View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21683_high_18 (Length: 354)

Name: NF21683_high_18
Description: NF21683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21683_high_18
NF21683_high_18
[»] chr5 (27 HSPs)
chr5 (1-149)||(41878332-41878480)
chr5 (2-149)||(23113084-23113231)
chr5 (2-149)||(38146100-38146247)
chr5 (2-146)||(22335793-22335937)
chr5 (2-146)||(22339331-22339475)
chr5 (2-84)||(28371774-28371856)
chr5 (2-89)||(22749494-22749581)
chr5 (2-84)||(37599642-37599724)
chr5 (2-84)||(42959828-42959910)
chr5 (76-149)||(9775101-9775174)
chr5 (9-89)||(9775210-9775290)
chr5 (2-84)||(19510776-19510858)
chr5 (77-147)||(19510664-19510734)
chr5 (86-147)||(22469508-22469569)
chr5 (77-144)||(10816060-10816127)
chr5 (77-144)||(23538059-23538126)
chr5 (77-147)||(22358456-22358526)
chr5 (77-147)||(22749363-22749433)
chr5 (77-147)||(24277902-24277972)
chr5 (77-147)||(24384241-24384311)
chr5 (86-147)||(42959717-42959778)
chr5 (89-147)||(37599777-37599835)
chr5 (88-146)||(29325941-29325999)
chr5 (31-86)||(10034977-10035032)
chr5 (88-147)||(43120581-43120640)
chr5 (88-147)||(43124114-43124173)
chr5 (30-78)||(21888417-21888465)
[»] chr3 (29 HSPs)
chr3 (1-149)||(14764476-14764624)
chr3 (1-149)||(3802220-3802368)
chr3 (3-149)||(23372226-23372372)
chr3 (3-149)||(51299783-51299929)
chr3 (1-149)||(12304424-12304580)
chr3 (54-149)||(54519847-54519942)
chr3 (56-149)||(9532508-9532601)
chr3 (2-84)||(20249485-20249567)
chr3 (2-84)||(29545501-29545583)
chr3 (89-147)||(18899719-18899777)
chr3 (2-84)||(38312498-38312580)
chr3 (86-147)||(20249665-20249726)
chr3 (91-147)||(10834711-10834767)
chr3 (77-144)||(17548768-17548835)
chr3 (77-147)||(1989791-1989861)
chr3 (77-147)||(38312643-38312713)
chr3 (86-147)||(29545683-29545744)
chr3 (77-144)||(13026887-13026954)
chr3 (77-144)||(34853095-34853162)
chr3 (30-84)||(18888834-18888888)
chr3 (1-69)||(9532612-9532680)
chr3 (30-94)||(18899863-18899927)
chr3 (86-147)||(180069-180130)
chr3 (92-147)||(23396572-23396627)
chr3 (86-144)||(18958287-18958345)
chr3 (88-146)||(54972689-54972747)
chr3 (88-146)||(54975299-54975357)
chr3 (88-146)||(54977909-54977967)
chr3 (88-147)||(55292996-55293055)
[»] chr2 (25 HSPs)
chr2 (2-146)||(19663173-19663317)
chr2 (9-149)||(20260507-20260647)
chr2 (2-146)||(6261895-6262039)
chr2 (1-149)||(10685970-10686118)
chr2 (2-84)||(9241079-9241161)
chr2 (2-84)||(6482098-6482180)
chr2 (2-84)||(6485565-6485647)
chr2 (77-144)||(26895971-26896038)
chr2 (77-147)||(6481986-6482056)
chr2 (77-147)||(6485453-6485523)
chr2 (77-144)||(6478596-6478663)
chr2 (77-147)||(9240919-9240989)
chr2 (30-89)||(21074235-21074294)
chr2 (77-144)||(22702738-22702805)
chr2 (77-147)||(23374666-23374736)
chr2 (77-142)||(10040507-10040572)
chr2 (86-132)||(19803523-19803569)
chr2 (27-69)||(29753004-29753046)
chr2 (86-131)||(24275940-24275985)
chr2 (86-144)||(22109202-22109260)
chr2 (88-147)||(31502927-31502986)
chr2 (88-147)||(31505493-31505552)
chr2 (30-78)||(20914594-20914642)
chr2 (33-69)||(23148437-23148473)
chr2 (33-69)||(23560227-23560263)
[»] chr7 (43 HSPs)
chr7 (2-149)||(18871547-18871694)
chr7 (9-149)||(29795413-29795553)
chr7 (9-149)||(29799232-29799372)
chr7 (2-147)||(146752-146897)
chr7 (2-84)||(15166520-15166602)
chr7 (2-84)||(16007830-16007912)
chr7 (2-82)||(10897530-10897610)
chr7 (77-149)||(18606588-18606660)
chr7 (76-149)||(23666297-23666370)
chr7 (9-89)||(23666181-23666261)
chr7 (22-89)||(11302596-11302663)
chr7 (77-147)||(11660569-11660639)
chr7 (77-147)||(13255217-13255287)
chr7 (2-84)||(14565456-14565538)
chr7 (77-149)||(14565338-14565410)
chr7 (77-147)||(14420989-14421059)
chr7 (22-84)||(14421101-14421163)
chr7 (77-144)||(16109729-16109796)
chr7 (77-144)||(29003578-29003645)
chr7 (77-144)||(34956892-34956959)
chr7 (77-144)||(48742929-48742996)
chr7 (77-147)||(11302465-11302535)
chr7 (86-147)||(10897662-10897723)
chr7 (77-146)||(16572857-16572926)
chr7 (77-146)||(16592736-16592805)
chr7 (77-144)||(833753-833820)
chr7 (77-144)||(1198933-1199000)
chr7 (30-89)||(18606729-18606788)
chr7 (77-147)||(15166408-15166478)
chr7 (77-145)||(13850332-13850400)
chr7 (86-137)||(16007681-16007732)
chr7 (86-144)||(837791-837849)
chr7 (86-144)||(1202971-1203029)
chr7 (88-147)||(35365639-35365698)
chr7 (88-146)||(4992853-4992911)
chr7 (88-146)||(16005682-16005740)
chr7 (86-147)||(14189719-14189780)
chr7 (86-147)||(14192474-14192535)
chr7 (30-77)||(13678156-13678204)
chr7 (88-147)||(8775664-8775723)
chr7 (88-147)||(21744005-21744064)
chr7 (33-78)||(16668811-16668856)
chr7 (29-78)||(45185326-45185375)
[»] chr4 (26 HSPs)
chr4 (9-149)||(15533469-15533609)
chr4 (1-149)||(36037202-36037350)
chr4 (54-149)||(49548816-49548911)
chr4 (77-147)||(18211877-18211947)
chr4 (77-147)||(24048106-24048176)
chr4 (86-147)||(15989484-15989545)
chr4 (77-144)||(4831994-4832061)
chr4 (77-144)||(4835289-4835356)
chr4 (77-144)||(14047474-14047541)
chr4 (77-144)||(30146038-30146105)
chr4 (30-77)||(18212014-18212061)
chr4 (91-147)||(33685124-33685180)
chr4 (92-147)||(20900137-20900192)
chr4 (92-147)||(27027292-27027347)
chr4 (86-147)||(3336815-3336876)
chr4 (86-144)||(4828705-4828766)
chr4 (113-147)||(17142574-17142608)
chr4 (86-143)||(13877452-13877509)
chr4 (86-147)||(13881147-13881208)
chr4 (88-147)||(4170366-4170425)
chr4 (88-147)||(14698091-14698150)
chr4 (89-144)||(28916798-28916853)
chr4 (88-147)||(31131995-31132054)
chr4 (88-147)||(41791042-41791101)
chr4 (88-147)||(43258613-43258672)
chr4 (84-144)||(28382271-28382331)
[»] chr6 (19 HSPs)
chr6 (2-149)||(4476046-4476193)
chr6 (1-149)||(12941471-12941631)
chr6 (9-89)||(28290560-28290640)
chr6 (88-147)||(24266445-24266504)
chr6 (77-147)||(221392-221462)
chr6 (89-147)||(23351758-23351816)
chr6 (77-144)||(29848909-29848976)
chr6 (77-147)||(13763617-13763687)
chr6 (77-147)||(28290701-28290771)
chr6 (77-144)||(16133862-16133929)
chr6 (77-144)||(29417306-29417373)
chr6 (77-144)||(19444538-19444605)
chr6 (86-144)||(23621625-23621683)
chr6 (28-77)||(25395873-25395922)
chr6 (88-147)||(2288561-2288620)
chr6 (86-144)||(8717439-8717496)
chr6 (34-71)||(22346441-22346478)
chr6 (79-147)||(15538629-15538697)
chr6 (34-78)||(25749581-25749625)
[»] scaffold0544 (1 HSPs)
scaffold0544 (3-149)||(3199-3345)
[»] scaffold1427 (1 HSPs)
scaffold1427 (54-149)||(429-524)
[»] scaffold0026 (2 HSPs)
scaffold0026 (2-89)||(109934-110021)
scaffold0026 (77-147)||(109803-109873)
[»] scaffold0124 (2 HSPs)
scaffold0124 (2-84)||(37166-37248)
scaffold0124 (77-147)||(37383-37453)
[»] chr8 (22 HSPs)
chr8 (2-89)||(27942522-27942609)
chr8 (2-84)||(8729361-8729443)
chr8 (2-84)||(44476013-44476095)
chr8 (2-84)||(44479275-44479357)
chr8 (77-147)||(20453899-20453969)
chr8 (77-147)||(21862045-21862115)
chr8 (89-147)||(44475901-44475959)
chr8 (89-147)||(44479163-44479221)
chr8 (86-147)||(8729469-8729530)
chr8 (89-147)||(20459521-20459579)
chr8 (77-147)||(43111685-43111755)
chr8 (86-147)||(44431311-44431372)
chr8 (89-147)||(32949394-32949452)
chr8 (86-147)||(19881557-19881618)
chr8 (77-137)||(38186330-38186390)
chr8 (88-147)||(28853317-28853376)
chr8 (90-147)||(365349-365406)
chr8 (88-147)||(6608941-6609000)
chr8 (88-147)||(7301840-7301899)
chr8 (86-145)||(15005088-15005147)
chr8 (88-147)||(45135627-45135686)
chr8 (86-144)||(24708418-24708476)
[»] chr1 (21 HSPs)
chr1 (2-84)||(16371283-16371365)
chr1 (2-84)||(20438880-20438962)
chr1 (77-147)||(19209253-19209323)
chr1 (77-147)||(28311850-28311920)
chr1 (77-144)||(13529104-13529171)
chr1 (88-147)||(16371127-16371186)
chr1 (86-147)||(20439012-20439073)
chr1 (77-144)||(29534179-29534246)
chr1 (77-144)||(32649529-32649596)
chr1 (77-147)||(16400393-16400463)
chr1 (86-147)||(28204955-28205016)
chr1 (92-147)||(18251856-18251911)
chr1 (92-147)||(18269859-18269914)
chr1 (92-147)||(18274537-18274592)
chr1 (88-147)||(20578831-20578890)
chr1 (88-147)||(20586524-20586583)
chr1 (92-147)||(20900680-20900735)
chr1 (86-144)||(21181812-21181870)
chr1 (98-147)||(16397625-16397674)
chr1 (88-147)||(293531-293590)
chr1 (88-146)||(45306662-45306720)
[»] scaffold0337 (2 HSPs)
scaffold0337 (77-147)||(10581-10651)
scaffold0337 (30-78)||(10512-10560)
[»] scaffold0216 (1 HSPs)
scaffold0216 (77-147)||(20968-21038)
[»] scaffold0607 (1 HSPs)
scaffold0607 (77-147)||(2406-2476)
[»] scaffold0338 (1 HSPs)
scaffold0338 (86-147)||(4428-4489)
[»] scaffold0012 (1 HSPs)
scaffold0012 (87-147)||(223874-223934)
[»] scaffold0117 (1 HSPs)
scaffold0117 (86-144)||(41535-41593)
[»] scaffold0021 (1 HSPs)
scaffold0021 (86-144)||(145780-145838)
[»] scaffold0188 (1 HSPs)
scaffold0188 (89-144)||(887-942)
[»] scaffold0089 (2 HSPs)
scaffold0089 (93-147)||(1558-1612)
scaffold0089 (30-89)||(1758-1817)
[»] scaffold0447 (1 HSPs)
scaffold0447 (77-142)||(13666-13731)
[»] scaffold0383 (1 HSPs)
scaffold0383 (77-142)||(11661-11726)
[»] scaffold0042 (1 HSPs)
scaffold0042 (86-147)||(50454-50515)
[»] scaffold0825 (1 HSPs)
scaffold0825 (77-147)||(2138-2208)
[»] scaffold0003 (1 HSPs)
scaffold0003 (77-147)||(137279-137349)
[»] scaffold0034 (1 HSPs)
scaffold0034 (86-147)||(35262-35323)
[»] scaffold0970 (1 HSPs)
scaffold0970 (96-144)||(3752-3800)
[»] scaffold0635 (1 HSPs)
scaffold0635 (77-142)||(6498-6563)
[»] scaffold0139 (1 HSPs)
scaffold0139 (30-77)||(16301-16348)
[»] scaffold0004 (1 HSPs)
scaffold0004 (86-132)||(59012-59058)
[»] scaffold0413 (1 HSPs)
scaffold0413 (77-124)||(10316-10363)
[»] scaffold0151 (1 HSPs)
scaffold0151 (86-144)||(1753-1811)
[»] scaffold0500 (1 HSPs)
scaffold0500 (86-147)||(12075-12136)
[»] scaffold0381 (1 HSPs)
scaffold0381 (86-147)||(14334-14395)
[»] scaffold0278 (1 HSPs)
scaffold0278 (86-147)||(22511-22572)
[»] scaffold0169 (1 HSPs)
scaffold0169 (28-77)||(5800-5849)
[»] scaffold0094 (1 HSPs)
scaffold0094 (28-77)||(51004-51053)
[»] scaffold0066 (1 HSPs)
scaffold0066 (91-144)||(47934-47987)
[»] scaffold0058 (1 HSPs)
scaffold0058 (86-147)||(40663-40724)
[»] scaffold0317 (1 HSPs)
scaffold0317 (30-77)||(49-97)
[»] scaffold0525 (1 HSPs)
scaffold0525 (92-147)||(11546-11601)
[»] scaffold0141 (1 HSPs)
scaffold0141 (88-147)||(32531-32590)
[»] scaffold0107 (1 HSPs)
scaffold0107 (88-147)||(2524-2583)
[»] scaffold0049 (1 HSPs)
scaffold0049 (88-147)||(82222-82281)
[»] scaffold0044 (1 HSPs)
scaffold0044 (88-147)||(6376-6435)
[»] scaffold0556 (1 HSPs)
scaffold0556 (89-147)||(9162-9220)
[»] scaffold0102 (1 HSPs)
scaffold0102 (29-71)||(44458-44500)
[»] scaffold1290 (1 HSPs)
scaffold1290 (29-78)||(1527-1576)
[»] scaffold0020 (1 HSPs)
scaffold0020 (33-78)||(177752-177797)
[»] scaffold0326 (1 HSPs)
scaffold0326 (30-78)||(5673-5721)
[»] scaffold0244 (2 HSPs)
scaffold0244 (30-78)||(9394-9442)
scaffold0244 (30-78)||(13467-13515)


Alignment Details
