View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21683_high_24 (Length: 336)
Name: NF21683_high_24
Description: NF21683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21683_high_24 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 223; Significance: 1e-123; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 15 - 309
Target Start/End: Complemental strand, 33804505 - 33804212
Alignment:
| Q |
15 |
atggacatcatcgggtacatctgtaaccttttcaataaatttatgcatccaaattaggatttggtctttgtgtggtatattaaatttaaccggtgttggc |
114 |
Q |
| |
|
|||| ||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||| |||||||||||||||| |
|
|
| T |
33804505 |
atggccatcaccgggtacatttgtaaccttttcaataaatttatgcatccaaattgggatttggtttttgtgtggtatgttaactttaaccggtgttggc |
33804406 |
T |
|
| Q |
115 |
ttgttcgggttttttggagttggcttaggaggagtaggtgacatgttgcttttccatgcactcttcctactcgtccctcttgatcttgtttgtgaacctt |
214 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
33804405 |
ttgttcgggttttt-ggagttggcttaggaggagtaggtgacatgttgctttttcgtgcactcttcctactcgtccctgttgatcttgtttgtgaacctt |
33804307 |
T |
|
| Q |
215 |
gtgtcccttgctcctgggagtcaacaatctcccatagcaaaggggaccaccttgtcgatcgaatgctttgcttatctttcttatgagctcttttg |
309 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||| |||||| |||| |
|
|
| T |
33804306 |
gtgtctcttgctcctgggagtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgttttgcttatctttcttaggagctcctttg |
33804212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 15 - 309
Target Start/End: Original strand, 45908317 - 45908610
Alignment:
| Q |
15 |
atggacatcatcgggtacatctgtaaccttttcaataaatttatgcatccaaattaggatttggtctttgtgtggtatattaaatttaaccggtgttggc |
114 |
Q |
| |
|
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||| |
|
|
| T |
45908317 |
atggccatcaccgggtacatctgtaaccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatattgactttaaccggtgttggc |
45908416 |
T |
|
| Q |
115 |
ttgttcgggttttttggagttggcttaggaggagtaggtgacatgttgcttttccatgcactcttcctactcgtccctcttgatcttgtttgtgaacctt |
214 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||| |||||||||| | |||||| | |
|
|
| T |
45908417 |
ttgtccgggttttttggagttggcttaggaagagtaggtgacatgttgctttttcgtgcactcttcctactcgtccctgttgatcttgtctatgaaccct |
45908516 |
T |
|
| Q |
215 |
gtgtcccttgctcctgggagtcaacaatctcccatagcaaaggggaccaccttgtcgatcgaatgctttgcttatctttcttatgagctcttttg |
309 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| | |||||||||||||||||||||||| |||| |
|
|
| T |
45908517 |
gtgtctcttgctcctgggagtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaa-gttttgcttatctttcttatgagctcctttg |
45908610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 15 - 309
Target Start/End: Complemental strand, 50517559 - 50517264
Alignment:
| Q |
15 |
atggacatcatcgggtacatctgtaaccttttcaataaatttatgcatccaaattaggatttggtctttgtgtggtatattaaatttaaccgg-tgttgg |
113 |
Q |
| |
|
|||| ||||| |||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| ||||||| | ||||| ||| |||||| |
|
|
| T |
50517559 |
atggccatcaccgggtacatctgtacccttttcaataaatttatgcattcaaattgggatttggtctttgtgtcgtatatttactttaatcgggtgttgg |
50517460 |
T |
|
| Q |
114 |
cttgttcgggttttttggagttggcttaggaggagtaggtgacatgttgcttttccatgcactcttcctactcgtccctcttgatcttgtttgtgaacct |
213 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
50517459 |
cttgttcgggttttttggagttggcttaggacgagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatcttgtctgtgaaccc |
50517360 |
T |
|
| Q |
214 |
tgtgtcccttgctcctgggagtcaacaatctcccatagcaaaggggaccaccttgtcgatcgaatgctttgcttatctttcttatgagctcttttg |
309 |
Q |
| |
|
|||| | |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
50517359 |
tgtggctcttgctcctgggagtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctcctttg |
