View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21682_high_4 (Length: 342)

Name: NF21682_high_4
Description: NF21682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21682_high_4
NF21682_high_4
[»] scaffold0061 (2 HSPs)
scaffold0061 (266-342)||(68514-68590)
scaffold0061 (9-72)||(68328-68392)
[»] chr8 (30 HSPs)
chr8 (266-342)||(21974142-21974218)
chr8 (266-342)||(21978252-21978328)
chr8 (266-342)||(43250246-43250322)
chr8 (268-342)||(14399053-14399127)
chr8 (268-342)||(21409945-21410019)
chr8 (268-342)||(21804437-21804511)
chr8 (9-81)||(22110936-22111009)
chr8 (9-81)||(43250696-43250769)
chr8 (9-81)||(21973689-21973762)
chr8 (9-70)||(21977780-21977842)
chr8 (265-342)||(23427870-23427945)
chr8 (265-342)||(23913309-23913384)
chr8 (265-342)||(44385793-44385868)
chr8 (264-342)||(21386203-21386279)
chr8 (7-81)||(18863811-18863889)
chr8 (7-81)||(30941271-30941349)
chr8 (266-308)||(21829430-21829472)
chr8 (9-64)||(21829139-21829195)
chr8 (28-74)||(15924297-15924344)
chr8 (266-308)||(22110668-22110710)
chr8 (268-308)||(18864076-18864116)
chr8 (268-308)||(30941536-30941576)
chr8 (35-75)||(20983485-20983525)
chr8 (18-81)||(38550618-38550681)
chr8 (312-342)||(18864109-18864139)
chr8 (312-342)||(21829465-21829495)
chr8 (312-342)||(30941569-30941599)
chr8 (48-81)||(21977839-21977872)
chr8 (40-81)||(38550705-38550746)
chr8 (35-75)||(20983551-20983591)
[»] chr7 (70 HSPs)
chr7 (266-342)||(31769-31845)
chr7 (266-342)||(12706081-12706157)
chr7 (266-342)||(12713584-12713660)
chr7 (266-342)||(12717331-12717407)
chr7 (266-342)||(12722242-12722318)
chr7 (266-342)||(16908468-16908544)
chr7 (266-342)||(18278038-18278114)
chr7 (266-342)||(18282002-18282078)
chr7 (268-342)||(2833442-2833516)
chr7 (268-342)||(15083270-15083344)
chr7 (268-342)||(39721240-39721314)
chr7 (9-81)||(31994-32067)
chr7 (9-81)||(12713809-12713882)
chr7 (9-81)||(12717633-12717706)
chr7 (9-81)||(12722544-12722617)
chr7 (265-342)||(25928330-25928406)
chr7 (268-342)||(2531293-2531367)
chr7 (268-342)||(7520176-7520250)
chr7 (265-342)||(20486786-20486861)
chr7 (265-342)||(10607280-10607355)
chr7 (264-342)||(9752466-9752542)
chr7 (264-342)||(18301395-18301471)
chr7 (265-342)||(16582465-16582540)
chr7 (28-81)||(2833200-2833253)
chr7 (28-81)||(18278264-18278317)
chr7 (28-81)||(18282227-18282280)
chr7 (289-342)||(26291201-26291254)
chr7 (9-65)||(18278344-18278401)
chr7 (264-342)||(1859979-1860056)
chr7 (264-342)||(13919370-13919447)
chr7 (7-81)||(45171207-45171285)
chr7 (266-308)||(72341-72383)
chr7 (266-308)||(76450-76492)
chr7 (28-81)||(2531050-2531104)
chr7 (9-66)||(18282306-18282364)
chr7 (28-81)||(26291374-26291428)
chr7 (9-64)||(71970-72026)
chr7 (9-64)||(76079-76135)
chr7 (9-72)||(12705815-12705879)
chr7 (295-342)||(39268301-39268348)
chr7 (29-66)||(18282274-18282311)
chr7 (298-342)||(11660326-11660370)
chr7 (298-342)||(13891674-13891718)
chr7 (268-308)||(45171472-45171512)
chr7 (29-66)||(18278311-18278348)
chr7 (35-75)||(6170760-6170800)
chr7 (302-342)||(13892057-13892097)
chr7 (22-81)||(15112352-15112412)
chr7 (22-81)||(15115924-15115984)
chr7 (37-73)||(18424601-18424637)
chr7 (37-73)||(18424714-18424750)
chr7 (33-81)||(25928194-25928242)
chr7 (35-81)||(6170826-6170872)
chr7 (35-81)||(9390377-9390423)
chr7 (28-81)||(16582665-16582719)
chr7 (300-342)||(18424279-18424321)
chr7 (312-342)||(45171505-45171535)
chr7 (33-66)||(2833173-2833206)
chr7 (40-81)||(8467864-8467905)
chr7 (40-81)||(10502048-10502089)
chr7 (36-73)||(10607142-10607179)
chr7 (40-81)||(14270754-14270795)
chr7 (40-81)||(17231859-17231900)
chr7 (40-81)||(17231924-17231965)
chr7 (40-81)||(17231989-17232030)
chr7 (40-81)||(17232054-17232095)
chr7 (298-342)||(14420831-14420875)
chr7 (298-342)||(16005048-16005092)
chr7 (298-342)||(18606382-18606426)
chr7 (298-342)||(18871341-18871385)
[»] chr6 (44 HSPs)
chr6 (266-342)||(8242456-8242532)
chr6 (266-342)||(11565445-11565521)
chr6 (266-342)||(12620292-12620368)
chr6 (266-342)||(22861799-22861875)
chr6 (266-342)||(23988347-23988423)
chr6 (265-342)||(11716898-11716975)
chr6 (268-342)||(27555583-27555657)
chr6 (9-81)||(8242759-8242832)
chr6 (9-81)||(11565747-11565820)
chr6 (9-81)||(12619990-12620063)
chr6 (9-81)||(23988845-23988918)
chr6 (10-81)||(22948002-22948074)
chr6 (10-81)||(22951958-22952030)
chr6 (10-81)||(23870446-23870518)
chr6 (10-81)||(23874402-23874474)
chr6 (268-342)||(22075347-22075425)
chr6 (265-340)||(2076332-2076405)
chr6 (264-342)||(18918539-18918615)
chr6 (4-72)||(14471234-14471303)
chr6 (289-342)||(23400722-23400775)
chr6 (7-81)||(19869481-19869559)
chr6 (7-81)||(23393935-23394013)
chr6 (7-81)||(23413843-23413921)
chr6 (264-342)||(14470925-14471001)
chr6 (28-81)||(1643552-1643606)
chr6 (266-308)||(22947734-22947776)
chr6 (266-308)||(22951690-22951732)
chr6 (266-308)||(23870178-23870220)
chr6 (266-308)||(23874134-23874176)
chr6 (33-81)||(22075110-22075158)
chr6 (9-64)||(16759139-16759195)
chr6 (264-317)||(1643321-1643372)
chr6 (266-308)||(16758782-16758824)
chr6 (28-81)||(18918416-18918469)
chr6 (289-342)||(18953465-18953518)
chr6 (268-308)||(19869254-19869294)
chr6 (268-308)||(23393708-23393748)
chr6 (268-308)||(23413616-23413656)
chr6 (33-75)||(22075077-22075119)
chr6 (37-73)||(16623154-16623190)
chr6 (53-81)||(18953242-18953270)
chr6 (298-342)||(23538025-23538069)
chr6 (298-342)||(27222876-27222920)
chr6 (300-340)||(31479455-31479495)
[»] chr5 (40 HSPs)
chr5 (266-342)||(19474131-19474207)
chr5 (266-342)||(20294558-20294634)
chr5 (268-342)||(18354841-18354915)
chr5 (275-341)||(24768530-24768596)
chr5 (7-81)||(19473830-19473905)
chr5 (9-81)||(20294786-20294859)
chr5 (264-342)||(20912211-20912287)
chr5 (264-342)||(15238076-15238152)
chr5 (265-342)||(22108409-22108484)
chr5 (28-81)||(18355055-18355108)
chr5 (7-72)||(11226427-11226493)
chr5 (28-81)||(24768237-24768290)
chr5 (264-342)||(40727358-40727434)
chr5 (265-342)||(22120551-22120626)
chr5 (7-81)||(11219849-11219927)
chr5 (7-81)||(11224435-11224513)
chr5 (7-81)||(11230247-11230325)
chr5 (7-61)||(18355179-18355234)
chr5 (9-61)||(40727069-40727122)
chr5 (13-81)||(11228257-11228329)
chr5 (268-308)||(11219622-11219662)
chr5 (268-308)||(11224208-11224248)
chr5 (268-308)||(11226224-11226264)
chr5 (268-308)||(11228030-11228070)
chr5 (268-308)||(11230020-11230060)
chr5 (41-81)||(20912104-20912144)
chr5 (33-73)||(22108196-22108236)
chr5 (35-81)||(5889817-5889863)
chr5 (300-342)||(10751861-10751903)
chr5 (28-73)||(22120335-22120381)
chr5 (35-67)||(5889886-5889918)
chr5 (298-342)||(19510506-19510550)
chr5 (36-80)||(20912132-20912176)
chr5 (298-342)||(22339056-22339100)
chr5 (298-342)||(23113393-23113437)
chr5 (298-342)||(28372072-28372116)
chr5 (298-342)||(37599999-37600043)
chr5 (298-342)||(38146409-38146453)
chr5 (301-337)||(39362991-39363027)
chr5 (298-342)||(41878642-41878686)
[»] chr4 (43 HSPs)
chr4 (266-342)||(9555113-9555189)
chr4 (266-342)||(14758950-14759026)
chr4 (266-342)||(14955718-14955794)
chr4 (266-342)||(17807098-17807174)
chr4 (266-342)||(25688486-25688562)
chr4 (266-342)||(4562732-4562808)
chr4 (266-342)||(5758414-5758490)
chr4 (266-342)||(33740880-33740956)
chr4 (268-342)||(20158408-20158482)
chr4 (268-342)||(20161084-20161158)
chr4 (268-342)||(20163859-20163933)
chr4 (266-342)||(12486315-12486388)
chr4 (9-81)||(4562433-4562506)
chr4 (9-81)||(9555415-9555488)
chr4 (9-81)||(14758574-14758647)
chr4 (9-81)||(14955339-14955412)
chr4 (9-81)||(33741185-33741258)
chr4 (10-81)||(25688788-25688860)
chr4 (264-342)||(23996925-23997001)
chr4 (268-342)||(10711869-10711943)
chr4 (268-342)||(10925639-10925713)
chr4 (265-342)||(12422987-12423062)
chr4 (265-342)||(17052405-17052480)
chr4 (9-81)||(5757958-5758031)
chr4 (264-342)||(631706-631782)
chr4 (264-342)||(22634885-22634961)
chr4 (264-342)||(27532796-27532872)
chr4 (7-81)||(12486537-12486615)
chr4 (295-342)||(13813820-13813867)
chr4 (295-342)||(13818308-13818355)
chr4 (28-81)||(27532942-27532995)
chr4 (298-342)||(24048375-24048419)
chr4 (7-81)||(631561-631636)
chr4 (35-81)||(15189737-15189783)
chr4 (35-81)||(15189770-15189816)
chr4 (37-73)||(15223912-15223948)
chr4 (300-342)||(15223590-15223632)
chr4 (35-80)||(12423189-12423234)
chr4 (40-81)||(15481998-15482039)
chr4 (40-81)||(19857007-19857048)
chr4 (298-342)||(15533263-15533307)
chr4 (298-342)||(18211648-18211692)
chr4 (298-342)||(49549073-49549117)
[»] chr3 (72 HSPs)
chr3 (266-342)||(7108282-7108358)
chr3 (266-342)||(7112217-7112293)
chr3 (266-342)||(11068657-11068733)
chr3 (266-342)||(22320173-22320249)
chr3 (266-342)||(22335228-22335304)
chr3 (266-342)||(55021420-55021496)
chr3 (266-342)||(11167052-11167128)
chr3 (266-342)||(14497991-14498067)
chr3 (266-342)||(15616221-15616297)
chr3 (266-342)||(28948505-28948581)
chr3 (268-342)||(5219891-5219965)
chr3 (268-342)||(11853750-11853824)
chr3 (268-342)||(37440641-37440715)
chr3 (268-342)||(11301626-11301700)
chr3 (268-342)||(14664469-14664543)
chr3 (268-342)||(14667633-14667707)
chr3 (7-81)||(11069036-11069111)
chr3 (9-81)||(7108584-7108657)
chr3 (9-81)||(7112519-7112592)
chr3 (9-81)||(14498293-14498366)
chr3 (9-81)||(15616523-15616596)
chr3 (9-81)||(22320552-22320625)
chr3 (9-81)||(22335607-22335680)
chr3 (9-81)||(28948730-28948803)
chr3 (9-81)||(30064735-30064808)
chr3 (9-81)||(55021873-55021946)
chr3 (265-342)||(16795547-16795622)
chr3 (9-81)||(11166676-11166749)
chr3 (267-342)||(12853325-12853398)
chr3 (7-81)||(14067672-14067747)
chr3 (289-342)||(18933337-18933390)
chr3 (289-342)||(30064429-30064482)
chr3 (33-81)||(11301389-11301437)
chr3 (264-342)||(4590119-4590195)
chr3 (264-340)||(14068021-14068095)
chr3 (33-81)||(14664735-14664783)
chr3 (33-81)||(14667899-14667947)
chr3 (265-342)||(14670070-14670142)
chr3 (264-342)||(15463922-15463999)
chr3 (7-81)||(15963791-15963869)
chr3 (7-81)||(15967715-15967793)
chr3 (7-81)||(15971639-15971717)
chr3 (264-342)||(17318468-17318544)
chr3 (266-308)||(4112607-4112649)
chr3 (4-64)||(4108382-4108443)
chr3 (267-308)||(4108759-4108800)
chr3 (4-64)||(4112234-4112295)
chr3 (292-342)||(12337300-12337348)
chr3 (37-81)||(4589893-4589936)
chr3 (268-308)||(15963564-15963604)
chr3 (268-308)||(15967488-15967528)
chr3 (268-308)||(15971412-15971452)
chr3 (33-81)||(14067732-14067777)
chr3 (35-81)||(18440583-18440629)
chr3 (35-81)||(19485657-19485703)
chr3 (35-81)||(49390328-49390374)
chr3 (301-342)||(10834935-10834976)
chr3 (265-342)||(14681594-14681664)
chr3 (298-342)||(8928858-8928902)
chr3 (298-342)||(13435862-13435906)
chr3 (37-73)||(16751580-16751616)
chr3 (37-73)||(19774548-19774584)
chr3 (35-81)||(18440505-18440551)
chr3 (35-81)||(19485579-19485625)
chr3 (301-342)||(16751895-16751936)
chr3 (298-342)||(3802014-3802058)
chr3 (264-311)||(8490350-8490395)
chr3 (298-342)||(14764786-14764830)
chr3 (298-342)||(20249840-20249884)
chr3 (53-81)||(27410959-27410987)
chr3 (298-342)||(29545929-29545973)
chr3 (298-342)||(54519641-54519685)
[»] chr2 (29 HSPs)
chr2 (266-342)||(24630006-24630082)
chr2 (266-342)||(24645195-24645271)
chr2 (266-342)||(24647971-24648047)
chr2 (266-342)||(27600415-27600491)
chr2 (266-342)||(30346616-30346692)
chr2 (266-342)||(10103255-10103331)
chr2 (266-342)||(12902565-12902641)
chr2 (266-342)||(27380952-27381028)
chr2 (266-342)||(27384922-27384998)
chr2 (268-342)||(31343961-31344035)
chr2 (9-81)||(10102956-10103029)
chr2 (9-81)||(24629627-24629700)
chr2 (9-81)||(27600717-27600790)
chr2 (9-81)||(30346163-30346236)
chr2 (9-81)||(27384546-27384619)
chr2 (9-79)||(27380500-27380571)
chr2 (265-342)||(9784038-9784113)
chr2 (28-81)||(31344221-31344274)
chr2 (7-81)||(41532149-41532227)
chr2 (7-81)||(1282318-1282396)
chr2 (9-72)||(24648249-24648313)
chr2 (268-308)||(41532414-41532454)
chr2 (312-342)||(41532447-41532477)
chr2 (298-342)||(6481828-6481872)
chr2 (298-342)||(6485295-6485339)
chr2 (298-342)||(19663548-19663592)
chr2 (298-342)||(20260301-20260345)
chr2 (298-342)||(21074498-21074542)
chr2 (314-342)||(24647138-24647166)
[»] chr1 (35 HSPs)
chr1 (266-342)||(1009306-1009382)
chr1 (266-342)||(1926754-1926830)
chr1 (266-342)||(16376774-16376850)
chr1 (266-342)||(20925768-20925844)
chr1 (266-342)||(52634312-52634388)
chr1 (268-342)||(33796077-33796151)
chr1 (9-81)||(1009608-1009681)
chr1 (9-81)||(1926301-1926374)
chr1 (9-81)||(16376552-16376625)
chr1 (9-81)||(20925315-20925388)
chr1 (9-81)||(52634694-52634767)
chr1 (265-342)||(22132058-22132133)
chr1 (28-81)||(33796291-33796344)
chr1 (264-342)||(21406297-21406373)
chr1 (265-342)||(41801238-41801313)
chr1 (289-342)||(20230120-20230173)
chr1 (27-81)||(21406553-21406608)
chr1 (7-73)||(33796436-33796503)
chr1 (28-81)||(20229941-20229995)
chr1 (35-81)||(28195107-28195153)
chr1 (35-81)||(35982340-35982386)
chr1 (40-81)||(21740484-21740525)
chr1 (22-81)||(12271028-12271088)
chr1 (37-73)||(39244891-39244927)
chr1 (37-73)||(39248446-39248482)
chr1 (37-73)||(41389339-41389375)
chr1 (33-81)||(41801091-41801139)
chr1 (300-342)||(39245163-39245205)
chr1 (300-342)||(39248718-39248760)
chr1 (300-342)||(41389657-41389699)
chr1 (40-81)||(20315609-20315650)
chr1 (40-81)||(41306242-41306283)
chr1 (298-342)||(16370969-16371013)
chr1 (35-75)||(21740349-21740389)
chr1 (33-81)||(41801124-41801171)
[»] scaffold0372 (2 HSPs)
scaffold0372 (266-342)||(6279-6355)
scaffold0372 (9-80)||(6167-6239)
[»] scaffold0028 (1 HSPs)
scaffold0028 (266-342)||(60283-60360)
[»] scaffold0349 (2 HSPs)
scaffold0349 (266-342)||(11095-11170)
scaffold0349 (9-81)||(11402-11475)
[»] scaffold1852 (1 HSPs)
scaffold1852 (268-342)||(781-855)
[»] scaffold0410 (1 HSPs)
scaffold0410 (268-342)||(14888-14962)
[»] scaffold0166 (2 HSPs)
scaffold0166 (275-341)||(11027-11093)
scaffold0166 (28-81)||(10734-10787)
[»] scaffold0486 (2 HSPs)
scaffold0486 (268-342)||(8621-8695)
scaffold0486 (33-81)||(8885-8933)
[»] scaffold0157 (2 HSPs)
scaffold0157 (266-342)||(34089-34162)
scaffold0157 (7-81)||(33862-33940)
[»] scaffold0023 (1 HSPs)
scaffold0023 (268-342)||(11821-11895)
[»] scaffold0293 (2 HSPs)
scaffold0293 (265-342)||(21298-21374)
scaffold0293 (33-81)||(21162-21210)
[»] scaffold0575 (2 HSPs)
scaffold0575 (265-342)||(6920-6995)
scaffold0575 (33-81)||(6842-6889)
[»] scaffold0124 (2 HSPs)
scaffold0124 (264-342)||(25526-25602)
scaffold0124 (35-80)||(25446-25491)
[»] scaffold0029 (5 HSPs)
scaffold0029 (4-66)||(79475-79538)
scaffold0029 (28-81)||(79428-79481)
scaffold0029 (289-342)||(62821-62874)
scaffold0029 (28-81)||(62568-62621)
scaffold0029 (28-81)||(66484-66537)
[»] scaffold0525 (2 HSPs)
scaffold0525 (9-81)||(5006-5079)
scaffold0525 (264-342)||(5489-5565)
[»] scaffold0142 (2 HSPs)
scaffold0142 (265-341)||(8699-8773)
