View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21685_high_3 (Length: 499)

Name: NF21685_high_3
Description: NF21685
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21685_high_3
NF21685_high_3
[»] chr8 (55 HSPs)
chr8 (325-489)||(36119403-36119567)
chr8 (127-312)||(43599303-43599489)
chr8 (127-313)||(10989167-10989354)
chr8 (127-314)||(15010955-15011143)
chr8 (122-313)||(33435670-33435860)
chr8 (189-313)||(8559572-8559696)
chr8 (188-312)||(33435875-33435999)
chr8 (189-313)||(20760649-20760773)
chr8 (216-314)||(12941560-12941658)
chr8 (200-310)||(35561660-35561770)
chr8 (188-306)||(36039782-36039900)
chr8 (189-313)||(30176453-30176577)
chr8 (188-312)||(40902381-40902505)
chr8 (195-313)||(36037185-36037299)
chr8 (189-312)||(10989023-10989146)
chr8 (248-307)||(30117484-30117543)
chr8 (233-312)||(43901050-43901129)
chr8 (208-314)||(18313774-18313880)
chr8 (189-312)||(22451336-22451463)
chr8 (189-314)||(16454624-16454749)
chr8 (198-311)||(42228764-42228877)
chr8 (189-312)||(15010810-15010934)
chr8 (233-312)||(5720900-5720979)
chr8 (127-276)||(35561486-35561637)
chr8 (208-297)||(26122752-26122841)
chr8 (189-291)||(3183900-3184002)
chr8 (195-296)||(34248085-34248186)
chr8 (233-313)||(15968097-15968179)
chr8 (189-296)||(18905864-18905971)
chr8 (233-312)||(45122303-45122381)
chr8 (215-312)||(4195965-4196063)
chr8 (242-312)||(25186764-25186834)
chr8 (267-312)||(8559745-8559790)
chr8 (195-296)||(34248367-34248468)
chr8 (189-274)||(36997196-36997281)
chr8 (233-304)||(3895131-3895202)
chr8 (253-312)||(8559852-8559910)
chr8 (233-312)||(15968461-15968540)
chr8 (189-296)||(32931409-32931516)
chr8 (236-306)||(8056273-8056343)
chr8 (247-312)||(5496553-5496618)
chr8 (189-313)||(15856964-15857089)
chr8 (267-312)||(15857171-15857216)
chr8 (195-311)||(8056482-8056598)
chr8 (272-312)||(43599510-43599550)
chr8 (233-312)||(3895372-3895450)
chr8 (189-296)||(21085137-21085244)
chr8 (189-296)||(21653335-21653442)
chr8 (189-296)||(21653812-21653919)
chr8 (189-264)||(22277564-22277639)
chr8 (228-311)||(37537123-37537206)
chr8 (189-296)||(43984305-43984412)
chr8 (266-312)||(30065983-30066029)
chr8 (195-296)||(23027823-23027924)
chr8 (208-312)||(39124916-39125020)
[»] chr7 (77 HSPs)
chr7 (127-314)||(9378783-9378971)
chr7 (127-313)||(13310351-13310538)
chr7 (127-312)||(23396601-23396787)
chr7 (127-313)||(40703785-40703972)
chr7 (188-312)||(6783030-6783154)
chr7 (189-312)||(33855683-33855806)
chr7 (163-306)||(31374763-31374907)
chr7 (215-312)||(9378992-9379089)
chr7 (189-312)||(23821665-23821788)
chr7 (197-312)||(35866636-35866751)
chr7 (163-312)||(16564886-16565036)
chr7 (163-312)||(16600626-16600776)
chr7 (196-314)||(39808593-39808711)
chr7 (189-310)||(6813067-6813188)
chr7 (218-314)||(6782816-6782912)
chr7 (234-313)||(6751743-6751822)
chr7 (233-312)||(16565090-16565169)
chr7 (233-312)||(16600493-16600572)
chr7 (233-312)||(31357708-31357787)
chr7 (234-312)||(6751539-6751617)
chr7 (218-312)||(29252568-29252662)
chr7 (187-296)||(1661178-1661287)
chr7 (195-312)||(40703647-40703764)
chr7 (233-313)||(33833941-33834021)
chr7 (137-312)||(38948350-38948525)
chr7 (127-312)||(6813211-6813395)
chr7 (233-312)||(22841044-22841123)
chr7 (247-313)||(5775873-5775939)
chr7 (216-312)||(2179646-2179743)
chr7 (248-312)||(48113989-48114053)
chr7 (163-312)||(258423-258571)
chr7 (233-312)||(4258033-4258112)
chr7 (163-305)||(8681883-8682026)
chr7 (233-312)||(33834147-33834226)
chr7 (155-308)||(43565960-43566113)
chr7 (255-312)||(23390582-23390639)
chr7 (244-312)||(33855473-33855541)
chr7 (195-307)||(36621019-36621130)
chr7 (244-312)||(43366399-43366467)
chr7 (257-312)||(4258261-4258316)
chr7 (237-312)||(10903314-10903389)
chr7 (237-312)||(10903521-10903596)
chr7 (189-304)||(23396814-23396929)
chr7 (202-312)||(5266351-5266461)
chr7 (247-304)||(47856038-47856095)
chr7 (189-296)||(1663593-1663701)
chr7 (189-312)||(2232087-2232211)
chr7 (195-275)||(29780176-29780256)
chr7 (209-313)||(36237793-36237897)
chr7 (208-296)||(37272053-37272141)
chr7 (195-290)||(7135238-7135333)
chr7 (269-312)||(23821540-23821583)
chr7 (267-321)||(6214302-6214356)
chr7 (233-290)||(29645829-29645886)
chr7 (196-289)||(39808460-39808553)
chr7 (199-296)||(43384279-43384376)
chr7 (253-313)||(21557007-21557067)
chr7 (208-296)||(27585264-27585352)
chr7 (188-264)||(28910072-28910148)
chr7 (208-312)||(40137704-40137808)
chr7 (189-296)||(12578449-12578556)
chr7 (198-305)||(24426752-24426858)
chr7 (233-312)||(29646056-29646135)
chr7 (195-290)||(43288278-43288373)
chr7 (195-290)||(43288546-43288641)
chr7 (234-312)||(30768410-30768488)
chr7 (202-296)||(34748786-34748880)
chr7 (195-296)||(257262-257363)
chr7 (214-295)||(14691081-14691162)
chr7 (195-268)||(40703406-40703479)
chr7 (195-271)||(12518165-12518241)
chr7 (188-276)||(34590556-34590644)
chr7 (200-296)||(36092599-36092695)
chr7 (188-288)||(43167881-43167981)
chr7 (208-296)||(43383954-43384042)
chr7 (195-271)||(48116291-48116367)
chr7 (246-290)||(49040580-49040624)
[»] chr5 (71 HSPs)
chr5 (137-316)||(18914304-18914484)
chr5 (127-313)||(13413575-13413761)
chr5 (127-312)||(38376723-38376909)
chr5 (127-313)||(20720476-20720663)
chr5 (137-306)||(40168977-40169147)
chr5 (127-312)||(43490389-43490575)
chr5 (127-310)||(3015549-3015731)
chr5 (188-312)||(18914149-18914273)
chr5 (127-305)||(34457095-34457274)
chr5 (195-312)||(28358030-28358147)
chr5 (188-304)||(35526976-35527092)
chr5 (189-312)||(3015406-3015529)
chr5 (189-312)||(34457295-34457418)
chr5 (189-314)||(3762896-3763021)
chr5 (127-313)||(48237-48422)
chr5 (189-312)||(24125054-24125177)
chr5 (188-313)||(35527262-35527388)
chr5 (195-312)||(48099-48216)
chr5 (195-312)||(2908557-2908674)
chr5 (217-312)||(43490273-43490368)
chr5 (137-312)||(2908705-2908881)
chr5 (127-312)||(28156028-28156211)
chr5 (233-313)||(39268009-39268089)
chr5 (189-312)||(15287045-15287168)
chr5 (254-312)||(18107532-18107590)
chr5 (208-310)||(30330643-30330745)
chr5 (233-312)||(36878318-36878397)
chr5 (189-296)||(38131772-38131879)
chr5 (198-312)||(18107825-18107939)
chr5 (244-310)||(32501205-32501271)
chr5 (187-312)||(11632423-11632548)
chr5 (199-312)||(37656731-37656844)
chr5 (199-312)||(37781843-37781956)
chr5 (208-312)||(395359-395463)
chr5 (208-312)||(39268218-39268322)
chr5 (163-312)||(36307885-36308034)
chr5 (215-312)||(22732752-22732849)
chr5 (188-296)||(13844021-13844129)
chr5 (188-312)||(28156231-28156354)
chr5 (233-312)||(10668352-10668431)
chr5 (234-304)||(17135519-17135589)
chr5 (233-311)||(18873227-18873305)
chr5 (233-314)||(4563724-4563805)
chr5 (247-312)||(17130036-17130096)
chr5 (195-296)||(29432420-29432521)
chr5 (195-296)||(37995629-37995730)
chr5 (137-224)||(35527114-35527202)
chr5 (189-296)||(873685-873792)
chr5 (189-296)||(1028082-1028189)
chr5 (233-312)||(5127946-5128025)
chr5 (198-312)||(2716538-2716652)
chr5 (189-312)||(4296654-4296779)
chr5 (271-312)||(13413782-13413823)
chr5 (255-312)||(29008064-29008121)
chr5 (189-290)||(40168848-40168949)
chr5 (208-296)||(22196561-22196649)
chr5 (188-264)||(24994109-24994185)
chr5 (258-306)||(35527199-35527247)
chr5 (195-275)||(38663276-38663356)
chr5 (189-296)||(13843705-13843812)
chr5 (189-271)||(12965235-12965317)
chr5 (195-312)||(15286845-15286963)
chr5 (233-307)||(30870918-30870992)
chr5 (208-285)||(1892098-1892175)
chr5 (165-226)||(6918927-6918988)
chr5 (165-226)||(6919174-6919235)
chr5 (195-264)||(24918201-24918270)
chr5 (248-312)||(1893780-1893844)
chr5 (198-310)||(2716337-2716449)
chr5 (202-262)||(24792124-24792184)
chr5 (233-305)||(40961748-40961820)
[»] chr6 (49 HSPs)
chr6 (127-312)||(16876936-16877122)
chr6 (188-312)||(28149785-28149909)
chr6 (189-312)||(26098746-26098869)
chr6 (189-312)||(15102613-15102737)
chr6 (189-312)||(15102743-15102863)
chr6 (189-312)||(25999015-25999138)
chr6 (189-312)||(11313371-11313494)
chr6 (189-312)||(15101100-15101223)
chr6 (189-312)||(16590176-16590299)
chr6 (189-312)||(16605081-16605204)
chr6 (189-312)||(26098334-26098457)
chr6 (168-312)||(26098540-26098685)
chr6 (127-312)||(11316835-11317019)
chr6 (253-312)||(11317040-11317099)
chr6 (189-312)||(25998809-25998932)
chr6 (189-290)||(5269262-5269363)
chr6 (195-312)||(24558575-24558692)
chr6 (189-305)||(19291907-19292023)
chr6 (188-312)||(24558780-24558904)
chr6 (189-296)||(10418327-10418434)
chr6 (183-296)||(12134466-12134579)
chr6 (189-306)||(16876819-16876936)
chr6 (163-287)||(19712571-19712696)
chr6 (218-314)||(6623443-6623539)
chr6 (253-309)||(30526832-30526889)
chr6 (253-309)||(30539415-30539471)
chr6 (189-296)||(19054501-19054608)
chr6 (189-312)||(19712393-19712516)
chr6 (233-312)||(26394543-26394622)
chr6 (189-296)||(30539243-30539350)
chr6 (195-313)||(15293869-15293987)
chr6 (127-220)||(18494407-18494501)
