View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21684_high_8 (Length: 354)

Name: NF21684_high_8
Description: NF21684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21684_high_8
NF21684_high_8
[»] scaffold0337 (2 HSPs)
scaffold0337 (1-88)||(10854-10941)
scaffold0337 (294-353)||(10592-10651)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-88)||(109560-109647)
scaffold0026 (294-353)||(109803-109862)
[»] scaffold0012 (2 HSPs)
scaffold0012 (1-88)||(224175-224262)
scaffold0012 (294-353)||(223875-223934)
[»] chr7 (81 HSPs)
chr7 (1-88)||(14420746-14420833)
chr7 (1-88)||(18871256-18871343)
chr7 (1-85)||(15166209-15166293)
chr7 (1-88)||(10897929-10898016)
chr7 (9-88)||(18606305-18606384)
chr7 (2-88)||(834078-834164)
chr7 (2-88)||(1199258-1199344)
chr7 (1-88)||(146459-146546)
chr7 (1-88)||(11660241-11660328)
chr7 (1-88)||(16004963-16005050)
chr7 (1-88)||(41283604-41283691)
chr7 (2-88)||(838166-838252)
chr7 (2-88)||(1203346-1203432)
chr7 (2-88)||(13891590-13891676)
chr7 (2-88)||(16110008-16110094)
chr7 (2-85)||(11302267-11302350)
chr7 (1-88)||(10607353-10607440)
chr7 (2-88)||(13891973-13892059)
chr7 (1-88)||(16582380-16582467)
chr7 (2-88)||(39721155-39721242)
chr7 (2-88)||(39268346-39268432)
chr7 (292-353)||(18606588-18606649)
chr7 (292-353)||(18871547-18871608)
chr7 (1-88)||(7520248-7520336)
chr7 (294-353)||(11660569-11660628)
chr7 (294-353)||(13255217-13255276)
chr7 (2-88)||(15083185-15083272)
chr7 (2-88)||(31685-31771)
chr7 (2-88)||(72404-72490)
chr7 (2-88)||(76513-76599)
chr7 (2-88)||(9752540-9752626)
chr7 (2-88)||(12706155-12706241)
chr7 (2-88)||(12713500-12713586)
chr7 (2-88)||(12722158-12722244)
chr7 (2-88)||(16908542-16908628)
chr7 (2-88)||(18277954-18278040)
chr7 (2-88)||(18281918-18282004)
chr7 (2-88)||(18424195-18424281)
chr7 (292-353)||(23666309-23666370)
chr7 (292-353)||(29795413-29795474)
chr7 (292-353)||(29799232-29799293)
chr7 (294-353)||(14420989-14421048)
chr7 (2-88)||(26291116-26291203)
chr7 (9-88)||(45171533-45171612)
chr7 (2-88)||(2531365-2531450)
chr7 (2-88)||(2833514-2833600)
chr7 (2-88)||(12717247-12717333)
chr7 (292-350)||(14565338-14565396)
chr7 (297-353)||(16109740-16109796)
chr7 (297-353)||(29003578-29003634)
chr7 (297-353)||(34956892-34956948)
chr7 (297-353)||(48742929-48742985)
chr7 (294-353)||(146752-146811)
chr7 (294-353)||(10897664-10897723)
chr7 (294-353)||(11302465-11302524)
chr7 (33-88)||(20486733-20486788)
chr7 (10-88)||(15213016-15213094)
chr7 (295-353)||(16572857-16572915)
chr7 (295-353)||(16592747-16592805)
chr7 (297-353)||(833764-833820)
chr7 (297-353)||(1198944-1199000)
chr7 (32-88)||(25928404-25928460)
chr7 (294-353)||(15166408-15166467)
chr7 (23-88)||(1860054-1860119)
chr7 (296-353)||(13850343-13850400)
chr7 (304-353)||(16007681-16007730)
chr7 (297-353)||(837793-837849)
chr7 (297-353)||(1202973-1203029)
chr7 (32-88)||(13919445-13919501)
chr7 (2-68)||(9752644-9752710)
chr7 (294-354)||(35365639-35365699)
chr7 (295-354)||(4992853-4992912)
chr7 (295-354)||(16005682-16005741)
chr7 (294-354)||(8775664-8775724)
chr7 (294-354)||(21744004-21744064)
chr7 (294-353)||(14189721-14189780)
chr7 (294-353)||(14192476-14192535)
chr7 (42-88)||(16185524-16185570)
chr7 (32-68)||(9752728-9752764)
chr7 (294-354)||(13396180-13396240)
chr7 (32-68)||(39268450-39268486)
[»] chr5 (46 HSPs)
chr5 (1-88)||(28372114-28372201)
chr5 (1-88)||(37600041-37600128)
chr5 (1-88)||(22338971-22339058)
chr5 (1-88)||(38146451-38146538)
chr5 (1-86)||(22335441-22335526)
chr5 (1-88)||(19510421-19510508)
chr5 (1-88)||(33473964-33474051)
chr5 (4-88)||(23113435-23113519)
chr5 (4-88)||(41878684-41878768)
chr5 (1-88)||(22120624-22120711)
chr5 (2-88)||(15238150-15238236)
chr5 (292-353)||(23113170-23113231)
chr5 (292-353)||(38146186-38146247)
chr5 (292-353)||(41878419-41878480)
chr5 (9-88)||(18354764-18354843)
chr5 (2-85)||(24768598-24768681)
chr5 (2-88)||(19474205-19474291)
chr5 (2-88)||(20294474-20294560)
chr5 (292-353)||(9775101-9775162)
chr5 (294-353)||(19510664-19510723)
chr5 (294-353)||(22469508-22469567)
chr5 (2-88)||(10751777-10751863)
chr5 (10-88)||(20912285-20912363)
chr5 (2-88)||(40727432-40727517)
chr5 (15-88)||(11219528-11219601)
chr5 (297-353)||(10816060-10816116)
chr5 (297-353)||(23538059-23538115)
chr5 (294-353)||(22358467-22358526)
chr5 (294-353)||(22749363-22749422)
chr5 (294-353)||(24277913-24277972)
chr5 (294-353)||(24384241-24384300)
chr5 (294-353)||(42959717-42959776)
chr5 (295-353)||(22335793-22335851)
chr5 (295-353)||(22339331-22339389)
chr5 (294-352)||(37599777-37599835)
chr5 (15-88)||(11224114-11224187)
chr5 (15-88)||(11227936-11228009)
chr5 (2-66)||(22108503-22108567)
chr5 (15-88)||(11226130-11226203)
chr5 (15-88)||(11229926-11229999)
chr5 (33-88)||(22749152-22749207)
chr5 (10-88)||(36459516-36459594)
chr5 (295-354)||(29325940-29325999)
chr5 (294-354)||(43120581-43120641)
chr5 (294-354)||(43124114-43124174)
chr5 (294-354)||(27870078-27870138)
[»] chr4 (64 HSPs)
chr4 (1-88)||(15533178-15533265)
chr4 (1-88)||(18211563-18211650)
chr4 (1-88)||(24048417-24048504)
chr4 (1-88)||(36036911-36036998)
chr4 (2-88)||(30145743-30145829)
chr4 (1-88)||(28384810-28384897)
chr4 (4-88)||(49549115-49549200)
chr4 (2-88)||(17052478-17052564)
chr4 (2-88)||(22634959-22635045)
chr4 (9-88)||(12422910-12422989)
chr4 (2-88)||(20158480-20158566)
chr4 (2-88)||(20163931-20164017)
chr4 (294-353)||(15989484-15989543)
chr4 (294-353)||(18211877-18211936)
chr4 (294-353)||(24048117-24048176)
chr4 (2-88)||(4562806-4562892)
chr4 (2-88)||(5758488-5758574)
chr4 (2-88)||(9555029-9555115)
chr4 (2-88)||(13813865-13813951)
chr4 (2-88)||(13818353-13818439)
chr4 (2-88)||(14759024-14759110)
chr4 (2-88)||(14955792-14955878)
chr4 (2-88)||(15223506-15223592)
chr4 (2-88)||(33740796-33740882)
chr4 (292-353)||(15533469-15533530)
chr4 (292-353)||(36037202-36037263)
chr4 (292-353)||(49548850-49548911)
chr4 (9-88)||(17807021-17807100)
chr4 (2-88)||(12486231-12486317)
chr4 (2-88)||(20161156-20161242)
chr4 (2-88)||(23996999-23997084)
chr4 (2-88)||(25688402-25688488)
chr4 (297-353)||(4832005-4832061)
chr4 (297-353)||(4835300-4835356)
chr4 (2-86)||(38106907-38106990)
chr4 (1-68)||(24048521-24048588)
chr4 (297-353)||(14047474-14047530)
chr4 (297-353)||(30146038-30146094)
chr4 (32-88)||(631780-631836)
chr4 (42-88)||(10711825-10711871)
chr4 (42-88)||(10925595-10925641)
chr4 (2-68)||(13818457-13818523)
chr4 (294-350)||(33685124-33685180)
chr4 (294-349)||(20900137-20900192)
chr4 (294-349)||(27027292-27027347)
chr4 (42-88)||(27532752-27532798)
chr4 (32-85)||(14047308-14047361)
chr4 (9-74)||(40906326-40906391)
chr4 (294-353)||(3336815-3336874)
chr4 (294-328)||(17142574-17142608)
chr4 (297-353)||(4828707-4828766)
chr4 (9-74)||(38106801-38106866)
chr4 (294-354)||(4170366-4170426)
chr4 (294-354)||(14698091-14698151)
chr4 (32-68)||(22635063-22635099)
chr4 (294-354)||(31131994-31132054)
chr4 (294-354)||(41791042-41791102)
chr4 (294-354)||(43258612-43258672)
chr4 (298-353)||(13877452-13877507)
chr4 (294-349)||(13881147-13881202)
chr4 (297-352)||(28916798-28916853)
chr4 (23-68)||(13813969-13814014)
chr4 (23-68)||(13818541-13818586)
chr4 (294-354)||(53388316-53388376)
[»] chr3 (78 HSPs)
chr3 (1-88)||(14764828-14764915)
chr3 (4-88)||(3801932-3802016)
chr3 (4-88)||(54519559-54519643)
chr3 (1-88)||(23372576-23372663)
chr3 (1-88)||(51299492-51299579)
chr3 (2-88)||(13435778-13435864)
chr3 (1-88)||(41093-41180)
chr3 (1-88)||(9532217-9532304)
chr3 (1-88)||(10834974-10835061)
chr3 (1-88)||(18899409-18899499)
chr3 (1-88)||(20249882-20249969)
chr3 (1-88)||(29545971-29546058)
chr3 (2-88)||(12853396-12853482)
chr3 (2-88)||(16795463-16795549)
chr3 (17-88)||(12304149-12304220)
chr3 (17-88)||(16326074-16326145)
chr3 (2-88)||(5219807-5219893)
chr3 (2-88)||(8928900-8928986)
chr3 (2-88)||(11301698-11301784)
chr3 (2-88)||(19774158-19774244)
chr3 (292-353)||(3802220-3802281)
chr3 (292-353)||(9532508-9532569)
chr3 (292-353)||(12304424-12304485)
chr3 (292-353)||(14764563-14764624)
chr3 (2-88)||(7108198-7108284)
chr3 (2-88)||(7112133-7112219)
chr3 (2-88)||(11068573-11068659)
chr3 (2-88)||(11167126-11167212)
chr3 (2-88)||(11853666-11853752)
chr3 (294-352)||(18899719-18899777)
chr3 (2-88)||(22320089-22320175)
chr3 (2-88)||(22335144-22335230)
chr3 (2-88)||(28948421-28948507)
chr3 (2-88)||(55021336-55021422)
chr3 (11-88)||(14664394-14664471)
chr3 (11-88)||(14667558-14667635)
chr3 (292-353)||(54519847-54519908)
chr3 (294-350)||(10834711-10834767)
chr3 (294-353)||(20249667-20249726)
chr3 (2-88)||(30064344-30064431)
chr3 (2-88)||(4108822-4108908)
chr3 (2-88)||(4112671-4112757)
chr3 (2-88)||(15616137-15616223)
chr3 (292-353)||(23372311-23372372)
chr3 (292-353)||(51299783-51299844)
chr3 (297-353)||(17548779-17548835)
chr3 (1-88)||(38312890-38312976)
chr3 (294-353)||(1989802-1989861)
chr3 (33-88)||(14670017-14670072)
chr3 (33-88)||(14681541-14681596)
chr3 (9-88)||(15963464-15963543)
chr3 (9-88)||(15967388-15967467)
chr3 (9-88)||(15971312-15971391)
chr3 (2-88)||(18933388-18933475)
chr3 (294-353)||(29545685-29545744)
chr3 (294-353)||(38312654-38312713)
chr3 (10-88)||(11912395-11912473)
chr3 (2-88)||(14497908-14497993)
chr3 (2-88)||(16751934-16752020)
chr3 (297-349)||(13026902-13026954)
chr3 (297-353)||(34853106-34853162)
chr3 (2-88)||(12337216-12337302)
chr3 (32-88)||(15463868-15463924)
chr3 (42-88)||(4590193-4590239)
chr3 (42-88)||(8491765-8491811)
chr3 (42-88)||(17318542-17318588)
chr3 (9-74)||(15555605-15555670)
chr3 (10-86)||(16840238-16840314)
chr3 (32-88)||(23173287-23173343)
chr3 (294-353)||(180071-180130)
chr3 (294-349)||(23396572-23396627)
chr3 (42-86)||(14068097-14068141)
chr3 (2-74)||(15564811-15564883)
chr3 (295-354)||(54972689-54972748)
chr3 (295-354)||(54975299-54975358)
chr3 (295-354)||(54977909-54977968)
chr3 (297-350)||(18958287-18958340)
chr3 (294-354)||(55292995-55293055)
[»] chr2 (40 HSPs)
chr2 (1-88)||(10686279-10686366)
chr2 (1-88)||(19663590-19663677)
chr2 (1-88)||(20260216-20260303)