scaffold0142 (12-66)||(8445-8500)
[»] scaffold0327 (3 HSPs)
scaffold0327 (33-81)||(19128-19176)
scaffold0327 (33-81)||(19232-19280)
scaffold0327 (265-342)||(18867-18942)
[»] scaffold0200 (3 HSPs)
scaffold0200 (33-81)||(11061-11109)
scaffold0200 (268-308)||(10834-10874)
scaffold0200 (28-81)||(11094-11148)
[»] scaffold0380 (3 HSPs)
scaffold0380 (264-342)||(4018-4094)
scaffold0380 (28-81)||(955-1009)
scaffold0380 (264-307)||(1-42)
[»] scaffold0013 (2 HSPs)
scaffold0013 (265-342)||(74291-74366)
scaffold0013 (28-67)||(74077-74117)
[»] scaffold0141 (3 HSPs)
scaffold0141 (7-81)||(15281-15359)
scaffold0141 (268-308)||(15546-15586)
scaffold0141 (312-342)||(15579-15609)
[»] scaffold0109 (1 HSPs)
scaffold0109 (289-342)||(37179-37232)
[»] scaffold0299 (1 HSPs)
scaffold0299 (292-342)||(5869-5917)
[»] scaffold0031 (1 HSPs)
scaffold0031 (265-342)||(37161-37237)
[»] scaffold0080 (2 HSPs)
scaffold0080 (298-342)||(28516-28560)
scaffold0080 (298-342)||(33981-34025)
[»] scaffold0484 (1 HSPs)
scaffold0484 (7-64)||(76-134)
[»] scaffold1873 (1 HSPs)
scaffold1873 (264-327)||(691-753)
[»] scaffold0601 (2 HSPs)
scaffold0601 (35-73)||(8555-8593)
scaffold0601 (35-81)||(8621-8667)
[»] scaffold0278 (1 HSPs)
scaffold0278 (40-81)||(6963-7004)
[»] scaffold0116 (2 HSPs)
scaffold0116 (40-81)||(44439-44480)
scaffold0116 (40-81)||(44504-44545)
[»] scaffold0043 (1 HSPs)
scaffold0043 (40-81)||(9072-9113)
[»] scaffold0001 (1 HSPs)
scaffold0001 (298-335)||(153803-153840)
[»] scaffold1427 (1 HSPs)
scaffold1427 (298-342)||(244-288)
[»] scaffold0842 (1 HSPs)
scaffold0842 (298-342)||(5286-5330)
[»] scaffold0337 (1 HSPs)
scaffold0337 (298-342)||(10812-10856)
[»] scaffold0026 (1 HSPs)
scaffold0026 (298-342)||(109645-109689)
[»] scaffold0012 (1 HSPs)
scaffold0012 (298-342)||(224133-224177)
[»] scaffold0004 (1 HSPs)
scaffold0004 (35-75)||(362226-362266)


Alignment Details
Target: scaffold0061 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 68514 - 68590
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  68514 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 68590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 68328 - 68392
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatata 72  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||    
T  68328 tggtgttagtatgtgttgattatattttcataagatgatgaatatgttgttgttatattattata 68392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 21974142 - 21974218
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21974142 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 21974218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 21978252 - 21978328
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21978252 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 21978328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 43250322 - 43250246
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  43250322 gatgattatattgtgttgttttaaagttattaatgatgatgattacatgatgatatctatgagttgttaagtgtact 43250246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 14399053 - 14399127
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14399053 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 14399127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 21410019 - 21409945
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21410019 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 21409945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 21804511 - 21804437
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21804511 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 21804437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 22111009 - 22110936
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  22111009 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 22110936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 43250769 - 43250696
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  43250769 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 43250696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 21973689 - 21973762
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||    
T  21973689 tggtgttagtatgtgttgattatattttcataagatgatgaataccttgttgttatattaatacaagaagatga 21973762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 21977780 - 21977842
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaata 70  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21977780 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaata 21977842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 265 - 342
Target Start/End: Complemental strand, 23427945 - 23427870
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  23427945 tgatgattatattgtgttgtct--aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 23427870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 265 - 342
Target Start/End: Complemental strand, 23913384 - 23913309
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  23913384 tgatgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctataagttgttaaatgtact 23913309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 265 - 342
Target Start/End: Original strand, 44385793 - 44385868
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||  ||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  44385793 tgatgattatattgtgttgttt--aagttgttagtgatgatgattacatgatgttatctatgagttgttaaatgtact 44385868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 21386279 - 21386203
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||    
T  21386279 gtgatgattatattgtgtagttt--aagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtact 21386203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 18863811 - 18863889
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  18863811 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 18863889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 30941271 - 30941349
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  30941271 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 30941349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 21829430 - 21829472
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  21829430 gatgattatattgtgttgttttaaagttattagtgatgatgat 21829472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 21829139 - 21829195
Alignment:
Q  9 tggtgttagtatgtgttgattata-ttttataagatgatgaatacgttgttgttata 64  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||    
T  21829139 tggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttattata 21829195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 15924297 - 15924344
Alignment:
Q  28 ttatatttt-ataagatgatgaatacgttgttgttatattaatataag 74  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15924297 ttatattttcataagatgatgaatacgttgttgttatattaatataag 15924344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 22110710 - 22110668
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  22110710 gatgattatattatgttgttttaaagttattagtgatgatgat 22110668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 18864076 - 18864116
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  18864076 tgattacattgtgttgttttaaagttattagtgatgatgat 18864116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 30941536 - 30941576
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  30941536 tgattacattgtgttgttttaaagttattagtgatgatgat 30941576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 20983485 - 20983525
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataaga 75  Q
    ||||||||||||||||| ||||||||||||||| |||||||    
T  20983485 ttataagatgatgaatatgttgttgttatattattataaga 20983525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 38550618 - 38550681
Alignment:
Q  18 tatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||| ||||||||| || |||||||||||| ||||||||||||||| ||||||| |||||    
T  38550618 tatgtgttg-ttatattttgatgagatgatgaatatgttgttgttatattattataagatgatga 38550681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 342
Target Start/End: Original strand, 18864109 - 18864139
Alignment:
Q  312 atgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||    
T  18864109 atgatgatatctatgagttgttaagtgtact 18864139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 342
Target Start/End: Original strand, 21829465 - 21829495
Alignment:
Q  312 atgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||    
T  21829465 atgatgatatctatgagttgttaagtgtact 21829495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 342
Target Start/End: Original strand, 30941569 - 30941599
Alignment:
Q  312 atgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||    
T  30941569 atgatgatatctatgagttgttaagtgtact 30941599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 21977839 - 21977872
Alignment:
Q  48 aatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||||||| ||||||||||    
T  21977839 aatacgttgttgttatattaatacaagaagatga 21977872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 38550705 - 38550746
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  38550705 agatgatgaatatgttgttgttatattattataagatgatga 38550746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 20983551 - 20983591
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataaga 75  Q
    ||||||||||||||||| ||||| ||||||||| |||||||    
T  20983551 ttataagatgatgaatatgttgtggttatattattataaga 20983591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 1e-35; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 31845 - 31769
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31845 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 31769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 12706081 - 12706157
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12706081 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 12706157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 12713660 - 12713584
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12713660 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 12713584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 12717407 - 12717331
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12717407 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 12717331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 12722318 - 12722242
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12722318 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 12722242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 16908468 - 16908544
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16908468 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 16908544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 18278114 - 18278038
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18278114 gatgattatattgtgttgttttaaagttattagtgatgatgattgcatgatgatatctatgagttgttaagtgtact 18278038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 18282078 - 18282002
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18282078 gatgattatattgtgttgttttaaagtttttagtgatgatgattacatgatgatatctatgagttgttaagtgtact 18282002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 2833442 - 2833516
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2833442 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 2833516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 15083344 - 15083270
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15083344 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 15083270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 39721314 - 39721240
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  39721314 tgattacattgtgttgttttaaagttattagtaatgatgattacatgatgatatctatgagttgttaaatgtact 39721240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 32067 - 31994
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  32067 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 31994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 12713882 - 12713809
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  12713882 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 12713809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 12717706 - 12717633
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  12717706 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 12717633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 12722617 - 12722544
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  12722617 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 12722544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 265 - 342
Target Start/End: Original strand, 25928330 - 25928406
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  25928330 tgatgattatattgtgttgttt-aaagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 25928406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 2531293 - 2531367
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||    
T  2531293 tgattacattgtgttgttttaaagttattagtgatgatgattatatgaagatatctatgagttgttaggtgtact 2531367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 7520176 - 7520250
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||    
T  7520176 tgattacattgtgttgttttaaagttatcagtgatgatgattacatgatgttatctatgagttgttaaatgtact 7520250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 265 - 342
Target Start/End: Complemental strand, 20486861 - 20486786
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  20486861 tgatgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 20486786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 265 - 342
Target Start/End: Original strand, 10607280 - 10607355
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||  || |||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  10607280 tgatgattatattgtgttgttt--aatttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 10607355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 9752466 - 9752542
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||| ||||||||||||||  ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  9752466 gtgatgatcatattgtgttgttt--aagttattagtgatgataattacatgatgttatctatgagttgttaaatgtact 9752542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 18301471 - 18301395
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||    
T  18301471 gtgacgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtact 18301395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 265 - 342
Target Start/End: Complemental strand, 16582540 - 16582465
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||  || |||||||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  16582540 tgatgattatattgtgttgttt--aatttattagtgatgatgattacatgatgttatttatgagttgttaaatgtact 16582465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 2833200 - 2833253