chr6 (220-305)||(2902819-2902902)
chr6 (195-296)||(8144025-8144126)
chr6 (195-296)||(10733433-10733534)
chr6 (189-296)||(1744831-1744938)
chr6 (189-296)||(24055098-24055205)
chr6 (210-312)||(18494284-18494386)
chr6 (253-296)||(31926-31969)
chr6 (218-289)||(25184018-25184089)
chr6 (266-312)||(12124760-12124806)
chr6 (189-263)||(17147894-17147968)
chr6 (195-249)||(22911485-22911539)
chr6 (255-312)||(2923011-2923068)
chr6 (189-290)||(17096687-17096788)
chr6 (195-296)||(28072467-28072568)
chr6 (263-312)||(30527034-30527083)
chr6 (195-271)||(27914321-27914397)
chr6 (233-312)||(29742469-29742546)
[»] chr4 (91 HSPs)
chr4 (127-312)||(12016817-12017003)
chr4 (127-312)||(17077072-17077256)
chr4 (198-312)||(28245985-28246099)
chr4 (127-313)||(28245782-28245964)
chr4 (189-312)||(17076929-17077052)
chr4 (189-313)||(43943664-43943788)
chr4 (189-312)||(25753594-25753717)
chr4 (189-312)||(27634315-27634438)
chr4 (140-312)||(5488359-5488532)
chr4 (189-312)||(12016672-12016795)
chr4 (189-314)||(28395168-28395292)
chr4 (188-312)||(29113441-29113565)
chr4 (189-312)||(21498523-21498646)
chr4 (189-312)||(53863897-53864020)
chr4 (189-312)||(54210369-54210492)
chr4 (163-312)||(56511289-56511439)
chr4 (207-311)||(3055776-3055880)
chr4 (208-312)||(28497222-28497326)
chr4 (189-312)||(1922980-1923103)
chr4 (189-312)||(8559960-8560083)
chr4 (127-312)||(33629651-33629835)
chr4 (215-312)||(39110899-39110996)
chr4 (173-296)||(990555-990679)
chr4 (233-312)||(8304988-8305067)
chr4 (233-312)||(23350791-23350870)
chr4 (189-312)||(56511496-56511619)
chr4 (218-312)||(49380898-49380992)
chr4 (247-308)||(33629917-33629978)
chr4 (163-298)||(10390437-10390573)
chr4 (189-313)||(22865761-22865884)
chr4 (205-305)||(52827237-52827337)
chr4 (189-296)||(991212-991319)
chr4 (237-312)||(47491883-47491958)
chr4 (189-290)||(23018484-23018585)
chr4 (236-312)||(3640198-3640274)
chr4 (195-298)||(7892646-7892750)
chr4 (127-226)||(27634457-27634557)
chr4 (188-296)||(29669351-29669459)
chr4 (190-290)||(45426926-45427026)
chr4 (198-312)||(26806503-26806615)
chr4 (127-245)||(35399342-35399461)
chr4 (208-307)||(50307273-50307372)
chr4 (189-296)||(51469489-51469596)
chr4 (189-296)||(52214623-52214730)
chr4 (189-264)||(53386101-53386176)
chr4 (189-296)||(53740190-53740297)
chr4 (247-313)||(42312821-42312887)
chr4 (234-312)||(45684208-45684286)
chr4 (218-300)||(49380664-49380746)
chr4 (271-312)||(33629596-33629637)
chr4 (271-312)||(33629855-33629896)
chr4 (188-296)||(15665161-15665269)
chr4 (208-304)||(20093332-20093428)
chr4 (208-312)||(33797117-33797221)
chr4 (233-312)||(3640448-3640527)
chr4 (188-271)||(27048125-27048208)
chr4 (189-296)||(29669667-29669774)
chr4 (189-296)||(51470491-51470598)
chr4 (190-268)||(400373-400451)
chr4 (208-290)||(5212009-5212091)
chr4 (202-312)||(14945135-14945245)
chr4 (244-310)||(20441500-20441566)
chr4 (190-296)||(43972363-43972469)
chr4 (218-303)||(7806413-7806497)
chr4 (237-290)||(9758318-9758371)
chr4 (189-274)||(45427241-45427326)
chr4 (235-296)||(52810660-52810721)
chr4 (195-296)||(56509617-56509718)
chr4 (189-296)||(34205982-34206090)
chr4 (208-312)||(39110709-39110813)
chr4 (243-283)||(40197229-40197269)
chr4 (189-296)||(13254391-13254498)
chr4 (233-288)||(14115524-14115579)
chr4 (197-296)||(21497680-21497779)
chr4 (197-296)||(21498195-21498294)
chr4 (233-312)||(21647614-21647693)
chr4 (189-296)||(27048397-27048504)
chr4 (196-290)||(34206251-34206346)
chr4 (208-311)||(35565072-35565174)
chr4 (189-296)||(36558455-36558562)
chr4 (253-312)||(53559358-53559417)
chr4 (233-312)||(53720703-53720782)
chr4 (189-296)||(53738197-53738304)
chr4 (216-290)||(4645866-4645940)
chr4 (189-263)||(6778665-6778739)
chr4 (190-240)||(39910406-39910456)
chr4 (199-312)||(5065845-5065958)
chr4 (248-297)||(7198034-7198083)
chr4 (127-188)||(21498441-21498502)
chr4 (168-287)||(9938466-9938586)
chr4 (244-296)||(37288913-37288965)
[»] chr3 (85 HSPs)
chr3 (141-312)||(39078711-39078883)
chr3 (128-318)||(9264427-9264618)
chr3 (128-312)||(4191049-4191234)
chr3 (127-313)||(51642561-51642749)
chr3 (127-312)||(9264219-9264405)
chr3 (127-312)||(37058697-37058883)
chr3 (188-312)||(50692518-50692642)
chr3 (189-310)||(49477528-49477649)
chr3 (137-312)||(22407584-22407760)
chr3 (189-313)||(40230628-40230752)
chr3 (138-312)||(50692315-50692486)
chr3 (189-312)||(9264075-9264198)
chr3 (127-313)||(37223566-37223753)
chr3 (189-312)||(40230424-40230546)
chr3 (137-312)||(53640108-53640284)
chr3 (189-312)||(22339733-22339856)
chr3 (127-305)||(39956600-39956779)
chr3 (215-312)||(54495523-54495620)
chr3 (189-313)||(4029633-4029757)
chr3 (188-312)||(54591453-54591577)
chr3 (127-290)||(10758934-10759098)
chr3 (189-312)||(25627909-25628033)
chr3 (188-312)||(35011856-35011980)
chr3 (208-312)||(51338449-51338553)
chr3 (163-313)||(35011648-35011799)
chr3 (189-312)||(51642417-51642540)
chr3 (233-314)||(32034081-32034162)
chr3 (127-282)||(49477349-49477505)
chr3 (188-312)||(50338370-50338494)
chr3 (212-312)||(53639977-53640077)
chr3 (189-305)||(33909619-33909733)
chr3 (195-312)||(35015477-35015594)
chr3 (189-290)||(50203846-50203947)
chr3 (189-305)||(19820517-19820632)
chr3 (218-290)||(32215548-32215620)
chr3 (189-312)||(10758757-10758880)
chr3 (187-302)||(11414366-11414480)
chr3 (190-312)||(38421977-38422097)
chr3 (189-312)||(39956456-39956579)
chr3 (233-312)||(40926446-40926525)
chr3 (189-296)||(43101360-43101467)
chr3 (188-298)||(44461055-44461165)
chr3 (234-316)||(53761432-53761514)
chr3 (195-312)||(42258902-42259019)
chr3 (195-296)||(44145116-44145217)
chr3 (189-305)||(12800089-12800205)
chr3 (208-312)||(44145403-44145506)
chr3 (189-296)||(4256242-4256349)
chr3 (189-312)||(22407430-22407553)
chr3 (233-312)||(25578714-25578792)
chr3 (189-304)||(26366731-26366846)
chr3 (189-304)||(29763685-29763799)
chr3 (234-305)||(34992868-34992939)
chr3 (233-312)||(35358486-35358565)
chr3 (237-308)||(40927026-40927097)
chr3 (237-312)||(47702461-47702536)
chr3 (233-307)||(26926904-26926978)
chr3 (266-312)||(29369793-29369839)
chr3 (189-286)||(16078852-16078949)
chr3 (195-312)||(21832686-21832803)
chr3 (237-306)||(39269498-39269567)
chr3 (244-313)||(42637791-42637860)
chr3 (248-312)||(5440569-5440633)
chr3 (237-305)||(34992576-34992644)
chr3 (189-312)||(21832188-21832311)
chr3 (233-312)||(40926695-40926774)
chr3 (189-296)||(54369047-54369154)
chr3 (242-312)||(26915108-26915178)
chr3 (253-307)||(42604905-42604959)
chr3 (188-274)||(44573966-44574052)
chr3 (188-312)||(21833516-21833640)
chr3 (197-296)||(24539161-24539261)
chr3 (237-313)||(39018827-39018903)
chr3 (189-312)||(51836290-51836411)
chr3 (197-296)||(3985781-3985880)
chr3 (189-296)||(21750483-21750590)
chr3 (189-296)||(34715444-34715551)
chr3 (247-310)||(42311207-42311270)
chr3 (189-264)||(44573679-44573754)
chr3 (195-290)||(46139246-46139341)
chr3 (195-296)||(13769286-13769387)
chr3 (215-296)||(27219337-27219418)
chr3 (233-290)||(37040016-37040073)
chr3 (208-296)||(14170007-14170095)
chr3 (208-296)||(44573334-44573422)
[»] chr2 (72 HSPs)
chr2 (127-313)||(3435412-3435599)
chr2 (127-313)||(12431889-12432076)
chr2 (127-312)||(33985901-33986087)
chr2 (137-312)||(29684003-29684179)
chr2 (195-312)||(17727396-17727513)
chr2 (188-313)||(20998977-20999102)
chr2 (208-312)||(883609-883713)
chr2 (125-305)||(29101749-29101931)
chr2 (215-312)||(884049-884146)
chr2 (187-312)||(32667175-32667300)
chr2 (188-312)||(16006969-16007093)
chr2 (201-312)||(27545117-27545228)
chr2 (189-312)||(34775349-34775472)
chr2 (127-307)||(883847-884028)
chr2 (188-312)||(33985759-33985881)
chr2 (189-312)||(12432097-12432220)
chr2 (189-312)||(25621274-25621397)
chr2 (189-312)||(31761124-31761247)
chr2 (210-312)||(19860029-19860131)
chr2 (189-290)||(6183355-6183456)
chr2 (208-313)||(39386661-39386766)
chr2 (196-312)||(32666969-32667085)
chr2 (233-312)||(6986449-6986528)
chr2 (246-313)||(12419829-12419896)
chr2 (189-312)||(40009966-40010089)
chr2 (234-312)||(29695373-29695451)
chr2 (208-313)||(7257616-7257721)
chr2 (189-312)||(8044534-8044658)
chr2 (189-296)||(3976460-3976567)
chr2 (242-313)||(19859916-19859987)
chr2 (215-312)||(29676286-29676383)
chr2 (188-296)||(18901852-18901960)
chr2 (218-312)||(10570927-10571021)
chr2 (233-307)||(26847276-26847349)
chr2 (242-307)||(4721846-4721911)
chr2 (195-271)||(10429772-10429848)
chr2 (196-276)||(10536925-10537005)
chr2 (208-312)||(10542071-10542175)
chr2 (248-312)||(22447297-22447361)
chr2 (195-283)||(33277548-33277636)
chr2 (189-296)||(42768323-42768428)
chr2 (189-296)||(3976992-3977099)
chr2 (188-239)||(15820100-15820151)
chr2 (189-296)||(23054334-23054441)
chr2 (189-296)||(43195792-43195899)
chr2 (210-296)||(7877852-7877938)
chr2 (195-273)||(10849486-10849564)
chr2 (190-312)||(29684211-29684333)
