View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21683_high_1_N (Length: 750)
Name: NF21683_high_1_N
Description: NF21683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21683_high_1_N |
 | |
|
| [»] scaffold0140 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 659; Significance: 0; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 659; E-Value: 0
Query Start/End: Original strand, 26 - 720
Target Start/End: Complemental strand, 3377564 - 3376870
Alignment:
| Q |
26 |
catcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccaccaat |
125 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3377564 |
catcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccaccaat |
3377465 |
T |
|
| Q |
126 |
gtatttccttccaataaacacttttggtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatgcattgac |
225 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
3377464 |
gtatttccttccaataaacacttttggtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttaaatcctaaatgcattgac |
3377365 |
T |
|
| Q |
226 |
acatctctctcatcaacccttatgcctaatcctttcaaaaccatcctaactttgcaacaatcctcataagtttttctcaccatacgtagacttgtgaaat |
325 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
3377364 |
acatctctctcatcaacccttatgcctaatcctttcaaaaccatcctaactatgcaacaatcctcataagtttttctcaccatacgcagacttgtgaaat |
3377265 |
T |
|
| Q |
326 |
acaacactactttttccttcttctcataaggggcaatcttgaaattcacaacattatcacttatatacttttcctcaaaaaagaatcttttagcatccat |
425 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
3377264 |
acaacactgctttttccttcttctcataaggggcaatcttgaaattcacaacattatcactaatattcttttcctcaaaaaagaatcttttagcatccat |
3377165 |
T |
|
| Q |
426 |
cgcctcttgcttttcttgcaatggcttcttaaatgaagacaccactttacaatcatcaaaatttaaaacttcaacattgagatttaagtcatttgatccg |
525 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3377164 |
cgcctcttgcttctcttgcaatggcttcttaaatgaagacaccactttacaatcatcaaaatttaaaacttcaacattgagatttaagtcatttgatccg |
3377065 |
T |
|
| Q |
526 |
tcctcaataatcatatgatccaactttggtttgtgtaaatcaatgccatcatcattctccatgaagctagtctttgaaggatcaacatggccattgacat |
625 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3377064 |
tcctcaataatcatatgatccaactttggtttgtgtaaatcaataccatcatcattctccatgaagctagtctttgaaggatcaacatggccattgacat |
3376965 |
T |
|
| Q |
626 |
taacatcaaaagacaaacttcttaattgatttggtgattgaaaaggacttgtatcttcaagtccttccattagttcccatgtgttgatgatgtcc |
720 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3376964 |
taacatcaaaagagaaacttcttaattgatttggtgattgaaaaggacttgtatcttcaagtccttccattagttcccatgtgttgatgatgtcc |
3376870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 26 - 222
Target Start/End: Original strand, 32154951 - 32155147
Alignment:
| Q |
26 |
catcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccaccaat |
125 |
Q |
| |
|
|||||| || ||||||||| |||| |||||||||||||||| |||||||||||||| || |||||||| | |||||||||||||||||||||||||| |
|
|
| T |
32154951 |
catcacatctttcaatgtcatcaatcctttcacaacaatcaagcaatttctcaagcttcttgtcatcatgaagtttctgaatttcctcaactccaccaac |
32155050 |
T |
|
| Q |
126 |
gtatttccttccaataaacacttttggtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatgcatt |
222 |
Q |
| |
|
||||||| || ||| ||||||||||||||||| ||||||||||||| | ||||||||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
32155051 |
gtatttcttttcaagaaacacttttggtaatcatcctttaccatagtactcttcaccaagtaactctttaagctcttccttaaatcctaaatgcatt |
32155147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 26 - 222
Target Start/End: Complemental strand, 14608503 - 14608308
Alignment:
| Q |
26 |
catcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccaccaat |
125 |
Q |
| |
|
|||||||||||||||||| || || ||||||||| |||| | |||||||||| ||| || |||||| | | |||||||||||| |||||||| ||| |
|
|
| T |
14608503 |
catcacctccttcaatgttgttaatcctttcacaataatcgagcaatttctcaaacttcttgtcatcacaaagtctctgaatttcct-aactccacaaat |
14608405 |
T |
|
| Q |
126 |
gtatttccttccaataaacacttttggtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatgcatt |
222 |
Q |
| |
|
||||||| || ||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
14608404 |