Alignment:
Q  28 ttatattttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  2833200 ttatattttataagatgatgaatacgttgttgttatattattataagaagatga 2833253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 18278317 - 18278264
Alignment:
Q  28 ttatattttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18278317 ttatattttataagatgatgaatacattgttgttatattaatataagaagatga 18278264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 18282280 - 18282227
Alignment:
Q  28 ttatattttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18282280 ttatattttataagatgatgaatacattgttgttatattaatataagaagatga 18282227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 26291254 - 26291201
Alignment:
Q  289 aagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26291254 aagttattagtgatgatgattacatgatgttatctatgagttgttaagtgtact 26291201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 18278401 - 18278344
Alignment:
Q  9 tggtgttagtatgtgttgattatattt-tataagatgatgaatacgttgttgttatat 65  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  18278401 tggtgttagtatgtgttgattatatttatataagatgatgaatacgttgttgctatat 18278344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 1859979 - 1860056
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgat-gatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||||| |||| ||| ||||||||||||| ||||||    
T  1859979 gtgatgattatattgtgttgttt--aagttattagtgattgatgattacaggatgttatatatgagttgttaaatgtact 1860056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 13919370 - 13919447
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgat-gatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||||| |||| ||| ||||||||||||| ||||||    
T  13919370 gtgatgattatattgtgttgttt--aagttattagtgattgatgattacaggatgttatatatgagttgttaaatgtact 13919447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 45171207 - 45171285
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  45171207 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 45171285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 72341 - 72383
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  72341 gatgattatattgtgttgttttaaagttattagtgatgatgat 72383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 76450 - 76492
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  76450 gatgattatattgtgttgttttaaagttattagtgatgatgat 76492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 2531050 - 2531104
Alignment:
Q  28 ttatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  2531050 ttatattttcataagatgatgattacgttgttgttatattaatataagaagatga 2531104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 18282364 - 18282306
Alignment:
Q  9 tggtgttagtatgtgttgattatattt-tataagatgatgaatacgttgttgttatatt 66  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||    
T  18282364 tggtgttagtatgtgttgattatatttatataagatgatgaatacgtcgttgctatatt 18282306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 26291428 - 26291374
Alignment:
Q  28 ttatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  26291428 ttatattttcataagatgatgaatacgttgttgttatattaatataagaaaatga 26291374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 71970 - 72026
Alignment:
Q  9 tggtgttagtatgtgttgattata-ttttataagatgatgaatacgttgttgttata 64  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||    
T  71970 tggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttattata 72026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 76079 - 76135
Alignment:
Q  9 tggtgttagtatgtgttgattata-ttttataagatgatgaatacgttgttgttata 64  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||    
T  76079 tggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttattata 76135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 12705815 - 12705879
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatata 72  Q
    |||||||||||||||||||||||||||| |||| | |||||||| ||||||||||||||| ||||    
T  12705815 tggtgttagtatgtgttgattatattttcataaaaagatgaatatgttgttgttatattattata 12705879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 295 - 342
Target Start/End: Original strand, 39268301 - 39268348
Alignment:
Q  295 ttagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  39268301 ttagtgatgatgattacatgatgttatctatgagttgttaaatgtact 39268348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 18282311 - 18282274
Alignment:
Q  29 tatattttataagatgatgaatacgttgttgttatatt 66  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18282311 tatattttataagatgatgaatacgttgttgttatatt 18282274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 11660370 - 11660326
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||    
T  11660370 gtgatgatgattacatgatgttatctatgagttgttaaatgtact 11660326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 13891718 - 13891674
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||    
T  13891718 gtgatgatgattacatgatgttatctatgagttgttaaatgtact 13891674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 45171472 - 45171512
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  45171472 tgattacattgtgttgttttaaagttattagtgatgatgat 45171512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 18278348 - 18278311
Alignment:
Q  29 tatattttataagatgatgaatacgttgttgttatatt 66  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  18278348 tatatcttataagatgatgaatacgttgttgttatatt 18278311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 6170760 - 6170800
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataaga 75  Q
    ||||||||||||||||| ||||||||||||||| |||||||    
T  6170760 ttataagatgatgaatatgttgttgttatattattataaga 6170800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 342
Target Start/End: Complemental strand, 13892097 - 13892057
Alignment:
Q  302 tgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||| ||||||||||||||||| ||||||    
T  13892097 tgatgattacatgatgttatctatgagttgttaaatgtact 13892057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 15112412 - 15112352
Alignment:
Q  22 tgttgattatatt-ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||| ||||||| ||||||||||||||||| ||||||||||||||| ||| ||| |||||    
T  15112412 tgttgcttatattattataagatgatgaatatgttgttgttatattattatgagatgatga 15112352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 15115984 - 15115924
Alignment:
Q  22 tgttgattatatt-ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||| ||||||| ||||||||||||||||| ||||||||||||||| ||| ||| |||||    
T  15115984 tgttgcttatattattataagatgatgaatatgttgttgttatattattatgagatgatga 15115924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 18424637 - 18424601
Alignment:
Q  37 ataagatgatgaatacgttgttgttatattaatataa 73  Q
    ||||||||||||||||||||||||||||||| |||||    
T  18424637 ataagatgatgaatacgttgttgttatattattataa 18424601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 18424750 - 18424714
Alignment:
Q  37 ataagatgatgaatacgttgttgttatattaatataa 73  Q
    ||||||||||||||||||||||||||||||| |||||    
T  18424750 ataagatgatgaatacgttgttgttatattattataa 18424714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 25928194 - 25928242
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||| ||||||||||||||  ||||||| |||||    
T  25928194 ttttataagatgatgaatatgttgttgttatatttttataagatgatga 25928242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 6170826 - 6170872
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||| |||||||| |||||| ||||||| |||||    
T  6170826 ttataagatgatgaatatgttgttgtcatattattataagatgatga 6170872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 9390377 - 9390423
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||| | ||||||||||||| ||||||| |||||    
T  9390377 ttataagatgatgaatatgatgttgttatattattataagatgatga 9390423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 16582719 - 16582665
Alignment:
Q  28 ttatattt-tataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||| ||||||||| |||||| ||||||||||||||| ||||||| |||||    
T  16582719 ttatatttctataagatggtgaatatgttgttgttatattattataagatgatga 16582665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 342
Target Start/End: Complemental strand, 18424321 - 18424279
Alignment:
Q  300 gatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||  ||||||||||||||||| ||||||    
T  18424321 gatgatgattacatgatattatctatgagttgttaaatgtact 18424279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 342
Target Start/End: Original strand, 45171505 - 45171535
Alignment:
Q  312 atgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||    
T  45171505 atgatgatatctatgagttgttaagtgtact 45171535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 2833173 - 2833206
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatatt 66  Q
    ||||||||||||||||||| ||||||||||||||    
T  2833173 ttttataagatgatgaatatgttgttgttatatt 2833206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 8467905 - 8467864
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  8467905 agatgatgaatatgttgttgttatattattataagatgatga 8467864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 10502048 - 10502089
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||| ||||| ||||||||||||||||||||||| |||||    
T  10502048 agatgaggaatatgttgttgttatattaatataagatgatga 10502089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 10607142 - 10607179
Alignment:
Q  36 tataagatgatgaatacgttgttgttatattaatataa 73  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  10607142 tataagatgatgaatatgttgttgttatattattataa 10607179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 14270754 - 14270795
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  14270754 agatgatgaatatgttgttgttatattattataagatgatga 14270795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 17231900 - 17231859
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  17231900 agatgatgaatatgttgttgttatattattataagatgatga 17231859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 17231965 - 17231924
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  17231965 agatgatgaatatgttgttgttatattattataagatgatga 17231924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 17232030 - 17231989
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  17232030 agatgatgaatatgttgttgttatattattataagatgatga 17231989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 17232095 - 17232054
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  17232095 agatgatgaatatgttgttgttatattattataagatgatga 17232054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 14420875 - 14420831
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  14420875 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 14420831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 16005092 - 16005048
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  16005092 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 16005048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 18606426 - 18606382
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  18606426 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 18606382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 18871385 - 18871341
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  18871385 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 18871341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 1e-35; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 8242532 - 8242456
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8242532 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 8242456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 11565521 - 11565445
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11565521 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 11565445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 12620292 - 12620368
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12620292 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 12620368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 22861875 - 22861799
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22861875 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 22861799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 23988423 - 23988347
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23988423 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 23988347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 265 - 342
Target Start/End: Original strand, 11716898 - 11716975
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11716898 tgatgtttatattgtgttgttttaaagttattaatgatgatgattacatgatgatatctatgagttgttaagtgtact 11716975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 27555657 - 27555583
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27555657 tgattacattgagttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 27555583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 8242832 - 8242759
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  8242832 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 8242759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 11565820 - 11565747
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  11565820 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 11565747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 12619990 - 12620063
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  12619990 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 12620063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 23988918 - 23988845
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  23988918 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 23988845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 22948074 - 22948002
Alignment:
Q  10 ggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  22948074 ggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 22948002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 22952030 - 22951958
Alignment:
Q  10 ggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  22952030 ggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 22951958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 23870518 - 23870446
Alignment:
Q  10 ggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  23870518 ggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 23870446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 23874474 - 23874402
Alignment:
Q  10 ggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  23874474 ggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 23874402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 22075347 - 22075425