chr2 (163-312)||(39108080-39108230)
chr2 (253-314)||(14127240-14127301)
chr2 (220-313)||(18607273-18607366)
chr2 (189-274)||(21214190-21214275)
chr2 (247-312)||(21734408-21734473)
chr2 (220-276)||(10485222-10485278)
chr2 (127-218)||(29695471-29695563)
chr2 (189-261)||(39108398-39108470)
chr2 (197-296)||(25286257-25286356)
chr2 (201-312)||(28895519-28895629)
chr2 (218-289)||(32810894-32810965)
chr2 (185-296)||(43169250-43169361)
chr2 (266-312)||(10485170-10485216)
chr2 (234-304)||(17265009-17265079)
chr2 (189-247)||(37812272-37812330)
chr2 (198-304)||(38760315-38760421)
chr2 (189-247)||(39108277-39108335)
chr2 (195-296)||(11969060-11969161)
chr2 (188-240)||(5424770-5424822)
chr2 (233-285)||(6986376-6986428)
chr2 (152-262)||(7257088-7257200)
chr2 (188-312)||(13839247-13839371)
chr2 (208-296)||(21213893-21213981)
chr2 (182-226)||(22447178-22447222)
[»] chr1 (81 HSPs)
chr1 (127-312)||(29273151-29273337)
chr1 (127-312)||(39649010-39649196)
chr1 (137-304)||(43361693-43361861)
chr1 (189-312)||(1233918-1234041)
chr1 (189-307)||(41812647-41812765)
chr1 (127-290)||(15391833-15391997)
chr1 (127-313)||(21428192-21428380)
chr1 (189-312)||(52846838-52846961)
chr1 (189-315)||(5222683-5222809)
chr1 (190-312)||(15392017-15392139)
chr1 (189-312)||(21428047-21428170)
chr1 (189-304)||(43361541-43361656)
chr1 (195-312)||(22892683-22892800)
chr1 (189-312)||(24382349-24382472)
chr1 (189-312)||(48558310-48558433)
chr1 (163-312)||(38871117-38871267)
chr1 (188-312)||(2997044-2997168)
chr1 (189-313)||(13959393-13959517)
chr1 (233-312)||(29413340-29413419)
chr1 (233-312)||(52921500-52921579)
chr1 (195-312)||(21538929-21539046)
chr1 (195-304)||(33342273-33342382)
chr1 (189-313)||(11018845-11018969)
chr1 (233-305)||(22826778-22826850)
chr1 (228-312)||(39648906-39648989)
chr1 (189-296)||(2697320-2697427)
chr1 (189-312)||(9380892-9381015)
chr1 (189-296)||(17419795-17419902)
chr1 (127-245)||(29272992-29273111)
chr1 (137-226)||(5325069-5325159)
chr1 (168-312)||(2997228-2997373)
chr1 (189-296)||(4022114-4022221)
chr1 (254-313)||(45395543-45395602)
chr1 (242-312)||(24382193-24382263)
chr1 (218-312)||(49142674-49142767)
chr1 (208-312)||(25799112-25799217)
chr1 (208-296)||(38474291-38474379)
chr1 (189-312)||(38870938-38871062)
chr1 (189-296)||(8520082-8520189)
chr1 (234-313)||(11590411-11590490)
chr1 (189-284)||(15013545-15013640)
chr1 (217-312)||(20428991-20429086)
chr1 (253-312)||(29265910-29265969)
chr1 (195-290)||(40664224-40664319)
chr1 (195-290)||(43423293-43423388)
chr1 (189-271)||(21638255-21638337)
chr1 (234-312)||(24382602-24382680)
chr1 (248-310)||(29413136-29413198)
chr1 (195-276)||(24131876-24131957)
chr1 (267-312)||(39648827-39648872)
chr1 (127-251)||(46098530-46098655)
chr1 (253-310)||(49828665-49828722)
chr1 (233-313)||(11581746-11581826)
chr1 (208-296)||(20735763-20735851)
chr1 (208-312)||(28119750-28119854)
chr1 (248-312)||(42845069-42845133)
chr1 (248-312)||(45982174-45982238)
chr1 (233-312)||(47377827-47377909)
chr1 (189-304)||(9381099-9381214)
chr1 (234-305)||(15391747-15391818)
chr1 (189-296)||(31305719-31305826)
chr1 (253-312)||(36332303-36332362)
chr1 (233-312)||(47086310-47086389)
chr1 (218-312)||(49895345-49895437)
chr1 (189-275)||(12233312-12233398)
chr1 (274-312)||(22892495-22892533)
chr1 (195-289)||(27957804-27957898)
chr1 (253-312)||(36331907-36331962)
chr1 (267-312)||(12314570-12314615)
chr1 (259-312)||(18374517-18374570)
chr1 (189-274)||(20735552-20735637)
chr1 (195-268)||(22892428-22892501)
chr1 (189-274)||(33879767-33879852)
chr1 (189-274)||(33964403-33964488)
chr1 (248-300)||(10017376-10017428)
chr1 (127-226)||(12314449-12314549)
chr1 (195-290)||(13356911-13357007)
chr1 (208-296)||(19937051-19937139)
chr1 (248-312)||(20429283-20429347)
chr1 (195-275)||(35024242-35024322)
chr1 (208-296)||(45858663-45858751)
[»] scaffold0434 (2 HSPs)
scaffold0434 (127-312)||(13298-13484)
scaffold0434 (189-312)||(13505-13628)
[»] scaffold0029 (1 HSPs)
scaffold0029 (189-305)||(76851-76967)
[»] scaffold0989 (1 HSPs)
scaffold0989 (189-311)||(2936-3058)
[»] scaffold0054 (2 HSPs)
scaffold0054 (189-312)||(21252-21376)
scaffold0054 (195-249)||(11338-11392)
[»] scaffold1138 (1 HSPs)
scaffold1138 (189-305)||(1862-1978)
[»] scaffold0060 (2 HSPs)
scaffold0060 (189-312)||(13621-13744)
scaffold0060 (247-311)||(59518-59579)
[»] scaffold0419 (1 HSPs)
scaffold0419 (189-264)||(4228-4303)
[»] scaffold0339 (1 HSPs)
scaffold0339 (244-313)||(15696-15765)
[»] scaffold0166 (1 HSPs)
scaffold0166 (202-262)||(34507-34567)


Alignment Details
Target: chr8 (Bit Score: 161; Significance: 1e-85; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 325 - 489
Target Start/End: Complemental strand, 36119567 - 36119403
Alignment:
Q  325 tcatgaaacgtgctataatgtggacagaattggaactatgaactcacctgtcaacattttctgctaggtaagtaaaataactgcaaaatgcagaaatatt 424  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  36119567 tcatgaaacgtgctataatgtggacagaattggaactatgaactcacctgtcaacattttctgctaggtaagtataataactgcaaaatgcagaaatatt 36119468  T
Q  425 aatagaaatctaaatcattacttttaaaatgttgtgtacattgaacaaagcattctccatctctg 489  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36119467 aatagaaatctaaatcattacttttaaaatgttgtgtacattgaacaaagcattctccatctctg 36119403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 127 - 312
Target Start/End: Complemental strand, 43599489 - 43599303
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| |||||||  | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  43599489 ctcttttggcttggtgcgtgaataggtttaggtggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 43599390  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||||| ||||||| |||||||||||||    
T  43599389 ggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgagtttttcccaata 43599303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 127 - 313
Target Start/End: Original strand, 10989167 - 10989354
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || ||| |||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  10989167 ctctttgggcttgatgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 10989266  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    |  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| |||||||||||||| |||||||    
T  10989267 ggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggttttttccaataa 10989354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 127 - 314
Target Start/End: Original strand, 15010955 - 15011143
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || ||||||||||||||  ||||||| | |||| ||||||| ||| ||| ||||| ||||| |||||||||  | |||||| |||||||||||    
T  15010955 ctctttgggcttggtgcgtgaatagatttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcttaactcatccttacaaaacc 15011054  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaa 314  Q
    |  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| |||||||||||||| ||||||||    
T  15011055 ggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggttttttccaataaa 15011143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 122 - 313
Target Start/End: Complemental strand, 33435860 - 33435670
Alignment:
Q  122 tagcgctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttaca 220  Q
    |||| |||||| || ||||||||||||| |||  |||  | |||| ||||||| ||| | | ||||| ||||| |||||||||||| |||||| ||||||    
T  33435860 tagcactctttgggcttggtgcgtgaatcagt--aggtggcccttgaattcgacaagctatgataccatgttgaaatttggggtctaactcatccttaca 33435763  T
Q  221 aaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    ||||||| ||| ||| |||| |||||||||||| |||||||||| ||||||||| | |||||||||||||  |||||| ||||||||||||||    
T  33435762 aaaccgacttgtaagatgaggattgtctcctttatataaactcttatcaagagttttatctatccgatgtgagacttgagtttttcccaataa 33435670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 189 - 313
Target Start/End: Complemental strand, 8559696 - 8559572
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||||||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| |||||||||||    
T  8559696 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgat 8559597  T
Q  289 gtaggacttgggtttttcccaataa 313  Q
    || ||||||||||||||||||||||    
T  8559596 gtgggacttgggtttttcccaataa 8559572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 188 - 312
Target Start/End: Complemental strand, 33435999 - 33435875
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    |||||| |||||  ||||| ||||||  |||||||||||  ||| |||||||| |||||||||||| |||||||||| ||||||||||| ||||||||||    
T  33435999 ctgttgaaatttaaggtctaactcatctttacaaaaccggcttgtaaggtgaggattgtctcctttatataaactcttatcaagagtcttatctatccga 33435900  T
Q  288 tgtaggacttgggtttttcccaata 312  Q
    ||| |||||||||||||||||||||    
T  33435899 tgtgggacttgggtttttcccaata 33435875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 189 - 313