chr2 (1-88)||(9240633-9240720)
chr2 (1-88)||(6481743-6481830)
chr2 (1-88)||(6485210-6485297)
chr2 (1-88)||(37378995-37379082)
chr2 (1-88)||(21074540-21074627)
chr2 (2-88)||(10103329-10103415)
chr2 (2-88)||(12902639-12902725)
chr2 (295-353)||(19663259-19663317)
chr2 (2-88)||(24630080-24630166)
chr2 (2-88)||(24645111-24645197)
chr2 (2-88)||(24647054-24647140)
chr2 (2-88)||(24647887-24647973)
chr2 (2-88)||(27381026-27381112)
chr2 (2-88)||(27384996-27385082)
chr2 (2-88)||(30346690-30346776)
chr2 (292-353)||(10686057-10686118)
chr2 (292-353)||(20260507-20260568)
chr2 (297-353)||(26895971-26896027)
chr2 (294-353)||(6481986-6482045)
chr2 (294-353)||(6485453-6485512)
chr2 (9-88)||(41532475-41532554)
chr2 (295-353)||(6261981-6262039)
chr2 (10-88)||(27600339-27600417)
chr2 (2-88)||(31343877-31343963)
chr2 (297-353)||(6478607-6478663)
chr2 (32-88)||(9783984-9784040)
chr2 (294-353)||(9240919-9240978)
chr2 (297-353)||(22702738-22702794)
chr2 (294-353)||(23374666-23374725)
chr2 (299-353)||(10040518-10040572)
chr2 (309-353)||(19803523-19803567)
chr2 (310-353)||(24275942-24275985)
chr2 (297-353)||(22109202-22109258)
chr2 (294-354)||(31502927-31502987)
chr2 (294-354)||(31505493-31505553)
chr2 (294-354)||(20591757-20591817)
chr2 (294-354)||(28348437-28348497)
[»] scaffold1427 (2 HSPs)
scaffold1427 (4-88)||(162-246)
scaffold1427 (292-353)||(429-490)
[»] chr8 (45 HSPs)
chr8 (1-85)||(8729645-8729729)
chr8 (1-88)||(11774255-11774342)
chr8 (4-88)||(363230-363314)
chr8 (1-88)||(8415009-8415096)
chr8 (2-88)||(27942718-27942804)
chr8 (9-88)||(23427793-23427872)
chr8 (9-88)||(14399125-14399204)
chr8 (2-88)||(21409860-21409947)
chr8 (2-88)||(21804352-21804439)
chr8 (9-88)||(44385866-44385945)
chr8 (2-88)||(21829493-21829579)
chr8 (2-88)||(21974216-21974302)
chr8 (2-88)||(43250162-43250248)
chr8 (9-88)||(18864137-18864216)
chr8 (294-353)||(20453899-20453958)
chr8 (2-88)||(21978326-21978412)
chr8 (2-88)||(22110561-22110647)
chr8 (294-352)||(44475901-44475959)
chr8 (294-352)||(44479163-44479221)
chr8 (32-88)||(23913255-23913311)
chr8 (294-353)||(21862056-21862115)
chr8 (9-88)||(30941597-30941676)
chr8 (294-353)||(8729471-8729530)
chr8 (294-352)||(20459521-20459579)
chr8 (10-88)||(21328534-21328612)
chr8 (294-353)||(43111685-43111744)
chr8 (294-353)||(44431311-44431370)
chr8 (42-88)||(21386159-21386205)
chr8 (294-352)||(32949394-32949452)
chr8 (294-354)||(28853317-28853377)
chr8 (294-353)||(19881557-19881616)
chr8 (10-85)||(42560917-42560992)
chr8 (42-88)||(21968025-21968071)
chr8 (42-88)||(21980865-21980911)
chr8 (42-88)||(21985848-21985894)
chr8 (42-88)||(22000811-22000857)
chr8 (304-349)||(38186345-38186390)
chr8 (42-88)||(22009229-22009275)
chr8 (294-351)||(365349-365406)
chr8 (294-354)||(6608940-6609000)
chr8 (294-354)||(7301839-7301899)
chr8 (294-354)||(45135626-45135686)
chr8 (296-350)||(15005093-15005147)
chr8 (294-354)||(17794749-17794809)
chr8 (297-353)||(24708420-24708476)
[»] scaffold0544 (3 HSPs)
scaffold0544 (1-88)||(3549-3636)
scaffold0544 (292-353)||(3284-3345)
scaffold0544 (1-52)||(1-52)
[»] chr6 (50 HSPs)
chr6 (1-88)||(4475754-4475841)
chr6 (1-88)||(12941180-12941267)
chr6 (1-88)||(23955328-23955415)
chr6 (1-88)||(27222791-27222878)
chr6 (1-88)||(28290927-28291014)
chr6 (2-88)||(14470841-14470927)
chr6 (2-88)||(22075423-22075509)
chr6 (292-353)||(12941471-12941532)
chr6 (294-354)||(24266445-24266505)
chr6 (2-86)||(31479497-31479581)
chr6 (2-88)||(8242372-8242458)
chr6 (2-88)||(11565361-11565447)
chr6 (2-88)||(11716973-11717059)
chr6 (2-88)||(12620366-12620452)
chr6 (294-352)||(23351758-23351816)
chr6 (2-88)||(23537941-23538027)
chr6 (2-88)||(23988263-23988349)
chr6 (2-88)||(27416560-27416646)
chr6 (294-350)||(221392-221448)
chr6 (9-88)||(23400644-23400724)
chr6 (9-88)||(23393608-23393687)
chr6 (9-88)||(23413516-23413595)
chr6 (2-88)||(16758675-16758761)
chr6 (2-88)||(22947627-22947713)
chr6 (2-88)||(22951583-22951669)
chr6 (2-88)||(23870071-23870157)
chr6 (2-88)||(23874027-23874113)
chr6 (2-88)||(27555500-27555585)
chr6 (292-353)||(4476046-4476107)
chr6 (15-88)||(19869160-19869233)
chr6 (297-353)||(29848920-29848976)
chr6 (294-353)||(13763617-13763676)
chr6 (294-353)||(28290712-28290771)
chr6 (2-88)||(22861715-22861801)
chr6 (297-353)||(16133873-16133929)
chr6 (297-353)||(29417317-29417373)
chr6 (10-88)||(1254127-1254205)
chr6 (10-88)||(34297805-34297883)
chr6 (297-350)||(19444552-19444605)
chr6 (2-88)||(16622797-16622881)
chr6 (32-86)||(2076276-2076330)
chr6 (42-88)||(18918613-18918659)
chr6 (12-88)||(25737862-25737938)
chr6 (42-88)||(18953516-18953562)
chr6 (294-354)||(2288560-2288620)
chr6 (32-68)||(23537887-23537923)
chr6 (297-353)||(23621627-23621683)
chr6 (297-350)||(8717444-8717496)
chr6 (294-354)||(15538629-15538689)
chr6 (294-354)||(15686838-15686898)
[»] chr1 (36 HSPs)
chr1 (1-88)||(32649026-32649113)
chr1 (2-86)||(29533847-29533931)
chr1 (1-88)||(16370884-16370971)
chr1 (4-85)||(20439188-20439269)
chr1 (2-88)||(22132131-22132217)
chr1 (2-88)||(33795993-33796079)
chr1 (294-353)||(19209253-19209312)
chr1 (2-88)||(20230171-20230258)
chr1 (294-353)||(28311850-28311909)
chr1 (2-88)||(1009222-1009308)
chr1 (2-88)||(1926828-1926914)
chr1 (2-88)||(16376848-16376934)
chr1 (2-88)||(20925842-20925928)
chr1 (294-354)||(16371127-16371187)
chr1 (2-88)||(41389697-41389783)
chr1 (297-353)||(13529115-13529171)
chr1 (32-88)||(41801311-41801367)
chr1 (294-353)||(20439014-20439073)
chr1 (2-88)||(39245203-39245287)
chr1 (2-88)||(39248758-39248842)
chr1 (2-88)||(52634228-52634314)
chr1 (297-353)||(29534179-29534235)
chr1 (297-353)||(32649529-32649585)
chr1 (294-353)||(16400393-16400452)
chr1 (42-88)||(21406253-21406299)
chr1 (294-349)||(18251856-18251911)
chr1 (294-349)||(18269859-18269914)
chr1 (294-349)||(18274537-18274592)
chr1 (294-353)||(28204957-28205016)
chr1 (294-354)||(20578831-20578891)
chr1 (294-354)||(20586524-20586584)
chr1 (294-349)||(20900680-20900735)
chr1 (294-343)||(16397625-16397674)
chr1 (294-354)||(293531-293591)
chr1 (297-349)||(21181818-21181870)
chr1 (295-354)||(45306662-45306721)
[»] scaffold0842 (1 HSPs)
scaffold0842 (9-88)||(5209-5288)
[»] scaffold0124 (3 HSPs)
scaffold0124 (2-85)||(37568-37651)
scaffold0124 (2-88)||(25600-25686)
scaffold0124 (294-353)||(37394-37453)
[»] scaffold0080 (2 HSPs)
scaffold0080 (2-88)||(33897-33983)
scaffold0080 (38-88)||(28468-28518)
[»] scaffold0410 (1 HSPs)
scaffold0410 (2-88)||(14804-14890)
[»] scaffold0142 (1 HSPs)
scaffold0142 (9-85)||(8775-8851)
[»] scaffold1852 (1 HSPs)
scaffold1852 (2-88)||(853-939)
[»] scaffold0525 (2 HSPs)
scaffold0525 (2-88)||(5563-5649)
scaffold0525 (294-354)||(11541-11601)
[»] scaffold0327 (1 HSPs)
scaffold0327 (13-88)||(18794-18869)
[»] scaffold0216 (1 HSPs)
scaffold0216 (294-353)||(20968-21027)
[»] scaffold0166 (1 HSPs)
scaffold0166 (2-85)||(11095-11178)
[»] scaffold0349 (1 HSPs)
scaffold0349 (2-88)||(11011-11097)
[»] scaffold0028 (1 HSPs)
scaffold0028 (2-88)||(60358-60444)
[»] scaffold0003 (2 HSPs)
scaffold0003 (2-88)||(70715-70801)
scaffold0003 (294-353)||(137279-137338)
[»] scaffold0338 (1 HSPs)
scaffold0338 (294-350)||(4433-4489)
[»] scaffold0607 (1 HSPs)
scaffold0607 (294-353)||(2406-2465)
[»] scaffold0141 (2 HSPs)
scaffold0141 (9-88)||(15607-15686)
scaffold0141 (294-354)||(32531-32591)
[»] scaffold0157 (1 HSPs)
scaffold0157 (2-88)||(34160-34246)
[»] scaffold0061 (1 HSPs)
scaffold0061 (2-88)||(68588-68674)
[»] scaffold0023 (1 HSPs)
scaffold0023 (2-88)||(11737-11823)
[»] scaffold0575 (1 HSPs)
scaffold0575 (32-88)||(6993-7049)
[»] scaffold0117 (1 HSPs)
scaffold0117 (297-353)||(41537-41593)
[»] scaffold0021 (1 HSPs)
scaffold0021 (297-353)||(145780-145836)
[»] scaffold0013 (1 HSPs)
scaffold0013 (32-88)||(74364-74420)
[»] scaffold0486 (1 HSPs)
scaffold0486 (9-88)||(8544-8623)
[»] scaffold0188 (1 HSPs)
scaffold0188 (297-352)||(887-942)
[»] scaffold0599 (1 HSPs)
scaffold0599 (10-88)||(4089-4167)
[»] scaffold0089 (1 HSPs)
scaffold0089 (294-348)||(1558-1612)
[»] scaffold0299 (1 HSPs)
scaffold0299 (2-88)||(5785-5871)
[»] scaffold0042 (1 HSPs)
scaffold0042 (294-353)||(50454-50513)
[»] scaffold0031 (1 HSPs)
scaffold0031 (41-88)||(37235-37282)
[»] scaffold0447 (1 HSPs)
scaffold0447 (299-353)||(13666-13720)
[»] scaffold0383 (1 HSPs)
scaffold0383 (299-353)||(11661-11715)
[»] scaffold0372 (1 HSPs)
scaffold0372 (2-88)||(6353-6438)
[»] scaffold0970 (1 HSPs)
scaffold0970 (297-345)||(3752-3800)
[»] scaffold0200 (1 HSPs)
scaffold0200 (40-88)||(10765-10813)
[»] scaffold0825 (1 HSPs)
scaffold0825 (294-353)||(2149-2208)
[»] scaffold0034 (1 HSPs)
scaffold0034 (294-353)||(35264-35323)
[»] scaffold0380 (1 HSPs)
scaffold0380 (42-88)||(3974-4020)
[»] scaffold0139 (1 HSPs)
scaffold0139 (42-88)||(23970-24016)
[»] scaffold0029 (1 HSPs)
scaffold0029 (42-88)||(62872-62918)
[»] scaffold0002 (1 HSPs)
scaffold0002 (10-76)||(115390-115455)
[»] scaffold0635 (1 HSPs)
scaffold0635 (299-353)||(6498-6552)
[»] scaffold0109 (1 HSPs)
scaffold0109 (42-88)||(37230-37276)
[»] scaffold0004 (1 HSPs)
scaffold0004 (309-353)||(59012-59056)
[»] scaffold0066 (1 HSPs)
scaffold0066 (297-350)||(47934-47987)
[»] scaffold0413 (1 HSPs)
scaffold0413 (317-353)||(10316-10352)
[»] scaffold0151 (1 HSPs)
scaffold0151 (297-353)||(1753-1809)
[»] scaffold0107 (1 HSPs)
scaffold0107 (294-354)||(2524-2584)
[»] scaffold0049 (1 HSPs)
scaffold0049 (294-354)||(82221-82281)
[»] scaffold0044 (1 HSPs)
scaffold0044 (294-354)||(6375-6435)
[»] scaffold0500 (1 HSPs)
scaffold0500 (294-353)||(12077-12136)
[»] scaffold0381 (1 HSPs)
scaffold0381 (294-353)||(14336-14395)
[»] scaffold0278 (1 HSPs)
scaffold0278 (294-353)||(22513-22572)
[»] scaffold0058 (1 HSPs)
scaffold0058 (294-353)||(40665-40724)
[»] scaffold0556 (1 HSPs)
scaffold0556 (294-352)||(9162-9220)
[»] scaffold0293 (1 HSPs)
scaffold0293 (32-62)||(21390-21420)
[»] scaffold0001 (1 HSPs)
scaffold0001 (10-88)||(163600-163678)
[»] scaffold1873 (2 HSPs)
scaffold1873 (2-51)||(651-700)
scaffold1873 (40-68)||(605-633)