Target: chr5 (Bit Score: 141; Significance: 7e-74; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 41878332 - 41878480
Alignment:
Q  1 atagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggtt 100  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41878332 atagatttaattgatgagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggtt 41878431  T
Q  101 gaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41878432 gaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 41878480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 2 - 149
Target Start/End: Original strand, 23113084 - 23113231
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggttg 101  Q
    |||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23113084 tagatttaattgatgagttatatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggttg 23113183  T
Q  102 aattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23113184 aattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 23113231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 2 - 149
Target Start/End: Original strand, 38146100 - 38146247
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggttg 101  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  38146100 tagatttaattgatgagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataatttaagttatcgtcgttgttggttg 38146199  T
Q  102 aattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38146200 aattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 38146247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 22335937 - 22335793
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggttg 101  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22335937 tagatttaattgatgagttagatatctattattgatgatattgttcattatgaaatatatacatatattggataattgtagttatcgtcgttgttggttg 22335838  T
Q  102 aattagtaagtgttactaaagttaaagaagtaagaacattattgt 146  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||    
T  22335837 aattagtaactgttactaaagttaaaggagtaagaacattattgt 22335793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 22339475 - 22339331
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggttg 101  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22339475 tagatttaattgatgagttagatatctattattgatgatattgttcattatgaaatatatacatatattggataattgtagttatcgtcgttgttggttg 22339376  T
Q  102 aattagtaagtgttactaaagttaaagaagtaagaacattattgt 146  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||    
T  22339375 aattagtaactgttactaaagttaaaggagtaagaacattattgt 22339331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 28371774 - 28371856
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 84  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28371774 tagatttaattgatgagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 28371856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 22749581 - 22749494
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgt 89  Q
    |||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22749581 tagatttaattgatgaattagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttgtcgt 22749494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 37599642 - 37599724
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 84  Q
    |||||| |||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37599642 tagatttaattgatgaattagatatctattattgatgatattgttgactatgaaatatatacatatattggataattgtagtt 37599724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 42959910 - 42959828
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 84  Q
    |||||| |||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42959910 tagatttaattgatgaattagatatctattattggtgatattgttgattatgaaatatatacatatattggataattgtagtt 42959828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 9775174 - 9775101
Alignment:
Q  76 attgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 149  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  9775174 attgttgttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaataacattattgttaa 9775101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 9775290 - 9775210
Alignment:
Q  9 aattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgt 89  Q
    ||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  9775290 aattggtgagttagatatctattattgatgatattattgattatgaaatatatacatatattggataattgtagttgtcgt 9775210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 19510858 - 19510776
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 84  Q
    |||||| |||||||||  | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19510858 tagatttaattgatgaattggatatctattattgatgatattgttgatcatgaaatatatacatatattggataattgtagtt 19510776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 19510734 - 19510664
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19510734 ttgttgttgtcgtcgttgttggttgaattagcaagtgttactaaagttaaagaagtaagaacattattgtt 19510664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 22469569 - 22469508
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22469569 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaatattattgtt 22469508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 77 - 144
Target Start/End: Complemental strand, 10816127 - 10816060
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10816127 ttgtcgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaatattatt 10816060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 77 - 144
Target Start/End: Complemental strand, 23538126 - 23538059
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23538126 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaatattatt 23538059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 22358456 - 22358526
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22358456 ttgttgttgtcgtcgttgttaattgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 22358526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 22749433 - 22749363
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  22749433 ttgttgttgtcgtcgttgttggttgaattagaaagtgttactaaagttaaagaagtaagaatattattgtt 22749363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 24277902 - 24277972
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  24277902 ttgttgttgtcgtcgttgttggttgaattagtaagtgttattaaagttgaagaagtaagaacattattgtt 24277972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 24384311 - 24384241
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  24384311 ttgttgttgtcgtcgttgttggttgaattagtaagtgttattaaagttgaagaagtaagaacattattgtt 24384241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 42959778 - 42959717
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  42959778 tcgtcgttgctggttgaattagaaagtgttactaaagttaaagaagtaagaacattattgtt 42959717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 89 - 147
Target Start/End: Original strand, 37599777 - 37599835
Alignment:
Q  89 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  37599777 tcgttgatggttgaattagcaagtgttactaaagttaaagaagtaagaacattattgtt 37599835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 29325941 - 29325999
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgt 146  Q
    ||||||||||||||| |||||||| |||| ||||||| |||||||| ||| ||||||||    
T  29325941 gtcgttgttggttgatttagtaagagttattaaagttgaagaagtatgaatattattgt 29325999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 10035032 - 10034977
Alignment:
Q  31 tattgatgatattgttgattatgaaatatatacatatattggataattgtagttat 86  Q
    |||||||||| ||||| |||||||||||||||  ||||||| |||||||| |||||    
T  10035032 tattgatgatgttgttaattatgaaatatatatgtatattgaataattgttgttat 10034977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 43120640 - 43120581
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||| |||||||| |||| ||||||  |||||||| ||| |||||||||    
T  43120640 gtcgttgttggttgatttagtaagagttattaaagtcgaagaagtatgaatattattgtt 43120581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 43124173 - 43124114
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||| |||||||| |||| ||||||  |||||||| ||| |||||||||    
T  43124173 gtcgttgttggttgatttagtaagagttattaaagtcgaagaagtatgaatattattgtt 43124114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 21888465 - 21888417
Alignment:
Q  30 ttattgatgatattgttgattatgaaatatatacatatattggataatt 78  Q
    ||||||||||| ||||| |||||||||||||||  ||||||| ||||||    
T  21888465 ttattgatgatgttgttaattatgaaatatatatgtatattgaataatt 21888417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 141; Significance: 7e-74; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 14764476 - 14764624
Alignment:
Q  1 atagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggtt 100  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14764476 atagatttaattgatgagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggtt 14764575  T
Q  101 gaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14764576 gaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 14764624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 3802368 - 3802220
Alignment:
Q  1 atagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggtt 100  Q
    ||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  3802368 atagatttaattgatgagttagaaatctattattgatgatattgttgattatgaaatatatacatatattaggtaattgtagttatcgtcgttgttggtt 3802269  T
Q  101 gaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3802268 gaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 3802220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 23372226 - 23372372
Alignment:
Q  3 agattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggttga 102  Q
    ||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23372226 agattaaattgaagagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggttga 23372325  T
Q  103 attagtaagtgttactaaagttaaagaagtaagaacattattgttaa 149  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||    
T  23372326 attagtaagtgttactaaagattaagaagtaagaacattattgttaa 23372372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 51299929 - 51299783
Alignment:
Q  3 agattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggttga 102  Q
    ||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51299929 agattaaattgaagagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggttga 51299830  T
Q  103 attagtaagtgttactaaagttaaagaagtaagaacattattgttaa 149  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||    
T  51299829 attagtaagtgttactaaagattaagaagtaagaacattattgttaa 51299783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 12304580 - 12304424
Alignment:
Q  1 atagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatat--------tggataattgtagttatcgtcgt 92  Q
    ||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||        |||||||||||||||||||||||    
T  12304580 atagatttaattgatgagttagatatttattattgatgatattgttgattatgaaatatatatatatatatatatattggataattgtagttatcgtcgt 12304481  T