Target Start/End: Original strand, 20760649 - 20760773
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| |||||||||||| |||| |||||||| |||| ||| | ||||||||||||  ||||||||||  ||||||||||    
T  20760649 tgttgaaatttggggcctaactcatccttacaaaaccggtttgtaaggtgaggattgcctcatctttataaactcttctcaagagtcttgtctatccgat 20760748  T
Q  289 gtaggacttgggtttttcccaataa 313  Q
    || ||||||||||||||||||||||    
T  20760749 gtgggacttgggtttttcccaataa 20760773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 216 - 314
Target Start/End: Complemental strand, 12941658 - 12941560
Alignment:
Q  216 ttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaa 314  Q
    |||||||||||| |||||| ||||| | |  ||||||||||||||||||||||| |||||||||||||| ||||| | |||||||||||||||||||||    
T  12941658 ttacaaaaccgacttgcaaagtgagtagtacctcctttttataaactctcatcatgagtctcatctatctgatgtggtacttgggtttttcccaataaa 12941560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 200 - 310
Target Start/End: Complemental strand, 35561770 - 35561660
Alignment:
Q  200 ggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgg 299  Q
    ||||||| |||||| ||||||||||||   ||||||||||| |||| ||||| ||||||||||||  |||||| ||| ||||||||||||| ||||||||    
T  35561770 ggggtctaactcatccttacaaaaccggcatgcaaggtgaggattgcctcctctttataaactcttctcaagaatcttatctatccgatgtgggacttgg 35561671  T
Q  300 gtttttcccaa 310  Q
    |||||||||||    
T  35561670 gtttttcccaa 35561660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 188 - 306
Target Start/End: Original strand, 36039782 - 36039900
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    |||||| |||||||||||| |||||| ||||||||||||  |||  ||||||| | ||  |||| |||||||||||||||||||||||||||||||||||    
T  36039782 ctgttgaaatttggggtctaactcatccttacaaaaccggcttgtgaggtgagtagtgcatcctctttataaactctcatcaagagtctcatctatccga 36039881  T
Q  288 tgtaggacttgggtttttc 306  Q
    |||  || |||||||||||    
T  36039882 tgtgagatttgggtttttc 36039900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 189 - 313
Target Start/End: Original strand, 30176453 - 30176577
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||| |||| || |||||| ||||||||||||  |||  ||||||  | || ||||| ||||||||||||||||||||||||| ||||||||||    
T  30176453 tgttgaaattcggggcctaactcatccttacaaaaccggcttgtgaggtgaagagtgcctcctctttataaactctcatcaagagtctcgtctatccgat 30176552  T
Q  289 gtaggacttgggtttttcccaataa 313  Q
    || ||||||| ||||||||||||||    
T  30176553 gtgggacttgagtttttcccaataa 30176577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 188 - 312
Target Start/End: Original strand, 40902381 - 40902505
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    |||||| ||||||||| || ||| || ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||    
T  40902381 ctgttgaaatttggggcctaacttatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccga 40902480  T
Q  288 tgtaggacttgggtttttcccaata 312  Q
    ||| | |||||||||||||||||||    
T  40902481 tgtggaacttgggtttttcccaata 40902505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 195 - 313
Target Start/End: Complemental strand, 36037299 - 36037185
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    |||||||||||| |||||| ||||||||||||  |||  ||||||| | ||  |||| |||||||||||||||||||||||||||||||||||||| |||    
T  36037299 aatttggggtctaactcatccttacaaaaccggcttgtgaggtgaggagtgcatcctctttataaactctcatcaagagtctcatctatccgatgtggga 36037200  T
Q  295 cttgggtttttcccaataa 313  Q
    |    ||||||||||||||    
T  36037199 c----gtttttcccaataa 36037185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 10989023 - 10989146
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||| | |||    
T  10989023 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctacctgat 10989122  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||||||||||| ||||||    
T  10989123 gtgggacttgggttttttccaata 10989146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 307
Target Start/End: Original strand, 30117484 - 30117543
Alignment:
Q  248 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 307  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30117484 tcctctttataaactctcatcaagagtctcatctatccgatgtgggacttgggtttttcc 30117543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 43901050 - 43901129
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| |||||||||| | |||||||||| ||||||||||| ||||||||||||| |||| ||||||||||||||||    
T  43901050 aaggtgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggtttttcccaata 43901129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 208 - 314
Target Start/End: Complemental strand, 18313880 - 18313774
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 307  Q
    |||||| ||||||||||| | ||| |||||||| |||| ||||| | |||||||| | | ||||||||| ||||||||||||| |||||||| |||||||    
T  18313880 actcatccttacaaaacctacttgaaaggtgaggattgcctcctctatataaacttttaacaagagtcttatctatccgatgtgggacttggatttttcc 18313781  T
Q  308 caataaa 314  Q
    |||||||    
T  18313780 caataaa 18313774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 189 - 312
Target Start/End: Complemental strand, 22451463 - 22451336
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaa----gagtctcatctatc 284  Q
    ||||| |||||||||  | |||||| ||||||||||||  |||  ||||||||| |||||||| |||||||| |||||||||    ||||||| ||||||    
T  22451463 tgttgaaatttggggcataactcatccttacaaaaccggcttgtgaggtgagaagtgtctcctctttataaattctcatcaatcaagagtctcgtctatc 22451364  T
Q  285 cgatgtaggacttgggtttttcccaata 312  Q
    |||||||||||||  |||||||||||||    
T  22451363 cgatgtaggacttaagtttttcccaata 22451336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 314
Target Start/End: Original strand, 16454624 - 16454749
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  | |||||||| |||||||||||    
T  16454624 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttcttaagagtcttatctatccgat 16454723  T
Q  289 gtaggacttgggtttttcccaataaa 314  Q
    ||  ||||||| ||||| ||||||||    
T  16454724 gtgagacttggtttttttccaataaa 16454749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 198 - 311
Target Start/End: Complemental strand, 42228877 - 42228764
Alignment:
Q  198 ttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 297  Q
    ||||||||| |||||| ||||||||| ||  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| ||||||    
T  42228877 ttggggtctaactcatccttacaaaatcggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggactt 42228778  T
Q  298 gggtttttcccaat 311  Q
     | |||||||||||    
T  42228777 agatttttcccaat 42228764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 15010810 - 15010934
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| |||| |||||||  ||| |||||||| |||| ||||| |||||||| |||  ||||||||||  ||||||||||    
T  15010810 tgttgaaatttggggcctaactcatccttataaaaccggcttgtaaggtgaggattgcctcctctttataaattcttctcaagagtcttgtctatccgat 15010909  T
Q  289 gtaggactt-gggtttttcccaata 312  Q
    || |||||| |||||||||||||||    
T  15010910 gtgggacttggggtttttcccaata 15010934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 5720900 - 5720979
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||||| |||||||| ||||||||||||    
T  5720900 aaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttggatttttcccaata 5720979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 127 - 276
Target Start/End: Complemental strand, 35561637 - 35561486
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtc-tgactcattcttacaaaac 224  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| | | |||||| ||||||||||    
T  35561637 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttgggggcctaactcatccttacaaaac 35561538  T
Q  225 cgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtct 276  Q
    ||  || ||||||||| |||  ||||| ||||||||||||  ||||||||||    
T  35561537 cggcttacaaggtgaggattacctcctctttataaactcttctcaagagtct 35561486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 208 - 297
Target Start/End: Original strand, 26122752 - 26122841
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 297  Q
    |||||| |||| |||||| | ||| || ||||| ||||  |||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  26122752 actcatccttataaaaccaacttgtaatgtgaggattgcatcctctttataaactctcatcaagagtctcatctatccgatgtgggactt 26122841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 3183900 - 3184002
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || ||||||  |||||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||  |||||||||||    
T  3183900 tgttgaaatttggggcctaactcatcgttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcctatctatccgat 3183999  T
Q  289 gta 291  Q
    |||    
T  3184000 gta 3184002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 296
Target Start/End: Complemental strand, 34248186 - 34248085