50517264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 15 - 309
Target Start/End: Original strand, 44710566 - 44710841
Alignment:
| Q |
15 |
atggacatcatcgggtacatctgtaaccttttcaataaatttatgcatccaaattaggatttggtctttgtgtggtatattaaatttaaccggtgttggc |
114 |
Q |
| |
|
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
44710566 |
atggccatcaccgggtacatctgtaaccttttcaataaatttatgcatccaaattaggatttggtctttgtgtggtatattaactttaaccggtgttggc |
44710665 |
T |
|
| Q |
115 |
ttgttcgggttttttggagttggcttaggaggagtaggtgacatgttgcttttccatgcactcttcctactcgtccctcttgatcttgtttgtgaacctt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| |
|
|
| T |
44710666 |
ttgttcgggttttttggagttggcttaggaggagtaggtgacatgttgcttttccatgcactcttcctattcgtccctgttgatcttgtctgtgaacctt |
44710765 |
T |
|
| Q |
215 |
gtgtcccttgctcctgggagtcaacaatctcccatagcaaaggggaccaccttgtcgatcgaatgctttgcttatctttcttatgagctcttttg |
309 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
44710766 |
gtgtcccttgct-------------------ccatggcaaaggggaccaccttgtcgatcgaatgctttgcttatctttcttaggagctcctttg |
44710841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 39 - 296
Target Start/End: Original strand, 12865284 - 12865541
Alignment:
| Q |
39 |
aaccttttcaataaatttatgcatccaaattaggatttggtctttgtgtggtatattaaatttaaccggtgttggcttgttcgggttttttggagttggc |
138 |
Q |
| |
|
||||||| |||||||| ||||||||||||| |||||||||||||||||||||| | | ||||||| ||| |||||| ||||| ||||||||| ||||| |
|
|
| T |
12865284 |
aacctttctaataaattcatgcatccaaattgggatttggtctttgtgtggtatgtggactttaaccagtgctggcttcttcggattttttggaattggc |
12865383 |
T |
|
| Q |
139 |
ttaggaggagtaggtgacatgttgcttttccatgcactcttcctactcgtccctcttgatcttgtttgtgaaccttgtgtcccttgctcctgggagtcaa |
238 |
Q |
| |
|
|| |||||||||| |||||||| ||||| |||||||| || ||||| |||||| ||||| |||||||| |||| ||||| ||| || |||||||||| |
|
|
| T |
12865384 |
ataagaggagtaggagacatgtttctttttcatgcactttttctacttgtccctgttgattttgtttgtcaaccctgtgttttttgttcttgggagtcaa |
12865483 |
T |
|
| Q |
239 |
caatctcccatagcaaaggggaccaccttgtcgatcgaatgctttgcttatctttctt |
296 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
12865484 |
caatctcccatagcgaaggggaccaccttatcgatcgaatggtttgcttatctttctt |
12865541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 214; Significance: 1e-117; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 15 - 304
Target Start/End: Original strand, 20234091 - 20234380
Alignment:
| Q |
15 |
atggacatcatcgggtacatctgtaaccttttcaataaatttatgcatccaaattaggatttggtctttgtgtggtatattaaatttaaccggtgttggc |
114 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||| || | |||||||||||||||| |
|
|
| T |
20234091 |
atggccatcatcgggtacatctgtaaccctttcaataaatttatatatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttggc |
20234190 |
T |
|
| Q |
115 |
ttgttcgggttttttggagttggcttaggaggagtaggtgacatgttgcttttccatgcactcttcctactcgtccctcttgatcttgtttgtgaacctt |
214 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||| | |
|
|
| T |
20234191 |
ttgttcgggttttttggagttagcttaggaggagcaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatcttgtatgtgaaccct |
20234290 |
T |
|
| Q |
215 |
gtgtcccttgctcctgggagtcaacaatctcccatagcaaaggggaccaccttgtcgatcgaatgctttgcttatctttcttatgagctc |
304 |
Q |
| |
|
||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
20234291 |
gtgtctcttgctcctgtgagtcaacaatctcccatagcaaaggggaccgccttgtcgatcgaatgttttgcttatctttcttaggagctc |
20234380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 15 - 309
Target Start/End: Complemental strand, 25762908 - 25762615
Alignment:
| Q |
15 |
atggacatcatcgggtacatctgtaaccttttcaataaatttatgcatccaaattaggatttggtctttgtgtggtatattaaatttaaccggtgttggc |
114 |
Q |
| |
|
|||| ||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||| || | |||| ||||||||||| |