gtatttcttttcaaaaaacacttttggtaatcctcctttaccatagtatccttcaccaagtaactctttaagctcttccttgaattctaaatgcatt |
14608308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 340; Significance: 0; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 27 - 576
Target Start/End: Complemental strand, 21362171 - 21361616
Alignment:
| Q |
27 |
atcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccaccaatg |
126 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||| || |||||||| | |||||||||||||||||||||| ||||| |
|
|
| T |
21362171 |
atcacctccttcaatgtcgtcaatcctttcacaacaatcaagtaattactcaagcttcttgtcatcatgaagtttctgaatttcctcaactccagcaatg |
21362072 |
T |
|
| Q |
127 |
tatttccttccaataaacacttttggtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatgcattgaca |
226 |
Q |
| |
|
| |||| ||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||| | |||||| |||||||||||||| ||||||| |
|
|
| T |
21362071 |
tttttctttccaataaacacttttggtaatcctcctttaccatagtaccctccaccaagtaactcttttaactcttcattgaatcctaaatgtattgaca |
21361972 |
T |
|
| Q |
227 |
catctctctcatcaacccttatgcctaatcctttcaaaaccatcctaactttgcaacaatcctcataagtttttctcaccatacgtagacttgtgaaata |
326 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
21361971 |
catatctctcatcaacccttatgcctaatcctttcaaaatcatcctaactttgcaacaattctcataagtttttctcaccatgcgtaggcttgtgaaata |
21361872 |
T |
|
| Q |
327 |
caacactactttttccttcttctcataaggggcaatcttgaaattcac---aacattatcacttatatacttttcctcaa---aaaagaatcttttagca |
420 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| ||||||||||| | |||| | | |
|
|
| T |
21361871 |
caacaccactttttccttcttctcataaggggcaatcttgaaattcacaacaacattatcaataatattcttttcctcaatttttttttttttttttgta |
21361772 |
T |
|
| Q |
421 |
tccatcgcctcttgcttttcttgcaatggcttcttaaatgaagacaccactttacaatcatcaaaatttaaaacttcaacattgagatttaagtcatttg |
520 |
Q |
| |
|
|||||| |||||||||| |||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
21361771 |
tccatcccctcttgcttctcttgcaatgacttcttgaatgaagacatcactttacaatcatcaaaatttaaaactttaacattgagatttaagtcatttg |
21361672 |
T |
|
| Q |
521 |
atccgtcctcaataatcatatgatccaactttggtttgtgtaaatcaatgccatca |
576 |
Q |
| |
|
||| |||||||||||||||||||| || |||||||||||||||||||||| ||||| |
|
|
| T |
21361671 |
atctgtcctcaataatcatatgatgcacctttggtttgtgtaaatcaatgtcatca |
21361616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 26 - 222
Target Start/End: Complemental strand, 27188374 - 27188178
Alignment:
| Q |
26 |
catcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccaccaat |
125 |
Q |
| |
|
||||||||||||||||||| | || |||||||||||||||| |||||||||||||| || |||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
27188374 |
catcacctccttcaatgtcattaatcctttcacaacaatcaagcaatttctcaagcttcttgtcatcatgaagtttctgaatttcctcaactccaccaat |
27188275 |
T |
|
| Q |
126 |
gtatttccttccaataaacacttttggtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatgcatt |
222 |
Q |
| |
|
||||||| || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
27188274 |
gtatttcttttcaataaacacttttggtaatcttcctttaccatagtacccttcaccaagtaactctttaagctcttccttgaatcctaaatgcatt |
27188178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 23 - 222
Target Start/End: Complemental strand, 27341632 - 27341433
Alignment:
| Q |
23 |
catcatcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccacc |
122 |
Q |
| |
|
|||||||||||||||||||||| | || |||||||||||||||| |||||||||||||| || |||||||| | |||||||||||||||||||||||| |
|
|
| T |
27341632 |
catcatcacctccttcaatgtcataaatcctttcacaacaatcaagcaatttctcaagcttcttgtcatcatgaagtttctgaatttcctcaactccacc |
27341533 |
T |
|
| Q |
123 |
aatgtatttccttccaataaacacttttggtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatgcatt |
222 |
Q |
| |
|
|||||||||| || |||||||||||||||| ||||| | ||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
27341532 |
aatgtatttcttttcaataaacacttttggcaatcctcttttaccatagtactcttcaccaagtaactctttaagctcttccttgaatcctaaatgcatt |
27341433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 31 - 222
Target Start/End: Complemental strand, 13545016 - 13544825
Alignment:
| Q |
31 |
cctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccaccaatgtatt |
130 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||||| |||||||||||||| || |||||||| | |||||||||||||||||||| ||||||||||| |
|
|
| T |
13545016 |
cctccttcaatgtcatcaatcctttcacaacaatcaagcaatttctcaagcttcttgtcatcatgaagtttctgaatttcctcaactctaccaatgtatt |
13544917 |
T |
|
| Q |
131 |
tccttccaataaacacttttggtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatgcatt |
222 |
Q |
| |
|
| || |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
13544916 |
ttttttcaataaacacttttggtaatcctcctttaccatagtacccttcaccaagtaactctttaagctcttccttgaatcctaaatacatt |
13544825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 26 - 218
Target Start/End: Original strand, 25455999 - 25456192
Alignment:
| Q |
26 |
catcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccaccaat |
125 |
Q |
| |
|
|||||||||||| |||| | |||| |||||||||||||||| |||||||||||||| || |||||||| | |||||||||||||||||||| |||||| |
|
|
| T |
25455999 |
catcacctcctttaatgccatcaatcctttcacaacaatcaagcaatttctcaagcttcttgtcatcatgaactttctgaatttcctcaactcaaccaat |
25456098 |
T |
|
| Q |
126 |
gtatttccttccaataaacacttttggtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttcc-ttgaatcctaaatg |
218 |
Q |
| |
|
||||||| || |||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||| ||||||||| ||||||| |||||| |
|
|
| T |
25456099 |
gtatttcttttcaataaacacttttggtaatcctcatttaccatagtacccttcaccaagtaactctttaagctcttcctttgaatcttaaatg |
25456192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 26 - 222
Target Start/End: Complemental strand, 38424565 - 38424369
Alignment:
| Q |
26 |
catcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccaccaat |
125 |
Q |
| |
|
||||||||||||||||||| |||| |||||||||||| || ||||||||||||| || ||| |||| | |||||||||||||| |||||||||||| |
|
|
| T |
38424565 |
catcacctccttcaatgtcatcaatcctttcacaacaaaaaagcgatttctcaagcttcttgtcaacatgaagtttctgaatttccttaactccaccaat |
38424466 |
T |
|
| Q |
126 |
gtatttccttccaataaacacttttggtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatgcatt |
222 |
Q |
| |
|
||||||| || ||| ||||||||||| |||||| ||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
38424465 |
gtatttcttttcaaaaaacacttttgataatcctcctttaccatagtacccttcaccaagtaactctttaagctattccttgaatcctaaatgcatt |
38424369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 196; Significance: 1e-106; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 26 - 325
Target Start/End: Original strand, 45765004 - 45765303
Alignment:
| Q |
26 |
catcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccaccaat |
125 |
Q |
| |
|
||||||||||||||||||| |||| ||||||||||||||| |||||||||||||| || |||||||| | ||||| |||||||||||||||| |||| |
|
|
| T |
45765004 |
catcacctccttcaatgtcatcaatcatttcacaacaatcaagcaatttctcaagcttcttgtcatcatgaagtttctaaatttcctcaactccaacaat |
45765103 |
T |
|
| Q |
126 |
gtatttccttccaataaacacttttggtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatgcattgac |
225 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| | ||||||||||| || |||||||| ||||||||| || |||||||| |||||||||||||||||| |
|
|
| T |
45765104 |
gtatttctttccaataaacacttttggtaatcctcatttaccatagtaccattcaccaaataactctttaagttcttccttaaatcctaaatgcattgac |
45765203 |
T |
|
| Q |
226 |
acatctctctcatcaacccttatgcctaatcctttcaaaaccatcctaactttgcaacaatcctcataagtttttctcaccatacgtagacttgtgaaat |
325 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
45765204 |
acatctctttcatcaacccttatgcctaatcctttcaaaatcatcctaactttgtaacaatcctcataagtttatctcaccatacgtaggcttgtgaaat |
45765303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 26 - 222
Target Start/End: Complemental strand, 21858075 - 21857878
Alignment:
| Q |
26 |
catcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctc-aactccaccaa |
124 |
Q |
| |
|
|||||||||||| |||||| | || |||||||||| ||||| |||| ||||||||| || |||||||| | |||||||||||| | ||||||||||| |
|
|
| T |
21858075 |
catcacctcctttaatgtcattaatcctttcacaactatcaagcaattcctcaagcttcttgtcatcatgaagtttctgaatttcttttaactccaccaa |
21857976 |
T |
|
| Q |
125 |
tgtatttccttccaataaacacttttggtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatgcatt |
222 |
Q |
| |
|