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||| ||||||||||  ||||| ||||||| |||    
T  34248186 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccgatgtggga 34248087  T
Q  295 ct 296  Q
    ||    
T  34248086 ct 34248085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 313
Target Start/End: Original strand, 15968097 - 15968179
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt--aggacttgggtttttcccaataa 313  Q
    |||||||| |||||||||||| |||||||||| ||||||||||| ||| ||| |||||   |||| |||||||||||||||||    
T  15968097 aaggtgaggattgtctcctttatataaactcttatcaagagtcttatcaatctgatgtgggggacatgggtttttcccaataa 15968179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 18905971 - 18905864
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||||||    
T  18905971 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgat 18905872  T
Q  289 gtaggact 296  Q
    || |||||    
T  18905871 gtgggact 18905864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 45122381 - 45122303
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| |||||||| | |||||| |||||  |||||||||| ||||||| ||||| |||||||||||||||||||||    
T  45122381 aaggtgaggattgtctc-tctttatatactcttctcaagagtcttatctatcagatgtgggacttgggtttttcccaata 45122303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 215 - 312
Target Start/End: Original strand, 4195965 - 4196063
Alignment:
Q  215 cttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt-gggtttttcccaata 312  Q
    ||||||||||||  ||| |||||||| |||| ||||| || |||||||||  ||||||||||  |||||||||||| || ||| |||||||||||||||    
T  4195965 cttacaaaaccggcttgtaaggtgaggattgcctcctcttgataaactcttctcaagagtcttgtctatccgatgtgggccttggggtttttcccaata 4196063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 25186834 - 25186764
Alignment:
Q  242 attgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||||| | |||||||| | ||||||||||| ||||||||||||| |||||| ||||||| ||||||    
T  25186834 attgtctcctctatataaacttttatcaagagtcttatctatccgatgtgggacttaggttttttccaata 25186764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 312
Target Start/End: Original strand, 8559745 - 8559790
Alignment:
Q  267 tcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||    
T  8559745 tcaagagtcttatctatccgatgtgggacttgggtttttcccaata 8559790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 296
Target Start/End: Complemental strand, 34248468 - 34248367
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||| ||||||||||  ||||| || |||| |||    
T  34248468 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccaatgtggga 34248369  T
Q  295 ct 296  Q
    ||    
T  34248368 ct 34248367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 36997281 - 36997196
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagt 274  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||| |||||||||    
T  36997281 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagt 36997196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 233 - 304
Target Start/End: Complemental strand, 3895202 - 3895131
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttt 304  Q
    |||||||| |||| ||||| | |||||||||| ||||||||||| ||||||||||| |||||| || |||||    
T  3895202 aaggtgaggattgcctcctctatataaactcttatcaagagtcttatctatccgatataggacatgagtttt 3895131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 253 - 312
Target Start/End: Original strand, 8559852 - 8559910
Alignment:
Q  253 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||| |||||  |||||||||| ||||||||||||| |||||||||||||||||||||    
T  8559852 tttatatactcttctcaagagtct-atctatccgatgtgggacttgggtttttcccaata 8559910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 15968461 - 15968540
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||||||  ||||||||| |  ||||||||| ||||||||||| |||||| |||||| |||| ||| ||||||||||||    
T  15968461 aaggtgagggttgtctcctctaaataaactcttatcaagagtctaatctatacgatgtgggacatggatttttcccaata 15968540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 32931516 - 32931409
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||| |   |||||||||||    
T  32931516 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaatgatatctatccgat 32931417  T
Q  289 gtaggact 296  Q
    || |||||    
T  32931416 gtgggact 32931409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 8056273 - 8056343
Alignment:
Q  236 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttc 306  Q
    ||||| |||| ||||| | |||||||||| ||||||||||| |||| |||||||| |||| ||||||||||    
T  8056273 gtgaggattgcctcctctatataaactcttatcaagagtcttatctttccgatgtgggacatgggtttttc 8056343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 247 - 312
Target Start/End: Complemental strand, 5496618 - 5496553
Alignment:
Q  247 ctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||| |||||||||| |||||||||||||| |||||  ||||| ||||||| |||||| ||||||    
T  5496618 ctcctctttataaactttcatcaagagtctcgtctatttgatgtgggacttgagttttttccaata 5496553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 189 - 313
Target Start/End: Complemental strand, 15857089 - 15856964
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccg-atttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    ||||| ||||||||  || |||||| |||| ||||||| ||||| |||||||  |||| ||| | ||||||||||||  || ||||||| |||||| |||    
T  15857089 tgttgaaatttgggacctaactcatccttagaaaaccggatttgtaaggtgatgattgcctcatctttataaactcttctcgagagtcttatctattcga 15856990  T
Q  288 tgtaggacttgggtttttcccaataa 313  Q
     || | |||| |||||||||||||||    
T  15856989 cgttgaacttaggtttttcccaataa 15856964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 312
Target Start/End: Complemental strand, 15857216 - 15857171
Alignment:
Q  267 tcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||||    
T  15857216 tcaagagtcttatctatccgatgtgggacttgagtttttcccaata 15857171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 311
Target Start/End: Original strand, 8056482 - 8056598
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    |||| |||| || |||||||||||||||| || ||   ||  |||| |||||||||| | ||||||| || ||||||||||| ||||||| ||||| |||    
T  8056482 aattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttatcaagagtcttatctatctgatgtggga 8056581  T
Q  295 cttgggtttttcccaat 311  Q
    | || |||||| |||||    
T  8056582 catgtgttttttccaat 8056598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 312
Target Start/End: Complemental strand, 43599550 - 43599510
Alignment:
Q  272 agtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||| ||||||||||||| |||||||||||||||||||||    
T  43599550 agtcttatctatccgatgtgggacttgggtttttcccaata 43599510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 3895450 - 3895372
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| |||| || || | |||||| ||| ||||||||||| |||||||||||||| ||| ||||||||| ||||||    
T  3895450 aaggtgaggattgccttctctatataaattcttatcaagagtcttatctatccgatgta-gacatgggttttttccaata 3895372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 21085137 - 21085244
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || ||||||  ||||||||||   ||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||||||    
T  21085137 tgttgaaatttggggcctaactcatcattacaaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgat 21085236  T
Q  289 gtaggact 296  Q
    || |||||    
T  21085237 gtgggact 21085244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 21653442 - 21653335
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||| | || |||||| ||||||||||||  ||| |||||||||| || ||||| | ||||||||||  |||||||    |||||||||||    
T  21653442 tgttgaaatttggagcctaactcatccttacaaaaccggcttgtaaggtgagaagtgcctcctctatataaactcttctcaagagcactatctatccgat 21653343  T
Q  289 gtaggact 296  Q
    || |||||    
T  21653342 gtgggact 21653335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 21653919 - 21653812
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||||||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| | |||||||| |  |||||||    |||||||||||    
T  21653919 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctgtataaacttttctcaagagcactatctatccgat 21653820  T
Q  289 gtaggact 296  Q
    || |||||    
T  21653819 gtgggact 21653812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 264
Target Start/End: Complemental strand, 22277639 - 22277564
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactct 264  Q
    ||||| |||||||||  | |||||| ||||||||||||  ||| |||||||| | |||||||| ||||||||||||    
T  22277639 tgttgaaatttggggattaactcatccttacaaaaccggcttgtaaggtgagtagtgtctcctctttataaactct 22277564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 311
Target Start/End: Original strand, 37537123 - 37537206
Alignment:
Q  228 tttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaat 311  Q
    |||| |||||| | |||||||||| |||| | |||||  |||| ||||| |||||| |||||| ||||||| ||||||||||||    
