 (1 HSPs) |
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| [»] scaffold0149 (1 HSPs) |
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| [»] scaffold0139 (1 HSPs) |
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| [»] scaffold0048 (1 HSPs) |
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| [»] scaffold0878 (1 HSPs) |
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| [»] scaffold0853 (1 HSPs) |
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| [»] scaffold0431 (1 HSPs) |
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| [»] scaffold0328 (1 HSPs) |
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| [»] scaffold0174 (2 HSPs) |
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| [»] scaffold0061 (2 HSPs) |
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| [»] scaffold0031 (1 HSPs) |
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| [»] scaffold0098 (1 HSPs) |
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| [»] scaffold0205 (1 HSPs) |
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| [»] scaffold0086 (1 HSPs) |
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| [»] scaffold0037 (1 HSPs) |
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| [»] scaffold1941 (1 HSPs) |
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| [»] scaffold0802 (1 HSPs) |
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| [»] scaffold0555 (1 HSPs) |
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| [»] scaffold0414 (1 HSPs) |
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| [»] scaffold0379 (1 HSPs) |
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| [»] scaffold0241 (1 HSPs) |
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| [»] scaffold0148 (1 HSPs) |
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| [»] scaffold0028 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 166; Significance: 8e-89; HSPs: 25)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 73 - 321
Target Start/End: Original strand, 22530202 - 22530451
Alignment:
| Q |
73 |
ggttgtcaatcttctgtcaataacgactggtcgaattggttggttcttcatggaagtagtaaggctatgtcggatgatgttaaaggtgtgggaaagatgt |
172 |
Q |
| |
|
|||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |
|
|
| T |
22530202 |
ggttctcaatcttctctcaataacgactggtcaaattggttggttcttcatggaagtagtaaggctatgtcggatgatgttaaaggtatgggaaagaagt |
22530301 |
T |
|
| Q |
173 |
tgggggtaaactttcaagaggatatttaaaataggtttgatgttttgtcaggtgcgggaagaaaaaataaagagggtgacggggaagagaagtgaggtcg |
272 |
Q |
| |
|
|||||||||| || |||| |||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||| |||||||||||| |
|
|
| T |
22530302 |
tgggggtaaatttccaaggggatatttctaataggtttgatgttctgtcaggtgtgggaagaaaaaataaagagggtaacggggaagggaagtgaggtcg |
22530401 |
T |
|
| Q |
273 |
agggttggtgggaggtgcgacggtg-gttttggtgtggtggagtagtagt |
321 |
Q |
| |
|
||| ||||||||||||| || |||| ||||||||||||||||| ||||| |
|
|
| T |
22530402 |
aggattggtgggaggtgtgagggtgttttttggtgtggtggagtggtagt |
22530451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 73 - 315
Target Start/End: Complemental strand, 29549459 - 29549216
Alignment:
| Q |
73 |
ggttgtcaatcttctgtcaataacgactggtcgaattggttggttcttcatggaagtagtaaggctatgtcggatgatgttaaaggtgtgggaaagatgt |
172 |
Q |
| |
|
|||| |||||| ||| | ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| | |
|
|
| T |
29549459 |
ggttctcaatcatctattaataatgactggtcgaattggttggttcttcatggaagtagtaaggctatttcggatgatgttaaaggaatgggaaagatat |
29549360 |
T |
|
| Q |
173 |
tgggggtaaactttcaagaggatatttaaaataggtttgatgttttgtcaggtgcgggaagaaaaaataaagagggtgacggggaagagaagtgaggtcg |
272 |
Q |
| |
|
||||||| || ||||||| ||||| ||| ||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |
|
|
| T |
29549359 |
tgggggtgaattttcaaggggatacacaaagtaggtttaatgtattgtcaggtgcgggaagaaaaaataaagagggtgatggggaagagaagtgaggccg |
29549260 |
T |
|
| Q |
273 |
agggttggtgggaggtg-cgacggtggttttggtgtggtggagt |
315 |
Q |
| |
|
||||||||||||||||| || ||||| ||||||||||| |||| |
|
|
| T |
29549259 |
agggttggtgggaggtgtggagggtgggtttggtgtggtagagt |
29549216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 79 - 280
Target Start/End: Original strand, 6921069 - 6921270
Alignment:
| Q |
79 |
caatcttctgtcaataacgactggtcgaattggttggttcttcatggaagtagtaaggctatgtcggatgatgttaaaggtgtgggaaagatgttggggg |
178 |
Q |
| |
|
||||| ||||| ||||| ||||||||||||||||| || |||||||| | ||| |||||| | ||||||||||||| || |||| ||| || || ||| |
|
|
| T |
6921069 |
caatcatctgttaataatgactggtcgaattggttagtacttcatggtaatagcaaggctttatcggatgatgttagggggatgggtaagttggtgaggg |
6921168 |
T |
|
| Q |
179 |
taaactttcaagaggatatttaaaataggtttgatgttttgtcaggtgcgggaagaaaaaataaagagggtgacggggaagagaagtgaggtcgagggtt |
278 |
Q |
| |
|
| || ||||||| ||||| | |||||||||||||||| |||||||| || || |||||||||||||||||||| || | ||||| | |||||||||||| |
|
|
| T |
6921169 |
tgaattttcaaggggataatcaaaataggtttgatgtgttgtcaggagctggtagaaaaaataaagagggtgatggtggagagagttaaggtcgagggtt |
6921268 |
T |
|
| Q |
279 |
gg |
280 |
Q |
| |
|
|| |
|
|
| T |
6921269 |
gg |
6921270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 17208606 - 17208536
Alignment:
| Q |
8 |
cagagaagagaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||| |
|
|
| T |
17208606 |
cagagaagagaacctttcaatcgatcaatctaaggtaagggtgggactagctttctctaataatgagttgt |
17208536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 6156772 - 6156722
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
6156772 |
tcgatcaatctaaggtaagggtgggactagctttctctaataatgggttgt |
6156722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 14442249 - 14442187
Alignment:
| Q |
16 |
agaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||||| ||||||||||| | |||||||||||||| |
|
|
| T |
14442249 |
agaacctttcgatcaatcaatctaaggtaagggtgggactagctttctgtaataatgggttgt |
14442187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 2841496 - 2841546
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
2841496 |
tcgatcaatctaaggtaagggtgtgactagctttctctaataatgggttgt |
2841546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 14520508 - 14520458
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| | |||||||||||||| |
|
|
| T |
14520508 |
tcgatcaatctaaggtaagggtgggactagctttctttaataatgggttgt |
14520458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 3527154 - 3527197
Alignment:
| Q |
35 |
atctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
3527154 |
atctaaggtaagggtgggactagctttctctaataatgggttgt |