|
|
| T |
25762908 |
atggccatcaccgggtacatctgtaaccttttcaataaagttatgcatccaaattgggatttggtctttgtgttgtatgttgacttta-ccggtgttggc |
25762810 |
T |
|
| Q |
115 |
ttgttcgggttttttggagttggcttaggaggagtaggtgacatgttgcttttccatgcactcttcctactcgtccctcttgatcttgtttgtgaacctt |
214 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||| | |
|
|
| T |
25762809 |
ttgttcgagttttttggagttggcttaggaggagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatcttgtctgtgaaccct |
25762710 |
T |
|
| Q |
215 |
gtgtcccttgctcctgggagtcaacaatctcccatagcaaaggggaccaccttgtcgatcgaatgctttgcttatctttcttatgagctcttttg |
309 |
Q |
| |
|
|||| ||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
25762709 |
atgtctcttgctccttggagtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctcctttg |
25762615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 15 - 309
Target Start/End: Original strand, 23350923 - 23351217
Alignment:
| Q |
15 |
atggacatcatcgggtacatctgtaaccttttcaataaatttatgcatccaaattaggatttggtctttgtgtggtatattaaatttaaccggtgttggc |
114 |
Q |
| |
|
|||| ||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||| || | |||||||| ||||||| |
|
|
| T |
23350923 |
atggccatcaccaggtacatctgtaaccttttcaataaatttatgcatccaaattgagatttggtctttatgtgatatgttgactttaaccgatgttggc |
23351022 |
T |
|
| Q |
115 |
ttgttcgggttttttggagttggcttaggaggagtaggtgacatgttgcttttccatgcactcttcctactcgtccctcttgatcttgtttgtgaacctt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||| | |
|
|
| T |
23351023 |
ttgttcgggttttttggagttggcttaggaggagtaggtgacatgttgcttttccgtgcactcttcctactggtccctgttgatcttgtctgtgaaccct |
23351122 |
T |
|
| Q |
215 |
gtgtcccttgctcctgggagtcaacaatctcccatagcaaaggggaccaccttgtcgatcgaatgctttgcttatctttcttatgagctcttttg |
309 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
23351123 |
gtgtctcttgctcttgggagtcaacaatctcccatagtgaaggggaccgccttgtcgatcgaatgctttgcttatctttcttgggagctcctttg |
23351217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 15 - 309
Target Start/End: Original strand, 34828103 - 34828394
Alignment:
| Q |
15 |
atggacatcatcgggtacatctgtaaccttttcaataaatttatgcatccaaattaggatttggtctttgtgtggtatattaaatttaaccggtgttggc |
114 |
Q |
| |
|
|||| ||||| | |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| || ||||||| |||||||||| |
|
|
| T |
34828103 |
atggccatcaccaggtacatctgtaaccttttcaataaatttatgcatcaaaattgggatttggtctttgtgtggtatgttgaatttaatcggtgttggc |
34828202 |
T |
|
| Q |
115 |
ttgttcgggttttttggagttggcttaggaggagtaggtgacatgttgcttttccatgcactcttcctactcgtccctcttgatcttgtttgtgaacctt |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| | |||||| | |
|
|
| T |
34828203 |
ttgttcgggttttttggagttggcttaggaaaagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatcttgtctatgaaccct |
34828302 |
T |
|
| Q |
215 |
gtgtcccttgctcctgggagtcaacaatctcccatagcaaaggggaccaccttgtcgatcgaatgctttgcttatctttcttatgagctcttttg |
309 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||| |||||| |||| |
|
|
| T |
34828303 |
gtgtctcttgctcatgggagtcaacaatctcccatagcgaaggggaccgccttgtcgatcg---gctttgcttatctttcttaggagctcctttg |
34828394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 15 - 309
Target Start/End: Original strand, 16491664 - 16491958
Alignment:
| Q |
15 |
atggacatcatcgggtacatctgtaaccttttcaataaatttatgcatccaaattaggatttggtctttgtgtggtatattaaatttaaccggtgttggc |
114 |
Q |
| |
|
|||| ||||| |||||||||| |||||||||||||||| | ||||||||||||| |||||||||||||||||||||||| | |||||| ||||||| | |
|
|
| T |
16491664 |
atggccatcaccgggtacatccctaaccttttcaataaagtcatgcatccaaattgggatttggtctttgtgtggtatatagactttaacgggtgttgac |
16491763 |
T |
|
| Q |
115 |
ttgttcgggttttttggagttggcttaggaggagtaggtgacatgttgcttttccatgcactcttcctactcgtccctcttgatcttgtttgtgaacctt |
214 |
Q |
| |
|