T  37537123 tttgtaaggtggggattgtctcctctttacatactcttctcaaaagtcttatctattcgatgtgggacttgagtttttcccaat 37537206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 43984305 - 43984412
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| | |||||| | || ||||| |||||||||||| ||||||  ||  ||||| |||||    
T  43984305 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtatggtgaggagtgcctcctctttataaactctgatcaagcttccaatctaaccgat 43984404  T
Q  289 gtaggact 296  Q
    || |||||    
T  43984405 gtgggact 43984412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 312
Target Start/End: Complemental strand, 30066029 - 30065983
Alignment:
Q  266 atcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||||||||| ||||||| ||||| ||||||| |||||||||||||    
T  30066029 atcaagagtcttatctatctgatgtgggacttgagtttttcccaata 30065983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 23027823 - 23027924
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    ||||||||| || ||||||||||| |||||||  ||| |||||||| | || ||||| ||||||| ||||  ||||||||   |||||||| |||| |||    
T  23027823 aatttggggcctaactcattcttaaaaaaccggcttgtaaggtgaggagtgcctcctctttataagctcttctcaagagttctatctatcctatgtggga 23027922  T
Q  295 ct 296  Q
    ||    
T  23027923 ct 23027924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 208 - 312
Target Start/End: Complemental strand, 39125020 - 39124916
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 307  Q
    ||||||||||||||||| |  ||| ||| |||| | || ||||| |||||||||||| ||  ||||||   | ||||| |||| |||| |||||||||||    
T  39125020 actcattcttacaaaactggcttgtaagatgaggagtgcctcctctttataaactcttattgagagtcctgtttatccaatgtgggacctgggtttttcc 39124921  T
Q  308 caata 312  Q
    |||||    
T  39124920 caata 39124916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 3e-40; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 127 - 314
Target Start/End: Complemental strand, 9378971 - 9378783
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| |||||||||||||||||| |||||| |||||||||||    
T  9378971 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgtaatttggggtctaactcatccttacaaaacc 9378872  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaa 314  Q
    |  ||| ||||  || |||| ||||| ||||||||||||  |||||||||| |||||| |||||| |||||||||||||||||||||||    
T  9378871 ggcttgtaaggcaaggattgcctcctctttataaactcttctcaagagtcttatctattcgatgtgggacttgggtttttcccaataaa 9378783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 127 - 313
Target Start/End: Original strand, 13310351 - 13310538
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || ||||||||| || | |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  13310351 ctctttgggcttggtgcgtaaacaggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 13310450  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    | ||||  | ||||| | |||||||| ||||||||||||| |||||||||||||||||| || || ||||||||||||||| ||||||    
T  13310451 ggtttgtgaagtgaggagtgtctcctctttataaactctcgtcaagagtctcatctatctgacgtgggacttgggtttttctcaataa 13310538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 127 - 312
Target Start/End: Complemental strand, 23396787 - 23396601
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  23396787 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 23396688  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |  ||| |||||||| |||| ||| | |||||| |||||  |||||||||| ||||||||| ||| |||||||| ||||||||||||    
T  23396687 ggcttgtaaggtgaggattgcctcatctttatatactcttctcaagagtcttatctatccgttgtgggacttggatttttcccaata 23396601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 127 - 313
Target Start/End: Original strand, 40703785 - 40703972
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| |||   | ||||| | ||| |||||||||  | |||||| |||||||| ||    
T  40703785 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagcgttgataccatattgaaatttggggcataactcatccttacaaatcc 40703884  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    || |||  ||||||| | |||||||| |||||||||||||||||||||||||||||||||||||| ||||||| | |||||| |||||    
T  40703885 gacttgtgaggtgaggagtgtctcctctttataaactctcatcaagagtctcatctatccgatgtgggacttgagcttttccaaataa 40703972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 188 - 312
Target Start/End: Complemental strand, 6783154 - 6783030
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    |||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||    
T  6783154 ctgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccga 6783055  T
Q  288 tgtaggacttgggtttttcccaata 312  Q
    |||  ||||||||||||||||||||    
T  6783054 tgtgagacttgggtttttcccaata 6783030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 189 - 312
Target Start/End: Complemental strand, 33855806 - 33855683
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || ||||||||||||||||||| ||   |||||||| | |||||||| |||||||||| | |||| |||||| |||||||||||    
T  33855806 tgttgaaatttggggcctaactcattcttacaaaaccggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttatctatccgat 33855707  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||||||||||||||||||    
T  33855706 gtgggacttgggtttttcccaata 33855683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 163 - 306
Target Start/End: Complemental strand, 31374907 - 31374763
Alignment:
Q  163 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 261  Q
    |||| ||||||| ||| ||||||| | ||||| |||| ||||||| |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||||||    
T  31374907 ccttgaattcgacaagctctaatatcatgttgaaattcggggtctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaac 31374808  T
Q  262 tctcatcaagagtctcatctatccgatgtaggacttgggtttttc 306  Q
    |||  |||| ||||| |||||||||||||||||||||| ||||||    
T  31374807 tcttctcaatagtcttatctatccgatgtaggacttggatttttc 31374763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 215 - 312
Target Start/End: Complemental strand, 9379089 - 9378992
Alignment:
Q  215 cttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||||||| |||| |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||||| | |||||||||||||||||||    
T  9379089 cttacaaaaccggtttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtggaacttgggtttttcccaata 9378992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 23821665 - 23821788
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||| | ||| ||||| ||||||| ||||| |||||||||| ||||||| ||||| || ||||||||    
T  23821665 tgttgaaatttggggcctaactcatccttacaaaaccaacttgtaaggtaagaattgcctcctctttataaactgtcatcaaaagtcttatttatccgat 23821764  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    ||   |||||||||||||||||||    
T  23821765 gtgaaacttgggtttttcccaata 23821788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 197 - 312
Target Start/End: Original strand, 35866636 - 35866751
Alignment:
Q  197 tttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 296  Q
    ||||||| || |||||| ||||||||||||  ||| ||| |||| |||| | ||| | |||||||||| ||||||||||| ||||||||||||| |||||    
T  35866636 tttggggcctaactcatccttacaaaaccggcttgtaagttgagtattgccccctctatataaactcttatcaagagtcttatctatccgatgtgggact 35866735  T
Q  297 tgggtttttcccaata 312  Q
    ||||||||||||||||    
T  35866736 tgggtttttcccaata 35866751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 163 - 312
Target Start/End: Complemental strand, 16565036 - 16564886
Alignment:
Q  163 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 261  Q
    |||| ||||||||||| ||| ||||| ||||| |||||  || || |||||| |||| ||||||| ||   |||||||| | || ||||| |||||||||    
T  16565036 ccttgaattcgataagctctgataccatgttgaaatttaaggcctaactcatccttaaaaaaccggttcataaggtgaggagtgcctcctatttataaac 16564937  T
Q  262 tctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||| || |||||||| ||||||||||||| |||||||||||||||||||||    
T  16564936 tcttattaagagtcttatctatccgatgtgggacttgggtttttcccaata 16564886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 163 - 312
Target Start/End: Original strand, 16600626 - 16600776
Alignment:
Q  163 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 261  Q
    |||| ||||||||||| ||| ||||| ||||| |||||  || || |||||| |||| ||||||| ||   |||||||| | || ||||| |||||||||    
T  16600626 ccttgaattcgataagctctgataccatgttgaaatttaaggcctaactcatccttaaaaaaccggttcataaggtgaggagtgcctcctatttataaac 16600725  T
Q  262 tctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||| || |||||||| ||||||||||||| |||||||||||||||||||||    
T  16600726 tcttattaagagtcttatctatccgatgtgggacttgggtttttcccaata 16600776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 196 - 314
Target Start/End: Original strand, 39808593 - 39808711
Alignment:
Q  196 atttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggac 295  Q
    |||||||| || |||||| || ||||||| |  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| ||||    