3527197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 22841274 - 22841319
Alignment:
| Q |
33 |
caatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||| |||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
22841274 |
caatctaatgtaagggtgggactagctttctctaataatgggttgt |
22841319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 14641544 - 14641588
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||| ||||||| |||||||||||||||| |
|
|
| T |
14641544 |
aatctaaggtaagggtgggattagctttctctaataatgggttgt |
14641588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 54875474 - 54875514
Alignment:
| Q |
38 |
taaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
54875474 |
taaggtaagggtgggactagctttctctaataatgggttgt |
54875514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 5215709 - 5215659
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
||||||||| |||||||||||| | ||||||||| |||||||||| ||||| |
|
|
| T |
5215709 |
tcgatcaatataaggtaagggtggcactagctttctctaataatgagttgt |
5215659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 12917301 - 12917346
Alignment:
| Q |
33 |
caatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
||||||||| ||||||| |||||| |||| |||||||||||||||| |
|
|
| T |
12917301 |
caatctaagataagggtgggactaactttctctaataatgggttgt |
12917346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 14152398 - 14152439
Alignment:
| Q |
37 |
ctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||| ||||| |
|
|
| T |
14152398 |
ctaaggtaagggtgggactagctttctctaataatgagttgt |
14152439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 45803326 - 45803371
Alignment:
| Q |
33 |
caatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||| || ||||| ||||||||||| |||||||||||||||| |
|
|
| T |
45803326 |
caatctaaagttagggtgggactagctttctctaataatgggttgt |
45803371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 6159461 - 6159417
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| |||| ||||| |||||||||||||||| |
|
|
| T |
6159461 |
aatctaaggtaagggtgagactcgctttctctaataatgggttgt |
6159417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 13185957 - 13185917
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||| |||||| |
|
|
| T |
13185957 |
tcgatcaatctaaggtaagggtgggactaactttctctaat |
13185917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 19568198 - 19568238
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||| |||||| |
|
|
| T |
19568198 |
tcgatcaatctaaggtaagggtgggactaactttctctaat |
19568238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 29907695 - 29907651
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||||||||||| | ||||| |||||||| |
|
|
| T |
29907695 |
aatctaaggtaagggtgggactagctttctttaatattgggttgt |
29907651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 29948861 - 29948817
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||||||||||| | ||||| |||||||| |
|
|
| T |
29948861 |
aatctaaggtaagggtgggactagctttctttaatattgggttgt |
29948817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 29998015 - 29997971
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||||||||||| | ||||| |||||||| |
|
|
| T |
29998015 |
aatctaaggtaagggtgggactagctttctttaatattgggttgt |
29997971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 40808058 - 40808018
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||| |||||| |
|
|
| T |
40808058 |
tcgatcaatctaaggtaagggtgggactaactttctctaat |
40808018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 40812895 - 40812855
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||| |||||| |
|
|
| T |
40812895 |
tcgatcaatctaaggtaagggtgggactaactttctctaat |
40812855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 44274480 - 44274440
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||| |||||| |
|
|
| T |
44274480 |
tcgatcaatctaaggtaagggtgggactaactttctctaat |
44274440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 16)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 85 - 280
Target Start/End: Complemental strand, 54874728 - 54874533
Alignment:
| Q |
85 |
tctgtcaataacgactggtcgaattggttggttcttcatggaagtagtaaggctatgtcggatgatgttaaaggtgtgggaaagatgttgggggtaaact |
184 |
Q |
| |
|
||||| ||| |||||||||||| |||||| || |||||||| | ||| |||||| | ||||||||||||| || |||||||| | ||||||| || | |
|
|
| T |
54874728 |
tctgttaattacgactggtcgagttggttagtacttcatggtaatagcaaggctttatcggatgatgttagggggatgggaaagttagtgggggtgaatt |
54874629 |
T |
|
| Q |
185 |
ttcaagaggatatttaaaataggtttgatgttttgtcaggtgcgggaagaaaaaataaagagggtgacggggaagagaagtgaggtcgagggttgg |
280 |
Q |
| |
|
|||||| ||||||| |||||||||||||||| |||||||||| ||||||||||||||||||| ||| || | ||||| || ||| |||||||||| |
|
|
| T |
54874628 |
ttcaaggggatattcaaaataggtttgatgtgttgtcaggtgttggaagaaaaaataaagaggttgatggtggagagaggtaaggccgagggttgg |
54874533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 251
Target Start/End: Original strand, 33096113 - 33096279
Alignment:
| Q |
85 |
tctgtcaataacgactggtcgaattggttggttcttcatggaagtagtaaggctatgtcggatgatgttaaaggtgtgggaaagatgttgggggtaaact |
184 |
Q |
| |
|
||||| ||||| |||||| ||||||||||| ||||||||||||| || ||| |||||| | ||| |||| | | |||||||| || ||||| | || | |
|
|
| T |
33096113 |
tctgttaataatgactggatgaattggttggctcttcatggaagtggtgaggttatgtcagctgacgttagggatttgggaaaggtggtggggttgaatt |
33096212 |
T |
|
| Q |
185 |
ttcaagaggatatttaaaataggtttgatgttttgtcaggtgcgggaagaaaaaataaagagggtga |
251 |
Q |
| |
|
|||||| ||||| | ||| ||| ||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
33096213 |
ttcaaggggataagaataatcagttcgatgtgttgtcaggtgcgggaagaaaaaataaagagggtga |
33096279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 9622548 - 9622500
Alignment:
| Q |
31 |
atcaatctaaggtaagggtcggactagctttttctaataatgggttgtc |
79 |
Q |
| |
|
||||||||||||||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
9622548 |
atcaatctaaggtaagggtgggactagctttctctaataatgggttgtc |
9622500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 14631197 - 14631147
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
14631197 |
tcgatcaatctaaggtaagggtgagactagctttctctaataatgggttgt |
14631147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 16297000 - 16296950
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |||||||||| ||||| |
|
|
| T |
16297000 |
tcgatcaatctaaggtaagggtgggactagctttctctaataatgagttgt |
16296950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 10273439 - 10273395
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