Alignment Details
Target: scaffold0337 (Bit Score: 84; Significance: 7e-40; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 10941 - 10854
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10941 tttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 10854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 10651 - 10592
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10651 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 10592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 84; Significance: 7e-40; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 109560 - 109647
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  109560 tttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 109647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 109803 - 109862
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  109803 aacaataatgttcttacttctttaactttagtaacacttgctaattcaaccaacaacgac 109862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 84; Significance: 7e-40; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 224262 - 224175
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  224262 tttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 224175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 223934 - 223875
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  223934 aacaataatgttcttacttctttaactttagtaactcttactaattcaaccaacaacgac 223875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 7e-40; HSPs: 81)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 14420746 - 14420833
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14420746 tttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 14420833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 18871256 - 18871343
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18871256 tttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 18871343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 15166209 - 15166293
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 85  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15166209 tttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 15166293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 10898016 - 10897929
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10898016 tttcataataataattattcataaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 10897929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 18606305 - 18606384
Alignment:
Q  9 taataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18606305 taataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 18606384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 834164 - 834078
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  834164 ttcataataataattattcatcaaacatttcattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 834078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 1199344 - 1199258
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1199344 ttcataataataattattcatcaaacatttcattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 1199258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 146459 - 146546
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  146459 tttcataataataattattcatcaaacattccattagcaattcatgagtagaagacaacttatcaacttaacataaccatcatcaagt 146546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 11660241 - 11660328
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11660241 tttcataataataattattcatcaaacatttcattagcaattcatgaataaaagacaacttaccaacttaacataaccatcatcaagt 11660328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 16004963 - 16005050
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16004963 tttcataataatagttattcatcgaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 16005050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 41283604 - 41283691
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41283604 tttcataataataatttttcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccctcatcaagt 41283691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 838252 - 838166
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  838252 ttcataataataattattcatcaaacattttattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 838166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 1203432 - 1203346
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1203432 ttcataataataattattcatcaaacattttattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 1203346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 13891590 - 13891676
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13891590 ttcataataataattattcatcaaacatctcattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 13891676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 16110094 - 16110008
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16110094 ttcataataataattattcatcaaacatttcattagcaattcatgaataaaagataacttatcaacttaacataaccatcatcaagt 16110008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 11302267 - 11302350
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 85  Q
    |||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  11302267 ttcataataataattattcatcaaacattccattagcattacatgaataaaagacaacttatcaacttaacataaccatcatca 11302350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 10607440 - 10607353
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| |||||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10607440 tttcataataataattattcatcaaacatctcattatcaattcatgactaaaagacaacttatcaacttaacataaccatcatcaagt 10607353  T

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Target: chr7; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 13891973 - 13892059
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  13891973 ttcataataataattattcatcaaacatctcattagcaattcatgcaaaaaagacaacttatcaacttaacataaccatcatcaagt 13892059  T

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Target: chr7; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 16582380 - 16582467
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| |||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  16582380 tttcataataataattattcatcaaacatctcattatcaattcatgaaaaaaagacaacttatcaacttatcataaccatcatcaagt 16582467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 39721155 - 39721242
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaac-ttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  39721155 ttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaactttaacataaccatcatcaagt 39721242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 39268432 - 39268346
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  |||||  |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  39268432 ttcataataataattattcatcaaacatctcattataaattcatgaataaaaggcaacttatcaacttaacataaccatcatcaagt 39268346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 18606588 - 18606649
Alignment:
Q  292 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18606588 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 18606649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 18871547 - 18871608
Alignment:
Q  292 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18871547 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 18871608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 7520336 - 7520248
Alignment:
Q  1 tttcatattaataatt-attcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| |||||||| |||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7520336 tttcataataataatttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataatcatcatcaagt 7520248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 11660569 - 11660628
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11660569 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 11660628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 13255217 - 13255276
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13255217 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 13255276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 15083185 - 15083272
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaa-cttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  15083185 ttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaattttaacataaccatcatcaagt 15083272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 31685 - 31771
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  31685 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 31771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 72490 - 72404
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  72490 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 72404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 76599 - 76513
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  76599 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 76513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 9752626 - 9752540
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  |||||  |||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  9752626 ttcataataataattattcatcaaacatctcattataaattcatgaataaaaggcaacttatcaacttaacataaccatcaccaagt 9752540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 12706241 - 12706155
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  12706241 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 12706155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 12713500 - 12713586
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  12713500 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 12713586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 12722158 - 12722244
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  12722158 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 12722244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 16908628 - 16908542
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  16908628 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 16908542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 18277954 - 18278040
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  18277954 ttcataataataattattcatcaaacatctcattatcaattcatcaataaaagacaacttatcaatttaacataaacatcatcaagt 18278040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 18281918 - 18282004
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  18281918 ttcataataataattattcatcaaacatctcattatcaattcatcaataaaagacaacttatcaatttaacataaacatcatcaagt 18282004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 18424195 - 18424281
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| ||||||||||||||||| |||  ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||    
T  18424195 ttcataataataattattcatcaaccatctcattatcatttcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 18424281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 23666370 - 23666309
Alignment:
Q  292 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23666370 ttaacaataatgttattacttctttaactttagtaacacttactaattcaaccaacaacgac 23666309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 29795413 - 29795474
Alignment:
Q  292 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  29795413 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacgacgac 29795474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 29799232 - 29799293
Alignment:
Q  292 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  29799232 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacgacgac 29799293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 14420989 - 14421048
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14420989 aacaataatgttcttacttctttaactttagtaacacttgctaattcaaccaacaacgac 14421048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 26291116 - 26291203
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaac-ttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||| ||||||||  |||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26291116 ttcataataataattattcgtcaaacatctcattattaattcatgaataaaagacaacttatcaactttaacataaccatcatcaagt 26291203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 45171612 - 45171533
Alignment:
Q  9 taataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  45171612 taatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaatttaacataaacatcatcaagt 45171533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 2531450 - 2531365
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||| ||||||  | ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2531450 ttcataataataattattcataaaacatctctttatcaattcatgaataaaagacaacttatcaacttaacataa-catcatcaagt 2531365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 2833600 - 2833514
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| ||||||||||||||  |||||  ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||    
T  2833600 ttcataataataattattcattgaacatctcattatcatttcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 2833514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 12717247 - 12717333
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| ||||| |||||    
T  12717247 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcagcaagt 12717333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 292 - 350
Target Start/End: Original strand, 14565338 - 14565396
Alignment:
Q  292 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaac 350  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14565338 ttaacaataatgttcttacttctttaactttagtaatacttactaattcaaccaacaac 14565396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 16109796 - 16109740
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16109796 aataatattcttacttctttaactttagtaacacttactaattcaaccaacaacgac 16109740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 29003578 - 29003634
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29003578 aataatattcttacttctttaactttagtaacacttactaattcaaccaacaacgac 29003634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 34956892 - 34956948
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34956892 aataatattcttacttctttaactttagtaacacttactaattcaaccaacaacgac 34956948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 48742929 - 48742985
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  48742929 aataatgttcttacttctttaactttagtaacacttactaattcaaccgacaacgac 48742985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 146752 - 146811
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  146752 aacaataatgttcttacttctttaactttagtaacacttgctaattcaatcaacaacgac 146811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 10897723 - 10897664
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  10897723 aacaataatgttcttacttctttaactttagtaacacttgctaattcaaccatcaacgac 10897664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 11302465 - 11302524
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  11302465 aacaataatgttcttacttctttaactttagtaacgcttgctaattcaaccaacaacgac 11302524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 20486733 - 20486788
Alignment:
Q  33 attagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20486733 attatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 20486788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 15213016 - 15213094
Alignment:
Q  10 aataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||||||||||| |||  |||||||||| |||||||||   ||||||||||||||||||||||||||||||||||    
T  15213016 aataattattcatcaaccatctcattagcaatacatgaataaggaacaacttatcaacttaacataaccatcatcaagt 15213094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 16572857 - 16572915
Alignment:
Q  295 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  16572857 acaataatgttcttacttcttcaactttaataacacttactaattcaaccaacaacgac 16572915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 16592805 - 16592747
Alignment:
Q  295 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  16592805 acaataatgttcttacttcttcaactttaataacacttactaattcaaccaacaacgac 16592747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 833820 - 833764
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  833820 aataatattcttacttctttaactttagtaacacttattaattcaaccaacaacgac 833764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 1199000 - 1198944
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  1199000 aataatattcttacttctttaactttagtaacacttattaattcaaccaacaacgac 1198944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 25928460 - 25928404
Alignment:
Q  32 cattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  25928460 cattagcaattcatgaataaaaaacaacttatcaacttaacataaccatcataaagt 25928404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 15166408 - 15166467
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  15166408 aacaataatattcttacttctttaactttagtaacacttgctaattcaatcaacaacgac 15166467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 1860119 - 1860054
Alignment:
Q  23 caaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||  ||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  1860119 caaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacgtcatcaagt 1860054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 296 - 353
Target Start/End: Complemental strand, 13850400 - 13850343
Alignment:
Q  296 caataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||    
T  13850400 caataatgttcatacttcttcaactttaataacacttactaattcaaccaacaacgac 13850343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 304 - 353
Target Start/End: Original strand, 16007681 - 16007730
Alignment:
Q  304 ttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16007681 ttcttacttctttaactttagtaacacttgctaattcaaccaacaacgac 16007730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 837849 - 837793
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  837849 aataatattcttacttctttaactttattaacacttattaattcaaccaacaacgac 837793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 1203029 - 1202973
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  1203029 aataatattcttacttctttaactttattaacacttattaattcaaccaacaacgac 1202973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 13919501 - 13919445
Alignment:
Q  32 cattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  13919501 cattatcaattcatgaataaaagacaacttatcaacttaacataaacgtcatcaagt 13919445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 9752710 - 9752644
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaact 68  Q
    |||||| |||||||||||||||||||||  |||||  |||||||| |||||||||||||||||||||    
T  9752710 ttcataataataattattcatcaaacatctcattataaattcatggataaaagacaacttatcaact 9752644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 35365639 - 35365699
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| |||||||| ||||||| |||| |||||||| ||||||||||||||||    
T  35365639 aacaataatattcctacttcttcaactttaataactcttactaaatcaaccaacaacgaca 35365699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 4992853 - 4992912
Alignment:
Q  295 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    |||||||| ||| |||||||| ||||||| |||| |||||||| ||||||||||||||||    
T  4992853 acaataatattcatacttcttcaactttaataactcttactaaatcaaccaacaacgaca 4992912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 16005682 - 16005741
Alignment:
Q  295 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    |||||||| ||| |||||||| ||||||| |||| |||||||| ||||||||||||||||    
T  16005682 acaataatattcatacttcttcaactttaataactcttactaaatcaaccaacaacgaca 16005741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 8775664 - 8775724
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| ||||||||  |||||| |||| |||||||| ||||||||||||||||    
T  8775664 aacaataatattcatacttcttcgactttaataactcttactaaatcaaccaacaacgaca 8775724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 21744064 - 21744004
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| ||||||||  |||||| |||| |||||||| ||||||||||||||||    
T  21744064 aacaataatattcatacttcttcgactttaataactcttactaaatcaaccaacaacgaca 21744004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 14189780 - 14189721
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||| | || ||| || |||| |||||||||||||| ||||||||||||||    
T  14189780 aacaataatgttcatcctccttcaattttaataacacttactaatccaaccaacaacgac 14189721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 14192535 - 14192476
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||| | || ||| || |||| |||||||||||||| ||||||||||||||    
T  14192535 aacaataatgttcatcctccttcaattttaataacacttactaatccaaccaacaacgac 14192476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 16185524 - 16185570
Alignment:
Q  42 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||| ||||| ||||||||||||||||| ||| |||||||||    
T  16185524 tcatgaatagaagacgacttatcaacttaacatgaccctcatcaagt 16185570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 9752764 - 9752728
Alignment:
Q  32 cattagcaattcatgaataaaagacaacttatcaact 68  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  9752764 cattatcaattcatgaataaaagataacttatcaact 9752728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 13396240 - 13396180
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| |||||||| | |||||  |||||||||||| ||||||||| ||||||    
T  13396240 aacaataatattcatacttcttcatctttaaaaacacttactaaatcaaccaacgacgaca 13396180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 39268486 - 39268450
Alignment:
Q  32 cattagcaattcatgaataaaagacaacttatcaact 68  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  39268486 cattagcaactcatgaatagaagacaacttatcaact 39268450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 7e-40; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 28372201 - 28372114
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28372201 tttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 28372114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 37600128 - 37600041
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37600128 tttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 37600041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22338971 - 22339058
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22338971 tttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacgtaacataaccatcatcaagt 22339058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 38146538 - 38146451
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  38146538 tttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataatcatcatcaagt 38146451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 22335441 - 22335526
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaa 86  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22335441 tttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacgtaacataaccatcatcaa 22335526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 19510421 - 19510508
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19510421 tttcataataataattattcatcaaacgttccattagcaattcatgaataaaagacaacctatcaacttaacataaccatcatcaagt 19510508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 33474051 - 33473964
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33474051 tttcataataataattattcatcaaacattccattaacaattcatgaataaaagacaacttatcaacttaacataaccctcatcaagt 33473964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 23113519 - 23113435
Alignment:
Q  4 catattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  23113519 cataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacacaatcatcatcaagt 23113435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 41878768 - 41878684
Alignment:
Q  4 catattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  41878768 cataataataattattcatcaaacattccattagcaattcataaataaaagacaacttatcaacttaacataactatcatcaagt 41878684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 22120711 - 22120624
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| |||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22120711 tttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 22120624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 15238236 - 15238150
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||    
T  15238236 ttcataataataattattcatcaaacatctcattatcatttcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 15238150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 23113231 - 23113170
Alignment:
Q  292 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23113231 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 23113170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 38146247 - 38146186
Alignment:
Q  292 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38146247 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 38146186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 41878480 - 41878419
Alignment:
Q  292 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41878480 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 41878419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 18354764 - 18354843
Alignment:
Q  9 taataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  18354764 taataattattcatcaaacatctcattatcaattcatgaataaaagacaatttatcaacttaacataaacatcatcaagt 18354843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 24768681 - 24768598
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 85  Q
    |||||| || ||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24768681 ttcataatattaattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatca 24768598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 19474291 - 19474205
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  19474291 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 19474205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 20294474 - 20294560
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  20294474 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 20294560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 9775101 - 9775162
Alignment:
Q  292 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9775101 ttaacaataatgttattacttctttaactttagtaacacttactaattcaaccaacaacgac 9775162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 19510664 - 19510723
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19510664 aacaataatgttcttacttctttaactttagtaacacttgctaattcaaccaacaacgac 19510723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 22469508 - 22469567
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22469508 aacaataatattcttacttctttaactttagtaacacttactaattcaaccaacaacgac 22469567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 10751777 - 10751863
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| ||||||||||||||||| |||  ||||| || ||| |||||||||||||||||||||||||||||||| |||||||||||    
T  10751777 ttcataataataattattcatcaaccatctcattatcatttcttgaataaaagacaacttatcaacttaacataaacatcatcaagt 10751863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 20912363 - 20912285
Alignment:
Q  10 aataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||||||||||  |||||||||||    
T  20912363 aataattattcatcaaacatctcattatcatttcatgaataaaagacaacttatcaacttaacatacacatcatcaagt 20912285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 40727517 - 40727432
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  | ||| |||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  40727517 ttcataataataattattcatcaaacatctctttatcaattcatgaataaaagataacttatcaacttaacataa-catcatcaagt 40727432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 11219528 - 11219601
Alignment:
Q  15 ttattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||||||||||  ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  11219528 ttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaatttaacataaacatcatcaagt 11219601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 10816060 - 10816116
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10816060 aataatattcttacttctttaactttagtaacacttactaattcaaccaacaacgac 10816116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 23538059 - 23538115
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23538059 aataatattcttacttctttaactttagtaacacttactaattcaaccaacaacgac 23538115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 22358526 - 22358467
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  22358526 aacaataatgttcttacttctttaactttagtaacacttactaattcaattaacaacgac 22358467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 22749363 - 22749422
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22749363 aacaataatattcttacttctttaactttagtaacactttctaattcaaccaacaacgac 22749422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 24277972 - 24277913
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  24277972 aacaataatgttcttacttcttcaactttaataacacttactaattcaaccaacaacgac 24277913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 24384241 - 24384300
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  24384241 aacaataatgttcttacttcttcaactttaataacacttactaattcaaccaacaacgac 24384300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 42959717 - 42959776
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  42959717 aacaataatgttcttacttctttaactttagtaacactttctaattcaaccagcaacgac 42959776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 22335793 - 22335851
Alignment:
Q  295 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  22335793 acaataatgttcttactcctttaactttagtaacagttactaattcaaccaacaacgac 22335851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 22339331 - 22339389
Alignment:
Q  295 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  22339331 acaataatgttcttactcctttaactttagtaacagttactaattcaaccaacaacgac 22339389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 294 - 352
Target Start/End: Complemental strand, 37599835 - 37599777
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacga 352  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  37599835 aacaataatgttcttacttctttaactttagtaacacttgctaattcaaccatcaacga 37599777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 11224114 - 11224187
Alignment:
Q  15 ttattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||||||||||  ||||| |||||||||||||||||||| |||||||| ||||||||| |||||||||||    
T  11224114 ttattcatcaaacatctcattatcaattcatgaataaaagacagcttatcaatttaacataaacatcatcaagt 11224187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 11227936 - 11228009
Alignment:
Q  15 ttattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||||||||||  ||||| |||||||||||||||||||| |||||||| ||||||||| |||||||||||    
T  11227936 ttattcatcaaacatctcattatcaattcatgaataaaagacagcttatcaatttaacataaacatcatcaagt 11228009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 22108567 - 22108503
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaa 66  Q
    |||||| |||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||    
T  22108567 ttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaa 22108503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 11226130 - 11226203
Alignment:
Q  15 ttattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||||||||||  ||| | |||||||||||||||||||| |||||||| ||||||||| |||||||||||    
T  11226130 ttattcatcaaacatctcatgatcaattcatgaataaaagacagcttatcaatttaacataaacatcatcaagt 11226203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 11229926 - 11229999
Alignment:
Q  15 ttattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||||||||||  ||| | |||||||||||||||||||| |||||||| ||||||||| |||||||||||    
T  11229926 ttattcatcaaacatctcatgatcaattcatgaataaaagacagcttatcaatttaacataaacatcatcaagt 11229999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 22749152 - 22749207
Alignment:
Q  33 attagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||| ||| ||||||||| | |||||||||||||||||||||||||||||||||||    
T  22749152 attaacaactcatgaatataggacaacttatcaacttaacataaccatcatcaagt 22749207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 36459516 - 36459594
Alignment:
Q  10 aataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||||||||||| |||  |||||||||  |||||||||   |||||||||||||||||||||| |||||| ||||    
T  36459516 aataattattcatcaaccatctcattagcaaaacatgaataaggaacaacttatcaacttaacataatcatcattaagt 36459594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 29325999 - 29325940
Alignment:
Q  295 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    |||||||| ||| |||||||| ||||||| |||| |||||||| ||||||||||||||||    
T  29325999 acaataatattcatacttcttcaactttaataactcttactaaatcaaccaacaacgaca 29325940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 43120581 - 43120641
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| ||||||||  |||||| |||| |||||||| ||||||||||||||||    
T  43120581 aacaataatattcatacttcttcgactttaataactcttactaaatcaaccaacaacgaca 43120641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 43124114 - 43124174
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| ||||||||  |||||| |||| |||||||| ||||||||||||||||    
T  43124114 aacaataatattcatacttcttcgactttaataactcttactaaatcaaccaacaacgaca 43124174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 27870138 - 27870078
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| |||||||| | |||||  |||||||||||| ||||||||| ||||||    
T  27870138 aacaataatattcatacttcttcatctttaaaaacacttactaaatcaaccaacgacgaca 27870078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 7e-40; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 15533178 - 15533265
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15533178 tttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 15533265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 18211563 - 18211650
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18211563 tttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaactcaacataaccatcatcaagt 18211650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 24048504 - 24048417
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24048504 tttcataataataattattcatcaaacatttcattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 24048417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 36036911 - 36036998
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36036911 tttcataataataattattcatgaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 36036998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 30145743 - 30145829
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30145743 ttcataataataattattcatcaaacatttcattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 30145829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 28384810 - 28384897
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28384810 tttcataataataattattcctcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccctcatcaagt 28384897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 49549200 - 49549115
Alignment:
Q  4 catattaataattattcatcaaacattccattagcaattcatgaataaaagacaac-ttatcaacttaacataaccatcatcaagt 88  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  49549200 cataataataattattcatcaaacattccattagcaattcatgaataaaagacaacggtatcaacttaacataaccatcatcaagt 49549115  T