T  39808593 atttggggcctaactcatcctcacaaaactggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggac 39808692  T
Q  296 ttgggtttttcccaataaa 314  Q
    |||||||||||||||||||    
T  39808693 ttgggtttttcccaataaa 39808711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 189 - 310
Target Start/End: Original strand, 6813067 - 6813188
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| || |||||||||  |||  || |||| | || ||||| ||||||||||||||||||||||| ||||||||||||    
T  6813067 tgttgaaatttggggcctaactcatcctcacaaaaccggcttgtgagttgaggagtgcctcctctttataaactctcatcaagagtcccatctatccgat 6813166  T
Q  289 gtaggacttgggtttttcccaa 310  Q
    || ||||||| |||||||||||    
T  6813167 gtgggacttgtgtttttcccaa 6813188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 218 - 314
Target Start/End: Complemental strand, 6782912 - 6782816
Alignment:
Q  218 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaa 314  Q
    |||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| |||||||||||||  ||||||||||||||||||||||    
T  6782912 acaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgagacttgggtttttcccaataaa 6782816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 234 - 313
Target Start/End: Original strand, 6751743 - 6751822
Alignment:
Q  234 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    ||||||| | || ||||| ||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  6751743 aggtgaggagtgcctcctctttgtaaactctcatcaagaatctcatctatccgatgtgggacttgggtttttcccaataa 6751822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 16565169 - 16565090
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| | || ||||| |||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  16565169 aaggtgaggagtgcctcctatttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 16565090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 16600493 - 16600572
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| | || ||||| |||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  16600493 aaggtgaggagtgcctcctatttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 16600572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 31357708 - 31357787
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| |||||||||| | |||||||||| ||||||||||| ||||||||||||| |||| ||||||||||||||||    
T  31357708 aaggtgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggtttttcccaata 31357787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 234 - 312
Target Start/End: Original strand, 6751539 - 6751617
Alignment:
Q  234 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||||| | || ||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  6751539 aggtgaggagtgcctcctctttgtaaactctcatcaagagtctcatctatccgatttgggacttgggtttttcccaata 6751617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 218 - 312
Target Start/End: Complemental strand, 29252662 - 29252568
Alignment:
Q  218 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| |||||||||| || |||||||||||||||||||||    
T  29252662 acaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgacgtgggacttgggtttttcccaata 29252568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 187 - 296
Target Start/End: Original strand, 1661178 - 1661287
Alignment:
Q  187 cctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccg 286  Q
    ||||||| ||||||||| || |||||||||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||||| | |||||||||    
T  1661178 cctgttgaaatttggggcctaactcattcttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagttttatctatccg 1661277  T
Q  287 atgtaggact 296  Q
    |||| |||||    
T  1661278 atgtgggact 1661287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 195 - 312
Target Start/End: Original strand, 40703647 - 40703764
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    |||| |||| || |||||| ||||||||||||  |||  ||||||| | |||||||| |||||||| |||||||||||||||||| ||| |||||| |||    
T  40703647 aattaggggcctaactcatccttacaaaaccggcttgtgaggtgaggagtgtctcctctttataaagtctcatcaagagtctcatttattcgatgtggga 40703746  T
Q  295 cttgggtttttcccaata 312  Q
    ||||| |||||| |||||    
T  40703747 cttggttttttctcaata 40703764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 233 - 313
Target Start/End: Complemental strand, 33834021 - 33833941
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    |||||||| |||||||||| | |||||||||| ||||||||||| ||||||||||||| |||| ||||||||| |||||||    
T  33834021 aaggtgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggttttttccaataa 33833941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 137 - 312
Target Start/End: Original strand, 38948350 - 38948525
Alignment:
Q  137 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaag 235  Q
    |||||| ||||||| |||||||||| |||| ||||||| ||| ||| ||||| |  || |||| | ||||| |||||| |||| |||| | |||  ||||    
T  38948350 ttggtgtgtgaataggtttaggcagcccttgaattcgacaagctctgataccataatgaaattggaggtctaactcatcctta-aaaatcaattcacaag 38948448  T
Q  236 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||||||||||| | |||||||||| || |||||||| |||| |||||||| |||| ||  ||||||||||||    
T  38948449 gtgagaattgtctcctctatataaactcttataaagagtcttatctttccgatgtgggacatgattttttcccaata 38948525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 127 - 312
Target Start/End: Original strand, 6813211 - 6813395
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| ||  |||  | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||  | || ||||||||    
T  6813211 ctctttgggcttggtgcgtgaatatgt--aggtggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaacttgtcctcacaaaacc 6813308  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |  |||  ||||||| | || ||||| ||||||||||||||||||||||| |||||||| ||||  ||||||||| |||||||||||    
T  6813309 ggcttgtgaggtgaggagtgcctcctctttataaactctcatcaagagtcccatctatctgatgcgggacttggggttttcccaata 6813395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 22841123 - 22841044
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| |||||||||| | |||||||||| | ||||||||| |||||||||||||||| | ||||||||||||||||    
T  22841123 aaggtgaggattgtctcctctatataaactcttaccaagagtcttatctatccgatgtagggcatgggtttttcccaata 22841044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 5775939 - 5775873
Alignment:
Q  247 ctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    ||||| ||||||||||||||| ||||||||||||||| |||||| ||||||| ||||||||||||||    
T  5775939 ctcctctttataaactctcattaagagtctcatctatgcgatgtgggacttgagtttttcccaataa 5775873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 216 - 312
Target Start/End: Complemental strand, 2179743 - 2179646
Alignment:
Q  216 ttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctca-tcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||||||| | |||| |||||||| |||||||||| ||||||||||||   |||||||||| ||||||||||||| |||||||  ||||||||||||    
T  2179743 ttacaaaactggtttgtaaggtgaggattgtctcctctttataaactctttctcaagagtcttatctatccgatgtgggacttgaatttttcccaata 2179646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 312
Target Start/End: Complemental strand, 48114053 - 48113989
Alignment:
Q  248 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||| |||||||||||| ||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  48114053 tcctctttataaactcttatcaagagtcttatctatccgatgtgggacttgggttattcccaata 48113989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 163 - 312
Target Start/End: Complemental strand, 258571 - 258423
Alignment:
Q  163 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 261  Q
    |||| ||||||| ||| ||| ||||| ||||| ||||||||| || ||||||  | ||||||||   |||  | ||||| | || ||||| || || |||    
T  258571 ccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatcatcacaaaaccagcttgtgaagtgaggagtgcctcctcttcatcaac 258472  T
Q  262 tctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  258471 tctcatcaagagtctcatctatccgatg--ggacttgggtttttcccaata 258423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 4258033 - 4258112
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| | || ||||| || ||||||||| ||||||||||| |||||||||||||  ||||||||||||||||||||    
T  4258033 aaggtgaggagtgcctcctattgataaactcttatcaagagtcttatctatccgatgtgagacttgggtttttcccaata 4258112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 163 - 305
Target Start/End: Complemental strand, 8682026 - 8681883
Alignment:
Q  163 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 261  Q
    |||| ||||||| ||| ||| ||||| ||||| |||||| || || |||||||||||||||||||| ||  | | |||  |||| ||| | |||||||||    
T  8682026 ccttgaattcgacaagctctgataccatgttgaaatttgaggcctaactcattcttacaaaaccgacttatatgttgaagattgcctcttctttataaac 8681927  T
Q  262 tctcatcaagagtctcatctatccgatgtaggacttgggttttt 305  Q
    ||| ||||||||||| ||||||| ||||| |||||||| |||||    