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatg----atatctatgagttgttaagtgtact 342  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||    
T  22075347 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatatatctatgagttgttaagtgtact 22075425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 265 - 340
Target Start/End: Complemental strand, 2076405 - 2076332
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgta 340  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  2076405 tgatgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgta 2076332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 18918539 - 18918615
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||| | ||||  ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||    
T  18918539 gtgatgattatattgtatagttt--aagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtact 18918615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 14471303 - 14471234
Alignment:
Q  4 gactatggtgttagtatgtgttgattatatt-ttataagatgatgaatacgttgttgttatattaatata 72  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||| ||||||||||||||| ||||    
T  14471303 gactatggtgttagtatgtgttgattatattaatataagaagatgaatatgttgttgttatattattata 14471234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 23400775 - 23400722
Alignment:
Q  289 aagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  23400775 aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 23400722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 19869559 - 19869481
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  19869559 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 19869481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 23394013 - 23393935
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  23394013 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 23393935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 23413921 - 23413843
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  23413921 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 23413843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 14471001 - 14470925
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||| ||||  |||||||||||||||| ||||| |||| ||||| |||||||||||| |||||||    
T  14471001 gtgatgattatattgtgtagttt--aagttattagtgatgaagattatatgaagatatttatgagttgttaggtgtact 14470925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 1643606 - 1643552
Alignment:
Q  28 ttatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  1643606 ttatattttcataagatgatgaatacgttgttgttatattaatataaggagatga 1643552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 22947776 - 22947734
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22947776 gatgattatattgtgttgttttaaagttattagtgatgatgat 22947734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 22951732 - 22951690
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22951732 gatgattatattgtgttgttttaaagttattagtgatgatgat 22951690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 23870220 - 23870178
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23870220 gatgattatattgtgttgttttaaagttattagtgatgatgat 23870178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 23874176 - 23874134
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23874176 gatgattatattgtgttgttttaaagttattagtgatgatgat 23874134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 22075110 - 22075158
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||    
T  22075110 ttttataagatgattaatangttgttgttatattaatataagaagatga 22075158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 16759195 - 16759139
Alignment:
Q  9 tggtgttagtatgtgttgattata-ttttataagatgatgaatacgttgttgttata 64  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||    
T  16759195 tggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttattata 16759139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 1643372 - 1643321
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatg 317  Q
    |||||||||||||||||| ||||  |||||||||||||||||||||||||||||    
T  1643372 gtgatgattatattgtgtagttt--aagttattagtgatgatgattacatgatg 1643321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 16758824 - 16758782
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  16758824 gatgattatattgtgttgttttaaatttattagtgatgatgat 16758782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 18918416 - 18918469
Alignment:
Q  28 ttatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  18918416 ttatattttcataagatgatgaatacgttgttgttata-taatataagaagatga 18918469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 18953465 - 18953518
Alignment:
Q  289 aagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  18953465 aagttattagtgatgatgattacatgatgtcatctaggagttgttaaatgtact 18953518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 19869294 - 19869254
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  19869294 tgattacattgtgttgttttaaagttattagtgatgatgat 19869254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 23393748 - 23393708
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  23393748 tgattacattgtgttgttttaaagttattagtgatgatgat 23393708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 23413656 - 23413616
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  23413656 tgattacattgtgttgttttaaagttattagtgatgatgat 23413616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 22075077 - 22075119
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataaga 75  Q
    ||||||||||||||||||| ||||||||||||||  |||||||    
T  22075077 ttttataagatgatgaatatgttgttgttatatttttataaga 22075119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 16623190 - 16623154
Alignment:
Q  37 ataagatgatgaatacgttgttgttatattaatataa 73  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  16623190 ataagatgatgaatatgttgttgttatattattataa 16623154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 81
Target Start/End: Original strand, 18953242 - 18953270
Alignment:
Q  53 gttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||    
T  18953242 gttgttgttatattaatataagaagatga 18953270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 23538069 - 23538025
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||| |||||||||||||| | ||||||||||||||| ||||||    
T  23538069 gtgataatgattacatgatgttgtctatgagttgttaaatgtact 23538025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 27222920 - 27222876
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  27222920 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 27222876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 340
Target Start/End: Original strand, 31479455 - 31479495
Alignment:
Q  300 gatgatgattacatgatgatatctatgagttgttaagtgta 340  Q
    |||||||||||||||||  ||||||||||||||||| ||||    
T  31479455 gatgatgattacatgatattatctatgagttgttaaatgta 31479495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 19474131 - 19474207
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19474131 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 19474207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 20294634 - 20294558
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20294634 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 20294558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 18354915 - 18354841
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18354915 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 18354841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 275 - 341
Target Start/End: Original strand, 24768530 - 24768596
Alignment:
Q  275 attgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtac 341  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24768530 attgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtac 24768596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 19473830 - 19473905
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  19473830 tatggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 19473905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 20294859 - 20294786
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  20294859 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 20294786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 20912211 - 20912287
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20912211 gtgatgattatattgtattgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaagtgtact 20912287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 15238076 - 15238152
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  15238076 gtgatgattatattgtgtagttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 15238152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 265 - 342
Target Start/End: Original strand, 22108409 - 22108484
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||| |||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  22108409 tgatgattctattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 22108484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 18355108 - 18355055
Alignment:
Q  28 ttatattttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18355108 ttatattttataagatgatgaatacgttgttgttatattaatataagaagatga 18355055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 11226493 - 11226427
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatata 72  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||    
T  11226493 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttatattattata 11226427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 24768237 - 24768290
Alignment:
Q  28 ttatattttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24768237 ttatactttataagatgatgaatacgttgttgttatattaatataagaagatga 24768290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 40727358 - 40727434
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||||| ||||||||| |||||||  |||||||    
T  40727358 gtgatgattatattgtgtagttt--aagttattagtgatgatgattacatgaagatatctataagttgtttggtgtact 40727434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 265 - 342
Target Start/End: Original strand, 22120551 - 22120626
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||| |||  || ||||||||||||||||||| |||||| ||||||||||||||||| ||||||    
T  22120551 tgatgattatattgtgttattt--aatttattagtgatgatgattatatgatgttatctatgagttgttaaatgtact 22120626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 11219927 - 11219849
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgt---tgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||   |||||||||| |||| ||||||||    
T  11219927 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgctgttatattattatatgaagatga 11219849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 11224513 - 11224435
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgt---tgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||   |||||||||| |||| ||||||||    
T  11224513 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgctgttatattattatatgaagatga 11224435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 11230325 - 11230247
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgt---tgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||   |||||||||| |||| ||||||||    
T  11230325 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgctgttatattattatatgaagatga 11230247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 18355234 - 18355179
Alignment:
Q  7 tatggtgttagtatgtgttgattata-ttttataagatgatgaatacgttgttgtt 61  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  18355234 tatggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttgtt 18355179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 40727069 - 40727122
Alignment:
Q  9 tggtgttagtatgtgttgattata-ttttataagatgatgaatacgttgttgtt 61  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  40727069 tggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttgtt 40727122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 11228329 - 11228257
Alignment:
Q  13 gttagtatgtgttgattatatttt-ataagatgatgaatacgttgt---tgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||   |||||||||| |||| ||||||||    
T  11228329 gttagtatgtgttgattatattttgataagatgatgaatatgttgttgctgttatattattatatgaagatga 11228257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 11219662 - 11219622
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  11219662 tgattacattgtgttgttttaaagttattagtgatgatgat 11219622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 11224248 - 11224208
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  11224248 tgattacattgtgttgttttaaagttattagtgatgatgat 11224208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 11226264 - 11226224
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  11226264 tgattacattgtgttgttttaaagttattagtgatgatgat 11226224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 11228070 - 11228030
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  11228070 tgattacattgtgttgttttaaagttattagtgatgatgat 11228030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 11230060 - 11230020
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  11230060 tgattacattgtgttgttttaaagttattagtgatgatgat 11230020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 20912104 - 20912144
Alignment:
Q  41 gatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  20912104 gatgatgaatatattgttgttatattaatataagaagatga 20912144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 22108196 - 22108236
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataa 73  Q
    ||||||||||||||||||| ||||||||||||||| |||||    
T  22108196 ttttataagatgatgaatatgttgttgttatattattataa 22108236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 5889817 - 5889863
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||| | ||||||||||||| ||||||| |||||    
T  5889817 ttataagatgatgaatatgatgttgttatattattataagatgatga 5889863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 342
Target Start/End: Complemental strand, 10751903 - 10751861
Alignment:
Q  300 gatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||  ||||||||||||||||| ||||||    
T  10751903 gatgatgattacatgatattatctatgagttgttaaatgtact 10751861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 22120335 - 22120381
Alignment:
Q  28 ttatattt-tataagatgatgaatacgttgttgttatattaatataa 73  Q
    |||||||| |||||||||||||||| ||||||||||||||| |||||    
T  22120335 ttatatttctataagatgatgaatatgttgttgttatattattataa 22120381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 67
Target Start/End: Original strand, 5889886 - 5889918