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Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 17052564 - 17052478
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17052564 ttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataatcatcatcaagt 17052478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 22635045 - 22634959
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22635045 ttcataataataattattcatcaaacatctcattataaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 22634959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 12422910 - 12422989
Alignment:
Q  9 taataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12422910 taataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataactatcatcaagt 12422989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 20158566 - 20158480
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| ||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20158566 ttcataataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataagcatcatcaagt 20158480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 20164017 - 20163931
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| ||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20164017 ttcataataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 20163931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 15989484 - 15989543
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15989484 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 15989543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 18211877 - 18211936
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18211877 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 18211936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 24048176 - 24048117
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24048176 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 24048117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 4562892 - 4562806
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  4562892 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 4562806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 5758574 - 5758488
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  5758574 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 5758488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 9555029 - 9555115
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  9555029 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 9555115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 13813951 - 13813865
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  |||||  |||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  13813951 ttcataataataattattcatcaaacatctcattataaattcatgaacaaaaggcaacttatcaacttaacataaccatcatcaagt 13813865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 13818439 - 13818353
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  |||||  |||||||||||||||  |||||||||||||||||||||||||||||||||    
T  13818439 ttcataataataattattcatcaaacatctcattataaattcatgaataaaatgcaacttatcaacttaacataaccatcatcaagt 13818353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 14759110 - 14759024
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  14759110 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 14759024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 14955878 - 14955792
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  14955878 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 14955792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 15223506 - 15223592
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| ||||||||||||||||| |||  ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||    
T  15223506 ttcataataataattattcatcaaccatctcattatcatttcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 15223592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 33740796 - 33740882
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  33740796 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 33740882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 15533469 - 15533530
Alignment:
Q  292 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15533469 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacgacgac 15533530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 36037202 - 36037263
Alignment:
Q  292 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  36037202 ttaacaataatgttcttacctctttaactttagtaacacttactaattcaaccaacaacgac 36037263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 49548911 - 49548850
Alignment:
Q  292 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  49548911 ttaacaataatgttcttacttctttacctttagtaacacttactaattcaaccaacaacgac 49548850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 17807021 - 17807100
Alignment:
Q  9 taataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  17807021 taataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 17807100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 12486231 - 12486317
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||| | |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  12486231 ttcataataataattattcatcaaacatctcatcatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 12486317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 20161242 - 20161156
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| ||||| |||||||||||||||  ||||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||    
T  20161242 ttcataataatacttattcatcaaacatctcattatcaattcttgaataaaagacaacttatcaacttaacataaacattatcaagt 20161156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 23997084 - 23996999
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||| ||||||||||||||||  ||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  23997084 ttcataataatgattattcatcaaacatctcattatcaattcatgaataaaagagaacttatcaactt-acataaccatcatcaagt 23996999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 25688402 - 25688488
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||  |||||||||||||||||||| ||||||||| |||||||||||    
T  25688402 ttcataataataattattcatcaaacatctcattatcaattcactaataaaagacaacttatcaatttaacataaacatcatcaagt 25688488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 4832061 - 4832005
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4832061 aataatattcttacttctttaactttagtaacacttactaattcaaccaacaacgac 4832005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 4835356 - 4835300
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4835356 aataatattcttacttctttaactttagtaacacttactaattcaaccaacaacgac 4835300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 38106907 - 38106990
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaa 86  Q
    |||||| |||||||| |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||||| |||||||||    
T  38106907 ttcataataataattcttcatcaaacattc-attagcaactcatgaatgaaagacaatttatcaacttaacataaacatcatcaa 38106990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 24048588 - 24048521
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaact 68  Q
    ||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||    
T  24048588 tttcataataataattattcatcaaacatttcattaacaattcatgaataaaagacaacttagcaact 24048521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 14047474 - 14047530
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14047474 aataatattcttaattctttaactttagtaacacttactaattcaaccaacaacgac 14047530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 30146038 - 30146094
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  30146038 aataatattcttccttctttaactttagtaacacttactaattcaaccaacaacgac 30146094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 631836 - 631780
Alignment:
Q  32 cattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||    
T  631836 cattagcaactcatgaatagaatacaacttatcaacttaacataaccatcatcaagt 631780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 10711825 - 10711871
Alignment:
Q  42 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  10711825 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagt 10711871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 10925595 - 10925641
Alignment:
Q  42 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  10925595 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagt 10925641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 13818523 - 13818457
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaact 68  Q
    |||||| |||||||||||||||||||||  |||||  |||||||| |||||||||||||||||||||    
T  13818523 ttcataataataattattcatcaaacatctcattataaattcatggataaaagacaacttatcaact 13818457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 350
Target Start/End: Complemental strand, 33685180 - 33685124
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaac 350  Q
    ||||||||||||| |||||||| ||||||| |||||||||||||| |||||||||||    
T  33685180 aacaataatgttcatacttcttcaactttaataacacttactaatccaaccaacaac 33685124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 349
Target Start/End: Complemental strand, 20900192 - 20900137
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaa 349  Q
    ||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||||    
T  20900192 aacaataatgttcatacttcttcaactttaataacacttattaattcaaccaacaa 20900137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 349
Target Start/End: Original strand, 27027292 - 27027347
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaa 349  Q
    ||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||||    
T  27027292 aacaataatgttcatacttcttcaactttaataacacttattaattcaaccaacaa 27027347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 27532752 - 27532798
Alignment:
Q  42 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||    
T  27532752 tcatgaatagaaggcaacttatcaacttaacataaccatcatcaagt 27532798  T

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Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 14047308 - 14047361
Alignment:
Q  32 cattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 85  Q
    ||||| ||| |||||||||||| |||||||||||||||||||||| ||||||||    
T  14047308 cattaacaactcatgaataaaatacaacttatcaacttaacataatcatcatca 14047361  T

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Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 40906326 - 40906391
Alignment:
Q  9 taataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacat 74  Q
    |||||||| ||||| ||||||| ||||||||| | ||||||| ||||||||||| |||||||||||    
T  40906326 taataattcttcataaaacatttcattagcaacttatgaatagaagacaacttaacaacttaacat 40906391  T

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Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 3336815 - 3336874
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||||||   |||||| ||||||| ||||||||||||||||||||| |||||||    
T  3336815 aacaataatgttcacgcttcttcaactttaataacacttactaattcaaccagcaacgac 3336874  T

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Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 328
Target Start/End: Original strand, 17142574 - 17142608
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaac 328  Q
    |||||||||||||||||||||||||||||||||||    
T  17142574 aacaataatgttcttacttctttaactttagtaac 17142608  T