|| ||||| ||||| ||| ||||||||||||||||| | |||||||||||||||| ||||||||| |||||||||||| ||||| |||| ||||||| | |
|
|
| T |
16491764 |
ttcttcggatttttgggaattggcttaggaggagtatgagacatgttgcttttccgtgcactctttctactcgtccctgttgattttgtcagtgaaccct |
16491863 |
T |
|
| Q |
215 |
gtgtcccttgctcctgggagtcaacaatctcccatagcaaaggggaccaccttgtcgatcgaatgctttgcttatctttcttatgagctcttttg |
309 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
16491864 |
gtgtctcttgctcctgggagtcaacaatctcccatagggaaggggaccgccttgtcgatcgaatgctttgcttatctttctttggagctcctttg |
16491958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 257
Target Start/End: Original strand, 31058672 - 31058796
Alignment:
| Q |
134 |
ttggcttaggaggagtaggtgacatgttgcttttccatgcactcttcctactcgtccctcttg-atcttgtttgtgaaccttgtgtcccttgctcctggg |
232 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||||| |||||| | ||||| |||||| ||| || || | |||||| | ||||| ||| ||||||| |
|
|
| T |
31058672 |
ttggcttaggaggattaggagacatgttgcttttccgtgcactttctctacttgtccctgttgaattttttatgtgaagcatgtgtttgttgatcctggg |
31058771 |
T |
|
| Q |
233 |
agtcaacaatctcccatagcaaagg |
257 |
Q |
| |
|
|||||||||||||||| ||| |||| |
|
|
| T |
31058772 |
agtcaacaatctcccagagcgaagg |
31058796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 31058603 - 31058667
Alignment:
| Q |
41 |
ccttttcaataaatttatgcatccaaattaggatttggtctttgtgtggtatattaaatttaacc |
105 |
Q |
| |
|
||||||||||||||| |||||||||| | |||||||||||||||||||||| || | ||||||| |
|
|
| T |
31058603 |
ccttttcaataaattcatgcatccaatatgggatttggtctttgtgtggtatgttgactttaacc |
31058667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 257
Target Start/End: Original strand, 31043446 - 31043569
Alignment:
| Q |
134 |
ttggcttaggaggagtaggtgacatgttgcttttccatgcactcttcctactcgtccctcttgatcttgtttgtgaaccttgtgtcccttgctcctggga |
233 |
Q |
| |
|
|||||||||||||| || |||||||||||||||| |||||| | ||||| |||||| |||| |||| |||||| | |||| ||| |||||||| |
|
|
| T |
31043446 |
ttggcttaggaggattataagacatgttgcttttccgtgcactttctctacttgtccctgttgaatttgtatgtgaagcacgtgtttgttgatcctggga |
31043545 |
T |
|
| Q |
234 |
gtcaacaatctcccatagcaaagg |
257 |
Q |
| |
|
||||||||||||| | |||||||| |
|
|
| T |
31043546 |
gtcaacaatctcctagagcaaagg |
31043569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 31043377 - 31043428
Alignment:
| Q |
41 |
ccttttcaataaatttatgcatccaaattaggatttggtctttgtgtggtat |
92 |
Q |
| |
|
||||||||||||||| |||||||||| | ||||||| |||||||||||||| |
|
|
| T |
31043377 |
ccttttcaataaattcatgcatccaatgtgggatttgttctttgtgtggtat |
31043428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 21 - 309
Target Start/End: Complemental strand, 30214663 - 30214375
Alignment:
| Q |
21 |
atcatcgggtacatctgtaaccttttcaataaatttatgcatccaaattaggatttggtctttgtgtggtatattaaatttaaccggtgttggcttgttc |
120 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
30214663 |
atcaccgggtacatctgtaaccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatattgactttaaccggtgttggcttgttg |
30214564 |
T |
|
| Q |
121 |
gggttttttggagttggcttaggaggagtaggtgacatgttgcttttccatgcactcttcctactcgtccctcttgatcttgtttgtgaaccttgtgtcc |
220 |
Q |
| |
|
|||||||||||||||| |||||||||||||| ||||||||||||||| | ||||||||| ||||||||||| |||||||||| |||||||| |||||| |
|
|
| T |
30214563 |
gggttttttggagttgacttaggaggagtagatgacatgttgctttttcgtgcactctttgtactcgtccctgttgatcttgtctgtgaaccatgtgtct |
30214464 |
T |
|
| Q |
221 |
cttgctcctgggagtcaacaatctcccatagcaaaggggaccaccttgtcgatcgaatgctttgcttatctttcttatgagctcttttg |
309 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
30214463 |
cttgctcctgggagtcaacaatctcccatagagaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctcatttg |
30214375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 140 - 304