10273439 |
aatctaaggtaagggtgggactagctttctctaataatgggttgt |
10273395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 55583251 - 55583208
Alignment:
| Q |
35 |
atctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
55583251 |
atctaaggtaagggtgggactagctttctctaataatgggttgt |
55583208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 13847267 - 13847213
Alignment:
| Q |
24 |
tcaatcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
||||||||| || ||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
13847267 |
tcaatcgattaacctaaggtaagggtgagactagctttctctaataatgggttgt |
13847213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 13154250 - 13154330
Alignment:
| Q |
208 |
tttgatgttttgtcaggtgcgggaagaaaaaataaagagggtgacggggaagagaagtgaggtcgagggttggtgggaggtg |
289 |
Q |
| |
|
|||||||| |||||||| | ||||||||||||||||||||| || ||| ||| ||||| ||| | |||||||||| |||||| |
|
|
| T |
13154250 |
tttgatgtgttgtcaggggtgggaagaaaaaataaagagggagatgggaaagggaagt-aggccaagggttggtgtgaggtg |
13154330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 9639066 - 9639022
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||| ||||| |
|
|
| T |
9639066 |
aatctaaggtaagggtgggactagctttctctaataatgagttgt |
9639022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 12424290 - 12424330
Alignment:
| Q |
38 |
taaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
12424290 |
taaggtaagggtgggactagctttctctaataatgggttgt |
12424330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 26446260 - 26446219
Alignment:
| Q |
37 |
ctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||| |||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
26446260 |
ctaaagtaagggtaggactagctttctctaataatgggttgt |
26446219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 15115284 - 15115244
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||| |||||| |
|
|
| T |
15115284 |
tcgatcaatctaaggtaagggtgggactaactttctctaat |
15115244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 15239810 - 15239850
Alignment:
| Q |
32 |
tcaatctaaggtaagggtcggactagctttttctaataatg |
72 |
Q |
| |
|
|||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
15239810 |
tcaatctaaggtaagggtgagactagctttctctaataatg |
15239850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 19434549 - 19434589
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||| |||||| |
|
|
| T |
19434549 |
tcgatcaatctaaggtaagggtgggactaactttctctaat |
19434589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 25513907 - 25513863
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||| ||| ||||||||||| |||||||||| ||||| |
|
|
| T |
25513907 |
aatctaaggtaatggtgggactagctttctctaataatgagttgt |
25513863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0231 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0231
Description:
Target: scaffold0231; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 17491 - 17561
Alignment:
| Q |
8 |
cagagaagagaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
17491 |
cagagaagagaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaataatggattgt |
17561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 18744956 - 18744886
Alignment:
| Q |
8 |
cagagaagagaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||| |
|
|
| T |
18744956 |
cagagaagtgaacctttcaatcgatcaatctaaggtaagggtgggactaactttctctaataatgggttgt |
18744886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 6551260 - 6551320
Alignment:
| Q |
8 |
cagagaagagaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||| ||||| |||| |||||| |
|
|
| T |
6551260 |
cagagaagataacctttcaatcgatcaatctaaggtaagggtgagactaactttctctaat |
6551320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 21617898 - 21617958
Alignment:
| Q |
8 |
cagagaagagaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||||||||| |||||| |||| |||||| |
|
|
| T |
21617898 |
cagagaagagaacctttcgatcgataaatctaaggtaagggtgggactaactttctctaat |
21617958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 32607312 - 32607356
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
32607312 |
aatctaaggtaagggtgggactagctttctctaataatgggttgt |
32607356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 16063808 - 16063763
Alignment:
| Q |
33 |
caatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
||||||||||||||||| |||||| |||| |||||||||||||||| |
|
|
| T |
16063808 |
caatctaaggtaagggtgggactacctttctctaataatgggttgt |
16063763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 20469153 - 20469206
Alignment:
| Q |
15 |
gagaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||| |||||| |||| |||||| |
|
|
| T |
20469153 |
gagaagctttcgatcgatcaatctaaggtaagggtgggactaactttctctaat |
20469206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 21398640 - 21398684
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||| ||||||| |||||||||||||||| |
|
|
| T |
21398640 |
aatctaaggtaagggtgggattagctttctctaataatgggttgt |
21398684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 23199207 - 23199247
Alignment:
| Q |
38 |
taaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
23199207 |
taaggtaagggtgggactagctttctctaataatgggttgt |
23199247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 54; Significance: 5e-22; HSPs: 14)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 21399798 - 21399729
Alignment:
| Q |
9 |
agagaagagaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
21399798 |
agagaagagaacctttcatttgatcaatctaaggtaagggtgggactagctttctctaataatgggttgt |
21399729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 21794291 - 21794222
Alignment:
| Q |
9 |
agagaagagaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
21794291 |
agagaagagaacctttcatttgatcaatctaaggtaagggtgggactagctttctctaataatgggttgt |
21794222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 45469189 - 45469249
Alignment:
| Q |
8 |
cagagaagagaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||| |
|
|
| T |
45469189 |
cagagaagagaacctttcaatcgatcaatctaaggtaagggtgagactaactttctctaat |
45469249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 6101729 - 6101783
Alignment:
| Q |
14 |
agagaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| |||||| |||| |||||| |
|
|
| T |
6101729 |
agagaacctttcaatcgatcaatctaaggtaaaggtgggactaactttctctaat |
6101783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 22208325 - 22208281
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
22208325 |
aatctaaggtaagggtgggactagctttctctaataatgggttgt |