Q  93 tgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12304480 tgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 12304424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 54 - 149
Target Start/End: Complemental strand, 54519942 - 54519847
Alignment:
Q  54 aaatatatacatatattggataattgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  54519942 aaatatatacatatattggataattgtagttatcgtcgttgttggttgaattagtaagtgttactaaaggtaaagaagtaagaacattattgttaa 54519847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 56 - 149
Target Start/End: Complemental strand, 9532601 - 9532508
Alignment:
Q  56 atatatacatatattggataattgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 149  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9532601 atatatatatatattggataattgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 9532508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 20249485 - 20249567
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 84  Q
    |||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20249485 tagatttaattgatgaattagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 20249567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 29545501 - 29545583
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 84  Q
    |||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29545501 tagatttaattgatgaattagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 29545583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 18899777 - 18899719
Alignment:
Q  89 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18899777 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 18899719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 38312498 - 38312580
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 84  Q
    |||||| |||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  38312498 tagatttaattgatgaattagatatctattaatgatgatattgttgattatgaaatatatacatatattaaataattgtagtt 38312580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 20249665 - 20249726
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20249665 tcgtcgttgttggttgaattagcaagtgttactaaagttaaagaagtaagaacattattgtt 20249726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 10834711 - 10834767
Alignment:
Q  91 gttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10834711 gttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 10834767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 77 - 144
Target Start/End: Original strand, 17548768 - 17548835
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17548768 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaggaacattatt 17548835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 1989791 - 1989861
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  1989791 ttgttgttgtcgtcgttgttggttgaattagtaagtgttaataaagttaaagaagtaagaatattattgtt 1989861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 38312643 - 38312713
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  38312643 ttgttgttgtcgtcgttgttggttgaattaacaagtgttactaaagttaaagaagtaagaacattattgtt 38312713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 29545683 - 29545744
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  29545683 tcgtcgttgctggttgaattagcaagtgttactaaagttaaagaagtaagaacattattgtt 29545744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 77 - 144
Target Start/End: Original strand, 13026887 - 13026954
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13026887 ttgtcgttgtcgtctttgttggttgaattagtaagtgttactaaagttaaagaagtaagaatattatt 13026954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 77 - 144
Target Start/End: Original strand, 34853095 - 34853162
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  34853095 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaaattaaagaagtaagaatattatt 34853162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 18888888 - 18888834
Alignment:
Q  30 ttattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 84  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18888888 ttattgatgatgttgttgattatgaaatatatacatatattggataattgtagtt 18888834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 9532680 - 9532612
Alignment:
Q  1 atagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatat 69  Q
    ||||||| |||||||||| ||||||| |||||||||||||||||||||||| || ||||||||||||||    
T  9532680 atagatttaattgatgagttagatatttattattgatgatattgttgattaagagatatatacatatat 9532612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 18899927 - 18899863
Alignment:
Q  30 ttattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttg 94  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  18899927 ttattgatcatgttgttgattatgaaatatatacatatattggataattgtagttgtcgttgttg 18899863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 180069 - 180130
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||||||||||||||||||| ||||| | |||||||  |||||||||||||    
T  180069 tcgtcgttgttggttgaattagtaagtgttattaaagctgaagaagtgtgaacattattgtt 180130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 23396572 - 23396627
Alignment:
Q  92 ttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||| ||||||||| ||||||| |||||||| |||||||||||||    
T  23396572 ttgttggttgaattaataagtgttattaaagttgaagaagtatgaacattattgtt 23396627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 18958345 - 18958287
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||| |||||||||||||||||||||||||| |||| || |||||||| ||| ||||||    
T  18958345 tcgttgttgttggttgaattagtaagtgttattaaaattgaagaagtatgaatattatt 18958287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 54972747 - 54972689
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgt 146  Q
    ||||||||||||||| |||||||| |||| ||||||| |||||||| ||| ||||||||    
T  54972747 gtcgttgttggttgatttagtaagagttattaaagttgaagaagtatgaatattattgt 54972689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 54975357 - 54975299
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgt 146  Q
    ||||||||||||||| |||||||| |||| ||||||| |||||||| ||| ||||||||    
T  54975357 gtcgttgttggttgatttagtaagagttattaaagttgaagaagtatgaatattattgt 54975299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 54977967 - 54977909
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgt 146  Q
    ||||||||||||||| |||||||| |||| ||||||| |||||||| ||| ||||||||    
T  54977967 gtcgttgttggttgatttagtaagagttattaaagttgaagaagtatgaatattattgt 54977909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 55292996 - 55293055
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||| ||||||||| |||||||||||| |||||| | |||||||| ||| |||||||||    
T  55292996 gtcgtcgttggttgatttagtaagtgtttctaaagatgaagaagtatgaatattattgtt 55293055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 137; Significance: 2e-71; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 19663173 - 19663317
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggttg 101  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19663173 tagatttaattgatgagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggttg 19663272  T
Q  102 aattagtaagtgttactaaagttaaagaagtaagaacattattgt 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  19663273 aattagtaagtgttactaaagttaaagaagtaagaacattattgt 19663317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 20260647 - 20260507
Alignment:
Q  9 aattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggttgaattagt 108  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  20260647 aattgatgagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgtcgttggttgaattagt 20260548  T
Q  109 aagtgttactaaagttaaagaagtaagaacattattgttaa 149  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20260547 aagtgttactaaagttaaagaagtaagaacattattgttaa 20260507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 6261895 - 6262039
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggttg 101  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6261895 tagatttaattgatgagttagatatctattattgatgatattgttgattatgaaatatatacatatattgaataattgtagttatcgtcgttgttggttg 6261994  T
Q  102 aattagtaagtgttactaaagttaaagaagtaagaacattattgt 146  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  6261995 aattagtaactgttactaaagttaaagaagtaagaacattattgt 6262039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 10685970 - 10686118
Alignment:
Q  1 atagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggtt 100  Q
    ||||||| |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10685970 atagatttaattgatgagttagatatttattattgacgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgtcgttggtt 10686069  T
Q  101 gaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10686070 gaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 10686118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 9241161 - 9241079
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 84  Q
    |||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9241161 tagatttaattgatgaattagatatctattattgatgatattgttgattatgaaatatatacatatattggatatttgtagtt 9241079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 6482180 - 6482098
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 84  Q
    |||||| |||||||||  | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6482180 tagatttaattgatgaattggatatctattattgatgatattgttgatcatgaaatatatacatatattggataattgtagtt 6482098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 6485647 - 6485565
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 84  Q
    |||||| |||||||||  | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6485647 tagatttaattgatgaattggatatctattattgatgatattgttgatcatgaaatatatacatatattggataattgtagtt 6485565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 77 - 144
Target Start/End: Complemental strand, 26896038 - 26895971
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26896038 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 26895971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 6482056 - 6481986
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6482056 ttgttgttgtcgtcgttgttggttgaattagcaagtgttactaaagttaaagaagtaagaacattattgtt 6481986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 6485523 - 6485453
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6485523 ttgttgttgtcgtcgttgttggttgaattagcaagtgttactaaagttaaagaagtaagaacattattgtt 6485453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 77 - 144
Target Start/End: Original strand, 6478596 - 6478663
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6478596 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaggaacattatt 6478663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 9240989 - 9240919