Target Start/End: Original strand, 17310076 - 17310240
Alignment:
| Q |
140 |
taggaggagtaggtgacatgttgcttttccatgcactcttcctactcgtccctcttgatcttgtttgtgaaccttgtgtcccttgctcctgggagtcaac |
239 |
Q |
| |
|
||||||||||| |||||||||||||||||| |||||||||||||||||||||| || ||||||| |||||||| |||||| ||||||||||||||||||| |
|
|
| T |
17310076 |
taggaggagtacgtgacatgttgcttttccgtgcactcttcctactcgtccctgtttatcttgtatgtgaaccctgtgtctcttgctcctgggagtcaac |
17310175 |
T |
|
| Q |
240 |
aatctcccatagcaaaggggaccaccttgtcgatcgaatgctttgcttatctttcttatgagctc |
304 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
17310176 |
aatctcccatagcaaaggggaccgccttgtcgatcgaatgctttgcttatctttcttaggagctc |
17310240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 29810935 - 29810858
Alignment:
| Q |
15 |
atggacatcatcgggtacatctgtaaccttttcaataaatttatgcatccaaattaggatttggtctttgtgtggtat |
92 |
Q |
| |
|
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||| |
|
|
| T |
29810935 |
atggccatcaccgggtacatctgtaaccttttcaataaatttatgcatccaaattggaatttggtctttgtgtagtat |
29810858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 246
Target Start/End: Complemental strand, 10926769 - 10926677
Alignment:
| Q |
154 |
gacatgttgcttttccatgcactcttcctactcgtccctcttgatcttgtttgtgaaccttgtgtcccttgctcctgggagtcaacaatctcc |
246 |
Q |
| |
|
|||||||||||||||| |||||| || ||||| |||| | |||| |||| |||||| | |||||| ||| || || ||||||||||||||| |
|
|
| T |
10926769 |
gacatgttgcttttccgtgcactttttctacttgtccttgttgaatttgtatgtgaagcatgtgtctgttgatcttgagagtcaacaatctcc |
10926677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 207; Significance: 1e-113; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 15 - 309
Target Start/End: Complemental strand, 48095868 - 48095574
Alignment:
| Q |
15 |
atggacatcatcgggtacatctgtaaccttttcaataaatttatgcatccaaattaggatttggtctttgtgtggtatattaaatttaaccggtgttggc |
114 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||| |
|
|
| T |
48095868 |
atggccatcatcgggtacatctgtaaccttttcaataaacttatgcatccaaattaggatttggtctttgtgtgatatattgactttaaccggtgttggc |
48095769 |
T |
|
| Q |
115 |
ttgttcgggttttttggagttggcttaggaggagtaggtgacatgttgcttttccatgcactcttcctactcgtccctcttgatcttgtttgtgaacctt |
214 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| |||||||| | |
|
|
| T |
48095768 |
ttgttagggttttttggagttggcttaggaggagtaggtgacatgttgcttttccgtgcactcttcttactcgtcccagttgatcttgtctgtgaaccct |
48095669 |
T |
|
| Q |
215 |
gtgtcccttgctcctgggagtcaacaatctcccatagcaaaggggaccaccttgtcgatcgaatgctttgcttatctttcttatgagctcttttg |
309 |
Q |
| |
|
||||| ||||||||||||| |||||||||| ||||||| ||||||||| ||| |||||||||||| ||||||||||||||| | |||||| |||| |
|
|
| T |
48095668 |
gtgtctcttgctcctgggattcaacaatcttccatagcgaaggggaccgcctagtcgatcgaatgttttgcttatctttctcaggagctcctttg |
48095574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 15 - 309
Target Start/End: Original strand, 52969920 - 52970214
Alignment:
| Q |
15 |
atggacatcatcgggtacatctgtaaccttttcaataaatttatgcatccaaattaggatttggtctttgtgtggtatattaaatttaaccggtgttggc |
114 |
Q |
| |
|
|||| ||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || | ||||||||||||| || |
|
|
| T |
52969920 |
atggccatcaccaggtacatctgtaaccttttcaataaatttatgcatccaaattgggatttggtctttgtgtggtatgttgactttaaccggtgttagc |
52970019 |
T |
|
| Q |
115 |
ttgttcgggttttttggagttggcttaggaggagtaggtgacatgttgcttttccatgcactcttcctactcgtccctcttgatcttgtttgtgaacctt |
214 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||| | |
|
|
| T |
52970020 |
ttgttcgggttttttggagttgacttagtaggagtaggtgacatgttgcttttctgtgcactcttcctactcgtccctgttgatcttgtctgtgaaccat |
52970119 |
T |
|
| Q |
215 |
gtgtcccttgctcctgggagtcaacaatctcccatagcaaaggggaccaccttgtcgatcgaatgctttgcttatctttcttatgagctcttttg |
309 |
Q |
| |
|