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatatta 67  Q
    ||||||||||||||||| |||||||||||||||    
T  5889886 ttataagatgatgaatatgttgttgttatatta 5889918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 19510550 - 19510506
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  19510550 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 19510506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 20912132 - 20912176
Alignment:
Q  36 tataagatgatgaatacgttgttgttatattaatataagaagatg 80  Q
    ||||||| |||||||| ||||||||||||||| ||||||| ||||    
T  20912132 tataagaagatgaatatgttgttgttatattattataagatgatg 20912176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 22339100 - 22339056
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  22339100 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 22339056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 23113393 - 23113437
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  23113393 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 23113437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 28372072 - 28372116
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  28372072 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 28372116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 37599999 - 37600043
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  37599999 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 37600043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 38146409 - 38146453
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  38146409 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 38146453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 39363027 - 39362991
Alignment:
Q  301 atgatgattacatgatgatatctatgagttgttaagt 337  Q
    ||||||||||||||||| | |||||||||||||||||    
T  39363027 atgatgattacatgatgttgtctatgagttgttaagt 39362991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 41878642 - 41878686
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  41878642 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 41878686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 1e-35; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 9555189 - 9555113
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9555189 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 9555113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 14758950 - 14759026
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14758950 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 14759026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 14955718 - 14955794
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14955718 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 14955794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 17807174 - 17807098
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17807174 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 17807098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 25688562 - 25688486
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25688562 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 25688486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 4562732 - 4562808
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4562732 gatgattatattgggttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 4562808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 5758414 - 5758490
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5758414 gatgattctattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 5758490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 33740956 - 33740880
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33740956 gatgattatattgtgttgttttaaaattattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 33740880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 20158408 - 20158482
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20158408 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 20158482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 20161084 - 20161158
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20161084 tgattacattgtgttgttttaaagttattagtgatgacgattacatgatgatatctatgagttgttaagtgtact 20161158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 20163859 - 20163933
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20163859 tgattacattgtgttgttttaaagttattagtgatgacgattacatgatgatatctatgagttgttaagtgtact 20163933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 12486388 - 12486315
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  12486388 gatgattatattgtgttgttttaaagttattagtgatgat---tacatgatgatatctatgagttgttaagtgtact 12486315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 4562433 - 4562506
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  4562433 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 4562506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 9555488 - 9555415
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  9555488 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 9555415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 14758574 - 14758647
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  14758574 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 14758647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 14955339 - 14955412
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  14955339 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 14955412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 33741258 - 33741185
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  33741258 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 33741185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 25688860 - 25688788
Alignment:
Q  10 ggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  25688860 ggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 25688788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 23996925 - 23997001
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  23996925 gtgatgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 23997001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 10711943 - 10711869
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||    
T  10711943 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtact 10711869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 10925713 - 10925639
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||    
T  10925713 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtact 10925639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 265 - 342
Target Start/End: Complemental strand, 12423062 - 12422987
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  12423062 tgatgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 12422987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 265 - 342
Target Start/End: Original strand, 17052405 - 17052480
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  17052405 tgatgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 17052480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 5757958 - 5758031
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||    
T  5757958 tggtgttagtatgtgttgattatattttcataagatgatgaatatgttgttgttatattaatacaagaagatga 5758031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 631706 - 631782
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  631706 gtgacgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 631782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 22634885 - 22634961
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  22634885 gtgatgatcatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 22634961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 27532872 - 27532796
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||    
T  27532872 gtgatgattatattgtgtagttt--aagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtact 27532796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 12486615 - 12486537
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  12486615 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 12486537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 295 - 342
Target Start/End: Original strand, 13813820 - 13813867
Alignment:
Q  295 ttagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  13813820 ttagtgatgatgattacatgatgttatctatgagttgttaaatgtact 13813867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 295 - 342
Target Start/End: Original strand, 13818308 - 13818355
Alignment:
Q  295 ttagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  13818308 ttagtgatgatgattacatgatgttatctatgagttgttaaatgtact 13818355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 27532995 - 27532942
Alignment:
Q  28 ttatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  27532995 ttatattttcataagatgatgaatacgttgttgttata-taatataagaagatga 27532942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 24048375 - 24048419
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||    
T  24048375 gtgatgatgattacatgatgttatctatgagttgttaaatgtact 24048419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 631561 - 631636
Alignment:
Q  7 tatggtgttagtatgtgttgattatatt-ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||| ||||| |||||| || ||||||| |||||| |||||||||| ||||||||||||||| ||||| |||||||    
T  631561 tatgatgttattatgtgctgtttatattattataaaatgatgaatatgttgttgttatattattataaaaagatga 631636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 15189783 - 15189737
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  15189783 ttataagatgatgaatatgttgttgttatattattataagatgatga 15189737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 15189816 - 15189770
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  15189816 ttataagatgatgaatatgttgttgttatattattataagatgatga 15189770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 15223948 - 15223912
Alignment:
Q  37 ataagatgatgaatacgttgttgttatattaatataa 73  Q
    ||||||||||||||||||||||||||||||| |||||    
T  15223948 ataagatgatgaatacgttgttgttatattattataa 15223912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 342
Target Start/End: Complemental strand, 15223632 - 15223590
Alignment:
Q  300 gatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||  ||||||||||||||||| ||||||    
T  15223632 gatgatgattacatgatattatctatgagttgttaaatgtact 15223590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 12423234 - 12423189
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatg 80  Q
    |||||| |||||||||| ||||||||||||||| ||||||| ||||    
T  12423234 ttataaaatgatgaatatgttgttgttatattattataagacgatg 12423189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 15481998 - 15482039
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  15481998 agatgatgaatatgttgttgttatattattataagatgatga 15482039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 19857048 - 19857007
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  19857048 agatgatgaatatgttgttgttatattattataagatgatga 19857007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 15533307 - 15533263
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  15533307 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 15533263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 18211692 - 18211648
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  18211692 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 18211648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 49549073 - 49549117
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  49549073 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 49549117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 1e-35; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 7108358 - 7108282
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7108358 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 7108282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 7112293 - 7112217
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7112293 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 7112217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 11068733 - 11068657
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11068733 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 11068657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 22320249 - 22320173
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22320249 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 22320173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 22335304 - 22335228
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22335304 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 22335228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 55021496 - 55021420
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55021496 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 55021420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 11167052 - 11167128
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11167052 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtttact 11167128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 14498067 - 14497991
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14498067 gatgattatattgtgttgttttaaagttattagcgatgatgattacatgatgatatctatgagttgttaagtgtact 14497991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 15616297 - 15616221
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15616297 gatgattataatgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 15616221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 28948581 - 28948505
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28948581 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctataagttgttaagtgtact 28948505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 5219965 - 5219891
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5219965 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 5219891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 11853824 - 11853750
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11853824 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 11853750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 37440641 - 37440715
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37440641 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 37440715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 11301626 - 11301700
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11301626 tgattacattgtgttgttttaaagttattagtgatgatgattgcatgatgatatctatgagttgttaagtgtact 11301700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 14664543 - 14664469