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Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 4828766 - 4828707
Alignment:
Q  297 aataatgttcttacttct---ttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||| |||||||||||   |||||||||| | ||||||||||||||||||||||||||    
T  4828766 aataatattcttacttctaatttaactttagaatcacttactaattcaaccaacaacgac 4828707  T

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Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 38106801 - 38106866
Alignment:
Q  9 taataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacat 74  Q
    |||||||| ||||| ||||||  ||||||||| |||| |||| ||||||||||| |||||||||||    
T  38106801 taataattcttcataaaacatctcattagcaactcataaatagaagacaacttaacaacttaacat 38106866  T

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Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 4170366 - 4170426
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| ||||||||  |||||| |||| |||||||| ||||||||||||||||    
T  4170366 aacaataatattcatacttcttcgactttaataactcttactaaatcaaccaacaacgaca 4170426  T

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Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 14698091 - 14698151
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| ||||||||  |||||| |||| |||||||| ||||||||||||||||    
T  14698091 aacaataatattcatacttcttcgactttaataactcttactaaatcaaccaacaacgaca 14698151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 22635099 - 22635063
Alignment:
Q  32 cattagcaattcatgaataaaagacaacttatcaact 68  Q
    ||||| |||||||||||||||||||||||||||||||    
T  22635099 cattatcaattcatgaataaaagacaacttatcaact 22635063  T

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Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 31132054 - 31131994
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| ||||||||  |||||| |||| |||||||| ||||||||||||||||    
T  31132054 aacaataatattcatacttcttcgactttaataactcttactaaatcaaccaacaacgaca 31131994  T

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Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 41791042 - 41791102
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| |||||||| || |||| |||| |||||||| ||||||||||||||||    
T  41791042 aacaataatattcatacttcttcaattttaataactcttactaaatcaaccaacaacgaca 41791102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 43258672 - 43258612
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    |||| |||| ||| |||||||| ||||||| ||||||||||||| ||||||||| ||||||    
T  43258672 aacattaatattcatacttcttcaactttaataacacttactaaatcaaccaacgacgaca 43258612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 353
Target Start/End: Original strand, 13877452 - 13877507
Alignment:
Q  298 ataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||| |||||||| || |||| |||||||||||||| ||| ||||||||||    
T  13877452 ataatgttcatacttcttcaattttaataacacttactaatccaatcaacaacgac 13877507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 294 - 349
Target Start/End: Original strand, 13881147 - 13881202
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaa 349  Q
    ||||||||||||| |||||||| || |||| |||||||||||||| ||| ||||||    
T  13881147 aacaataatgttcatacttcttcaattttaataacacttactaatccaatcaacaa 13881202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 352
Target Start/End: Original strand, 28916798 - 28916853
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacga 352  Q
    |||||||||| |||||||| || |||| |||||||||||||| ||| |||||||||    
T  28916798 aataatgttcatacttcttcaattttaataacacttactaatccaatcaacaacga 28916853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 13814014 - 13813969
Alignment:
Q  23 caaacattccattagcaattcatgaataaaagacaacttatcaact 68  Q
    |||||||  ||||||||| ||||||||| |||||||||||||||||    
T  13814014 caaacatctcattagcaactcatgaatagaagacaacttatcaact 13813969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 13818586 - 13818541
Alignment:
Q  23 caaacattccattagcaattcatgaataaaagacaacttatcaact 68  Q
    |||||||  ||||||||| ||||||||| |||||||||||||||||    
T  13818586 caaacatctcattagcaactcatgaatagaagacaacttatcaact 13818541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 53388376 - 53388316
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| |||||||| | |||||  |||||||||||| ||||||||| ||||||    
T  53388376 aacaataatattcatacttcttcatctttaaaaacacttactaaatcaaccaacgacgaca 53388316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 7e-40; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 14764915 - 14764828
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14764915 tttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 14764828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 3801932 - 3802016
Alignment:
Q  4 catattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3801932 cataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 3802016  T

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Target: chr3; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 54519559 - 54519643
Alignment:
Q  4 catattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54519559 cataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 54519643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 23372663 - 23372576
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23372663 tttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataacaatcatcaagt 23372576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 51299492 - 51299579
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  51299492 tttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataacaatcatcaagt 51299579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 13435778 - 13435864
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13435778 ttcataataataattattcatcaaacatttcattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 13435864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 41093 - 41180
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41093 tttcataataataattattcctcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccctcatcaagt 41180  T

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Target: chr3; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 9532217 - 9532304
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9532217 tttcataataataattattcatcaaacattccattaacaattcatgaataaaagacaacttatcaactcaacataaccatcatcaagt 9532304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 10835061 - 10834974
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10835061 tttcataataataattattcatcaaacatttcattagaaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 10834974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 18899409 - 18899499
Alignment:
Q  1 tttcatattaataattattcatcaaacattccatta---gcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18899409 tttcataataataattattcatcaaacattccattattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 18899499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 20249969 - 20249882
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20249969 tttcataataatagttattcatcgaatattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 20249882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 29546058 - 29545971
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  29546058 tttcataataataattattcatcaaaccttccattagcaattcatgactaaaagacaacttatcaacttaacacaaccatcatcaagt 29545971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 12853482 - 12853396
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12853482 ttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 12853396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 16795463 - 16795549
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| ||||||||||||||||||| |  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16795463 ttcataataataattattcatcaaacgtctcattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 16795549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 12304149 - 12304220
Alignment:
Q  17 attcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12304149 attcatcaaacattccatcagcaattcatgaataaaatacaacttatcaacttaacataaccatcatcaagt 12304220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 16326145 - 16326074
Alignment:
Q  17 attcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  16326145 attcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttgacataaccctcatcaagt 16326074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 5219807 - 5219893
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| ||||||||||||||||||| |  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5219807 ttcataataataattattcatcaaacgtctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 5219893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 8928986 - 8928900
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  |||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||    
T  8928986 ttcataataataattattcatcaaacatctcattagcagtccatgaataaaagacaacttatcaacttaacataaccaccatcaagt 8928900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 11301784 - 11301698
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| ||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11301784 ttcataataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 11301698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 19774158 - 19774244
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||    
T  19774158 ttcataataataattattcatcaaacatctcattatcatttcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 19774244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 3802220 - 3802281
Alignment:
Q  292 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3802220 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 3802281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 9532508 - 9532569
Alignment:
Q  292 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9532508 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 9532569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 12304424 - 12304485
Alignment:
Q  292 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12304424 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 12304485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 14764624 - 14764563
Alignment:
Q  292 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14764624 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 14764563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 7108198 - 7108284
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  7108198 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 7108284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 7112133 - 7112219
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  7112133 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 7112219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 11068573 - 11068659
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  11068573 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 11068659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 11167212 - 11167126
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  11167212 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 11167126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 11853666 - 11853752
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| ||||| |||||||||||||||  ||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  11853666 ttcataataatacttattcatcaaacatctcattatcaattcgtgaataaaagacaacttatcaacttaacataaacatcatcaagt 11853752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 18899719 - 18899777
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacga 352  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18899719 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacga 18899777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 22320089 - 22320175
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  22320089 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 22320175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 22335144 - 22335230
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  22335144 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 22335230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 28948421 - 28948507
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  28948421 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 28948507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 55021336 - 55021422
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  55021336 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 55021422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 14664394 - 14664471
Alignment:
Q  11 ataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||||||||||||||  ||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  14664394 ataattattcatcaaacatctcattatcaattcatgaatagaagacaacttatcaacttaacataaacatcatcaagt 14664471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 14667558 - 14667635
Alignment:
Q  11 ataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||||||||||||||  ||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  14667558 ataattattcatcaaacatctcattatcaattcatgaatagaagacaacttatcaacttaacataaacatcatcaagt 14667635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 54519847 - 54519908
Alignment:
Q  292 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  54519847 ttaacaataatgttcttacttctttacctttagtaacacttactaattcaaccaacaacgac 54519908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 294 - 350
Target Start/End: Complemental strand, 10834767 - 10834711
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaac 350  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10834767 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaac 10834711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 20249726 - 20249667
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20249726 aacaataatgttcttacttctttaactttagtaacacttgctaattcaaccaacaacgac 20249667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 30064344 - 30064431
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaac-ttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||| ||||||||  |||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30064344 ttcataataataattattcgtcaaacatctcattattaattcatgaataaaagacaacttatcaactttaacataaccatcatcaagt 30064431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 4108908 - 4108822
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||| ||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  4108908 ttcataataataattattcatcaaatatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 4108822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 4112757 - 4112671
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||| ||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  4112757 ttcataataataattattcatcaaatatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 4112671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 15616137 - 15616223
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||| ||||||    
T  15616137 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcttcaagt 15616223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 23372372 - 23372311
Alignment:
Q  292 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23372372 ttaacaataatgttcttacttcttaatctttagtaacacttactaattcaaccaacaacgac 23372311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 51299783 - 51299844
Alignment:
Q  292 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  51299783 ttaacaataatgttcttacttcttaatctttagtaacacttactaattcaaccaacaacgac 51299844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 17548835 - 17548779
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17548835 aataatgttcctacttctttaactttagtaacacttactaattcaaccaacaacgac 17548779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 38312976 - 38312890
Alignment:
Q  1 tttcatattaataattattcatcaaacattcc-attagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||| ||||||| |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38312976 tttcataataataat-attcatcgaacattcccattagca-ttcatgaataaaagacaacttataaacttaacataaccatcatcaagt 38312890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 1989861 - 1989802
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1989861 aacaataatattcttacttctttaactttattaacacttactaattcaaccaacaacgac 1989802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 14670017 - 14670072
Alignment:
Q  33 attagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14670017 attatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 14670072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 14681541 - 14681596
Alignment:
Q  33 attagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14681541 attatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 14681596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 15963464 - 15963543
Alignment:
Q  9 taataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||| |||||||||||||||  ||||| |||||||||||||||||||||||||| || ||||||||| |||||||||||    
T  15963464 taatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttattaatttaacataaacatcatcaagt 15963543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 15967388 - 15967467
Alignment:
Q  9 taataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||| |||||||||||||||  ||||| |||||||||||||||||||||||||| || ||||||||| |||||||||||    
T  15967388 taatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttattaatttaacataaacatcatcaagt 15967467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 15971312 - 15971391
Alignment:
Q  9 taataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||| |||||||||||||||  ||||| |||||||||||||||||||||||||| || ||||||||| |||||||||||    
T  15971312 taatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttattaatttaacataaacatcatcaagt 15971391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 18933475 - 18933388
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaac-ttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||| ||||||||  |||||  ||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  18933475 ttcataataataattattcgtcaaacatctcattattaattcatgaataaaatacaacttatcaactttaacataaccatcatcaagt 18933388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 29545744 - 29545685
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  29545744 aacaataatgttcttacttctttaactttagtaacacttgctaattcaaccagcaacgac 29545685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 38312713 - 38312654
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  38312713 aacaataatgttcttacttctttaactttagtaacacttgttaattcaaccaacaacgac 38312654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 11912395 - 11912473
Alignment:
Q  10 aataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||||||||||| |||  |||||||||| |||||||||   ||||||||||||||||||||||||||||||||||    
T  11912395 aataattattcatcaaccatctcattagcaatacatgaataaggaacaacttatcaacttaacataaccatcatcaagt 11912473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 14497908 - 14497993
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| ||||||||||||||||| |||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  14497908 ttcataataataattattcatcaa-catctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 14497993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 16752020 - 16751934
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| ||||||||||||||||| |||  ||||| || || |||||||||||| |||||||||||||||||||| |||||||||||    
T  16752020 ttcataataataattattcatcaaccatctcattatcatttgatgaataaaagataacttatcaacttaacataaacatcatcaagt 16751934  T