22208281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 22345220 - 22345176
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
22345220 |
aatctaaggtaagggtgggactagctttctctaataatgggttgt |
22345176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 22356880 - 22356836
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
22356880 |
aatctaaggtaagggtgggactagctttctctaataatgggttgt |
22356836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 36727016 - 36727068
Alignment:
| Q |
16 |
agaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| |||| |||||| |
|
|
| T |
36727016 |
agaacctttcaatcgatcaatctaaggtaagggtgagactaactttctctaat |
36727068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 18816285 - 18816335
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
||||||||| |||||||||||| ||||||||||| ||||| |||||||||| |
|
|
| T |
18816285 |
tcgatcaatataaggtaagggtgggactagctttctctaaaaatgggttgt |
18816335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 23899957 - 23900017
Alignment:
| Q |
8 |
cagagaagagaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
|||||| ||||| ||||| ||||||||||||||||||||||| ||||| |||| |||||| |
|
|
| T |
23899957 |
cagagaggagaagctttcgatcgatcaatctaaggtaagggtgtgactaactttctctaat |
23900017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 22610262 - 22610307
Alignment:
| Q |
33 |
caatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
||||||||||||||||| |||||| |||| |||||||||| ||||| |
|
|
| T |
22610262 |
caatctaaggtaagggtgggactaactttctctaataatgagttgt |
22610307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 36732411 - 36732452
Alignment:
| Q |
37 |
ctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
36732411 |
ctaaggtaagggtgtgactagctttctctaataatgggttgt |
36732452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 18834474 - 18834434
Alignment:
| Q |
38 |
taaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||| |||| |
|
|
| T |
18834474 |
taaggtaagggtgggactagctttctctaataatggattgt |
18834434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 22483834 - 22483798
Alignment:
| Q |
42 |
gtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
22483834 |
gtaagggtgggactagctttctctaataatgggttgt |
22483798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 49; Significance: 5e-19; HSPs: 27)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 48807295 - 48807355
Alignment:
| Q |
8 |
cagagaagagaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||| |
|
|
| T |
48807295 |
cagagaagagaacctttcaatcgatcaatctaaggtaagggtgggactaactttctctaat |
48807355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 14218865 - 14218925
Alignment:
| Q |
8 |
cagagaagagaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||| |
|
|
| T |
14218865 |
cagagaagagaacctttcaatcgatcaatctaaggtaagggtgagactaactttctctaat |
14218925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 708419 - 708469
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||| |||||||||||||||| |
|
|
| T |
708419 |
tcgatcaatctaaggtaggggtgggactagctttctctaataatgggttgt |
708469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 15575639 - 15575689
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||| |||||||||||||||| |
|
|
| T |
15575639 |
tcgatcaatctaaggtaggggtgggactagctttctctaataatgggttgt |
15575689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 18874655 - 18874705
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
18874655 |
tcgatcaatctaaggtaagggtgagactagctttctctaataatgggttgt |
18874705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 20252172 - 20252222
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |||||||||| ||||| |
|
|
| T |
20252172 |
tcgatcaatctaaggtaagggtaggactagctttctctaataatgagttgt |
20252222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 47095511 - 47095465
Alignment:
| Q |
31 |
atcaatctaaggtaagggtcggactagctttttctaataatgggttg |
77 |
Q |
| |
|
||||||||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
47095511 |
atcaatctaaggtaagggtgggactagctttctctaataatgggttg |
47095465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 58409 - 58453
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
58409 |
aatctaaggtaagggtgggactagctttctctaataatgggttgt |
58453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 16078412 - 16078352
Alignment:
| Q |
8 |
cagagaagagaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
||||||||||||||||||||||| |||| |||||||||||| |||||| |||| |||||| |
|
|
| T |
16078412 |
cagagaagagaacctttcaatcggtcaagataaggtaagggtgggactaactttctctaat |
16078352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 38299804 - 38299760
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
38299804 |
aatctaaggtaagggtgggactagctttctctaataatgggttgt |
38299760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 3287806 - 3287756
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| ||||||||| |||||| |
|
|
| T |
3287806 |
tcgatcaatctaaggtaagggtgagactagctttctctaataataggttgt |
3287756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 76
Target Start/End: Original strand, 13744506 - 13744548
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggtt |
76 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
13744506 |
aatctaaggtaagggtgggactagctttctctaataatgggtt |
13744548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 18570704 - 18570659
Alignment:
| Q |
33 |
caatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
||||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
18570704 |
caatctaaggtaagggtgagactagctttctctaataatgggttgt |
18570659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 33556100 - 33556145
Alignment:
| Q |
33 |
caatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
||||||||| ||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
33556100 |
caatctaagataagggtgggactagctttctctaataatgggttgt |
33556145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 19195667 - 19195623
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||| ||||| |
|
|
| T |
19195667 |
aatctaaggtaagggtgggactagctttctctaataatgagttgt |
19195623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 25943319 - 25943279
Alignment:
| Q |
38 |
taaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
25943319 |
taaggtaagggtgggactagctttctctaataatgggttgt |
25943279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 8488083 - 8488134
Alignment:
| Q |
27 |
atcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||| || ||||||||||||| |||||| |||| |||||||||||||||| |
|
|
| T |
8488083 |
atcgattaacctaaggtaagggtgggactaactttctctaataatgggttgt |
8488134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 8513742 - 8513793
Alignment:
| Q |
27 |
atcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||| || ||||||||||||| |||||| |||| |||||||||||||||| |
|
|
| T |
8513742 |
atcgattaacctaaggtaagggtgggactaactttctctaataatgggttgt |
8513793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 36300634 - 36300681
Alignment:
| Q |
31 |
atcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
||||||||||||||| ||| |||||||||| |||||||||||||||| |
|
|
| T |
36300634 |
atcaatctaaggtaaaggtgagactagctttctctaataatgggttgt |
36300681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 15720853 - 15720791
Alignment:
| Q |
16 |
agaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||| ||| ||| |||||| |||||||| ||| ||||||||||| ||| |||||||||||| |
|
|
| T |
15720853 |
agaaccattcgatcaatcaatttaaggtaaaggtgggactagctttctctcataatgggttgt |
15720791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 16541658 - 16541707
Alignment:
| Q |
202 |
aataggtttgatgttttgtcaggtgcgggaagaaaaaataaagagggtga |
251 |
Q |
| |
|
|||| ||||||||| ||||| || ||||||||||||||||| |||||||| |
|
|
| T |
16541658 |
aatatgtttgatgtgttgtccggagcgggaagaaaaaataaggagggtga |
16541707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 16624004 - 16623955
Alignment:
| Q |
202 |
aataggtttgatgttttgtcaggtgcgggaagaaaaaataaagagggtga |
251 |
Q |
| |
|
|||| ||||||||| ||||| || ||||||||||||||||| |||||||| |
|
|
| T |
16624004 |
aatatgtttgatgtgttgtccggagcgggaagaaaaaataaggagggtga |
16623955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 43745709 - 43745668
Alignment:
| Q |
37 |
ctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||| ||||| |
|
|
| T |
43745709 |
ctaaggtaagggtgggactagctttctctaataatgagttgt |
43745668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 8930761 - 8930805
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| |||||| ||| |||||||||||||||| |
|
|
| T |
8930761 |
aatctaaggtaagggtgggactacatttctctaataatgggttgt |
8930805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 13315078 - 13315122
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||||| |||| |||||||||||||||| |
|
|
| T |
13315078 |
aatctaaggtaagggtgagactatctttctctaataatgggttgt |
13315122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 20586414 - 20586374
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||| |||||| |
|
|
| T |
20586414 |
tcgatcaatctaaggtaagggtgggactaactttctctaat |
20586374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 43276744 - 43276784
Alignment:
| Q |
38 |
taaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||| |||||| |||| |||||||||||||||| |
|
|
| T |
43276744 |
taaggtaagggtgggactaactttctctaataatgggttgt |
43276784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0207 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0207
Description:
Target: scaffold0207; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 13362 - 13422
Alignment:
| Q |
8 |
cagagaagagaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| |||||| |||| |||||| |
|
|
| T |
13362 |
cagagaatagaacctttcaatcgatcaatctaaggtaagggtgggactaactttctctaat |
13422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 3539919 - 3539859
Alignment:
| Q |
8 |
cagagaagagaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||| |||||| |||| |||||| |
|
|
| T |
3539919 |
cagagaagagaacctttcaatcgatgaatctaaggtaagggtgggactaactttctctaat |
3539859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 21315466 - 21315516
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
21315466 |
tcgatcaatctaaggtaagggtgggactagctttctctaataatgggttgt |
21315516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 21335256 - 21335306
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
21335256 |
tcgatcaatctaaggtaagggtgggactagctttctctaataatgggttgt |
21335306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 23801552 - 23801508
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
23801552 |
aatctaaggtaagggtgggactagctttctctaataatgggttgt |
23801508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 23610679 - 23610638
Alignment:
| Q |
37 |
ctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
23610679 |
ctaaggtaagggtgggactagctttctctaataatgggttgt |
23610638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 105 - 286
Target Start/End: Original strand, 24733970 - 24734151
Alignment:
| Q |
105 |
gaattggttggttcttcatggaagtagtaaggctatgtcggatgatgttaaaggtgtgggaaagatgttgggggtaaactttcaagaggatatttaaaat |
204 |
Q |
| |
|
||||||||||||||||||||| | ||| |||| ||||| ||||||||||| ||| |||||||| ||||| | ||| ||| ||||| | ||| |
|
|
| T |
24733970 |
gaattggttggttcttcatggtaatagcaaggtgatgtcagatgatgttaagggtatgggaaaggcagtggggttgtcttttaaaggggataagcataat |
24734069 |
T |
|
| Q |
205 |
aggtttgatgttttgtcaggtgcgggaagaaaaaataaagagggtgacggggaagagaagtgaggtcgagggttggtgggag |
286 |
Q |
| |
|
| |||||| || |||||||| ||||||||||||| || |||| |||| ||| || ||||| ||||||||||| | |||||| |
|
|
| T |
24734070 |
atgtttgaagtgttgtcaggagcgggaagaaaaattagagagagtgatgggttagggaagtaaggtcgagggtggttgggag |
24734151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 28652530 - 28652570
Alignment:
| Q |
16 |
agaacctttcaatcgatcaatctaaggtaagggtcggacta |
56 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
28652530 |
agaacctttcgatcgatcaatctaaggtaagggtgggacta |
28652570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 149497 - 149541
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| | ||||||||| |||||||||| ||||| |
|
|
| T |
149497 |
aatctaaggtaagggtggaactagctttctctaataatgagttgt |
149541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 18387713 - 18387761
Alignment:
| Q |
8 |
cagagaagagaacctttcaatcgatcaatctaaggtaagggtcggacta |
56 |
Q |
| |
|
|||||| ||||| ||||| |||||||||||||| |||||||| |||||| |
|
|
| T |
18387713 |
cagagaggagaagctttcgatcgatcaatctaaagtaagggtgggacta |
18387761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 21369349 - 21369305
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| |||| |||||| ||||| |||||||||| |
|
|
| T |
21369349 |
aatctaaggtaagggtgggacaagctttctctaacaatgggttgt |
21369305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 24516248 - 24516208
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||| |||||| |
|
|
| T |
24516248 |
tcgatcaatctaaggtaagggtgggactaactttctctaat |