||||| ||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||| |||||| |||| |
|
|
| T |
52970120 |
gtgtctctttctcatgggagtcaacaatctcccatagcgaaggggaccgccttgtcgatcgaatgttttgcttatctttcttaggagctcatttg |
52970214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 57 - 309
Target Start/End: Original strand, 6159989 - 6160241
Alignment:
| Q |
57 |
atgcatccaaattaggatttggtctttgtgtggtatattaaatttaaccggtgttggcttgttcgggttttttggagttggcttaggaggagtaggtgac |
156 |
Q |
| |
|
||||||| ||||| ||||||| |||||||||||||| | | |||||| ||||||||| | ||||| ||||||||||||||||||||||||||||| ||| |
|
|
| T |
6159989 |
atgcatcaaaattgggatttgatctttgtgtggtatgtcgactttaacgggtgttggcatcttcggattttttggagttggcttaggaggagtaggagac |
6160088 |
T |
|
| Q |
157 |
atgttgcttttccatgcactcttcctactcgtccctcttgatcttgtttgtgaaccttgtgtcccttgctcctgggagtcaacaatctcccatagcaaag |
256 |
Q |
| |
|
||||||||||||| ||||||||| |||||||||||| ||||| |||| |||||||| |||||| |||||||||| |||||||||||||||||||| ||| |
|
|
| T |
6160089 |
atgttgcttttccgtgcactctttctactcgtccctgttgattttgtctgtgaaccctgtgtctcttgctcctgtgagtcaacaatctcccatagggaag |
6160188 |
T |
|
| Q |
257 |
gggaccaccttgtcgatcgaatgctttgcttatctttcttatgagctcttttg |
309 |
Q |
| |
|
|||| | |||||||||| |||||||||||||||||||||| |||||| |||| |
|
|
| T |
6160189 |
gggatcgccttgtcgatagaatgctttgcttatctttctttggagctcctttg |
6160241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 21 - 137
Target Start/End: Original strand, 26755850 - 26755966
Alignment:
| Q |
21 |
atcatcgggtacatctgtaaccttttcaataaatttatgcatccaaattaggatttggtctttgtgtggtatattaaatttaaccggtgttggcttgttc |
120 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||| | | |||||| ||||||||||| ||| |
|
|
| T |
26755850 |
atcaccgggtacatctgtaaccttttcaataaagtattgcatccaaattgggatttggtctttgtgtggtatgtggactttaacgggtgttggcttcttc |
26755949 |
T |
|
| Q |
121 |
gggttttttggagttgg |
137 |
Q |
| |
|
|| ||||||||| |||| |
|
|
| T |
26755950 |
ggattttttggaattgg |
26755966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 6157447 - 6157485
Alignment:
| Q |
15 |
atggacatcatcgggtacatctgtaaccttttcaataaa |
53 |
Q |
| |
|
|||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
6157447 |
atggccatcaccgggtacatctgtaaccttttcaataaa |
6157485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 15 - 309
Target Start/End: Complemental strand, 19219802 - 19219508
Alignment:
| Q |
15 |
atggacatcatcgggtacatctgtaaccttttcaataaatttatgcatccaaattaggatttggtctttgtgtggtatattaaatttaaccggtgttggc |
114 |
Q |
| |
|
|||| ||||| || |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| || | ||||| |||||||||| |
|
|
| T |
19219802 |
atggccatcaccgagtacatctataaccttttcaataaatttatgcatccaaattgaactttggtctttgtgtggtatgttgactttaaacggtgttggc |
19219703 |
T |
|
| Q |
115 |
ttgttcgggttttttggagttggcttaggaggagtaggtgacatgttgcttttccatgcactcttcctactcgtccctcttgatcttgtttgtgaacctt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
19219702 |
ttgttcgggttttttggagttggcttaggagaagtaggtgacatgttgcttttccgtgcactcttcctactcgtccctgttgatcttgtttgtgaacctt |
19219603 |
T |
|
| Q |
215 |
gtgtcccttgctcctgggagtcaacaatctcccatagcaaaggggaccaccttgtcgatcgaatgctttgcttatctttcttatgagctcttttg |
309 |
Q |
| |
|
||||| ||||||| |||||||||||||||| ||||||| || |||||| |||||||||||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
19219602 |
gtgtctcttgctcttgggagtcaacaatcttccatagcgaaagggacctccttgtcgatcgaatgctttgcttatctttcttaggagctcctttg |
19219508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 50 - 312
Target Start/End: Original strand, 41254943 - 41255205
Alignment:
| Q |
50 |
taaatttatgcatccaaattaggatttggtctttgtgtggtatattaaatttaaccggtgttggcttgttcgggttttttggagttggcttaggaggagt |
149 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
41254943 |