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Target: chr3; HSP #60
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 297 - 349
Target Start/End: Complemental strand, 13026954 - 13026902
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaa 349  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13026954 aataatattcttacttctttaactttagtaacacttactaattcaaccaacaa 13026902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 34853162 - 34853106
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34853162 aataatattcttacttctttaattttagtaacacttactaattcaaccaacaacgac 34853106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 12337216 - 12337302
Alignment:
Q  2 ttcatattaataattattcatcaaacat-tccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| ||||| ||||||||||||||| || |||| |||||||||||||||||||||| |||||| ||||||||| |||||||||||    
T  12337216 ttcataataatacttattcatcaaacatctcaattatcaattcatgaataaaagacaac-tatcaatttaacataaacatcatcaagt 12337302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 15463868 - 15463924
Alignment:
Q  32 cattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  15463868 cattatcaattcatgaataaaagacaacttatcaacttaacataaacgtcatcaagt 15463924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 4590239 - 4590193
Alignment:
Q  42 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  4590239 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagt 4590193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 8491811 - 8491765
Alignment:
Q  42 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  8491811 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagt 8491765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 17318588 - 17318542
Alignment:
Q  42 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  17318588 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagt 17318542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 15555605 - 15555670
Alignment:
Q  9 taataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacat 74  Q
    |||||||| ||||||||||||  ||||||||| ||||||||| ||||||||||| |||||||||||    
T  15555605 taataattcttcatcaaacatctcattagcaactcatgaatataagacaacttaacaacttaacat 15555670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 16840314 - 16840238
Alignment:
Q  10 aataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaa 86  Q
    |||||||||||| |||  ||  |||||||||| |||||||||   ||||||||||||||||||||||||||||||||    
T  16840314 aataattattcagcaagaatctcattagcaatacatgaataaggaacaacttatcaacttaacataaccatcatcaa 16840238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 23173287 - 23173343
Alignment:
Q  32 cattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||| ||| ||||||||| |||||||||||||||||||||||||| ||||||||||    
T  23173287 cattaacaactcatgaatagaagacaacttatcaacttaacataactatcatcaagt 23173343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 180130 - 180071
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||||||  ||||||| | ||||| |||||||||||||||||||||||||||||    
T  180130 aacaataatgttcacacttcttcagctttaataacacttactaattcaaccaacaacgac 180071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 349
Target Start/End: Complemental strand, 23396627 - 23396572
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaa 349  Q
    ||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||||    
T  23396627 aacaataatgttcatacttcttcaactttaataacacttattaattcaaccaacaa 23396572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 14068141 - 14068097
Alignment:
Q  42 tcatgaataaaagacaacttatcaacttaacataaccatcatcaa 86  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||    
T  14068141 tcatgaatagaagacaacttatcgacttaacataaccatcatcaa 14068097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 15564811 - 15564883
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacat 74  Q
    |||||| |||||||| ||||| ||||||| ||||||||| ||||||| | ||||||||  |||||||||||||    
T  15564811 ttcataataataattcttcataaaacatttcattagcaactcatgaacagaagacaacacatcaacttaacat 15564883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 54972689 - 54972748
Alignment:
Q  295 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    |||||||| ||| |||||||| ||||||| |||| |||||||| ||||||||||||||||    
T  54972689 acaataatattcatacttcttcaactttaataactcttactaaatcaaccaacaacgaca 54972748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 54975299 - 54975358
Alignment:
Q  295 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    |||||||| ||| |||||||| ||||||| |||| |||||||| ||||||||||||||||    
T  54975299 acaataatattcatacttcttcaactttaataactcttactaaatcaaccaacaacgaca 54975358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 54977909 - 54977968
Alignment:
Q  295 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    |||||||| ||| |||||||| ||||||| |||| |||||||| ||||||||||||||||    
T  54977909 acaataatattcatacttcttcaactttaataactcttactaaatcaaccaacaacgaca 54977968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 350
Target Start/End: Original strand, 18958287 - 18958340
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaac 350  Q
    |||||| ||| |||||||| || |||| ||||||||||||||||||||||||||    
T  18958287 aataatattcatacttcttcaattttaataacacttactaattcaaccaacaac 18958340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 55293055 - 55292995
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| |||||||| | |||||| |||||||||||| ||||||||| ||||||    
T  55293055 aacaataatattcatacttcttcatctttagaaacacttactaaatcaaccaacgacgaca 55292995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 7e-40; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 10686366 - 10686279
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10686366 tttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 10686279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 19663677 - 19663590
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19663677 tttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 19663590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 20260216 - 20260303
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20260216 tttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 20260303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 9240633 - 9240720
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9240633 tttcataataataattattcatcaaacattccattagcaattcatgaatagaagacaacttatcaacttaacataaccatcatcaagt 9240720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 6481743 - 6481830
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6481743 tttcataataataattattcatcaaacgttccattagcaattcatgaataaaagacaacctatcaacttaacataaccatcatcaagt 6481830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 6485210 - 6485297
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6485210 tttcataataataattattcatcaaacgttccattagcaattcatgaataaaagacaacctatcaacttaacataaccatcatcaagt 6485297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 37378995 - 37379082
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  37378995 tttcataataataatttttcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccctcatcaagt 37379082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 21074627 - 21074540
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21074627 tttcataataataattattcatcaaacatttttttagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 21074540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 10103415 - 10103329
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  10103415 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 10103329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 12902725 - 12902639
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  12902725 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 12902639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 19663317 - 19663259
Alignment:
Q  295 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19663317 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 19663259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 24630166 - 24630080
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  24630166 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 24630080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 24645111 - 24645197
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  24645111 ttcataataataattattcatcaaacatctcattaccaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 24645197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 24647054 - 24647140
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  24647054 ttcataataataattattcatcaaacatctcattaccaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 24647140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 24647887 - 24647973
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  24647887 ttcataataataattattcatcaaacatctcattaccaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 24647973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 27381112 - 27381026
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  27381112 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 27381026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 27385082 - 27384996
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  27385082 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 27384996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 30346776 - 30346690
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  30346776 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 30346690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 10686118 - 10686057
Alignment:
Q  292 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10686118 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacgacgac 10686057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 20260507 - 20260568
Alignment:
Q  292 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  20260507 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacgacgac 20260568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 26895971 - 26896027
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26895971 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 26896027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 6481986 - 6482045
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6481986 aacaataatgttcttacttctttaactttagtaacacttgctaattcaaccaacaacgac 6482045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 6485453 - 6485512
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6485453 aacaataatgttcttacttctttaactttagtaacacttgctaattcaaccaacaacgac 6485512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 41532554 - 41532475
Alignment:
Q  9 taataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  41532554 taatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaatttaacataaacatcatcaagt 41532475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 6262039 - 6261981
Alignment:
Q  295 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6262039 acaataatgttcttacttctttaactttagtaacagttactaattcaaccaacaacgac 6261981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 27600339 - 27600417
Alignment:
Q  10 aataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  27600339 aataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 27600417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 31343877 - 31343963
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  | ||| |||||||||||||||||||| |||||||||||||||||  |||||||||||    
T  31343877 ttcataataataattattcatcaaacatctctttatcaattcatgaataaaagacagcttatcaacttaacatatacatcatcaagt 31343963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 6478663 - 6478607
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6478663 aataatgttcctacttctttaactttagtaacacttactaattcaaccaacaacgac 6478607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 9783984 - 9784040
Alignment:
Q  32 cattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9783984 cattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 9784040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 9240919 - 9240978
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  9240919 aacaataatgttcttacttctttaactttagtaacacttgctagttcaaccaacaacgac 9240978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 22702738 - 22702794
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22702738 aataatattcttacttctttaactttagtaacacttactaattcaatcaacaacgac 22702794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 23374666 - 23374725
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||| ||||||| |||||||| ||||||| |||||||||||||||||||||||||||||    
T  23374666 aacaaaaatgttcatacttcttcaactttaataacacttactaattcaaccaacaacgac 23374725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 299 - 353
Target Start/End: Complemental strand, 10040572 - 10040518
Alignment:
Q  299 taatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||| ||| |||||||  |||||||||||||||||||||||||||||||||||||    
T  10040572 taatattcatacttctacaactttagtaacacttactaattcaaccaacaacgac 10040518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 309 - 353
Target Start/End: Original strand, 19803523 - 19803567
Alignment:
Q  309 acttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||    
T  19803523 acttcttcaactttaataacacttactaattcaaccaacaacgac 19803567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 310 - 353
Target Start/End: Complemental strand, 24275985 - 24275942
Alignment:
Q  310 cttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||| ||||||| |||||||||||||||||||||||||||||    
T  24275985 cttcttcaactttaataacacttactaattcaaccaacaacgac 24275942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 22109202 - 22109258
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||| |||||||| || |||| |||||||||||||| ||| ||||||||||    
T  22109202 aataatgttcatacttcttcaattttaataacacttactaatccaatcaacaacgac 22109258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 31502927 - 31502987
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| ||||||||  |||||| |||| |||||||| ||||||||||||||||    
T  31502927 aacaataatattcatacttcttcgactttaataactcttactaaatcaaccaacaacgaca 31502987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 31505493 - 31505553
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| ||||||||  |||||| |||| |||||||| ||||||||||||||||    
T  31505493 aacaataatattcatacttcttcgactttaataactcttactaaatcaaccaacaacgaca 31505553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 20591817 - 20591757
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| |||||||| | |||||  |||||||||||| ||||||||| ||||||    
T  20591817 aacaataatattcatacttcttcatctttaaaaacacttactaaatcaaccaacgacgaca 20591757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 28348437 - 28348497
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    |||| |||| ||| |||||||  ||||||| ||||||||||||| ||||||| ||||||||    
T  28348437 aacattaatattcatacttctacaactttaataacacttactaaatcaaccaccaacgaca 28348497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 81; Significance: 5e-38; HSPs: 2)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 162 - 246
Alignment:
Q  4 catattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  162 cataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 429 - 490
Alignment:
Q  292 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  429 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 5e-38; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 8729729 - 8729645
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 85  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8729729 tttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 8729645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 11774255 - 11774342
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11774255 tttcataataataattattcatcaaacattccattaacaattcatgaataaaagacaacttatcaacttaacataaccctcatcaagt 11774342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 363230 - 363314
Alignment:
Q  4 catattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  363230 cataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcatcttaacataaccatcaacaagt 363314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 8415096 - 8415009
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||    
T  8415096 tttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaaaataaccctaatcaagt 8415009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 27942804 - 27942718
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  27942804 ttcataataataattattcatcaaacatttcattagcaattcatgaataaaagacaacttattaacttatcataaccatcatcaagt 27942718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 23427793 - 23427872
Alignment:
Q  9 taataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23427793 taataattattcatcaaacatttcattatcaattcatgaataaaagacaacttatcaacttaacataaccatcattaagt 23427872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 14399204 - 14399125
Alignment:
Q  9 taataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14399204 taatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 14399125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 21409860 - 21409947
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaac-ttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  21409860 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaactttaacataaccatcatcaagt 21409947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 21804352 - 21804439
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaac-ttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  21804352 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaactttaacataaccatcatcaagt 21804439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 44385945 - 44385866
Alignment:
Q  9 taataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  44385945 taataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaagttaacataatcatcatcaagt 44385866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 21829579 - 21829493
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  21829579 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 21829493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 21974302 - 21974216
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  21974302 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 21974216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 43250162 - 43250248
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  43250162 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 43250248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 18864216 - 18864137
Alignment:
Q  9 taataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  18864216 taatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaatttaacataaacatcatcaagt 18864137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 20453899 - 20453958
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20453899 aacaataatgttcttacttctttaactttagtagcacttactaattcaaccaacaacgac 20453958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 21978412 - 21978326
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| ||||||||||||||||||||  |||||||| |||||||||||    
T  21978412 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatataacataaacatcatcaagt 21978326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 22110561 - 22110647
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| |||||||||  ||||||||||    
T  22110561 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaaaatcatcaagt 22110647  T

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Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 44475901 - 44475959
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacga 352  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  44475901 aacaataatgttcttacttctttaactttagtaacacttgctaattcaaccaacaacga 44475959  T

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Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 44479163 - 44479221
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacga 352  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  44479163 aacaataatgttcttacttctttaactttagtaacacttgctaattcaaccaacaacga 44479221  T

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Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 23913255 - 23913311
Alignment:
Q  32 cattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23913255 cattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 23913311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 21862115 - 21862056
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  21862115 aacaataatgttcttacttctttccctttagtaacacttactaattcaaccaacaacgac 21862056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 30941676 - 30941597
Alignment:
Q  9 taataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||| |||||||||||||||  ||||| ||||| ||||||||||||||||||||||| ||||||||| |||||||||||    
T  30941676 taatacttattcatcaaacatctcattatcaatttatgaataaaagacaacttatcaatttaacataaacatcatcaagt 30941597  T