24516208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 111442 - 111372
Alignment:
| Q |
8 |
cagagaagagaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||| ||||| ||||| |||||| |||||||||||||||| || |||||||| |||||||||||||||| |
|
|
| T |
111442 |
cagagaggagaagctttcgatcgattaatctaaggtaagggtggggctagctttctctaataatgggttgt |
111372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 75993 - 75949
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||||||||||| || ||||||||||||| |
|
|
| T |
75993 |
aatctaaggtaagggtgggactagctttctccaataatgggttgt |
75949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0411 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0411
Description:
Target: scaffold0411; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 13390 - 13435
Alignment:
| Q |
11 |
agaagagaacctttcaatcgatcaatctaaggtaagggtcggacta |
56 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
13390 |
agaagagaacctttcaatcgatcaatctaaggtaagggtgggacta |
13435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 23501754 - 23501713
Alignment:
| Q |
8 |
cagagaagagaacctttcaatcgatcaatctaaggtaagggt |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23501754 |
cagagaagagaacctttcaatcgatcaatctaaggtaagggt |
23501713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 10446273 - 10446229
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
10446273 |
aatctaaggtaagggtgggactagctttctctaataatgggttgt |
10446229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 21683074 - 21683115
Alignment:
| Q |
37 |
ctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
21683074 |
ctaaggtaagggtgggactagctttctctaataatgggttgt |
21683115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 19825482 - 19825525
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttg |
77 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
19825482 |
aatctaaggtaagggtgagactagctttctctaataatgggttg |
19825525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 18982646 - 18982584
Alignment:
| Q |
16 |
agaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||| |||| ||||||||||||||| ||| ||| || |||| |||||||||||||||| |
|
|
| T |
18982646 |
agaaccttgtaatcaatcaatctaaggtaacggtgggattaactttatctaataatgggttgt |
18982584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 29045325 - 29045283
Alignment:
| Q |
36 |
tctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
29045325 |
tctaaggtaagggtgagactagctttctctaataatgggttgt |
29045283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 15890702 - 15890742
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||| |||||| |
|
|
| T |
15890702 |
tcgatcaatctaaggtaagggtgggactaactttctctaat |
15890742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 23658145 - 23658101
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||| |||||| |
|
|
| T |
23658145 |
aatctaaggtaagggtgggactagctttccctaataataggttgt |
23658101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 25601308 - 25601340
Alignment:
| Q |
16 |
agaacctttcaatcgatcaatctaaggtaaggg |
48 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |
|
|
| T |
25601308 |
agaacctttcgatcgatcaatctaaggtaaggg |
25601340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0056 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0056
Description:
Target: scaffold0056; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 67203 - 67143
Alignment:
| Q |
8 |
cagagaagagaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| ||| |||||| |||| |||||| |
|
|
| T |
67203 |
cagagaagagaacctttcaattgatcaatctaaggtaaaggtgggactaactttctctaat |
67143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0056; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 18328 - 18287
Alignment:
| Q |
37 |
ctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
18328 |
ctaaggtaagggtgtgactagctttctctaataatgggttgt |
18287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 16)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 13302984 - 13302924
Alignment:
| Q |
8 |
cagagaagagaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| ||||| |||| |||||| |
|
|
| T |
13302984 |
cagagaatagaacctttcaatcgatcaatctaaggtaagggtgagactaactttctctaat |
13302924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 50544934 - 50544884
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
50544934 |
tcgatcaatctaaggtaagggtgagactagctttctctaataatgggttgt |
50544884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 21239024 - 21239079
Alignment:
| Q |
13 |
aagagaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| |||| |||||| |||| |||||| |
|
|
| T |
21239024 |
aagataacctttcaatcgatcaatctaaggtatgggtgggactaactttctctaat |
21239079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 34392825 - 34392780
Alignment:
| Q |
33 |
caatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
||||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
34392825 |
caatctaaggtaagggtgtgactagctttctctaataatgggttgt |
34392780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 8306662 - 8306618
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
||||||||||||| || ||||||||||| |||||||||||||||| |
|
|
| T |
8306662 |
aatctaaggtaagagtgggactagctttctctaataatgggttgt |
8306618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 35895155 - 35895111
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
||||||||||| |||| ||||||||||| |||||||||||||||| |
|
|
| T |
35895155 |
aatctaaggtatgggtaggactagctttatctaataatgggttgt |
35895111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 38056668 - 38056712
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||| ||||||||||| |
|
|
| T |
38056668 |
aatctaaggtaagggtgggactagctttctctagtaatgggttgt |
38056712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 45499598 - 45499554
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
45499598 |
aatctaaggtaagggtgagactagctttctctaataatgggttgt |
45499554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 7703179 - 7703140
Alignment:
| Q |
33 |
caatctaaggtaagggtcggactagctttttctaataatg |
72 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
7703179 |
caatctaaggtaagggtgggactagctttctctaataatg |
7703140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 17901792 - 17901834
Alignment:
| Q |
36 |
tctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
17901792 |
tctaaggtaagggtgagactagctttctctaataatgggttgt |
17901834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 20588695 - 20588650