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14664543 tgattacattgtgttgttttaaagttattagtgatgatgattacataatgatatctatgagttgttaagtgtact 14664469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 14667707 - 14667633
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14667707 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgagatctatgagttgttaagtgtact 14667633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 11069111 - 11069036
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  11069111 tatggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 11069036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 7108657 - 7108584
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  7108657 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 7108584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 7112592 - 7112519
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  7112592 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 7112519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 14498366 - 14498293
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  14498366 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 14498293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 15616596 - 15616523
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  15616596 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 15616523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 22320625 - 22320552
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  22320625 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 22320552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 22335680 - 22335607
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  22335680 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 22335607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 28948803 - 28948730
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  28948803 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 28948730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 30064808 - 30064735
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  30064808 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 30064735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 55021946 - 55021873
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  55021946 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 55021873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 265 - 342
Target Start/End: Complemental strand, 16795622 - 16795547
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  16795622 tgatgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 16795547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 11166676 - 11166749
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||    
T  11166676 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaggatga 11166749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 267 - 342
Target Start/End: Original strand, 12853325 - 12853398
Alignment:
Q  267 atgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||  || |||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  12853325 atgattatattgtgttgttt--aatttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 12853398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 14067672 - 14067747
Alignment:
Q  7 tatggtgttagtatgtgttgattatattt-tataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||| |||||    
T  14067672 tatggtgtcagtatgtgttgattatatttatataagatgatgaatacgttgttgttatatttttataagatgatga 14067747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 18933337 - 18933390
Alignment:
Q  289 aagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18933337 aagttattagtgatgatgattacatgatgttatctatgagttgttaagtgtact 18933390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 30064482 - 30064429
Alignment:
Q  289 aagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30064482 aagttattagtgatgatgattacatgatgttatctatgagttgttaagtgtact 30064429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 11301389 - 11301437
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11301389 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 11301437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 4590119 - 4590195
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||| ||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||    
T  4590119 gtgacgattatattgtgtagttt--aagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtact 4590195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 340
Target Start/End: Original strand, 14068021 - 14068095
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgta 340  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||| |||||| ||| ||||    
T  14068021 gtgatgattatattgtgtagttt--aagttattagtgatgatgattacatgatgttatctaggagttgctaaatgta 14068095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 14664783 - 14664735
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14664783 ttttataagatgatgaatacgtttttgttatattaatataagaagatga 14664735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 14667947 - 14667899
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14667947 ttttataagatgatgaatatgttgttgttatattaatataagaagatga 14667899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 342
Target Start/End: Complemental strand, 14670142 - 14670070
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||  |||||||||||||||||   ||||||||| ||||||||||||||||| ||||||    
T  14670142 tgatgattatattgtgttgttt--aagttattagtgatgat---tacatgatgttatctatgagttgttaaatgtact 14670070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 15463999 - 15463922
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgat-gatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||||| |||| ||| ||||||||||||| ||||||    
T  15463999 gtgatgattatattgtgttgttt--aagttattagtgattgatgattacaggatgttatatatgagttgttaaatgtact 15463922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 15963869 - 15963791
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  15963869 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 15963791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 15967793 - 15967715
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  15967793 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 15967715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 15971717 - 15971639
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  15971717 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 15971639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 17318468 - 17318544
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||| ||||  ||||||||||||||||||| ||||||| | |||||| |||||||||| ||||||    
T  17318468 gtgatgattatattgtgtagttt--aagttattagtgatgatgaatacatgaagttatctaggagttgttaaatgtact 17318544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 4112607 - 4112649
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4112607 gatgattatattgtgttgttttaaagttattagtgatgatgat 4112649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 4108382 - 4108443
Alignment:
Q  4 gactatggtgttagtatgtgttgattata-ttttataagatgatgaatacgttgttgttata 64  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||    
T  4108382 gactttggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttattata 4108443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 267 - 308
Target Start/End: Original strand, 4108759 - 4108800
Alignment:
Q  267 atgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4108759 atgattatattgtgttgttttaaagttattagtgatgatgat 4108800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 4112234 - 4112295
Alignment:
Q  4 gactatggtgttagtatgtgttgattata-ttttataagatgatgaatacgttgttgttata 64  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||    
T  4112234 gactttggtgttagtatgtgttgattatatttttataagatgatgaatatgttgttattata 4112295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 292 - 342
Target Start/End: Complemental strand, 12337348 - 12337300
Alignment:
Q  292 ttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  12337348 ttattagtgatgatgattacatgatgata--tatgagttgttaagtgtact 12337300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 4589893 - 4589936
Alignment:
Q  37 ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  4589893 ataagatgatgaatacgttgttgttata-taatataagaagatga 4589936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 15963604 - 15963564
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  15963604 tgattacattgtgttgttttaaagttattagtgatgatgat 15963564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 15967528 - 15967488
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  15967528 tgattacattgtgttgttttaaagttattagtgatgatgat 15967488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 15971452 - 15971412
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  15971452 tgattacattgtgttgttttaaagttattagtgatgatgat 15971412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 14067732 - 14067777
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||   |||||||||||||||||||    
T  14067732 ttttataagatgatgaatacgttgttg---tattaatataagaagatga 14067777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 18440583 - 18440629
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  18440583 ttataagatgatgaatatgttgttgttatattattataagatgatga 18440629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 19485657 - 19485703
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  19485657 ttataagatgatgaatatgttgttgttatattattataagatgatga 19485703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 49390328 - 49390374
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  49390328 ttataagatgatgaatatgttgttgttatattattataagatgatga 49390374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 342
Target Start/End: Original strand, 10834935 - 10834976
Alignment:
Q  301 atgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||| ||||||||||||||||| ||||||    
T  10834935 atgatgattacatgatgttatctatgagttgttaaatgtact 10834976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 342
Target Start/End: Complemental strand, 14681664 - 14681594
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||  ||||||||||   |||||||||||||||| ||||  ||||||||||| ||||||    
T  14681664 tgatgattatattgtgttgttt--aagttattag---tgatgattacatgatgttatc--tgagttgttaaatgtact 14681594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 8928858 - 8928902
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||    
T  8928858 gtgatgatgattgcatgatgttatctatgagttgttaaatgtact 8928902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 13435906 - 13435862
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||| ||| ||||||||||||| ||||||    
T  13435906 gtgatgatgattacatgatgttatatatgagttgttaaatgtact 13435862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 16751580 - 16751616
Alignment:
Q  37 ataagatgatgaatacgttgttgttatattaatataa 73  Q
    ||||||||||||||||||||||||||||||| |||||    
T  16751580 ataagatgatgaatacgttgttgttatattattataa 16751616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 19774584 - 19774548
Alignment:
Q  37 ataagatgatgaatacgttgttgttatattaatataa 73  Q
    ||||||||||||||||||||||||||||||| |||||    
T  19774584 ataagatgatgaatacgttgttgttatattattataa 19774548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 18440505 - 18440551
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||| ||||||| ||||||| ||||||| |||||    
T  18440505 ttataagatgatgaatatgttgttgctatattattataagatgatga 18440551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 19485579 - 19485625
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||| ||||||| ||||||| ||||||| |||||    
T  19485579 ttataagatgatgaatatgttgttgctatattattataagatgatga 19485625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 342
Target Start/End: Original strand, 16751895 - 16751936
Alignment:
Q  301 atgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||  ||||||||||||||||| ||||||    
T  16751895 atgatgattacatgatattatctatgagttgttaaatgtact 16751936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 3802058 - 3802014
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  3802058 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 3802014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 311
Target Start/End: Original strand, 8490350 - 8490395
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattac 311  Q
    |||||||||||||||||| ||||  ||||||||||||||| |||||||    
T  8490350 gtgatgattatattgtgtagttt--aagttattagtgatggtgattac 8490395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 14764786 - 14764830
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  14764786 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 14764830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 20249840 - 20249884
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  20249840 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 20249884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 81
Target Start/End: Original strand, 27410959 - 27410987
Alignment:
Q  53 gttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||    
T  27410959 gttgttgttatattaatataagaagatga 27410987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 29545929 - 29545973
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  29545929 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 29545973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 54519685 - 54519641
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  54519685 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 54519641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 1e-35; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 24630006 - 24630082
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24630006 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 24630082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 24645271 - 24645195
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24645271 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 24645195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 24648047 - 24647971
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24648047 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 24647971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 27600491 - 27600415
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27600491 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 27600415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 30346616 - 30346692