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Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 8729530 - 8729471
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  8729530 aacaataatattcttacttctttaactttagtaacacttgctaattcaatcaacaacgac 8729471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 20459521 - 20459579
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacga 352  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||    
T  20459521 aacaataatgttgttacttctttaactttagtaacacttactaattcaagaaacaacga 20459579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 21328534 - 21328612
Alignment:
Q  10 aataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||||||| ||| |||  |||||||||| |||||||||   ||||||||||||||||||||||||||||||||||    
T  21328534 aataattattcaacaagcatctcattagcaatacatgaataaggaacaacttatcaacttaacataaccatcatcaagt 21328612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 43111685 - 43111744
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||| |||||||| ||||| | |||||||||||||||||||||||||||||    
T  43111685 aacaataatgttcatacttcttcaacttaaataacacttactaattcaaccaacaacgac 43111744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 44431311 - 44431370
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||| |||| ||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  44431311 aacattaatattcatacttcttcaactttagtaacacttactaattcaaccaacaacgac 44431370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 21386159 - 21386205
Alignment:
Q  42 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  21386159 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagt 21386205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 32949394 - 32949452
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacga 352  Q
    |||||||||||||  ||||||| ||||||| ||||||||||||||||||||||||||||    
T  32949394 aacaataatgttcacacttcttcaactttaataacacttactaattcaaccaacaacga 32949452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 28853317 - 28853377
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| |||||||| |||||||||||| |||||||| ||||||||||||||||    
T  28853317 aacaataatattcatacttcttcaactttagtaactcttactaaatcaaccaacaacgaca 28853377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 19881557 - 19881616
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||| |||  ||||||| ||||||| |||||||||||||||||||||||||||||    
T  19881557 aacaataatattcacacttcttcaactttaataacacttactaattcaaccaacaacgac 19881616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 42560992 - 42560917
Alignment:
Q  10 aataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 85  Q
    |||||||||||||||| |||  |||||||||| |||||||||   ||||||| ||||||||||||||||| |||||    
T  42560992 aataattattcatcaaccatctcattagcaatgcatgaataaggaacaacttgtcaacttaacataaccaccatca 42560917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 21968071 - 21968025
Alignment:
Q  42 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||    
T  21968071 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagt 21968025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 21980911 - 21980865
Alignment:
Q  42 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||    
T  21980911 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagt 21980865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 21985894 - 21985848
Alignment:
Q  42 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||    
T  21985894 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagt 21985848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 22000857 - 22000811
Alignment:
Q  42 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||    
T  22000857 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagt 22000811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 38186390 - 38186345
Alignment:
Q  304 ttcttacttctttaactttagtaacacttactaattcaaccaacaa 349  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||    
T  38186390 ttcttacttcattaactttggtaacacttactaattcaaccaacaa 38186345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 22009275 - 22009229
Alignment:
Q  42 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||    
T  22009275 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagt 22009229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 351
Target Start/End: Complemental strand, 365406 - 365349
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacg 351  Q
    ||||||||||||| || ||||| ||||||| || ||||||||||| ||||||||||||    
T  365406 aacaataatgttcatatttcttaaactttaatagcacttactaatccaaccaacaacg 365349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 6609000 - 6608940
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| ||||||||  |||||| |||| |||||||| ||||||||||||||||    
T  6609000 aacaataatattcatacttcttcgactttaataactcttactaaatcaaccaacaacgaca 6608940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 7301899 - 7301839
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||| ||| ||| |||||||| ||||||| |||| |||||||| ||||||||||||||||    
T  7301899 aacaaaaatattcatacttcttcaactttaataactcttactaaatcaaccaacaacgaca 7301839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 45135686 - 45135626
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| ||||||||  |||||| |||| |||||||| ||||||||||||||||    
T  45135686 aacaataatattcatacttcttcgactttaataactcttactaaatcaaccaacaacgaca 45135626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 350
Target Start/End: Complemental strand, 15005147 - 15005093
Alignment:
Q  296 caataatgttcttacttctttaactttagtaacacttactaattcaaccaacaac 350  Q
    ||||||||||| |||||||| || |||| |||||||||||||| ||| |||||||    
T  15005147 caataatgttcatacttcttcaattttaataacacttactaatccaatcaacaac 15005093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 17794749 - 17794809
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| |||||||| | |||||  |||||||||||| ||||||||| ||||||    
T  17794749 aacaataatattcatacttcttcatctttaaaaacacttactaaatcaaccaacgacgaca 17794809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 24708476 - 24708420
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||| ||| |||||||| || |||| |||||||||||||| ||| ||||||||||    
T  24708476 aataatattcatacttcttcaattttaataacacttactaatccaatcaacaacgac 24708420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 80; Significance: 2e-37; HSPs: 3)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 3636 - 3549
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3636 tttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataacaatcatcaagt 3549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 3345 - 3284
Alignment:
Q  292 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  3345 ttaacaataatgttcttacttcttaatctttagtaacacttactaattcaaccaacaacgac 3284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 52 - 1
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaa 52  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  52 tttcataataataattattcatcaaacattccattagcaattcatgaataaa 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 2e-37; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 4475754 - 4475841
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4475754 tttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataacaatcatcaagt 4475841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 12941180 - 12941267
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12941180 tttcataataataattattcatcaaacattccatcagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 12941267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 23955328 - 23955415
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23955328 tttcataataataattattcatcaaacattccattaacaattcatgaataaaagacaacttatcaacttaacataaccctcatcaagt 23955415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 27222791 - 27222878
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27222791 tttcataataatagttattcatcgaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 27222878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 28291014 - 28290927
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28291014 tttcataataataattattcatcaaacattcaattagcaatttatgaataaaagacaacttatcaacttaacataaccatcatcaagt 28290927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 14470841 - 14470927
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  14470841 ttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacctaacataaacatcatcaagt 14470927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 22075509 - 22075423
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| ||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22075509 ttcataataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 22075423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 12941471 - 12941532
Alignment:
Q  292 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12941471 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 12941532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 24266445 - 24266505
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24266445 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 24266505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 31479581 - 31479497
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaa 86  Q
    |||||| |||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||||||||||| |||||||||    
T  31479581 ttcataataataattattcatcaaacatctcattatcatttcatgaataaaagacaacttatcaacttaacataaacatcatcaa 31479497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 8242372 - 8242458
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  8242372 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 8242458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 11565361 - 11565447
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  11565361 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 11565447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 11717059 - 11716973
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  11717059 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 11716973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 12620452 - 12620366
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  12620452 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 12620366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 23351758 - 23351816
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacga 352  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23351758 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacga 23351816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 23537941 - 23538027
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| ||||||| ||||||  |||||||||||||||||||||||||||||||||||    
T  23537941 ttcataataataattattcatcaaacatctcattaacaattcacgaataagggacaacttatcaacttaacataaccatcatcaagt 23538027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 23988263 - 23988349
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||| |||| |||| |||||||||||    
T  23988263 ttcataataataattattcatcaaacatttcattatcaattcattaataaaagacaacttatcaatttaatataaacatcatcaagt 23988349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 27416646 - 27416560
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| ||||| |||||||||||||||  ||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  27416646 ttcataataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacctatcaacttaacataaacatcatcaagt 27416560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 294 - 350
Target Start/End: Original strand, 221392 - 221448
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaac 350  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  221392 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaac 221448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 23400644 - 23400724
Alignment:
Q  9 taataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaac-ttaacataaccatcatcaagt 88  Q
    |||||||||||||||||||||  ||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  23400644 taataattattcatcaaacatctcattatcaattcatgaataaaggacaacttatcaactttaacataaccatcatcaagt 23400724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 23393608 - 23393687
Alignment:
Q  9 taataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  23393608 taatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaatttaacataaacatcatcaagt 23393687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 23413516 - 23413595
Alignment:
Q  9 taataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  23413516 taatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaatttaacataaacatcatcaagt 23413595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 16758675 - 16758761
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  || || |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  16758675 ttcataataataattattcatcaaacatctcactatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 16758761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 22947627 - 22947713
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||  |||||||||||||||||||| ||||||||| |||||||||||    
T  22947627 ttcataataataattattcatcaaacatctcattatcaattcactaataaaagacaacttatcaatttaacataaacatcatcaagt 22947713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 22951583 - 22951669
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||  |||||||||||||||||||| ||||||||| |||||||||||    
T  22951583 ttcataataataattattcatcaaacatctcattatcaattcactaataaaagacaacttatcaatttaacataaacatcatcaagt 22951669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 23870071 - 23870157
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||  |||||||||||||||||||| ||||||||| |||||||||||    
T  23870071 ttcataataataattattcatcaaacatctcattatcaattcactaataaaagacaacttatcaatttaacataaacatcatcaagt 23870157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 23874027 - 23874113
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||  |||||||||||||||||||| ||||||||| |||||||||||    
T  23874027 ttcataataataattattcatcaaacatctcattatcaattcactaataaaagacaacttatcaatttaacataaacatcatcaagt 23874113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 27555500 - 27555585
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| ||||| |||||||||||||||  ||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  27555500 ttcataataatacttattcatcaaacatctcattatcaattcatgaataaaagacaac-tatcaacttaacataaacatcatcaagt 27555585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 4476046 - 4476107
Alignment:
Q  292 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  4476046 ttaacaataatgttcttacttcttaatctttagtaacacttactaattcaaccaacaacgac 4476107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 19869160 - 19869233
Alignment:
Q  15 ttattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||||||||||  ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  19869160 ttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaatttaacataaacatcatcaagt 19869233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 29848976 - 29848920
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  29848976 aataatgtttttacttctttaactttagtaacacttactaattcaaccaacaacgac 29848920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 13763617 - 13763676
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  13763617 aacaataatgttcttacttctttaactttagcaacacttactaatttaaccaacaacgac 13763676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 28290771 - 28290712
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  28290771 aacaataatgttcttacttctttaactttagtaacgcttgctaattcaaccaacaacgac 28290712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 22861715 - 22861801
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| | |||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| ||||| |||||    
T  22861715 ttcataatcataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcaccaagt 22861801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 16133929 - 16133873
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  16133929 aataatgttcctacttctttaactttagtaacacttattaattcaaccaacaacgac 16133873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 29417373 - 29417317
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29417373 aataatattcttacttctttaattttagtaacacttactaattcaaccaacaacgac 29417317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 1254127 - 1254205
Alignment:
Q  10 aataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||||||||||| |||  ||||| |||| |||||||||   ||||||||||||||||||||||||||||||||||    
T  1254127 aataattattcatcaaccatctcattaacaatacatgaataaggaacaacttatcaacttaacataaccatcatcaagt 1254205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 34297883 - 34297805
Alignment:
Q  10 aataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||||||||||| |||  |||||||||| |||||||||   |||||||||||||||||||||||||||| |||||    
T  34297883 aataattattcatcaaccatctcattagcaatacatgaataaggaacaacttatcaacttaacataaccatcagcaagt 34297805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 297 - 350
Target Start/End: Complemental strand, 19444605 - 19444552
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaac 350  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  19444605 aataatcttcctacttctttaactttagtaacacttactaattcaaccaacaac 19444552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 16622797 - 16622881
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| | ||||| |||||||||||||  ||||| || |||||||||||||||  ||||||||||||||||||| |||||||||||    
T  16622797 ttcataatgataatcattcatcaaacatctcattatcatttcatgaataaaaga--acttatcaacttaacataaacatcatcaagt 16622881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 2076276 - 2076330
Alignment:
Q  32 cattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaa 86  Q
    ||||| |||||||||||||||| |||||||||||||||||||||| |||||||||    
T  2076276 cattatcaattcatgaataaaaaacaacttatcaacttaacataatcatcatcaa 2076330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 18918659 - 18918613
Alignment:
Q  42 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  18918659 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagt 18918613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 25737862 - 25737938
Alignment:
Q  12 taattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||||| ||| |||  |||||||||| |||||||||  ||||||||||||||||| ||||| |||||||||||    
T  25737862 taattattcagcaagcatctcattagcaatacatgaataagggacaacttatcaacttagcataatcatcatcaagt 25737938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 18953562 - 18953516
Alignment:
Q  42 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||||||    
T  18953562 tcatgaatagaagacaacttatcgacttaacataatcatcatcaagt 18953516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 2288620 - 2288560
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| |||||||| | |||||| |||||||||||| ||||||||| ||||||    
T  2288620 aacaataatattcatacttcttcatctttagaaacacttactaaatcaaccaacgacgaca 2288560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 23537887 - 23537923
Alignment:
Q  32 cattagcaattcatgaataaaagacaacttatcaact 68  Q
    ||||||||||||||||||||||||||||||| |||||    
T  23537887 cattagcaattcatgaataaaagacaacttagcaact 23537923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 23621683 - 23621627
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||| |||||||| || |||| |||||||||||||| ||| ||||||||||    
T  23621683 aataatgttcatacttcttcaattttaataacacttactaatccaatcaacaacgac 23621627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 350
Target Start/End: Complemental strand, 8717496 - 8717444
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaac 350  Q
    |||||| ||| |||||||| || |||| ||||||||||||||||||||||||||    
T  8717496 aataatattcatacttcttcaa-tttaataacacttactaattcaaccaacaac 8717444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 15538629 - 15538689
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| |||||||| | |||||  |||||||||||| ||||||||| ||||||    
T  15538629 aacaataatattcatacttcttcatctttaaaaacacttactaaatcaaccaacgacgaca 15538689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 15686898 - 15686838
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| |||||||| | |||||| |||||||||||| |||| |||| ||||||    
T  15686898 aacaataatattcatacttcttcatctttagaaacacttactaaatcaatcaacgacgaca 15686838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 2e-37; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 32649026 - 32649113
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32649026 tttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataacaatcatcaagt 32649113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 29533847 - 29533931
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaa 86  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29533847 ttcataataataattattcatcaaacatttcattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaa 29533931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 16370884 - 16370971
Alignment:
Q  1 tttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16370884 tttcataataatagttattcatcgaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 16370971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 20439269 - 20439188
Alignment:
Q  4 catattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 85  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20439269 cataataataattattcatcaaacattccattagcaatacatgaataaaagacaacttatcaacttaacataaccatcatca 20439188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 22132217 - 22132131
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22132217 ttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 22132131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 33795993 - 33796079
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33795993 ttcataataataattattcatcaaacatatcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 33796079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 19209253 - 19209312
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19209253 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 19209312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 20230258 - 20230171
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaac-ttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  |||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  20230258 ttcataataataattattcatcaaacatctcattattaattcatgaataaaagacaacttatcaactttaacataaccatcatcaagt 20230171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 28311850 - 28311909
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28311850 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 28311909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 1009222 - 1009308
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  1009222 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 1009308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 1926914 - 1926828
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  1926914 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 1926828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 16376934 - 16376848
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  16376934 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 16376848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 20925928 - 20925842
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  20925928 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 20925842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 16371127 - 16371187
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16371127 aacaataatgttcttacttctttaactttagtaacacttgctaattcaaccaacaacgaca 16371187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 41389783 - 41389697
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| ||||||||||||||||| |||  ||||| || ||||||||||||| |||||||||||||||||||||| |||||||||||    
T  41389783 ttcataataataattattcatcaaccatctcattatcatttcatgaataaaaaacaacttatcaacttaacataaacatcatcaagt 41389697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 13529171 - 13529115
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13529171 aataatgttcctacttctttaactttagtaacacttactaattcaaccaacaacgac 13529115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 41801367 - 41801311
Alignment:
Q  32 cattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41801367 cattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 41801311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 20439073 - 20439014
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  20439073 aacaataatgttctaacttctttaactttagtaacacttgctaattcaaccaacaacgac 20439014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 39245287 - 39245203
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| || ||||||||||||||  |||||||||||||||||||| |||||||||||    
T  39245287 ttcataataataattattcatcaaacatctcattatcatttcatgaataaaag--aacttatcaacttaacataaacatcatcaagt 39245203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 39248842 - 39248758
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| || ||||||||||||||  |||||||||||||||||||| |||||||||||    
T  39248842 ttcataataataattattcatcaaacatctcattatcatttcatgaataaaag--aacttatcaacttaacataaacatcatcaagt 39248758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 52634228 - 52634314
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| ||||||| | |||||||||| ||||||||| |||||||||||    
T  52634228 ttcataataataattattcatcaaacatctcattatcaattcattaataaaaaataacttatcaatttaacataaacatcatcaagt 52634314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 29534179 - 29534235
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29534179 aataatattcttacttctttaactttagtaacacttactaattaaaccaacaacgac 29534235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 32649529 - 32649585
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  32649529 aataatattcttaattctttaattttagtaacacttactaattcaaccaacaacgac 32649585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 16400393 - 16400452
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||||||| ||||||| ||||||| || ||||||||||||||||||||||||||    
T  16400393 aacaataatgttctcacttcttcaactttaatagcacttactaattcaaccaacaacgac 16400452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 21406253 - 21406299
Alignment:
Q  42 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  21406253 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagt 21406299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 349
Target Start/End: Original strand, 18251856 - 18251911
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaa 349  Q
    ||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||||    
T  18251856 aacaataatgttcatacttcttcaactttaataacacttattaattcaaccaacaa 18251911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 349
Target Start/End: Original strand, 18269859 - 18269914
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaa 349  Q
    ||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||||    
T  18269859 aacaataatgttcatacttcttcaactttaataacacttattaattcaaccaacaa 18269914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 349
Target Start/End: Original strand, 18274537 - 18274592
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaa 349  Q
    ||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||||    
T  18274537 aacaataatgttcatacttcttcaactttaataacacttattaattcaaccaacaa 18274592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 28205016 - 28204957
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||| |||||||| || |||| |||||||||||||| ||||||||||||||    
T  28205016 aacaataatgttcatacttcttcaaatttaataacacttactaatccaaccaacaacgac 28204957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 20578831 - 20578891
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| |||||||| ||||||| |||| |||||||| ||||||||||||||||    
T  20578831 aacaataatattcatacttcttcaactttaataactcttactaaatcaaccaacaacgaca 20578891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 20586524 - 20586584
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| |||||||| ||||||| |||| |||||||| ||||||||||||||||    
T  20586524 aacaataatattcatacttcttcaactttaataactcttactaaatcaaccaacaacgaca 20586584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 349
Target Start/End: Original strand, 20900680 - 20900735
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaa 349  Q
    ||||||||||||| ||| |||| ||||||| ||||||||| |||||||||||||||    
T  20900680 aacaataatgttcatacctcttcaactttaataacacttattaattcaaccaacaa 20900735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 343
Target Start/End: Complemental strand, 16397674 - 16397625
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaac 343  Q
    ||||||||||||| |||||||| ||||||| || ||||||||||||||||    
T  16397674 aacaataatgttcatacttcttcaactttaatagcacttactaattcaac 16397625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 293531 - 293591
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    |||| |||| ||| |||||||| ||||||| ||||||||||||| ||||||||| ||||||    
T  293531 aacattaatattcatacttcttcaactttaataacacttactaaatcaaccaacgacgaca 293591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 349
Target Start/End: Complemental strand, 21181870 - 21181818
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaa 349  Q
    ||||||||||  ||||||| ||||||| |||||||||||| ||||||||||||    
T  21181870 aataatgttcaaacttcttcaactttaataacacttactatttcaaccaacaa 21181818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 45306662 - 45306721
Alignment:
Q  295 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    |||||||| ||  |||||||| ||||||| |||| |||||||| ||||||||||||||||    
T  45306662 acaataatatttatacttcttcaactttaataactcttactaaatcaaccaacaacgaca 45306721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0842 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 5209 - 5288
Alignment:
Q  9 taataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5209 taataattattcatcaaacattccattagcatttcatgaataatagacaacttatcaacttaacataaccatcatcaagt 5288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 72; Significance: 1e-32; HSPs: 3)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 37651 - 37568
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 85  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  37651 ttcataataataattattcatcaaacattccattagcaatacatgaataaaagacaacgtatcaacttaacataaccatcatca 37568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 25686 - 25600
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25686 ttcataataataattattcatcaaacatcacattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 25600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 37453 - 37394
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  37453 aacaataatgttcttacttctttaactttagtaacacttgttaattcaaccaacaacgac 37394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 33897 - 33983
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33897 ttcataataataattattcatcaaacatctcattagcaattcatgaataaaagacaacttatcaacttaacataacgatcatcaagt 33983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 28468 - 28518
Alignment:
Q  38 caattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28468 caattcatgaataaaagacaacttatcaacttaacataacgatcatcaagt 28518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 14804 - 14890
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14804 ttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 14890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 8851 - 8775
Alignment:
Q  9 taataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 85  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8851 taataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 8775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 939 - 853
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| ||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  939 ttcataataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 5649 - 5563
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| ||| |||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5649 ttcataataacaattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 5563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 11601 - 11541
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| |||||||| ||||||| |||| |||||||| ||||||||||| ||||    
T  11601 aacaataatattcatacttcttcaactttaataactcttactaaatcaaccaacaatgaca 11541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 18794 - 18869
Alignment:
Q  13 aattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||||||||||||  ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18794 aattattcatcaaacatctcattatcaattcatgaataaatgacaacttatcaacttaacataaccatcatcaagt 18869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 20968 - 21027
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20968 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 21027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 11178 - 11095
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 85  Q
    |||||| || ||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11178 ttcataatattaattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatca 11095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 11011 - 11097
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  11011 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 11097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 60444 - 60358
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  60444 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 60358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 70715 - 70801
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| ||||| |||||||||||||||  ||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  70715 ttcataataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacctatcaacttaacataaacatcatcaagt 70801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 137279 - 137338
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||| |||| ||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  137279 aacattaatattcatacttcttcaactttagtaacacttactaattcaaccaacaacgac 137338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 294 - 350
Target Start/End: Complemental strand, 4489 - 4433
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaac 350  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4489 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaac 4433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 2406 - 2465
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2406 aacaataatgttcttacttctttaactttagaaacacttactaattcaaccaacaacgac 2465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 15686 - 15607
Alignment:
Q  9 taataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  15686 taatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaatttaacataaacatcatcaagt 15607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 32531 - 32591
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| ||||||||  |||||| |||| |||||||| ||||||||||||||||    
T  32531 aacaataatattcatacttcttcgactttaataactcttactaaatcaaccaacaacgaca 32591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 34246 - 34160
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||| | |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  34246 ttcataataataattattcatcaaacatctcatcatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 34160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 68674 - 68588
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| || ||||||||    
T  68674 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacaccatcaagt 68588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 11737 - 11823
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| ||||| |||||||||||||||  ||||| ||||||||| |||||||||||| |||||||||||||||| |||||||||||    
T  11737 ttcataataatacttattcatcaaacatctcattatcaattcatgtataaaagacaacatatcaacttaacataagcatcatcaagt 11823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 7049 - 6993
Alignment:
Q  32 cattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7049 cattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 6993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 41593 - 41537
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  41593 aataatgttcctacttctttaactttagtaacacttactaattcaaccaacaacgac 41537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 145780 - 145836
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  145780 aataatattcttacttctttaactttagtaacacttactaattcaaccaacaacgac 145836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 74420 - 74364
Alignment:
Q  32 cattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  74420 cattagcaactcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 74364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 8544 - 8623
Alignment:
Q  9 taataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||| |||||||||||||  ||||| || ||||||||||||||||||||||| |||||||||||| |||||||||||    
T  8544 taataatcattcatcaaacatctcattatcatttcatgaataaaagacaacttattaacttaacataaacatcatcaagt 8623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 297 - 352
Target Start/End: Complemental strand, 942 - 887
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacga 352  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  942 aataattttcttacttctttaactttagtaacacttactaattcaaccaacaacga 887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 4089 - 4167
Alignment:
Q  10 aataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||||||||||| |||  |||||||||| |||||||||   ||||||||||||||||||||||||||||||||||    
T  4089 aataattattcatcaaccatctcattagcaatacatgaataaggaacaacttatcaacttaacataaccatcatcaagt 4167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 294 - 348
Target Start/End: Original strand, 1558 - 1612
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaaca 348  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1558 aacaataatgttcttacttctttaactttagtaacacttgctaattcaaccaaca 1612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 5785 - 5871
Alignment:
Q  2 ttcatattaataattattcatcaaacat-tccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| ||||| ||||||||||||| | || |||| |||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  5785 ttcataataatacttattcatcaaacgtctcaattatcaattcatgaataaaagacaac-tatcaacttaacataaacatcatcaagt 5871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 50454 - 50513
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||    
T  50454 aacaataatgttcacacttcttcaactttagtaacacttactaattcaaccaacaacgac 50513  T