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  9240989 ttgttgttgtcgtcgttgttggttgaactagcaagtgttactaaagttaaagaagtaagaacattattgtt 9240919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 21074235 - 21074294
Alignment:
Q  30 ttattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgt 89  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21074235 ttattgatgatgttgttgattatgaaatatatacatatattggataattgtagttgtcgt 21074294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 77 - 144
Target Start/End: Complemental strand, 22702805 - 22702738
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  22702805 ttgttgttgtcgtcgttgttgattgaattagtaagtgttactaaagttaaagaagtaagaatattatt 22702738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 23374736 - 23374666
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||| |||||    
T  23374736 ttgttgttgtcgtcgttgttggttgaattagtaagtgttattaaagttgaagaagtatgaacatttttgtt 23374666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 10040507 - 10040572
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacatta 142  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||  ||||||| ||| ||||    
T  10040507 ttgtggttgtcgtcgttgttggttgaattagtaagtgttactaaagttgtagaagtatgaatatta 10040572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 19803569 - 19803523
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagt 132  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  19803569 tcgtcgttgttggttgaattagtaagtgttattaaagttgaagaagt 19803523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 29753004 - 29753046
Alignment:
Q  27 ctattattgatgatattgttgattatgaaatatatacatatat 69  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  29753004 ctattattgatgatattgttgattatgaaatatatatatatat 29753046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 131
Target Start/End: Original strand, 24275940 - 24275985
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaag 131  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||    
T  24275940 tcgtcgttgttggttgaattagtaagtgttattaaagttgaagaag 24275985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 22109260 - 22109202
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||||||||||| ||| |||||||||||||| |||| || |||||||| ||||||||||    
T  22109260 tcgtcgttgttgattggattagtaagtgttattaaaattgaagaagtatgaacattatt 22109202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 31502986 - 31502927
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||| |||||||| |||| ||||||  |||||||| ||| |||||||||    
T  31502986 gtcgttgttggttgatttagtaagagttattaaagtcgaagaagtatgaatattattgtt 31502927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 31505552 - 31505493
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||| |||||||| |||| ||||||  |||||||| ||| |||||||||    
T  31505552 gtcgttgttggttgatttagtaagagttattaaagtcgaagaagtatgaatattattgtt 31505493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 20914594 - 20914642
Alignment:
Q  30 ttattgatgatattgttgattatgaaatatatacatatattggataatt 78  Q
    ||||||||||| ||||| |||||||||||||||  ||||||| ||||||    
T  20914594 ttattgatgatgttgttaattatgaaatatatatgtatattgaataatt 20914642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 23148473 - 23148437
Alignment:
Q  33 ttgatgatattgttgattatgaaatatatacatatat 69  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  23148473 ttgatgatgttgttgattatgaaatatatatatatat 23148437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 23560263 - 23560227
Alignment:
Q  33 ttgatgatattgttgattatgaaatatatacatatat 69  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  23560263 ttgatgatgttgttgattatgaaatatatatatatat 23560227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 136; Significance: 7e-71; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 2 - 149
Target Start/End: Complemental strand, 18871694 - 18871547
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggttg 101  Q
    |||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18871694 tagattaaattgaagagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggttg 18871595  T
Q  102 aattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18871594 aattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 18871547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 29795553 - 29795413
Alignment:
Q  9 aattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggttgaattagt 108  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  29795553 aattgatgagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgtcgttggttgaattagt 29795454  T
Q  109 aagtgttactaaagttaaagaagtaagaacattattgttaa 149  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  29795453 aagtgttactaaagttaaagaagtaagaacattattgttaa 29795413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 29799372 - 29799232
Alignment:
Q  9 aattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggttgaattagt 108  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  29799372 aattgatgagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgtcgttggttgaattagt 29799273  T
Q  109 aagtgttactaaagttaaagaagtaagaacattattgttaa 149  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  29799272 aagtgttactaaagttaaagaagtaagaacattattgttaa 29799232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 2 - 147
Target Start/End: Complemental strand, 146897 - 146752
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggttg 101  Q
    |||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  146897 tagatttaattgatgagttagatatatattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttgattg 146798  T
Q  102 aattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  146797 aattagcaagtgttactaaagttaaagaagtaagaacattattgtt 146752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 15166602 - 15166520
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 84  Q
    |||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15166602 tagatttaattgatgaattagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 15166520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 16007912 - 16007830
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 84  Q
    |||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16007912 tagatttaattgatgaattagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 16007830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 10897530 - 10897610
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtag 82  Q
    |||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10897530 tagatttaattgatgaattagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtag 10897610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 18606660 - 18606588
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 149  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18606660 ttgttgttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 18606588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 23666297 - 23666370
Alignment:
Q  76 attgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 149  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23666297 attgttgttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaataacattattgttaa 23666370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 23666181 - 23666261
Alignment:
Q  9 aattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgt 89  Q
    ||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  23666181 aattggtgagttagatatctattattgatgatattattgattatgaaatatatacatatattggataattgtagttgtcgt 23666261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 11302663 - 11302596
Alignment:
Q  22 gatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgt 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11302663 gatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttgtcgt 11302596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 11660639 - 11660569
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11660639 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 11660569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 13255287 - 13255217
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13255287 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 13255217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 14565538 - 14565456
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 84  Q
    |||||| |||||||||  ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14565538 tagatttaattgatgaattagatatctattattaatgatattgttgattatgaaatgtatacatatattggataattgtagtt 14565456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 14565410 - 14565338
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 149  Q
    |||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14565410 ttgttgttatcgttgttgttggttgaattagtaagtattactaaagttaaagaagtaagaacattattgttaa 14565338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 14421059 - 14420989
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  14421059 ttgttgttgtcgtcgttgttggttgaattagcaagtgttactaaagttaaagaagtaagaacattattgtt 14420989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 14421163 - 14421101
Alignment:
Q  22 gatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14421163 gatatctattattgatgatattgttgattatgaaatatatacatatactggataattgtagtt 14421101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 77 - 144
Target Start/End: Original strand, 16109729 - 16109796
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16109729 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaatattatt 16109796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 77 - 144
Target Start/End: Complemental strand, 29003645 - 29003578
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29003645 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaatattatt 29003578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 77 - 144
Target Start/End: Complemental strand, 34956959 - 34956892
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34956959 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaatattatt 34956892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 77 - 144
Target Start/End: Complemental strand, 48742996 - 48742929
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  48742996 ttgttgttgtcgtcgttgtcggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 48742929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 11302535 - 11302465
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  11302535 ttgttgttgtcgtcgttgttggttgaattagcaagcgttactaaagttaaagaagtaagaacattattgtt 11302465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 10897662 - 10897723
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10897662 tcgtcgttgatggttgaattagcaagtgttactaaagttaaagaagtaagaacattattgtt 10897723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 77 - 146
Target Start/End: Complemental strand, 16572926 - 16572857