Alignment:
| Q |
33 |
caatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||| |||||||||||| ||| ||||||| |||||||||||||||| |
|
|
| T |
20588695 |
caatttaaggtaagggtgggattagctttctctaataatgggttgt |
20588650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 20593233 - 20593188
Alignment:
| Q |
33 |
caatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||| |||||||||||| ||| ||||||| |||||||||||||||| |
|
|
| T |
20593233 |
caatttaaggtaagggtgggattagctttctctaataatgggttgt |
20593188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 7051912 - 7051952
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||| |||||| |
|
|
| T |
7051912 |
tcgatcaatctaaggtaagggtgggactaactttctctaat |
7051952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 22145666 - 22145706
Alignment:
| Q |
38 |
taaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||| |||||| |||| |||||||||||||||| |
|
|
| T |
22145666 |
taaggtaagggtgggactaactttctctaataatgggttgt |
22145706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 24723329 - 24723381
Alignment:
| Q |
16 |
agaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
|||||||| | ||| ||||||||||||||||||| |||||| |||| |||||| |
|
|
| T |
24723329 |
agaaccttgcgatcaatcaatctaaggtaagggtgggactaactttctctaat |
24723381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 28476730 - 28476774
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||||||| ||| |||||||||| ||||| |
|
|
| T |
28476730 |
aatctaaggtaagggtgggactagatttctctaataatgagttgt |
28476774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1186 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1186
Description:
Target: scaffold1186; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 2082 - 2032
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
2082 |
tcgatcaatctaaggtaagggtgagactagctttctctaataatgggttgt |
2032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 186186 - 186236
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
186186 |
tcgatcaatctaaggtaagggtgagactagctttctctaataatgggttgt |
186236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0676 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0676
Description:
Target: scaffold0676; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 2937 - 2893
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
2937 |
aatctaaggtaagggtgggactagctttctctaataatgggttgt |
2893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0220 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0220
Description:
Target: scaffold0220; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 14005 - 13961
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
14005 |
aatctaaggtaagggtgggactagctttctctaataatgggttgt |
13961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 146805 - 146757
Alignment:
| Q |
8 |
cagagaagagaacctttcaatcgatcaatctaaggtaagggtcggacta |
56 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
146805 |
cagagaaaagaacctttcaatcgatcaatctaaggtatgggtgggacta |
146757 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0594 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0594
Description:
Target: scaffold0594; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 2309 - 2259
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||| ||||||||||||||||| ||||||||||| | |||||||||||||| |
|
|
| T |
2309 |
tcgaccaatctaaggtaagggtgggactagctttctataataatgggttgt |
2259 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0108 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0108
Description:
Target: scaffold0108; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 6492 - 6430
Alignment:
| Q |
16 |
agaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||| | ||| ||||||||||||||||||| |||||||||| |||||||||| ||||| |
|
|
| T |
6492 |
agaaccttgcgatcaatcaatctaaggtaagggtaagactagctttctctaataatgagttgt |
6430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0149 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0149
Description:
Target: scaffold0149; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 21674 - 21633
Alignment:
| Q |
27 |
atcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
21674 |
atcgatcaatctaaggtaagggtgggactagctttctctaat |
21633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0139 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0139
Description:
Target: scaffold0139; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 23587 - 23546
Alignment:
| Q |
37 |
ctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
23587 |
ctaaggtaagggtaggactagctttctctaataatgggttgt |
23546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0048 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0048
Description:
Target: scaffold0048; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 68719 - 68764
Alignment:
| Q |
31 |
atcaatctaaggtaagggtcggactagctttttctaataatgggtt |
76 |
Q |
| |
|
||||||||||||||||||| |||||| |||| |||||||||||||| |
|
|
| T |
68719 |
atcaatctaaggtaagggtgggactacctttctctaataatgggtt |
68764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0878 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0878
Description:
Target: scaffold0878; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 3418 - 3462
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||| ||||| |
|
|
| T |
3418 |
aatctaaggtaagggtgggactagctttctctaataatgcgttgt |
3462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0853 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0853
Description:
Target: scaffold0853; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 2454 - 2494
Alignment:
| Q |
38 |
taaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
2454 |
taaggtaagggtgggactagctttctctaataatgggttgt |
2494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0431 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0431
Description:
Target: scaffold0431; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 5685 - 5645
Alignment:
| Q |
38 |
taaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
5685 |
taaggtaagggtgggactagctttctctaataatgggttgt |
5645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0328 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0328
Description:
Target: scaffold0328; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 18636 - 18680
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||| ||||| |
|
|
| T |
18636 |
aatctaaggtaagggtgggactagctttctctaataatgagttgt |