|||||||| || |||||||||||||||||||||| | |||||||| | |||||||||||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
21857975 |
tgtatttcttttcaataaacacttttggtaatcctcttttaccatggaacccttcaccaagtaactcttaaagctcttctttgaatcctaaatgcatt |
21857878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 26 - 222
Target Start/End: Complemental strand, 21913938 - 21913741
Alignment:
| Q |
26 |
catcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctc-aactccaccaa |
124 |
Q |
| |
|
|||||||||||| |||||| | || |||||||||| ||||| |||| ||||||||| || |||||||| | |||||||||||| | ||||||||||| |
|
|
| T |
21913938 |
catcacctcctttaatgtcattaatcctttcacaactatcaagcaattcctcaagcttcttgtcatcatgaagtttctgaatttcttttaactccaccaa |
21913839 |
T |
|
| Q |
125 |
tgtatttccttccaataaacacttttggtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatgcatt |
222 |
Q |
| |
|
|||||||| || |||||||||||||||||||||| | |||||||| | |||||||||||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
21913838 |
tgtatttcttttcaataaacacttttggtaatcctcttttaccatggaacccttcaccaagtaactcttaaagctcttctttgaatcctaaatgcatt |
21913741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 450 - 617
Target Start/End: Original strand, 45765320 - 45765487
Alignment:
| Q |
450 |
cttcttaaatgaagacaccactttacaatcatcaaaa-tttaaaacttcaacattgagatttaagtcatttgatccgtcctcaataatcatatgatccaa |
548 |
Q |
| |
|
|||||| |||||| ||| | ||||||||||| ||||| |||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
45765320 |
cttcttgaatgaaaacatccctttacaatcaccaaaaatttaaaacttcaac-ttcagatttaagtcatttgatccgttttcaataatcatatgatccaa |
45765418 |
T |
|
| Q |
549 |
ctttggtttgtgtaaatcaatgccatcatcattctccatgaagctagtctttgaaggatcaacatggcc |
617 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||||||||||| ||| |||| | ||||||| |||||| |
|
|
| T |
45765419 |
ctttggtttgtgtaaatcaatgtcgtcatcattctccatgaaattaggctttaacggatcaatatggcc |
45765487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 26 - 218
Target Start/End: Original strand, 35194510 - 35194705
Alignment:
| Q |
26 |
catcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccaccaat |
125 |
Q |
| |
|
|||||||||||||||| || |||| ||||||||||||| || |||||||||| ||| || |||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
35194510 |
catcacctccttcaatatcatcaatcctttcacaacaataaagcaatttctcaaacttcttgtcatcatgaagtttctgaatttcctcaactccaccaat |
35194609 |
T |
|
| Q |
126 |
gtatttccttccaataaacacttttggt----aatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatg |
218 |
Q |
| |
|
||||||| || ||| ||||||||||| | ||||| ||||||||||||| |||||||| |||||||| ||| |||| |||||||||||||||||| |
|
|
| T |
35194610 |
gtatttcttttcaa-aaacacttttgataatcaatcctcctttaccatagtacccttcacgaagtaactatttaagctattccttgaatcctaaatg |
35194705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 26 - 219
Target Start/End: Original strand, 12595032 - 12595227
Alignment:
| Q |
26 |
catcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccac---c |
122 |
Q |
| |
|
|||||||||||||||| || | || |||||||||||| ||| |||||||||||||| || ||||||| | ||||||||||||||||||||||| | |
|
|
| T |
12595032 |
catcacctccttcaatttcattaatcctttcacaacaa-caagcaatttctcaagcttcttgccatcatgaagtttctgaatttcctcaactccaccacc |
12595130 |
T |
|
| Q |
123 |
aatgtatttccttccaataaacacttttggtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatgc |
219 |
Q |
| |
|
|||||||||| || |||||||||| ||||||||||| | ||||||||||| ||||||||||||||||| ||| |||| || |||||||||||||||| |
|
|
| T |
12595131 |
aatgtatttcttttcaataaacacatttggtaatcctcatttaccatagtacccttcaccaagtaactatttaagcttttacttgaatcctaaatgc |
12595227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 194; Significance: 1e-105; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 26 - 323
Target Start/End: Original strand, 9665981 - 9666278
Alignment:
| Q |
26 |
catcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccaccaat |
125 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| |||||||||||||| || |||| ||| | ||| ||||||||||||||| || |||| |
|
|
| T |
9665981 |
catcacctccttcaatgtcgtcaatcctttcacaacaatcaagcaatttctcaagcttcttgtcattatgaagtttatgaatttcctcaactacaacaat |
9666080 |
T |
|
| Q |
126 |
gtatttccttccaataaacacttttggtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatgcattgac |
225 |
Q |
| |
|
||||||| |||||||||| |||||||||||||| |||||| |||||| || |||||||||||||||||| |||||||||||||||| || |||||||||| |
|
|
| T |
9666081 |
gtatttctttccaataaatacttttggtaatcctcctttatcatagtacctttcaccaagtaactctttaagctcttccttgaatcttatatgcattgac |
9666180 |
T |
|
| Q |
226 |
acatctctctcatcaacccttatgcctaatcctttcaaaaccatcctaactttgcaacaatcctcataagtttttctcaccatacgtagacttgtgaa |
323 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
9666181 |
acatctctctcaccaacccttatgcctaatcctttcaaaatcatcctaactttgcaacaatcctcataaggttttctcaccatacgtagtgttgtgaa |
9666278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 309 - 378
Target Start/End: Original strand, 9667037 - 9667106
Alignment:
| Q |
309 |
acgtagacttgtgaaatacaacactactttttccttcttctcataaggggcaatcttgaaattcacaaca |
378 |
Q |
| |
|
|||||| ||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
9667037 |
acgtaggcttgtaaaatacaacaccactttttccttcttctcataagaggcaatcttgaaattcacaaca |
9667106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 128; Significance: 9e-66; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 27 - 222
Target Start/End: Complemental strand, 22388799 - 22388604
Alignment:
| Q |
27 |
atcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccaccaatg |
126 |
Q |
| |
|
|||||||||||||||||| |||| |||||||||||||||| |||||||||||||| || |||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
22388799 |
atcacctccttcaatgtcatcaatcctttcacaacaatcaagcaatttctcaagcttcttgtcatcatgaagtttctgaatttcctcaactccaccaatg |
22388700 |
T |
|
| Q |
127 |
tatttccttccaataaacacttttggtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatgcatt |
222 |
Q |
| |
|
|||||| || || ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
22388699 |
tatttcttttcactaaacacttttggtaatcctcctctaccatagtacccttcaccaagtaactctttaaactcttccttgaatcctaaatgcatt |
22388604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 26 - 222
Target Start/End: Complemental strand, 32814684 - 32814488
Alignment:
| Q |
26 |
catcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccaccaat |
125 |
Q |
| |
|
||||||||||||||||||| |||| ||||||||||||||||| ||||||||||| || || |||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
32814684 |
catcacctccttcaatgtcatcaatcctttcacaacaatcaaacaatttctcaagtttcttgtcatcatgaaatttctgaatttcctcaactccaccaat |
32814585 |
T |
|
| Q |
126 |
gtatttccttccaataaacacttttggtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatgcatt |
222 |
Q |
| |
|
||||||| || |||||||||||||||||||||| |||||||| |||| |||||||| |||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
32814584 |
gtatttcttttcaataaacacttttggtaatcctcctttaccgtagtattcttcaccaggtaactctttaagctcttccttgaatcctaaatacatt |
32814488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 26 - 222
Target Start/End: Complemental strand, 44209550 - 44209354
Alignment:
| Q |
26 |
catcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccaccaat |
125 |
Q |
| |
|
||||||||||||||||||| |||| |||||||||||||||| |||||||||||||| || ||||||| | |||||||||||||||||||||||||| |
|
|
| T |
44209550 |
catcacctccttcaatgtcatcaatcctttcacaacaatcaagcaatttctcaagcttcttgccatcatgaagtttctgaatttcctcaactccaccaac |
44209451 |
T |
|
| Q |
126 |
gtatttccttccaataaacacttttggtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatgcatt |
222 |
Q |
| |
|
||||||| || |||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||| |||| ||||||||||||||||| |||| |
|
|
| T |
44209450 |
gtatttcttttcaataaacacttttggtaatcctcctttaccatagtactcttcaccaagtaactctttaagctattccttgaatcctaaatacatt |
44209354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 28 - 218
Target Start/End: Complemental strand, 43214932 - 43214742
Alignment:
| Q |
28 |
tcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccaccaatgt |
127 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||||||| |||||||||||||| || |||||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
43214932 |
tcacctccttcaatgtcctcaatcctttcacaacaatcaaacaatttctcaagcttcttgtcatcatgaagtttctgaatttcctcaactccaccaatgt |
43214833 |
T |
|
| Q |
128 |
atttccttccaataaacacttttggtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatg |
218 |
Q |
| |
|
||||| || ||||||||||||||||||||| || |||| ||||| |||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
43214832 |
atttctttttaataaacacttttggtaatcctccattacaatagtatccttcaccaagtaactctttaagcttttccttgaatcctaaatg |
43214742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 44209727 - 44209675
Alignment:
| Q |
26 |
catcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctca |
78 |
Q |
| |
|
||||||||||||||||||| |||| |||||||||||||||| ||||||||| |
|
|
| T |
44209727 |
catcacctccttcaatgtcatcaatcctttcacaacaatcaagcaatttctca |
44209675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 125; Significance: 5e-64; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 26 - 222
Target Start/End: Complemental strand, 30022853 - 30022657
Alignment:
| Q |
26 |
catcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccaccaat |
125 |
Q |
| |
|
||||||||||||||||||| | || |||||||||||||||| |||||||||||| || || |||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
30022853 |
catcacctccttcaatgtcattaatcctttcacaacaatcaagtaatttctcaagtttcttgtcatcatgaagtttctgaatttcctcaactccaccaat |
30022754 |
T |
|
| Q |
126 |
gtatttccttccaataaacacttttggtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatgcatt |
222 |
Q |
| |
|
||||||| || |||||| ||||||||||||||| ||||||||||||| || |||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
30022753 |
gtatttcatttcaataagcacttttggtaatcctcctttaccatagtaccattcaccaagtaactctttaaactcttccttgaatcctaaatgcatt |
30022657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 26 - 222
Target Start/End: Original strand, 21386876 - 21387072
Alignment:
| Q |
26 |
catcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccaccaat |
125 |
Q |
| |
|
||||||||||||||||| | | || ||||||||||||||| |||||||||||||| || |||||||| | ||||| ||||||||||||||||||||| |
|
|
| T |
21386876 |
catcacctccttcaatgccattaatcatttcacaacaatcaagcaatttctcaagcttcttgtcatcatgaagtttctaaatttcctcaactccaccaat |
21386975 |
T |
|
| Q |
126 |
gtatttccttccaataaacacttttggtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatgcatt |
222 |
Q |
| |
|
||||||| || |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
21386976 |
gtatttcttttcaataaacacttttggtaatcctcctttaccatagtttccttcaccaagtaactctttaagctcttccttgaatcataaatgcatt |
21387072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 26 - 215
Target Start/End: Complemental strand, 29644602 - 29644413
Alignment:
| Q |
26 |
catcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccaccaat |
125 |
Q |
| |
|
||||| ||||||||||||| |||| |||||||||||||||| |||||||||||||| || |||||||| | ||||||||||||||||||| || |||| |
|
|
| T |
29644602 |
catcatctccttcaatgtcatcaatcctttcacaacaatcaagcaatttctcaagcttcttgtcatcatgaagtttctgaatttcctcaacttcatcaat |
29644503 |
T |
|
| Q |
126 |
gtatttccttccaataaacacttttggtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaa |
215 |
Q |
| |
|
||||||| || ||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||| | || ||||||||||||||| |
|
|
| T |
29644502 |
gtatttcttttcaataaacaattttggtaatcctcctttaccatagtacccttcaccaagtaactctttaaactattccttgaatcctaa |
29644413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 28 - 222
Target Start/End: Original strand, 33696990 - 33697175
Alignment:
| Q |
28 |
tcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccaccaatgt |
127 |
Q |
| |
|
|||||| |||||||||| ||| ||||||||||||||||| |||||||||||||| || |||||||| | ||||| ||||||||||||||| |
|
|
| T |
33696990 |
tcacctacttcaatgtcatcactcctttcacaacaatcaaacaatttctcaagcttcttgtcatcatgaagtttct---------caactccaccaatgt |
33697080 |
T |
|
| Q |
128 |
atttccttccaataaacacttttggtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatgcatt |
222 |
Q |
| |
|
||||| || |||||||||||||| ||||| | ||||||| ||||| |||||||||||||| ||||| | |||||||||||||||||||| |||| |
|
|
| T |
33697081 |
atttcttttcaataaacactttttgtaattctcctttactatagtatccttcaccaagtaattctttaaactcttccttgaatcctaaatacatt |
33697175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 55 - 306
Target Start/End: Complemental strand, 2372992 - 2372744
Alignment:
| Q |
55 |
tcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccaccaatgtatttccttccaataaacacttttggta |
154 |
Q |
| |
|
|||||||| || || ||||||||||| ||| ||| ||||| | ||||| |||||||||||||||||||||||| ||| | |||| ||| || |||||| |
|
|
| T |
2372992 |
tcacaacattccaacaatttctcaagttttccatcttcatgaagtttctcaatttcctcaactccaccaatgtaattcttaccaacaaaaacccttggta |
2372893 |
T |
|
| Q |
155 |
atccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatgcattgacacatctctctcatcaacccttatgcctaa |
254 |
Q |
| |
|
|||| ||| ||||| | ||||| | | |||| | ||||| ||||||||||||||||||||||| ||||||||||||||||| || | ||||| |
|
|
| T |
2372892 |
atcctcctcccccata---caaatcacctaaaagctctcttagctcctccttgaatcctaaatgcattgatacatctctctcatcaactctcactcctaa |
2372796 |
T |
|
| Q |
255 |
tcctttcaaaaccatcctaactttgcaacaatcctcataagtttttctcacc |
306 |
Q |
| |
|
||| |||||| |||||| |||| ||||||||| |||||||| ||||||||| |
|
|
| T |
2372795 |
ccctctcaaaatcatccttacttggcaacaatcttcataagtctttctcacc |
2372744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 623 - 713
Target Start/End: Complemental strand, 2372487 - 2372397
Alignment:
| Q |
623 |
cattaacatcaaaagacaaacttcttaattgatttggtgattgaaaaggacttgtatcttcaagtccttccattagttcccatgtgttgat |
713 |
Q |
| |
|
|||| ||||||||||| || ||| | || ||||| || ||| |||||||||| |||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
2372487 |
cattgacatcaaaagaaaagcttttgaagtgattcggcgatcgaaaaggactaatatcttcaagaccttccattaattcccatgtgttgat |
2372397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 222
Target Start/End: Original strand, 42491215 - 42491283
Alignment:
| Q |
153 |
taatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatgcatt |
222 |
Q |
| |
|
|||||| ||||||||||||| |||||||||| ||||| ||| || |||||||||||||||||||||||| |
|
|
| T |
42491215 |
taatcctcctttaccatagtatccttcaccaactaact-tttaagttcttccttgaatcctaaatgcatt |
42491283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 117; Significance: 3e-59; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 26 - 222
Target Start/End: Original strand, 10317338 - 10317534
Alignment:
| Q |
26 |
catcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccaccaat |
125 |
Q |
| |
|
||||||||||||||||| | |||| |||||||||||||||| ||||||||||||||||| |||||||| | ||||||||||| ||||||||||||||| |
|
|
| T |
10317338 |
catcacctccttcaatgccatcaatcctttcacaacaatcaagcaatttctcaagctttttgtcatcatgaagtttctgaattttctcaactccaccaat |
10317437 |
T |
|
| Q |
126 |
gtatttccttccaataaacacttttggtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatgcatt |
222 |
Q |
| |
|
||| ||| || |||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
10317438 |
gtacttcttttcaataaacacttttattaatcctcctttaccatagtacccttcaccaagtaactctttaagctcttccttgaattttaaatgcatt |
10317534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 26 - 222
Target Start/End: Complemental strand, 14252325 - 14252129
Alignment:
| Q |
26 |
catcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccaccaat |
125 |
Q |
| |
|
||||||||||||||||||| |||| |||||||||| ||||| |||||||||||||| || |||||||| | ||| ||||||||||||||||||||||| |
|
|
| T |
14252325 |
catcacctccttcaatgtcatcaatcctttcacaacgatcaagcaatttctcaagcttcttgtcatcatgaagtttttgaatttcctcaactccaccaat |
14252226 |
T |
|
| Q |
126 |
gtatttccttccaataaacacttttggtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatgcatt |
222 |
Q |
| |
|
||||||| || |||||||||||||| ||||||| | ||||||||||| ||||||||||||||||||||| |||| ||| ||||||| |||||||||| |
|
|
| T |
14252225 |
gtatttcttttcaataaacactttttgtaatcctcatttaccatagtacccttcaccaagtaactctttaagctattctttgaatcttaaatgcatt |
14252129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 33 - 222
Target Start/End: Complemental strand, 9758742 - 9758553
Alignment:
| Q |
33 |
tccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccaccaatgtatttc |
132 |
Q |
| |
|
|||||||||||| |||| ||||||||| |||||| |||||||||||||| || |||||||| | ||||||||||| |||||||||||||| ||||||| |
|
|
| T |
9758742 |
tccttcaatgtcatcaatcctttcacaaaaatcaagcaatttctcaagcttcttgtcatcatgaagtttctgaattttctcaactccaccaacgtatttc |
9758643 |
T |
|
| Q |
133 |
cttccaataaacacttttggtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatgcatt |