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgt 146  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  16572926 ttgttgttgtcgtcgttgttggttgaattagtaagtgttattaaagttgaagaagtaagaacattattgt 16572857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 77 - 146
Target Start/End: Original strand, 16592736 - 16592805
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgt 146  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  16592736 ttgttgttgtcgtcgttgttggttgaattagtaagtgttattaaagttgaagaagtaagaacattattgt 16592805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 77 - 144
Target Start/End: Original strand, 833753 - 833820
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  833753 ttgttgttgtcgtcgttgttggttgaattaataagtgttactaaagttaaagaagtaagaatattatt 833820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 77 - 144
Target Start/End: Original strand, 1198933 - 1199000
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  1198933 ttgttgttgtcgtcgttgttggttgaattaataagtgttactaaagttaaagaagtaagaatattatt 1199000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 18606788 - 18606729
Alignment:
Q  30 ttattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgt 89  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18606788 ttattgatgatgttgttgattatgaaatatatacatatattggataattgtagttgtcgt 18606729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 15166478 - 15166408
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  15166478 ttgttgttgtcgtcgttgttgattgaattagcaagtgttactaaagttaaagaagtaagaatattattgtt 15166408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 77 - 145
Target Start/End: Original strand, 13850332 - 13850400
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattg 145  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||    
T  13850332 ttgtggttgtcgtcgttgttggttgaattagtaagtgttattaaagttgaagaagtatgaacattattg 13850400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 16007732 - 16007681
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaa 137  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16007732 tcgtcgttgttggttgaattagcaagtgttactaaagttaaagaagtaagaa 16007681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 837791 - 837849
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||    
T  837791 tcgtcgttgttggttgaattaataagtgttaataaagttaaagaagtaagaatattatt 837849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 1202971 - 1203029
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||    
T  1202971 tcgtcgttgttggttgaattaataagtgttaataaagttaaagaagtaagaatattatt 1203029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 35365698 - 35365639
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||| |||||||| |||| ||||||| |||||||| ||| |||||||||    
T  35365698 gtcgttgttggttgatttagtaagagttattaaagttgaagaagtaggaatattattgtt 35365639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 4992911 - 4992853
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgt 146  Q
    ||||||||||||||| |||||||| |||| ||||||| |||||||| ||| ||||||||    
T  4992911 gtcgttgttggttgatttagtaagagttattaaagttgaagaagtatgaatattattgt 4992853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 16005740 - 16005682
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgt 146  Q
    ||||||||||||||| |||||||| |||| ||||||| |||||||| ||| ||||||||    
T  16005740 gtcgttgttggttgatttagtaagagttattaaagttgaagaagtatgaatattattgt 16005682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 14189719 - 14189780
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||||||||||||||| |||||||||||||| |||| || ||| || | |||||||||||||    
T  14189719 tcgtcgttgttggttggattagtaagtgttattaaaattgaaggaggatgaacattattgtt 14189780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 14192474 - 14192535
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||||||||||||||| |||||||||||||| |||| || ||| || | |||||||||||||    
T  14192474 tcgtcgttgttggttggattagtaagtgttattaaaattgaaggaggatgaacattattgtt 14192535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 13678204 - 13678156
Alignment:
Q  30 ttattgatgatattgttgattatg-aaatatatacatatattggataat 77  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||||||    
T  13678204 ttattgatgatgttgttgattatgaaaatttatacatatattggataat 13678156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 8775723 - 8775664
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||| |||||||| |||| ||||||  |||||||| ||| |||||||||    
T  8775723 gtcgttgttggttgatttagtaagagttattaaagtcgaagaagtatgaatattattgtt 8775664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 21744005 - 21744064
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||| |||||||| |||| ||||||  |||||||| ||| |||||||||    
T  21744005 gtcgttgttggttgatttagtaagagttattaaagtcgaagaagtatgaatattattgtt 21744064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 16668811 - 16668856
Alignment:
Q  33 ttgatgatattgttgattatgaaatatatacatatattggataatt 78  Q
    |||||||| |||||||||||||||||||||  ||||||||| ||||    
T  16668811 ttgatgatgttgttgattatgaaatatatatgtatattggagaatt 16668856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 45185375 - 45185326
Alignment:
Q  29 attattgatgatattgttgattatgaaatatatacatatattggataatt 78  Q
    ||||||| |||| |||||||||||||||||||||  ||||||| ||||||    
T  45185375 attattgttgatgttgttgattatgaaatatatatttatattgaataatt 45185326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 133; Significance: 4e-69; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 15533609 - 15533469
Alignment:
Q  9 aattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggttgaattagt 108  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15533609 aattgatgagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgtcgttggttgaattagt 15533510  T
Q  109 aagtgttactaaagttaaagaagtaagaacattattgttaa 149  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  15533509 aagtgttactaaagttaaagaagtaagaacattattgttaa 15533469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 36037350 - 36037202
Alignment:
Q  1 atagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggtt 100  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36037350 atagatttaattgatgagttagatatcttttattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggtt 36037251  T
Q  101 gaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 149  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36037250 gaattagtaagtgttactaaagttaaagaggtaagaacattattgttaa 36037202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 54 - 149
Target Start/End: Original strand, 49548816 - 49548911
Alignment:
Q  54 aaatatatacatatattggataattgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  49548816 aaatatatacatatattggataattgtagttatcgtcgttgttggttgaattagtaagtgttactaaaggtaaagaagtaagaacattattgttaa 49548911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 18211947 - 18211877
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18211947 ttgttgttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 18211877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 24048106 - 24048176
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24048106 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 24048176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 15989545 - 15989484
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15989545 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 15989484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 77 - 144
Target Start/End: Original strand, 4831994 - 4832061
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4831994 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaatattatt 4832061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 77 - 144
Target Start/End: Original strand, 4835289 - 4835356
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4835289 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaatattatt 4835356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 77 - 144
Target Start/End: Complemental strand, 14047541 - 14047474
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  14047541 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaattaagaatattatt 14047474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 77 - 144
Target Start/End: Complemental strand, 30146105 - 30146038
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  30146105 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaaggaagaatattatt 30146038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 18212061 - 18212014
Alignment:
Q  30 ttattgatgatattgttgattatgaaatatatacatatattggataat 77  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18212061 ttattgatgatgttgttgattatgaaatatatacatatattggataat 18212014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 33685124 - 33685180
Alignment:
Q  91 gttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||| |||||||||||||| ||||||| |||||||| |||||||||||||    
T  33685124 gttgttggttggattagtaagtgttattaaagttgaagaagtatgaacattattgtt 33685180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 20900137 - 20900192
Alignment:
Q  92 ttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||| ||||||||| ||||||| |||||||| |||||||||||||    
T  20900137 ttgttggttgaattaataagtgttattaaagttgaagaagtatgaacattattgtt 20900192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 27027347 - 27027292
Alignment:
Q  92 ttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||| ||||||||| ||||||| |||||||| |||||||||||||    
T  27027347 ttgttggttgaattaataagtgttattaaagttgaagaagtatgaacattattgtt 27027292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 3336876 - 3336815
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||| ||||||||||||||||||||| ||||||| ||||||   |||||||||||||    
T  3336876 tcgtcgttgctggttgaattagtaagtgttattaaagttgaagaagcgtgaacattattgtt 3336815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 4828705 - 4828766
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaa---agaagtaagaacattatt 144  Q
    |||||||||||||||||||||||||||| | ||||||||||   ||||||||||| ||||||    
T  4828705 tcgtcgttgttggttgaattagtaagtgattctaaagttaaattagaagtaagaatattatt 4828766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 147
Target Start/End: Complemental strand, 17142608 - 17142574
Alignment:
Q  113 gttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||||||||||||||||||||||||||||||||||    
T  17142608 gttactaaagttaaagaagtaagaacattattgtt 17142574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 143
Target Start/End: Complemental strand, 13877509 - 13877452
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattat 143  Q
    |||||||||||| ||| |||||||||||||| |||| || |||||||| |||||||||    
T  13877509 tcgtcgttgttgattggattagtaagtgttattaaaattgaagaagtatgaacattat 13877452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 13881208 - 13881147