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Target: scaffold0031 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 37282 - 37235
Alignment:
Q  41 ttcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37282 ttcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 37235  T

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Target: scaffold0447 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 299 - 353
Target Start/End: Original strand, 13666 - 13720
Alignment:
Q  299 taatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  13666 taatgttcatacttcttcaactttagtaacacttactaattcaaccaacaacgac 13720  T

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Target: scaffold0383 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 299 - 353
Target Start/End: Original strand, 11661 - 11715
Alignment:
Q  299 taatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  11661 taatgttcatacttcttcaactttagtaacacttactaattcaaccaacaacgac 11715  T

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Target: scaffold0372 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 6438 - 6353
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||| ||||| ||||||||||| |||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  6438 ttcataataatagttattcatcaa-catctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 6353  T

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Target: scaffold0970 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 3752 - 3800
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaacca 345  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3752 aataatgttcctacttctttaactttagtaacacttactaattcaacca 3800  T

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Target: scaffold0200 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 10765 - 10813
Alignment:
Q  40 attcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10765 attcatgaataaaatacaacttatcaacttaacataaccatcatcaagt 10813  T

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Target: scaffold0825 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 2208 - 2149
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||| || ||||| ||||||| |||||||||||||||||||||||||||||    
T  2208 aacaataatgttcataattcttcaactttaataacacttactaattcaaccaacaacgac 2149  T

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Target: scaffold0034 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 35323 - 35264
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||| |||||||| ||||||| |||||||||||||| ||||||||||||||    
T  35323 aacaataatgttcatacttcttcaactttaataacacttactaatccaaccaacaacgac 35264  T

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Target: scaffold0380 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 3974 - 4020
Alignment:
Q  42 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  3974 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagt 4020  T

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Target: scaffold0139 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 24016 - 23970
Alignment:
Q  42 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  24016 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagt 23970  T

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Target: scaffold0029 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 62918 - 62872
Alignment:
Q  42 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  62918 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagt 62872  T

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Target: scaffold0002 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 115455 - 115390
Alignment:
Q  10 aataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataa 76  Q
    |||| |||||||||||||||  ||||| |||||||||||||||||||||| ||||||||||||||||    
T  115455 aatacttattcatcaaacatctcattatcaattcatgaataaaagacaac-tatcaacttaacataa 115390  T

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Target: scaffold0635 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 299 - 353
Target Start/End: Original strand, 6498 - 6552
Alignment:
Q  299 taatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||| ||| |||||||  |||||||||||||||||||||||||||||||||||||    
T  6498 taatattcatacttctacaactttagtaacacttactaattcaaccaacaacgac 6552  T

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Target: scaffold0109 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 37276 - 37230
Alignment:
Q  42 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  37276 tcatgaatagaagacaacttatcgacttaacataaccatcatcaagt 37230  T

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Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 309 - 353
Target Start/End: Original strand, 59012 - 59056
Alignment:
Q  309 acttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||    
T  59012 acttcttcaactttaataacacttactaattcaaccaacaacgac 59056  T

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Target: scaffold0066 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 350
Target Start/End: Original strand, 47934 - 47987
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaac 350  Q
    |||||| ||||||||||||||||||||  | |||||||||||| ||||||||||    
T  47934 aataatattcttacttctttaactttaaaatcacttactaatttaaccaacaac 47987  T

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Target: scaffold0413 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 10316 - 10352
Alignment:
Q  317 aactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||| |||||||||||||||||||||||||    
T  10316 aactttagtaatacttactaattcaaccaacaacgac 10352  T

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Target: scaffold0151 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 1753 - 1809
Alignment:
Q  297 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    |||||||||| || ||||| ||||||| || ||||||||||| ||||||||||||||    
T  1753 aataatgttcatatttcttaaactttaatagcacttactaatccaaccaacaacgac 1809  T

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Target: scaffold0107 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 2524 - 2584
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    |||| |||| ||| |||||||| ||||||| ||||||||||||| ||||||||| ||||||    
T  2524 aacattaatattcatacttcttcaactttaataacacttactaaatcaaccaacgacgaca 2584  T

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Target: scaffold0049 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 82281 - 82221
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    ||||||||| ||| ||||||||  |||||| |||| |||||||| ||||||||||||||||    
T  82281 aacaataatattcatacttcttcgactttaataactcttactaaatcaaccaacaacgaca 82221  T

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Target: scaffold0044 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 6435 - 6375
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgaca 354  Q
    |||||| || ||| |||||||| ||||||| ||||||||||||| ||||||||| ||||||    
T  6435 aacaatgatattcatacttcttcaactttaataacacttactaaatcaaccaacgacgaca 6375  T

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Target: scaffold0500 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 12136 - 12077
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||| ||||| |||||||| || |||| |||||||||||||| ||| ||||||||||    
T  12136 aacaatactgttcatacttcttcaattttaataacacttactaatccaatcaacaacgac 12077  T

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Target: scaffold0381 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 14395 - 14336
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||| ||||| |||||||| || |||| |||||||||||||| ||| ||||||||||    
T  14395 aacaatactgttcatacttcttcaattttaataacacttactaatccaatcaacaacgac 14336  T

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Target: scaffold0278 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 22572 - 22513
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||| || ||||| ||||||| || || |||||||| ||||||||||||||    
T  22572 aacaataatgttcatatttcttaaactttaatagcatttactaatccaaccaacaacgac 22513  T

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Target: scaffold0058 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 40724 - 40665
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 353  Q
    ||||||||||||| || ||||| ||||||| || |||||||||||  |||||||||||||    
T  40724 aacaataatgttcatatttcttcaactttaatagcacttactaatctaaccaacaacgac 40665  T

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Target: scaffold0556 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 9162 - 9220
Alignment:
Q  294 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacga 352  Q
    ||||||||||||| |||| ||| || |||| |||||||||||||| |||| ||||||||    
T  9162 aacaataatgttcatactccttcaattttaataacacttactaatccaactaacaacga 9220  T

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Target: scaffold0293 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 62
Target Start/End: Complemental strand, 21420 - 21390
Alignment:
Q  32 cattagcaattcatgaataaaagacaactta 62  Q
    |||||||||||||||||||||||||||||||    
T  21420 cattagcaattcatgaataaaagacaactta 21390  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 163678 - 163600
Alignment:
Q  10 aataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 88  Q
    |||||||||||| ||| |||  ||||| |||  |||||||||   |||| ||||||||||||||||||| |||||||||    
T  163678 aataattattcagcaagcatctcattaccaaaacatgaataaggaacaagttatcaacttaacataaccctcatcaagt 163600  T

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Target: scaffold1873 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold1873
Description:

Target: scaffold1873; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 651 - 700
Alignment:
Q  2 ttcatattaataattattcatcaaacattccattagcaattcatgaataa 51  Q
    |||||| |||||||||||||||||||||  ||||| ||||||||| ||||    
T  651 ttcataataataattattcatcaaacatctcattatcaattcatggataa 700  T

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Target: scaffold1873; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 68
Target Start/End: Original strand, 605 - 633
Alignment:
Q  40 attcatgaataaaagacaacttatcaact 68  Q
    |||||||||||||||||||||||||||||    
T  605 attcatgaataaaagacaacttatcaact 633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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