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30346616 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 30346692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 10103255 - 10103331
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10103255 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgttgatatctatgagttgttaagtgtact 10103331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 12902565 - 12902641
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12902565 gatgattatattgtgttgttttaaagttattagtgatgatgattacataatgatatctatgagttgttaagtgtact 12902641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 27380952 - 27381028
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27380952 gatgattatatggtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 27381028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 27384922 - 27384998
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27384922 gatgattatatggtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 27384998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 31344035 - 31343961
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  31344035 tgattacattgtgttgttttaaagttattagtgatgatgattacatgaagatatctatgagttgttaggtgtact 31343961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 10102956 - 10103029
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  10102956 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 10103029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 24629627 - 24629700
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  24629627 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 24629700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 27600790 - 27600717
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  27600790 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 27600717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 30346163 - 30346236
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  30346163 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 30346236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 27384546 - 27384619
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||    
T  27384546 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgtcgttatattaatacaagaagatga 27384619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 27380500 - 27380571
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagat 79  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||    
T  27380500 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgtcgttatattaatacaagaagat 27380571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 265 - 342
Target Start/End: Complemental strand, 9784113 - 9784038
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||| |||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||| | ||||||    
T  9784113 tgataattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgtttaatgtact 9784038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 31344274 - 31344221
Alignment:
Q  28 ttatattttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  31344274 ttatattttataagatgatgaatacgttattgttatattaatacaagaagatga 31344221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 41532149 - 41532227
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  41532149 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 41532227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 1282396 - 1282318
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  1282396 tatggtgttagtatgtgttgattacattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 1282318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 24648313 - 24648249
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatata 72  Q
    |||||||||||||||||||||||||||| |||| | |||||||| ||||||||||||||| ||||    
T  24648313 tggtgttagtatgtgttgattatattttcataaaaagatgaatatgttgttgttatattattata 24648249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 41532414 - 41532454
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  41532414 tgattacattgtgttgttttaaagttattagtgatgatgat 41532454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 342
Target Start/End: Original strand, 41532447 - 41532477
Alignment:
Q  312 atgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||    
T  41532447 atgatgatatctatgagttgttaagtgtact 41532477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 6481872 - 6481828
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  6481872 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 6481828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 6485339 - 6485295
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  6485339 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 6485295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 19663548 - 19663592
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  19663548 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 19663592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 20260345 - 20260301
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  20260345 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 20260301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 21074498 - 21074542
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||  |||||||| ||||||||||||||||| ||||||    
T  21074498 gtgatgatgacaacatgatgttatctatgagttgttaaatgtact 21074542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 342
Target Start/End: Complemental strand, 24647166 - 24647138
Alignment:
Q  314 gatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||    
T  24647166 gatgatatctatgagttgttaagtgtact 24647138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 1e-35; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 1009382 - 1009306
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1009382 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 1009306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 1926754 - 1926830
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1926754 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 1926830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 16376774 - 16376850
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16376774 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 16376850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 20925768 - 20925844
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20925768 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 20925844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 52634388 - 52634312
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52634388 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 52634312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 33796151 - 33796077
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33796151 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 33796077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 1009681 - 1009608
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  1009681 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 1009608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 1926301 - 1926374
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  1926301 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 1926374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 16376552 - 16376625
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  16376552 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 16376625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 20925315 - 20925388
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  20925315 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 20925388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 52634767 - 52634694
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  52634767 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 52634694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 265 - 342
Target Start/End: Original strand, 22132058 - 22132133
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  22132058 tgatgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 22132133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 33796344 - 33796291
Alignment:
Q  28 ttatattttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33796344 ttatattttataagatgatgaatacgttgttgttatattaatataagaagatga 33796291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 21406373 - 21406297
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||    
T  21406373 gtgatgattatattgtgtagttt--aagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtact 21406297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 265 - 342
Target Start/End: Original strand, 41801238 - 41801313
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||  || |||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  41801238 tgatgattatattgtgttgttt--aatttattagtgatgatgattacatgatattatctatgagttgttaaatgtact 41801313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 20230120 - 20230173
Alignment:
Q  289 aagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20230120 aagttattagtgatgatgattacatgatgttatctatgagttgttaagtgtact 20230173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 21406608 - 21406553
Alignment:
Q  27 attatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21406608 attatattttcataagatgatgaatacgttgttgttatattaatataagaagatga 21406553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 33796503 - 33796436
Alignment:
Q  7 tatggtgttagtatgtgttgattata-ttttataagatgatgaatacgttgttgttatattaatataa 73  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||| |||||    
T  33796503 tatggtgttagtatgtgttgattatatttttataagatgatgtatatgttgttgttatattattataa 33796436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 20229941 - 20229995
Alignment:
Q  28 ttatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20229941 ttatattttcataagatgatgaatacgttgttgttatattaatataagaagatga 20229995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 28195107 - 28195153
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  28195107 ttataagatgatgaatatgttgttgttatattattataagatgatga 28195153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 35982340 - 35982386
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  35982340 ttataagatgatgaatatgttgttgttatattattataagatgatga 35982386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 21740484 - 21740525
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| ||||||| |||||    
T  21740484 agatgatgaatacgttgttgttatattattataagatgatga 21740525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 12271088 - 12271028
Alignment:
Q  22 tgttgattatatt-ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||| ||||||| ||||||||||||||||| ||||||||||||||| ||| ||| |||||    
T  12271088 tgttgcttatattattataagatgatgaatatgttgttgttatattattatgagatgatga 12271028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 39244891 - 39244927
Alignment:
Q  37 ataagatgatgaatacgttgttgttatattaatataa 73  Q
    ||||||||||||||||||||||||||||||| |||||    
T  39244891 ataagatgatgaatacgttgttgttatattattataa 39244927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 39248446 - 39248482
Alignment:
Q  37 ataagatgatgaatacgttgttgttatattaatataa 73  Q
    ||||||||||||||||||||||||||||||| |||||    
T  39248446 ataagatgatgaatacgttgttgttatattattataa 39248482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 41389339 - 41389375
Alignment:
Q  37 ataagatgatgaatacgttgttgttatattaatataa 73  Q
    ||||||||||||||||||||||||||||||| |||||    
T  41389339 ataagatgatgaatacgttgttgttatattattataa 41389375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 41801091 - 41801139
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||| ||||||||||||||  ||||||| |||||    
T  41801091 ttttataagatgatgaatatgttgttgttatatttttataagatgatga 41801139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 342
Target Start/End: Original strand, 39245163 - 39245205
Alignment:
Q  300 gatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||  ||||||||||||||||| ||||||    
T  39245163 gatgatgattacatgatattatctatgagttgttaaatgtact 39245205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 342
Target Start/End: Original strand, 39248718 - 39248760
Alignment:
Q  300 gatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||  ||||||||||||||||| ||||||    
T  39248718 gatgatgattacatgatattatctatgagttgttaaatgtact 39248760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 342
Target Start/End: Original strand, 41389657 - 41389699
Alignment:
Q  300 gatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||  ||||||||||||||||| ||||||    
T  41389657 gatgatgattacatgatattatctatgagttgttaaatgtact 41389699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 20315650 - 20315609
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  20315650 agatgatgaatatgttgttgttatattattataagatgatga 20315609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 41306242 - 41306283
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  41306242 agatgatgaatatgttgttgttatattattataagatgatga 41306283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 16371013 - 16370969
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  16371013 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 16370969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 21740349 - 21740389
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataaga 75  Q
    |||| |||||||||||| ||||||||||||||| |||||||    
T  21740349 ttatgagatgatgaatatgttgttgttatattattataaga 21740389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 41801124 - 41801171
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||| ||||||| ||||||| ||||||| |||||    
T  41801124 ttttataagatgatgaata-gttgttgatatattattataagatgatga 41801171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 6279 - 6355
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6279 gatgattatattgtgttgttttaaagttattagcgatgatgattacatgatgatatctatgagttgttaagtgtact 6355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 6167 - 6239
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatg 80  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6167 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatataagaagatg 6239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 60283 - 60360
Alignment:
Q  266 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  60283 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 60360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 11170 - 11095
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11170 gatgattat-ttgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 11095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 11475 - 11402