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||| |||||| ||| |||||||||||||| |||| || |||||||| |||||||||||||    
T  13881208 tcgtcattgttgattggattagtaagtgttattaaaattgaagaagtatgaacattattgtt 13881147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 4170425 - 4170366
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||| |||||||| |||| ||||||  |||||||| ||| |||||||||    
T  4170425 gtcgttgttggttgatttagtaagagttattaaagtcgaagaagtatgaatattattgtt 4170366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 14698150 - 14698091
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||| |||||||| |||| ||||||  |||||||| ||| |||||||||    
T  14698150 gtcgttgttggttgatttagtaagagttattaaagtcgaagaagtatgaatattattgtt 14698091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 28916853 - 28916798
Alignment:
Q  89 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    ||||||||| ||| |||||||||||||| |||| || |||||||| ||||||||||    
T  28916853 tcgttgttgattggattagtaagtgttattaaaattgaagaagtatgaacattatt 28916798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 31131995 - 31132054
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||| |||||||| |||| ||||||  |||||||| ||| |||||||||    
T  31131995 gtcgttgttggttgatttagtaagagttattaaagtcgaagaagtatgaatattattgtt 31132054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 41791101 - 41791042
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||| |||||||| |||| |||| || |||||||| ||| |||||||||    
T  41791101 gtcgttgttggttgatttagtaagagttattaaaattgaagaagtatgaatattattgtt 41791042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 43258613 - 43258672
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||| ||||||||| ||||||||||||| ||||||| |||||||| ||| |||| ||||    
T  43258613 gtcgtcgttggttgatttagtaagtgttattaaagttgaagaagtatgaatattaatgtt 43258672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 28382331 - 28382271
Alignment:
Q  84 tatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||||| ||||||| ||| |||||||||||||| |||| || |||||||| ||| ||||||    
T  28382331 tatcgttgttgttgattggattagtaagtgttattaaaattgaagaagtatgaatattatt 28382271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 128; Significance: 4e-66; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 2 - 149
Target Start/End: Complemental strand, 4476193 - 4476046
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggttg 101  Q
    |||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4476193 tagattaaattgaagagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggttg 4476094  T
Q  102 aattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 149  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||    
T  4476093 aattagtaagtgttactaaagattaagaagtaagaacattattgttaa 4476046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 12941631 - 12941471
Alignment:
Q  1 atagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatat------------tggataattgtagttatcg 88  Q
    ||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||            |||||||||||||||||||    
T  12941631 atagatttaattgatgagttagatatttattattgatgatattgttgattatgaaatatatatatatatatatatatatattggataattgtagttatcg 12941532  T
Q  89 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12941531 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 12941471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 28290560 - 28290640
Alignment:
Q  9 aattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgt 89  Q
    |||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28290560 aattgatgaattggatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttgtcgt 28290640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 24266504 - 24266445
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24266504 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 24266445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 221462 - 221392
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  221462 ttgttgttgtcgttgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 221392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 23351816 - 23351758
Alignment:
Q  89 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23351816 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 23351758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 77 - 144
Target Start/End: Original strand, 29848909 - 29848976
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29848909 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaaaaacattatt 29848976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 13763687 - 13763617
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  13763687 ttgttgttgtcgtcgttgttggttaaattagtaagtgttgctaaagttaaagaagtaagaacattattgtt 13763617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 28290701 - 28290771
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  28290701 ttgttgttgtcgtcgttgttggttgaattagcaagcgttactaaagttaaagaagtaagaacattattgtt 28290771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 77 - 144
Target Start/End: Original strand, 16133862 - 16133929
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  16133862 ttgttgttgtcgtcgttgttggttgaattaataagtgttactaaagttaaagaagtaggaacattatt 16133929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 77 - 144
Target Start/End: Original strand, 29417306 - 29417373
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  29417306 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaaattaaagaagtaagaatattatt 29417373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 144
Target Start/End: Original strand, 19444538 - 19444605
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  19444538 ttgttgttgtcgttgttgttggttgaattagtaagtgttactaaagttaaagaagtaggaagattatt 19444605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 23621625 - 23621683
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||||||||||| ||| |||||||||||||| |||| || |||||||| ||||||||||    
T  23621625 tcgtcgttgttgattggattagtaagtgttattaaaattgaagaagtatgaacattatt 23621683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 25395922 - 25395873
Alignment:
Q  28 tattattgatgatattgttgattatgaaatatatacatatattggataat 77  Q
    ||||||||||||| ||||||||||||| |||||||  |||||||||||||    
T  25395922 tattattgatgatgttgttgattatgagatatatatgtatattggataat 25395873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 2288561 - 2288620
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||| ||||||||| |||||||||||| |||||| | |||||||| ||| |||||||||    
T  2288561 gtcgtcgttggttgatttagtaagtgtttctaaagatgaagaagtatgaatattattgtt 2288620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 8717439 - 8717496
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||| |||||||||||||||||||||||||| |||| || |||||||| ||| ||||||    
T  8717439 tcgttgttgttggttgaattagtaagtgttattaaa-ttgaagaagtatgaatattatt 8717496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 22346478 - 22346441
Alignment:
Q  34 tgatgatattgttgattatgaaatatatacatatattg 71  Q
    |||||||||||||||||||||||||||||  |||||||    
T  22346478 tgatgatattgttgattatgaaatatatatgtatattg 22346441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 15538697 - 15538629
Alignment:
Q  79 gtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||||| | ||||| ||||||||| ||||||||||||  ||||| | |||||||| ||| |||||||||    
T  15538697 gtagttgttgtcgtcgttggttgatttagtaagtgtttttaaagatgaagaagtatgaatattattgtt 15538629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 25749625 - 25749581
Alignment:
Q  34 tgatgatattgttgattatgaaatatatacatatattggataatt 78  Q
    ||||||| |||||||||||||||||||||  ||||||| ||||||    
T  25749625 tgatgatgttgttgattatgaaatatatatgtatattgaataatt 25749581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 3199 - 3345
Alignment:
Q  3 agattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggttga 102  Q
    ||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3199 agattaaattgaagagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgtcgttgttggttga 3298  T
Q  103 attagtaagtgttactaaagttaaagaagtaagaacattattgttaa 149  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||    
T  3299 attagtaagtgttactaaagattaagaagtaagaacattattgttaa 3345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 54 - 149
Target Start/End: Complemental strand, 524 - 429
Alignment:
Q  54 aaatatatacatatattggataattgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 149  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  524 aaatatatacatatattggataattgtagttttcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgttaa 429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 110021 - 109934
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgt 89  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  110021 tagatttaattgatgagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttgtcgt 109934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 109873 - 109803
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  109873 ttgttgttgtcgtcgttgttggttgaattagcaagtgttactaaagttaaagaagtaagaacattattgtt 109803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 37166 - 37248
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 84  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37166 tagatttaattgatgagttagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 37248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 37383 - 37453
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  37383 ttgttgttgtcgtcgttgttggttgaattaacaagtgttactaaagttaaagaagtaagaacattattgtt 37453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 27942522 - 27942609
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgt 89  Q
    |||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27942522 tagatttaattgatgaattagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagttgtcgt 27942609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 8729361 - 8729443
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 84  Q
    |||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8729361 tagatttaattgatgaattagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 8729443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 44476095 - 44476013
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 84  Q
    |||||| |||||||||  | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  44476095 tagatttaattgatgaattggatatctattattgatgatattgttgatcatgaaatatatacatatattggataattgtagtt 44476013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 44479357 - 44479275
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 84  Q
    |||||| |||||||||  | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  44479357 tagatttaattgatgaattggatatctattattgatgatattgttgatcatgaaatatatacatatattggataattgtagtt 44479275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 20453969 - 20453899