222 |
Q |
| |
|
|| |||||||||||||||||||||| ||||||||||||| | |||| ||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
9758642 |
ttttcaataaacacttttggtaatcctcctttaccatagtactcttcgtcaagtaactctttaaactcttccttgaatcctaaatgcatt |
9758553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 26 - 222
Target Start/End: Complemental strand, 5607257 - 5607061
Alignment:
| Q |
26 |
catcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccaccaat |
125 |
Q |
| |
|
||||||| |||||||||| |||| |||||||||||||||| |||||||||||||| || | |||||| | |||||||||||||||||||||||||| |
|
|
| T |
5607257 |
catcaccgtcttcaatgtcatcaatcctttcacaacaatcaagcaatttctcaagcttcttgttatcatgaagtttctgaatttcctcaactccaccaac |
5607158 |
T |
|
| Q |
126 |
gtatttccttccaataaacacttttggtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatgcatt |
222 |
Q |
| |
|
||||| || |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| || |||| ||||||||||||||||||| |
|
|
| T |
5607157 |
ttatttattttcaataaacacttttggtaatcctcctttaccatagtatccttcaccaagtaactctttaagttctttcttgaatcctaaatgcatt |
5607061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 10315565 - 10315648
Alignment:
| Q |
26 |
catcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaattt |
109 |
Q |
| |
|
||||||||| ||||||| | |||| ||||||||||||||| |||||||||||||| || |||||||| | ||||||||||| |
|
|
| T |
10315565 |
catcacctctttcaatgccatcaatcatttcacaacaatcaagcaatttctcaagcttcttgtcatcatgaagtttctgaattt |
10315648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 10316293 - 10316376
Alignment:
| Q |
26 |
catcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaattt |
109 |
Q |
| |
|
||||||||||||||||| | |||| | ||||||| |||||| |||||||||||||| || |||||||| | ||||||||||| |
|
|
| T |
10316293 |
catcacctccttcaatgccatcaatccattcacaataatcaagcaatttctcaagcttcttgtcatcatgaagtttctgaattt |
10316376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 10316976 - 10317058
Alignment:
| Q |
27 |
atcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaattt |
109 |
Q |
| |
|
|||||||||||||||| | |||| | ||||||| |||||| |||||||||||||| || |||||||| | ||||||||||| |
|
|
| T |
10316976 |
atcacctccttcaatgccatcaatccattcacaataatcaagcaatttctcaagcttcttgtcatcatgaagtttctgaattt |
10317058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 10315929 - 10316012
Alignment:
| Q |
26 |
catcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaattt |
109 |
Q |
| |
|
|||||| |||||||||| | |||| | ||||||| |||||| |||||||||||||| || |||||||| | ||||||||||| |
|
|
| T |
10315929 |
catcacatccttcaatgccatcaatccattcacaataatcaagcaatttctcaagcttcttgtcatcatgaagtttctgaattt |
10316012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 10316618 - 10316701
Alignment:
| Q |
26 |
catcacctccttcaatgtcgtcaactctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaattt |
109 |
Q |
| |
|
||||||||||||||||| | |||| | |||||| |||||| |||||||||||||| || |||||||| | ||||||||||| |
|
|
| T |
10316618 |
catcacctccttcaatgccatcaatccattcacagtaatcaagcaatttctcaagcttcttgtcatcatgaagtttctgaattt |
10316701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0140 (Bit Score: 103; Significance: 7e-51; HSPs: 1)
Name: scaffold0140
Description:
Target: scaffold0140; HSP #1
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 52 - 222
Target Start/End: Original strand, 4892 - 5062
Alignment:
| Q |
52 |
ctttcacaacaatcaaataatttctcaagctttttatcatcatgtaatttctgaatttcctcaactccaccaatgtatttccttccaataaacacttttg |
151 |
Q |
| |
|
|||||||| ||||||| |||||||||||||| || |||||||| | |||||||||||||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
4892 |
ctttcacagcaatcaagcaatttctcaagcttcttgtcatcatgaagtttctgaatttcctcaactccaccaatgtatttcttttcaataaacacttttg |
4991 |
T |
|
| Q |
152 |
gtaatccacctttaccatagttcccttcaccaagtaactctttgagctcttccttgaatcctaaatgcatt |
222 |
Q |
| |
|
||||||| ||||||||||||| |||||||||||||||||| || ||||||||||||| |||||||||| |
|
|
| T |
4992 |
gtaatcctcctttaccatagtatgcttcaccaagtaactcttcaagttcttccttgaatcttaaatgcatt |
5062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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