View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21685_high_22 (Length: 333)

Name: NF21685_high_22
Description: NF21685
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21685_high_22
NF21685_high_22
[»] chr7 (1 HSPs)
chr7 (30-320)||(48167482-48167772)


Alignment Details
Target: chr7 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 30 - 320
Target Start/End: Complemental strand, 48167772 - 48167482
Alignment:
Q  30 aacttggcattactcatgtactctggatccatgtaacctatagttcctctaacatcagtaaaaaccttgctctcttccatgcccatcatccttgacaatc 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48167772 aacttggcattactcatgtactctggatccatgtaacctatagttcctctaacatcagtaaaaaccttgctctcttccatgcccatcatccttgacaatc 48167673  T
Q  130 caaaatccgacagtttggcttcatatttctcagtcaaaagaatgtttgtaagctaaacaataaaatcaatacaaggcattaagaaaacattttctaatca 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48167672 caaaatccgacagtttggcttcatatttctcagtcaaaagaatgtttgtaagctaaacaataaaatcaatacaaggcattaagaaaacattttctaatca 48167573  T
Q  230 ttcccaattaagtgcagaatccattccagattaacttcatcacacttaccttgatatctctatggacaacacaaccctctatatgatgatg 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48167572 ttcccaattaagtgcagaatccattccagattaacttcatcacacttaccttgatatctctatggacaacacaaccctctatatgatgatg 48167482  T

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