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20453969 ttgttgttttcgtcgttgttggttgaattagtaagtgctactaaagttaaagaagtaagaacattattgtt 20453899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 21862045 - 21862115
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  21862045 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagggaaagaagtaagaacattattgtt 21862115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 44475959 - 44475901
Alignment:
Q  89 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  44475959 tcgttgttggttgaattagcaagtgttactaaagttaaagaagtaagaacattattgtt 44475901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 44479221 - 44479163
Alignment:
Q  89 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  44479221 tcgttgttggttgaattagcaagtgttactaaagttaaagaagtaagaacattattgtt 44479163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 8729469 - 8729530
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  8729469 tcgtcgttgttgattgaattagcaagtgttactaaagttaaagaagtaagaatattattgtt 8729530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 20459579 - 20459521
Alignment:
Q  89 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20459579 tcgttgtttcttgaattagtaagtgttactaaagttaaagaagtaacaacattattgtt 20459521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 43111755 - 43111685
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| ||||||||||||||||||||||||||||||| | ||||| |||||||| |||||||||||||    
T  43111755 ttgttgttgtcgtcgttgttggttgaattagtaagtgttatttaagttgaagaagtatgaacattattgtt 43111685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 44431372 - 44431311
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||| ||||    
T  44431372 tcgtcgttgttggttgaattagtaagtgttactaaagttgaagaagtatgaatattaatgtt 44431311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 32949452 - 32949394
Alignment:
Q  89 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||||||||||||||||||||||||||| ||||||| |||||||  |||||||||||||    
T  32949452 tcgttgttggttgaattagtaagtgttattaaagttgaagaagtgtgaacattattgtt 32949394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 19881618 - 19881557
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||  ||| |||||||||    
T  19881618 tcgtcgttgttggttgaattagtaagtgttattaaagttgaagaagtgtgaatattattgtt 19881557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 137
Target Start/End: Original strand, 38186330 - 38186390
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaa 137  Q
    |||| ||| ||||| |||||||||||||||||||||||||| |||||||| ||||||||||    
T  38186330 ttgttgttgtcgtcattgttggttgaattagtaagtgttaccaaagttaatgaagtaagaa 38186390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 28853376 - 28853317
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||| |||||||| |||||||||||| |||||||| ||| |||||||||    
T  28853376 gtcgttgttggttgatttagtaagagttactaaagttgaagaagtatgaatattattgtt 28853317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 365349 - 365406
Alignment:
Q  90 cgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||||||||||| ||||||||||| || ||||||| ||||| || |||||||||||||    
T  365349 cgttgttggttggattagtaagtgctattaaagtttaagaaatatgaacattattgtt 365406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 6608941 - 6609000
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||| |||||||| |||| ||||||  |||||||| ||| |||||||||    
T  6608941 gtcgttgttggttgatttagtaagagttattaaagtcgaagaagtatgaatattattgtt 6609000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 7301840 - 7301899
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||| |||||||| |||| ||||||| |||||||| ||| ||| |||||    
T  7301840 gtcgttgttggttgatttagtaagagttattaaagttgaagaagtatgaatatttttgtt 7301899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 86 - 145
Target Start/End: Original strand, 15005088 - 15005147
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattg 145  Q
    |||| ||||||| ||| |||||||||||||| |||| || |||||||| |||||||||||    
T  15005088 tcgttgttgttgattggattagtaagtgttattaaaattgaagaagtatgaacattattg 15005147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 45135627 - 45135686
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||| |||||||| |||| ||||||  |||||||| ||| |||||||||    
T  45135627 gtcgttgttggttgatttagtaagagttattaaagtcgaagaagtatgaatattattgtt 45135686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 24708418 - 24708476
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||||||||||| ||| |||||||||||||| |||| || |||||||| ||| ||||||    
T  24708418 tcgtcgttgttgattggattagtaagtgttattaaaattgaagaagtatgaatattatt 24708476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 4e-32; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 16371365 - 16371283
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 84  Q
    |||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16371365 tagatttaattgatgaattagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 16371283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 20438880 - 20438962
Alignment:
Q  2 tagattcaattgatgagctagatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 84  Q
    |||||| |||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20438880 tagatttaattgatgaattggatatctattattgatgatattgttgattatgaaatatatacatatattggataattgtagtt 20438962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 19209323 - 19209253
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19209323 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 19209253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 28311920 - 28311850
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28311920 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 28311850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 77 - 144
Target Start/End: Original strand, 13529104 - 13529171
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13529104 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaggaacattatt 13529171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 16371186 - 16371127
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16371186 gtcgttgttggttgaattagcaagtgttactaaagttaaagaagtaagaacattattgtt 16371127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 20439012 - 20439073
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  20439012 tcgtcgttgttggttgaattagcaagtgttactaaagttaaagaagttagaacattattgtt 20439073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 77 - 144
Target Start/End: Complemental strand, 29534246 - 29534179
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  29534246 ttgttgttgtcgtcgttgttggtttaattagtaagtgttactaaagttaaagaagtaagaatattatt 29534179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 144
Target Start/End: Complemental strand, 32649596 - 32649529
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||| ||| |||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||    
T  32649596 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaaattaaagaattaagaatattatt 32649529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 16400463 - 16400393
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| |||||||||||||||||||||||||||| || ||||||| ||||||| ||||||||||||||    
T  16400463 ttgttgttgtcgtcgttgttggttgaattagtaagtgctattaaagttgaagaagtgagaacattattgtt 16400393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 28204955 - 28205016
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||||||||||||||| |||||||||||||| |||| || |||||||| |||||||||||||    
T  28204955 tcgtcgttgttggttggattagtaagtgttattaaatttgaagaagtatgaacattattgtt 28205016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 18251911 - 18251856
Alignment:
Q  92 ttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||| ||||||||| ||||||| |||||||| |||||||||||||    
T  18251911 ttgttggttgaattaataagtgttattaaagttgaagaagtatgaacattattgtt 18251856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 18269914 - 18269859
Alignment:
Q  92 ttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||| ||||||||| ||||||| |||||||| |||||||||||||    
T  18269914 ttgttggttgaattaataagtgttattaaagttgaagaagtatgaacattattgtt 18269859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 18274592 - 18274537
Alignment:
Q  92 ttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||| ||||||||| ||||||| |||||||| |||||||||||||    
T  18274592 ttgttggttgaattaataagtgttattaaagttgaagaagtatgaacattattgtt 18274537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 20578890 - 20578831
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||| |||||||| |||| ||||||| |||||||| ||| |||||||||    
T  20578890 gtcgttgttggttgatttagtaagagttattaaagttgaagaagtatgaatattattgtt 20578831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 20586583 - 20586524
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||| |||||||| |||| ||||||| |||||||| ||| |||||||||    
T  20586583 gtcgttgttggttgatttagtaagagttattaaagttgaagaagtatgaatattattgtt 20586524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 20900735 - 20900680
Alignment:
Q  92 ttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||| ||||||||| ||||||| |||| ||| |||||||||||||    
T  20900735 ttgttggttgaattaataagtgttattaaagttgaagaggtatgaacattattgtt 20900680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 21181812 - 21181870
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    ||||| |||||||||||| |||||||||||| ||||||| |||||||  ||||||||||    
T  21181812 tcgtcattgttggttgaaatagtaagtgttattaaagttgaagaagtttgaacattatt 21181870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 16397625 - 16397674
Alignment:
Q  98 gttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||||||||||||||| || ||||||| |||||||| |||||||||||||    
T  16397625 gttgaattagtaagtgctattaaagttgaagaagtatgaacattattgtt 16397674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 293590 - 293531
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||| ||||||||| ||||||||||||| ||||||| |||||||| ||| |||| ||||    
T  293590 gtcgtcgttggttgatttagtaagtgttattaaagttgaagaagtatgaatattaatgtt 293531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 45306720 - 45306662
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgt 146  Q
    ||||||||||||||| |||||||| |||| ||||||| ||||||||  || ||||||||    
T  45306720 gtcgttgttggttgatttagtaagagttattaaagttgaagaagtataaatattattgt 45306662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 10581 - 10651
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10581 ttgttgttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 10651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 10512 - 10560
Alignment:
Q  30 ttattgatgatattgttgattatgaaatatatacatatattggataatt 78  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10512 ttattgatgatgttgttgattatgaaatatatacatatattggataatt 10560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 21038 - 20968
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21038 ttgttgttgtcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 20968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 2476 - 2406
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2476 ttgttgttgtcgtcgttgttggttgaattagtaagtgtttctaaagttaaagaagtaagaacattattgtt 2406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 4428 - 4489
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4428 tcgttgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 4489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 223874 - 223934
Alignment:
Q  87 cgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  223874 cgtcgttgttggttgaattagtaagagttactaaagttaaagaagtaagaacattattgtt 223934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 41535 - 41593
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41535 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaggaacattatt 41593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 145838 - 145780
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  145838 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaatattatt 145780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 887 - 942
Alignment:
Q  89 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  887 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaaaattatt 942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 93 - 147
Target Start/End: Complemental strand, 1612 - 1558
Alignment:
Q  93 tgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  1612 tgttggttgaattagcaagtgttactaaagttaaagaagtaagaacattattgtt 1558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 1817 - 1758
Alignment:
Q  30 ttattgatgatattgttgattatgaaatatatacatatattggataattgtagttatcgt 89  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  1817 ttattgatgatgttgttgattatgaaatatatacatatattggataattgttgttgtcgt 1758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 13731 - 13666
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacatta 142  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  13731 ttgtggttttcgtcgttgttggttgaattagtaagtgttactaaagttgaagaagtatgaacatta 13666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 11726 - 11661
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacatta 142  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  11726 ttgtggttttcgtcgttgttggttgaattagtaagtgttactaaagttgaagaagtatgaacatta 11661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 50515 - 50454
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||    
T  50515 tcgtcgttgttggttgaattagtaagtgttactaaagttgaagaagtgtgaacattattgtt 50454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 2138 - 2208
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||||| ||||| || |||||||||||||    
T  2138 ttgttgttgtcgtcgttgttggttgaattagtaagtgttattaaagttgaagaattatgaacattattgtt 2208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 137349 - 137279
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||| ||||    
T  137349 ttgtggttgtcgtcgttgttggttgaattagtaagtgttactaaagttgaagaagtatgaatattaatgtt 137279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 35262 - 35323
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||||||||||||||| |||||||||||||| ||||||| |||||||| |||||||||||||    
T  35262 tcgtcgttgttggttggattagtaagtgttattaaagttgaagaagtatgaacattattgtt 35323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 3800 - 3752
Alignment:
Q  96 tggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3800 tggttgaattagtaagtgttactaaagttaaagaagtaggaacattatt 3752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 6563 - 6498
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacatta 142  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||  ||||||| ||| ||||    
T  6563 ttgtggttgtcgtcgttgttggttgaattagtaagtgttactaaagttgtagaagtatgaatatta 6498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 16301 - 16348
Alignment:
Q  30 ttattgatgatattgttgattatgaaatatatacatatattggataat 77  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||    
T  16301 ttattgatgaagttgttgattatgaaatatatacatatattggataat 16348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 59058 - 59012
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagt 132  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  59058 tcgtcgttgttggttgaattagtaagtgttattaaagttgaagaagt 59012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 124
Target Start/End: Complemental strand, 10363 - 10316
Alignment:
Q  77 ttgtagttatcgtcgttgttggttgaattagtaagtgttactaaagtt 124  Q
    |||| ||| ||||||||||||||||||||||||||| |||||||||||    
T  10363 ttgtggttgtcgtcgttgttggttgaattagtaagtattactaaagtt 10316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 1811 - 1753
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||||||||||||||| ||||||||||| || ||||||| ||||| || ||||||||||    
T  1811 tcgtcgttgttggttggattagtaagtgctattaaagtttaagaaatatgaacattatt 1753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 12075 - 12136
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||||||||||| ||| |||||||||||||| |||| || |||||||| ||||| |||||||    
T  12075 tcgtcgttgttgattggattagtaagtgttattaaaattgaagaagtatgaacagtattgtt 12136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 14334 - 14395
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||||||||||| ||| |||||||||||||| |||| || |||||||| ||||| |||||||    
T  14334 tcgtcgttgttgattggattagtaagtgttattaaaattgaagaagtatgaacagtattgtt 14395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 22511 - 22572
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||||||||||||||| |||||||| || || ||||||| ||||| || |||||||||||||    
T  22511 tcgtcgttgttggttggattagtaaatgctattaaagtttaagaaatatgaacattattgtt 22572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 5849 - 5800
Alignment:
Q  28 tattattgatgatattgttgattatgaaatatatacatatattggataat 77  Q
    |||| |||||||| |||||||||||||||||||||  |||||||||||||    
T  5849 tattgttgatgatgttgttgattatgaaatatatatgtatattggataat 5800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 51053 - 51004
Alignment:
Q  28 tattattgatgatattgttgattatgaaatatatacatatattggataat 77  Q
    ||||||||||||| ||||||||||||| |||||||  |||||||||||||    
T  51053 tattattgatgatgttgttgattatgagatatatatgtatattggataat 51004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 47987 - 47934
Alignment:
Q  91 gttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattatt 144  Q
    |||||||||| |||||||||||| |  |||||||||||||||||||| ||||||    
T  47987 gttgttggttaaattagtaagtgattttaaagttaaagaagtaagaatattatt 47934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 40663 - 40724
Alignment:
Q  86 tcgtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||||||||||||||  ||||||||||| || ||||||| ||||| || |||||||||||||    
T  40663 tcgtcgttgttggttagattagtaagtgctattaaagttgaagaaatatgaacattattgtt 40724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 97 - 49
Alignment:
Q  30 ttattgatgatattgttgattatg-aaatatatacatatattggataat 77  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||||||    
T  97 ttattgatgatgttgttgattatgaaaatttatacatatattggataat 49  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 11546 - 11601
Alignment:
Q  92 ttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||| |||||||| |||| ||||||| |||||||| ||| |||||||||    
T  11546 ttgttggttgatttagtaagagttattaaagttgaagaagtatgaatattattgtt 11601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 32590 - 32531
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||| |||||||| |||| ||||||  |||||||| ||| |||||||||    
T  32590 gtcgttgttggttgatttagtaagagttattaaagtcgaagaagtatgaatattattgtt 32531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 2583 - 2524
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||| ||||||||| ||||||||||||| ||||||| |||||||| ||| |||| ||||    
T  2583 gtcgtcgttggttgatttagtaagtgttattaaagttgaagaagtatgaatattaatgtt 2524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 82222 - 82281
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||||||||||||| |||||||| |||| ||||||  |||||||| ||| |||||||||    
T  82222 gtcgttgttggttgatttagtaagagttattaaagtcgaagaagtatgaatattattgtt 82281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 6376 - 6435
Alignment:
Q  88 gtcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    ||||| ||||||||| ||||||||||||| ||||||| |||||||| ||| || ||||||    
T  6376 gtcgtcgttggttgatttagtaagtgttattaaagttgaagaagtatgaatatcattgtt 6435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 9220 - 9162
Alignment:
Q  89 tcgttgttggttgaattagtaagtgttactaaagttaaagaagtaagaacattattgtt 147  Q
    |||||||| |||| |||||||||||||| |||| || ||| |||| |||||||||||||    
T  9220 tcgttgttagttggattagtaagtgttattaaaattgaaggagtatgaacattattgtt 9162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 44500 - 44458
Alignment:
Q  29 attattgatgatattgttgattatgaaatatatacatatattg 71  Q
    ||||||| ||||||||||||||||||||||||||  |||||||    
T  44500 attattgttgatattgttgattatgaaatatatatgtatattg 44458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1290 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1290
Description:

Target: scaffold1290; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 1527 - 1576
Alignment:
Q  29 attattgatgatattgttgattatgaaatatatacatatattggataatt 78  Q
    ||||||| |||| |||||||||||||||||||||  ||||||| ||||||    
T  1527 attattgttgatgttgttgattatgaaatatatatttatattgaataatt 1576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 177797 - 177752
Alignment:
Q  33 ttgatgatattgttgattatgaaatatatacatatattggataatt 78  Q
    |||||||| |||||||||||||||||||||  ||||||||| ||||    
T  177797 ttgatgatgttgttgattatgaaatatatatgtatattggagaatt 177752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 5673 - 5721
Alignment:
Q  30 ttattgatgatattgttgattatgaaatatatacatatattggataatt 78  Q
    |||||| |||| ||||| |||||||||||||||  ||||||||||||||    
T  5673 ttattgttgatgttgttaattatgaaatatatatgtatattggataatt 5721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 9442 - 9394
Alignment:
Q  30 ttattgatgatattgttgattatgaaatatatacatatattggataatt 78  Q
    ||||||||||| ||||| |||||||||||||||  ||||||| ||||||    
T  9442 ttattgatgatgttgttaattatgaaatatatatgtatattgaataatt 9394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 13515 - 13467
Alignment:
Q  30 ttattgatgatattgttgattatgaaatatatacatatattggataatt 78  Q
    ||||||||||| ||||| |||||||||||||||  ||||||| ||||||    
T  13515 ttattgatgatgttgttaattatgaaatatatatgtatattgaataatt 13467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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