18680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0174 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0174
Description:
Target: scaffold0174; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 19912 - 19868
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||||||| ||| |||||||||||||||| |
|
|
| T |
19912 |
aatctaaggtaagggtaggactagatttctctaataatgggttgt |
19868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0174; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 5510 - 5466
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| |||||| |||| |||||||||| ||||| |
|
|
| T |
5510 |
aatctaaggtaagggtgggactacctttctctaataatgagttgt |
5466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0061 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0061
Description:
Target: scaffold0061; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 14582 - 14626
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
14582 |
aatctaaggtaagggtgagactagctttctctaataatgggttgt |
14626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0061; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 23640 - 23684
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
23640 |
aatctaaggtaagggtgagactagctttctctaataatgggttgt |
23684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0031 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0031
Description:
Target: scaffold0031; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 127339 - 127383
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||||| |||| |
|
|
| T |
127339 |
aatctaaggtaagggtgggactagctttctctaataatggattgt |
127383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0098 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0098
Description:
Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 40169 - 40119
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||||||| | ||||| |||| |||||||||||||||| |
|
|
| T |
40169 |
tcgatcaatctaaggtaaggatgcgactaactttctctaataatgggttgt |
40119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0205 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0205
Description:
Target: scaffold0205; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 5609 - 5653
Alignment:
| Q |
31 |
atcaatctaaggtaagggtcggactagctttttctaataatgggtt |
76 |
Q |
| |
|
||||||||||||||||||| |||||||| || |||||||||||||| |
|
|
| T |
5609 |
atcaatctaaggtaagggtgggactagc-ttctctaataatgggtt |
5653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0086 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0086
Description:
Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 35181 - 35226
Alignment:
| Q |
33 |
caatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
||||||||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
35181 |
caatctaaggtaagggtggtactagctttccctaataatgggttgt |
35226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0037 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0037
Description:
Target: scaffold0037; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 112943 - 112996
Alignment:
| Q |
15 |
gagaacctttcaatcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
||||| ||||| ||||||||||||||| ||||||| |||||| |||| |||||| |
|
|
| T |
112943 |
gagaagctttcgatcgatcaatctaagataagggtgggactaactttctctaat |
112996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1941 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1941
Description:
Target: scaffold1941; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 200 - 160
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||| |||||| |
|
|
| T |
200 |
tcgatcaatctaaggtaagggtgggactaactttctctaat |
160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0802 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0802
Description:
Target: scaffold0802; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 4699 - 4739
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||| |||||| |
|
|
| T |
4699 |
tcgatcaatctaaggtaagggtgggactaactttctctaat |
4739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0555 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0555
Description:
Target: scaffold0555; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 8742 - 8786
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
8742 |
aatctaaggtaagggtgagactagcttactctaataatgggttgt |
8786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0414 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0414
Description:
Target: scaffold0414; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 11160 - 11200
Alignment:
| Q |
38 |
taaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||| | ||||||||||| |||||||||||||||| |
|
|
| T |
11160 |
taaggtaaggatgggactagctttctctaataatgggttgt |
11200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0379 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0379
Description:
Target: scaffold0379; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 10999 - 10959
Alignment:
| Q |
38 |
taaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||||||| | ||||||||| |||||||||||||||| |
|
|
| T |
10999 |
taaggtaagggtggaactagctttctctaataatgggttgt |
10959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0241 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0241
Description:
Target: scaffold0241; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 3244 - 3204
Alignment:
| Q |
28 |
tcgatcaatctaaggtaagggtcggactagctttttctaat |
68 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||| |||||| |
|
|
| T |
3244 |
tcgatcaatctaaggtaagggttggactaactttctctaat |
3204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0148 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0148
Description:
Target: scaffold0148; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 8900 - 8856
Alignment:
| Q |
34 |
aatctaaggtaagggtcggactagctttttctaataatgggttgt |
78 |
Q |
| |
|
|||||||| ||||||| ||||||||||| ||||||||||| |||| |
|
|
| T |
8900 |
aatctaagttaagggtgggactagctttatctaataatggattgt |
8856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0028
Description:
Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 3030 - 3070
Alignment:
| Q |
16 |
agaacctttcaatcgatcaatctaaggtaagggtcggacta |
56 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||||| |||||| |
|
|
| T |
3030 |
agaaccttgcaatcgatcaatccaaggtaagggtgggacta |
3070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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