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  11475 tggtgttagtatgtgttgattatattttcataagatgatgaatacgttgttgttatattaatacaagaagatga 11402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 781 - 855
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  781 tgattacattgtgttgttttaaagttattagtgatgatgattgcatgatgatatctatgagttgttaagtgtact 855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 14962 - 14888
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14962 tgattacattgtgttgttttaaagttattagtgatgatgattacatgaagatatctatgagttgttaagtgtact 14888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 275 - 341
Target Start/End: Original strand, 11027 - 11093
Alignment:
Q  275 attgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtac 341  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11027 attgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtac 11093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 10734 - 10787
Alignment:
Q  28 ttatattttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10734 ttatactttataagatgatgaatacgttgttgttatattaatataagaagatga 10787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 8695 - 8621
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8695 tgattacatagtgtttttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 8621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 8933 - 8885
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||| |||||||||||||| ||||||||||||||||| |||||||    
T  8933 ttttataaaatgatgaatacgtttttgttatattaatataaaaagatga 8885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 34089 - 34162
Alignment:
Q  266 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  34089 gatgattatattgtgttgttttaaagttattagtgat---gattacatgatgatatctatgagttgttaagtgtact 34162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 33862 - 33940
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  33862 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 33940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 11895 - 11821
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11895 tgattacattgtgttgttttaaaattattagtgatgatgattacatgatgaaatctatgagttgttaagtgtact 11821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 265 - 342
Target Start/End: Original strand, 21298 - 21374
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  21298 tgatgattatattgtgttgttt-aaagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 21374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 21162 - 21210
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||| ||||||||||||||  ||||||| |||||    
T  21162 ttttataagatgatgaatatgttgttgttatatttttataagatgatga 21210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 265 - 342
Target Start/End: Original strand, 6920 - 6995
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  6920 tgatgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtact 6995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 6842 - 6889
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||| ||||||| ||||||| ||||||| |||||    
T  6842 ttttataagatgatgaata-gttgttgatatattattataagatgatga 6889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 25526 - 25602
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||  ||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||    
T  25526 gtgatgattatattgtgttgttt--aagttattagtgatgatgaatacatgatgttatctatgagttgttaaatgtact 25602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 25446 - 25491
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatg 80  Q
    ||||| ||||||||||| ||||||||||||||| ||||||| ||||    
T  25446 ttatatgatgatgaatatgttgttgttatattactataagatgatg 25491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 52; Significance: 9e-21; HSPs: 5)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 79538 - 79475
Alignment:
Q  4 gactatggtgttagtatgtgttgattatattt-tataagatgatgaatacgttgttgttatatt 66  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  79538 gactatggtgttagtatgtgttgattatatttatgtaagatgatgaatacgttgttgttatatt 79475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 79481 - 79428
Alignment:
Q  28 ttatattttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  79481 ttatattttataagatgatgaatacattgttgttatattaatataagaagatga 79428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 62821 - 62874
Alignment:
Q  289 aagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||    
T  62821 aagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtact 62874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 62568 - 62621
Alignment:
Q  28 ttatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  62568 ttatattttcataagatgttgaatacgttgttgttata-taatataagaagatga 62621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 66484 - 66537
Alignment:
Q  28 ttatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  66484 ttatattttcataagatgttgaatacgttgttgttata-taatataagaagatga 66537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 5006 - 5079
Alignment:
Q  9 tggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||| || |||||||    
T  5006 tggtgttagtatgtgttgattatgttttcataagatgatgaatatgttgttgttatattaatacaaaaagatga 5079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 5489 - 5565
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||| ||    |||||||||||||||||||||| |||| ||||| |||||||| ||| |||||||    
T  5489 gtgatgattatattgtgtagtcc--aagttattagtgatgatgattatatgaagatatttatgagttcttaggtgtact 5565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 265 - 341
Target Start/End: Original strand, 8699 - 8773
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtac 341  Q
    ||||||||||||||||||||||  || |||||||||||||||||||||||||| |||||| |||||||||| |||||    
T  8699 tgatgattatattgtgttgttt--aatttattagtgatgatgattacatgatgttatctacgagttgttaaatgtac 8773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 8445 - 8500
Alignment:
Q  12 tgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttatatt 66  Q
    ||||| |||||| || ||||||||| ||||||||||||||| ||||||||||||||    
T  8445 tgttattatgtgatgtttatatttttataagatgatgaatatgttgttgttatatt 8500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 19176 - 19128
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19176 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 19128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 19280 - 19232
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19280 ttttataagatgatgaatacgttgttgttagattaatataagaagatga 19232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 342
Target Start/End: Complemental strand, 18942 - 18867
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||| |  ||||||||||||||||||||  ||||| ||||||| ||||||||| ||||||    
T  18942 tgatgattatattgtgttgtttca--gttattagtgatgatgattatgtgatgttatctataagttgttaaatgtact 18867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 11109 - 11061
Alignment:
Q  33 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11109 ttttataagatgatgaatacgttgttgttatattaatataagaagatga 11061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 10874 - 10834
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  10874 tgattacattgtgttgttttaaagttattagtgatgatgat 10834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 11148 - 11094
Alignment:
Q  28 ttatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||| |||||||||||||||| |||||||||||||  ||||||| |||||    
T  11148 ttatattttcataagatgatgaatacattgttgttatatttttataagatgatga 11094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 4094 - 4018
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||| ||||  |||||||||||||| |||||||||||||| |||||| |||||||||| ||||||    
T  4094 gtgatgattatattgtgtagttt--aagttattagtgattatgattacatgatgttatctaggagttgttaaatgtact 4018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 1009 - 955
Alignment:
Q  28 ttatatttt-ataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1009 ttatattttcataagatgatgaatacgttgttgttatattaatataagaagatga 955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 307
Target Start/End: Complemental strand, 42 - 1
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtgatgatga 307  Q
    |||||||||||||||||| ||||  |||||||||||||||||||    
T  42 gtgatgattatattgtgtagttt--aagttattagtgatgatga 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 265 - 342
Target Start/End: Original strand, 74291 - 74366
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||| |||||||||  || |||||||||| ||||||||||||||| ||||||||||||||||| ||||||    
T  74291 tgatgattatatggtgttgttt--aatttattagtgaagatgattacatgatgttatctatgagttgttaaatgtact 74366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 74077 - 74117
Alignment:
Q  28 ttatattt-tataagatgatgaatacgttgttgttatatta 67  Q
    |||||||| |||||||||||||||| |||||||||||||||    
T  74077 ttatatttctataagatgatgaatatgttgttgttatatta 74117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 15281 - 15359
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata---cgttgttgttatattaatataagaagatga 81  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||| |||| ||||||||    
T  15281 tatggtgttagtatgtgttgattatattttgataagatgatgaatatgttgttgttgttatattattatatgaagatga 15359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 15546 - 15586
Alignment:
Q  268 tgattatattgtgttgttttaaagttattagtgatgatgat 308  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  15546 tgattacattgtgttgttttaaagttattagtgatgatgat 15586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 342
Target Start/End: Original strand, 15579 - 15609
Alignment:
Q  312 atgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||||    
T  15579 atgatgatatctatgagttgttaagtgtact 15609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 37179 - 37232
Alignment:
Q  289 aagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||    
T  37179 aagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtact 37232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 292 - 342
Target Start/End: Complemental strand, 5917 - 5869
Alignment:
Q  292 ttattagtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  5917 ttattagtgatgatgattacatgatgata--tatgagttgttaagtgtact 5869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 342
Target Start/End: Original strand, 37161 - 37237
Alignment:
Q  265 tgatgattatattgtgttgttttaaagttatta-gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    ||||||||||||||||| || |  ||||||||| | |||||||||||||||||| ||||||||||||||||| ||||||    
T  37161 tgatgattatattgtgtggtct--aagttattatgagatgatgattacatgatgttatctatgagttgttaaatgtact 37237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 28560 - 28516
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||    
T  28560 gtgatgatgattacatgatgttatctatgagttgttaaatgtact 28516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 34025 - 33981
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||    
T  34025 gtgatgatgattacatgatgttatctatgagttgttaaatgtact 33981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 134 - 76
Alignment:
Q  7 tatggtgttagtatgtgttgattatatttt-ataagatgatgaatacgttgttgttata 64  Q
    |||| ||||| ||||||||| ||||||||| ||||||||||||||| ||||||||||||    
T  134 tatgatgttattatgtgttgtttatatttttataagatgatgaatatgttgttgttata 76  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1873 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1873
Description:

Target: scaffold1873; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 327
Target Start/End: Complemental strand, 753 - 691
Alignment:
Q  264 gtgatgattatattgtgttgttttaaagttattagtga-tgatgattacatgatgatatctatga 327  Q
    |||||||||||||||||||||||  ||||||||||||| || ||||||||||||| |||| ||||    
T  753 gtgatgattatattgtgttgttt--aagttattagtgattggtgattacatgatgttatccatga 691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 8555 - 8593
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataa 73  Q
    ||||||||||||||||| ||||||||||||||| |||||    
T  8555 ttataagatgatgaatatgttgttgttatattattataa 8593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 8621 - 8667
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    ||||||||||||||||| ||||||||||||||| || |||| |||||    
T  8621 ttataagatgatgaatatgttgttgttatattattagaagatgatga 8667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 7004 - 6963
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  7004 agatgatgaatatgttgttgttatattattataagatgatga 6963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 44439 - 44480
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  44439 agatgatgaatatgttgttgttatattattataagatgatga 44480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 44504 - 44545
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  44504 agatgatgaatatgttgttgttatattattataagatgatga 44545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 9113 - 9072
Alignment:
Q  40 agatgatgaatacgttgttgttatattaatataagaagatga 81  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  9113 agatgatgaatatgttgttgttatattattataagatgatga 9072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 153803 - 153840
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaa 335  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  153803 gtgatgatgattacatgatgtcatctatgagttgttaa 153840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 288 - 244
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  288 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0842 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 5330 - 5286
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  5330 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 5286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 10812 - 10856
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  10812 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 10856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 109689 - 109645
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  109689 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 109645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 224133 - 224177
Alignment:
Q  298 gtgatgatgattacatgatgatatctatgagttgttaagtgtact 342  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||    
T  224133 gtgatgatgattatgtgatgttatctatgagttgttaaatgtact 224177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 362266 - 362226
Alignment:
Q  35 ttataagatgatgaatacgttgttgttatattaatataaga 75  Q
    |||| |||||||||||| ||||||||||||||| |||||||    
T  362266 ttatgagatgatgaatatgttgttgttatattattataaga 362226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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