taaatttatgcatccaaattgggatttggtctttgtgtggtatattgactttaaccggtgttggcttgttcatgttttttggagttggcttaggaggagt |
41255042 |
T |
|
| Q |
150 |
aggtgacatgttgcttttccatgcactcttcctactcgtccctcttgatcttgtttgtgaaccttgtgtcccttgctcctgggagtcaacaatctcccat |
249 |
Q |
| |
|
|| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||| |||||||||||||||||||| |
|
|
| T |
41255043 |
agttgacatgttgcttttccgtgcactcttcctactcgtccctgttgatcttgtttgtgaaccctatgtctcttgctcatgggagtcaacaatctcccaa |
41255142 |
T |
|
| Q |
250 |
agcaaaggggaccaccttgtcgatcgaatgctttgcttatctttcttatgagctcttttgatg |
312 |
Q |
| |
|
||| |||||||| |||||||||||||||||||| ||||||||||||| |||||| ||||||| |
|
|
| T |
41255143 |
agcgaaggggactgccttgtcgatcgaatgctttacttatctttcttaggagctcctttgatg |
41255205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 20 - 295
Target Start/End: Complemental strand, 15893170 - 15892895
Alignment:
| Q |
20 |
catcatcgggtacatctgtaaccttttcaataaatttatgcatccaaattaggatttggtctttgtgtggtatattaaatttaaccggtgttggcttgtt |
119 |
Q |
| |
|
||||| ||||||||||||||||||||| |||||| | |||||| |||||| |||||||||||||||||||||| | | |||||| |||||| |||| || |
|
|
| T |
15893170 |
catcaccgggtacatctgtaaccttttgaataaagtcatgcattcaaattgggatttggtctttgtgtggtatgtggactttaacaggtgtttgcttctt |
15893071 |
T |
|
| Q |
120 |
cgggttttttggagttggcttaggaggagtaggtgacatgttgcttttccatgcactcttcctactcgtccctcttgatcttgtttgtgaaccttgtgtc |
219 |
Q |
| |
|
||| ||||||||| |||||||||||| |||||| |||||||||||||||| ||||||||| ||| |||||| | ||||| ||| |||||||| |||||| |
|
|
| T |
15893070 |
cggattttttggaattggcttaggagaagtaggagacatgttgcttttccgtgcactctttctaatcgtccatgttgattttgactgtgaaccctgtgtc |
15892971 |
T |
|
| Q |
220 |
ccttgctcctgggagtcaacaatctcccatagcaaaggggaccaccttgtcgatcgaatgctttgcttatctttct |
295 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||| || ||||||||||||||||||||||||||| |||| |
|
|
| T |
15892970 |
tcttgctcctgggagtcgacaatctcccataggggagggtcccgccttgtcgatcgaatgctttgcttatcattct |
15892895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 169
Target Start/End: Complemental strand, 44712060 - 44711934
Alignment:
| Q |
40 |
accttttcaataaatttatgcatccaaattaggatttggtctttgtgtggtatattaaatttaaccggtgttggcttgttcgggttttttggagttggct |
139 |
Q |
| |
|
|||||||||||||| | ||||||||||||| | |||||||||||||||||||| | | |||||||| ||| ||| || ||||| ||| |||||| |
|
|
| T |
44712060 |
accttttcaataaagtcatgcatccaaattggaatttggtctttgtgtggtatgtcgactttaaccgaaattg---agttaggatttttgggatttggct |
44711964 |
T |
|
| Q |
140 |
taggaggagtaggtgacatgttgcttttcc |
169 |
Q |
| |
|
||| |||| |||| |||||||||||||||| |
|
|
| T |
44711963 |
tagaaggattaggagacatgttgcttttcc |
44711934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 41254743 - 41254785
Alignment:
| Q |
15 |
atggacatcatcgggtacatctgtaaccttttcaataaattta |
57 |
Q |
| |
|
|||| ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
41254743 |
atggccatcaccgggtacatctgtaaccttttcaataaattta |
41254785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 15 - 309
Target Start/End: Complemental strand, 23255928 - 23255634
Alignment:
| Q |
15 |
atggacatcatcgggtacatctgtaaccttttcaataaatttatgcatccaaattaggatttggtctttgtgtggtatattaaatttaaccggtgttggc |
114 |
Q |
| |
|
|||| ||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||| || | |||||||||||||||| |
|
|
| T |
23255928 |
atggccatcaccgggtacatctgtaaccttttcaataaatttaggcatccaaatcgggatttggtctttgtgcggtatgttgactttaaccggtgttggc |
23255829 |
T |
|
| Q |
115 |
ttgttcgggttttttggagttggcttaggaggagtaggtgacatgttgcttttccatgcactcttcctactcgtccctcttgatcttgtttgtgaacctt |
214 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||| |||||||| | |
|
|
| T |
23255828 |
ttgttcggattttttggagttggcttaggaggagtaggtgacatgttgctttttcgtgcactcttcctactcgtccctgttgatcttgtctgtgaaccct |
23255729 |
T |
|
| Q |
215 |
gtgtcccttgctcctgggagtcaacaatctcccatagcaaaggggaccaccttgtcgatcgaatgctttgcttatctttcttatgagctcttttg |
309 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||||||| || ||||| ||||||||||||||| |||||||||||||||||| |||||| |||| |
|
|
| T |
23255728 |
gtgtctcttgctcttgggagtcaacaatctcccatagcgaaagggactgccttgtcgatcgaattctttgcttatctttcttaggagctcctttg |
23255634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 27 - 312
Target Start/End: Complemental strand, 757123 - 756838
Alignment:
| Q |
27 |
gggtacatctgtaaccttttcaataaatttatgcatccaaattaggatttggtctttgtgtggtatattaaatttaaccggtgttggcttgttcgggttt |
126 |
Q |
| |
|
||||| ||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||| | | |||||| ||||||||| | || || ||| |
|
|
| T |
757123 |
gggtagatctgtaaccttttcaataaagtcatgcatccaaattgggatttggtctttgtgtggtatgtcgactttaacgggtgttggcatctttggattt |
757024 |
T |
|
| Q |
127 |
tttggagttggcttaggaggagtaggtgacatgttgcttttccatgcactcttcctactcgtccctcttgatcttgtttgtgaaccttgtgtcccttgct |
226 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| ||||| ||||||||| |||||||||| | || || |||| |||||||| |||||| |||||| |
|
|
| T |
757023 |
tttggagttggcttaggaggagtaggagacatgttgtttttctgtgcactctttctactcgtccatgttaatattgtatgtgaaccatgtgtctcttgct |
756924 |
T |
|
| Q |
227 |
cctgggagtcaacaatctcccatagcaaaggggaccaccttgtcgatcgaatgctttgcttatctttcttatgagctcttttgatg |
312 |
Q |
| |
|
||||||||||||||||||| |||||| ||| |||| |||||||||||||||| ||||||||||||||||| |||||| ||||||| |
|
|
| T |
756923 |
cctgggagtcaacaatctctcatagcgaagaagaccgccttgtcgatcgaatgatttgcttatctttcttaggagctcctttgatg |
756838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 279
Target Start/End: Complemental strand, 16667313 - 16667076
Alignment:
| Q |
39 |
aaccttttcaataaatttatgcatccaaattaggatttggtctttgtgtggtatattaaatttaaccggtgttggcttgttcgggttttttggagttggc |
138 |
Q |
| |
|
||||||||||||||||| |||||||||| | |||||||||||||||||||||||| | ||||||||| ||||| || || ||||| ||| ||||| |
|
|
| T |
16667313 |
aaccttttcaataaattgatgcatccaatgtgggatttggtctttgtgtggtatatggactttaaccggaattggc---ttaggatttttcggaattggc |
16667217 |
T |
|
| Q |
139 |
ttaggaggagtaggtgacatgttgcttttccatgcactcttcctactcgtccctcttgatcttgtttgtgaaccttgtgtcccttgctcctgggagtcaa |
238 |
Q |
| |
|
|||||| || |||| |||||||||||||||| ||||||||| ||||| || | | ||| ||||||||||| | |||||| ||| ||||| || | || |
|
|
| T |
16667216 |
ttaggaagattaggagacatgttgcttttccgtgcactctttctacttgttcatgctgaatttgtttgtgaagcatgtgtctgttgttcctgtgaataaa |
16667117 |
T |
|
| Q |
239 |
caatctcccatagcaaaggggaccaccttgtcgatcgaatg |
279 |
Q |
| |
|
|||||||| | ||| |||| || | | ||||||| |||||| |
|
|
| T |
16667116 |
caatctcctagagcgaaggcgatccctttgtcgaccgaatg |
16667076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 134 - 246
Target Start/End: Original strand, 26674764 - 26674876
Alignment:
| Q |
134 |
ttggcttaggaggagtaggtgacatgttgcttttccatgcactcttcctactcgtccctcttgatcttgtttgtgaaccttgtgtcccttgctcctggga |
233 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||||| | |||| || ||||| |||||| |||| ||||||||||| | |||||| ||| |||| ||| |
|
|
| T |
26674764 |
ttggcttaggaggattaggagacatgttgcttttccgtacactttttctacttgtccctattgaatttgtttgtgaagcatgtgtctgttgatcctagga |
26674863 |
T |
|
| Q |
234 |
gtcaacaatctcc |
246 |
Q |
| |
|
||||||||||||| |
|
|
| T |
26674864 |
gtcaacaatctcc |
26674876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 26674697 - 26674746
Alignment:
| Q |
43 |
ttttcaataaatttatgcatccaaattaggatttggtctttgtgtggtat |
92 |
Q |
| |
|
||||||||| ||| |||||||||| |||||||||||||||||||||||| |
|
|
| T |
26674697 |
ttttcaatagattcatgcatccaatgtaggatttggtctttgtgtggtat |
26674746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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