T  8681926 tcttatcaagagtcttatctatctgatgtgggacttggattttt 8681883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 33834226 - 33834147
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| |||||||||| | |||||||||| ||||||||||| ||||||| ||||| |||| ||| ||||||||||||    
T  33834226 aaggtgaggattgtctcctctatataaactcttatcaagagtcttatctatctgatgtgggacatggatttttcccaata 33834147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 155 - 308
Target Start/End: Complemental strand, 43566113 - 43565960
Alignment:
Q  155 taggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctccttt 253  Q
    ||||||| | || ||||||| ||| ||||||||| ||||| |||||||||||| || ||||||||||||| ||  ||  |||||||| | |||| |||||    
T  43566113 taggcagcctttgaattcgacaagctctaataccatgttgaaatttggggtctaacccattcttacaaaatcggcttataaggtgaggagtgtcaccttt 43566014  T
Q  254 ttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttccc 308  Q
    | ||||||||||||||| |||||  | |||||||| | | ||||| |||||||||    
T  43566013 t-ataaactctcatcaaaagtcttgtttatccgatatggtacttgagtttttccc 43565960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 255 - 312
Target Start/End: Complemental strand, 23390639 - 23390582
Alignment:
Q  255 tataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||||| ||||||||||| ||||||||||||| |||| ||||||||||||||||    
T  23390639 tataaactcttatcaagagtcttatctatccgatgtgggacatgggtttttcccaata 23390582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 33855541 - 33855473
Alignment:
Q  244 tgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| |||||||||| | |||| |||||| ||||||||||| | |||||||||||||||||||||    
T  33855541 tgtctcctctttataaactattatcacgagtcttatctatccgatatgggacttgggtttttcccaata 33855473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 195 - 307
Target Start/End: Complemental strand, 36621130 - 36621019
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    |||||||| |||  ||||| |||||||||||| ||||  || |||| | ||  |||| |||||||| ||||||||||||||||||| |||||||||| ||    
T  36621130 aatttgggatctatctcatccttacaaaaccggtttgtgagatgaggagtgcatcctctttataaaatctcatcaagagtctcatc-atccgatgtaaga 36621032  T
Q  295 cttgggtttttcc 307  Q
    |||| ||||||||    
T  36621031 cttgagtttttcc 36621019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 43366467 - 43366399
Alignment:
Q  244 tgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| ||||||||||||||||||||||||| || || |||||| ||| |||| ||||||||||||    
T  43366467 tgtctcctctttataaactctcatcaagagtctcgtcaattcgatgtgggatttggatttttcccaata 43366399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 312
Target Start/End: Original strand, 4258261 - 4258316
Alignment:
Q  257 taaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| ||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  4258261 taaactcttatcaagagtcttatctatccgatgtgggacttgagtttttcccaata 4258316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 10903314 - 10903389
Alignment:
Q  237 tgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||| |||| ||||| | |||||||||| ||||||||||| ||||||||||||| |||| || |||||||||||||    
T  10903314 tgaggattgcctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgtgtttttcccaata 10903389  T

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Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 10903521 - 10903596
Alignment:
Q  237 tgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||| |||| ||||| | |||||||||| ||||||||||| ||||||||||||| |||| || |||||||||||||    
T  10903521 tgaggattgcctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgagtttttcccaata 10903596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 23396929 - 23396814
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||| ||| |||  |||| ||||| |||||| ||||| ||||||||||| ||||||  | |    
T  23396929 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaagttgatgattgcctcctctttatatactcttatcaagagtcttatctatatgtt 23396830  T
Q  289 gtaggacttgggtttt 304  Q
    || |||||||| ||||    
T  23396829 gtgggacttggatttt 23396814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 202 - 312
Target Start/End: Complemental strand, 5266461 - 5266351
Alignment:
Q  202 ggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggt 301  Q
    ||||| |||||| |||||||||||| ||   ||| |||| ||||  |||| | ||||| |||| ||||||||||| ||||||| ||||| |||| |||||    
T  5266461 ggtctaactcatccttacaaaaccggttcataagttgaggattggatcctctatataatctcttatcaagagtcttatctatctgatgtgggacatgggt 5266362  T
Q  302 ttttcccaata 312  Q
    |||||||||||    
T  5266361 ttttcccaata 5266351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 247 - 304
Target Start/End: Original strand, 47856038 - 47856095
Alignment:
Q  247 ctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttt 304  Q
    ||||| |||||||||||| ||||||||||| ||||||||||||| ||| |||||||||    
T  47856038 ctcctctttataaactcttatcaagagtcttatctatccgatgtgggatttgggtttt 47856095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 1663593 - 1663701
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcct-ttttataaactctcatcaagagtctcatctatccga 287  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||||  ||||||||   ||||||||||    
T  1663593 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctcttttataaactcttctcaagagtgctatctatccga 1663692  T
Q  288 tgtaggact 296  Q
    ||| |||||    
T  1663693 tgtgggact 1663701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 312
Target Start/End: Complemental strand, 2232211 - 2232087
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||| |||| | |||||  ||||||||| ||  |||  ||||||| |||| ||||| | |||||||||| ||||||||| | |||||||||||    
T  2232211 tgttgaaatttagggtataactcaaccttacaaaatcggcttgtgaggtgaggattgcctcctctatataaactcttatcaagagttttatctatccgat 2232112  T
Q  289 gtaggacttg-ggtttttcccaata 312  Q
    | |||||||| ||||||| ||||||    
T  2232111 gcaggacttgaggttttttccaata 2232087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 29780256 - 29780176
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtc 275  Q
    ||||||||| || |||||| |||| |||||||| ||| |||||||| | |||||||| ||||||||||||  |||||||||    
T  29780256 aatttggggcctaactcatccttataaaaccgacttgtaaggtgaggagtgtctcctctttataaactcttctcaagagtc 29780176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 36237897 - 36237793
Alignment:
Q  209 ctcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttccc 308  Q
    ||||| ||||||||||||  ||| |||| ||| | || ||||| |||||||||||| ||||||||||  || ||||| |||| |||||||||| |||||     
T  36237897 ctcatccttacaaaaccggcttgtaaggagaggagtgcctcctctttataaactcttatcaagagtcctatgtatccaatgtgggacttgggtgtttccg 36237798  T
Q  309 aataa 313  Q
    |||||    
T  36237797 aataa 36237793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 296
Target Start/End: Original strand, 37272053 - 37272141
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 296  Q
    |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||| ||||||||||  ||||| ||||||| |||||    
T  37272053 actcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccgatgtgggact 37272141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 195 - 290
Target Start/End: Original strand, 7135238 - 7135333
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 290  Q
    ||||||||| || ||||||  |||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||||||  |||||||||||||    
T  7135238 aatttggggcctaactcatctttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgatgt 7135333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 269 - 312
Target Start/End: Original strand, 23821540 - 23821583
Alignment:
Q  269 aagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  23821540 aagagtctcatctatcctatgtgggacttgggtttttcccaata 23821583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 6214302 - 6214356
Alignment:
Q  267 tcaagagtctcatctatccgatgtaggacttgggtttttcccaataaagaatcct 321  Q
    ||||||||||  |||||||||||| |||||||||||||||||||||  |||||||    
T  6214302 tcaagagtcttgtctatccgatgtgggacttgggtttttcccaatatcgaatcct 6214356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 233 - 290
Target Start/End: Complemental strand, 29645886 - 29645829
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 290  Q
    |||||||| |||| ||||||| |||||||||  ||||||||||| |||||||||||||    
T  29645886 aaggtgaggattgcctcctttatataaactcatatcaagagtcttatctatccgatgt 29645829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 289
Target Start/End: Original strand, 39808460 - 39808553
Alignment:
Q  196 atttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatg 289  Q
    |||||||| || |||||| || |||||||||  ||  |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||    
T  39808460 atttggggcctaactcatcctcacaaaaccggcttttaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatg 39808553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 296
Target Start/End: Original strand, 43384279 - 43384376
Alignment:
Q  199 tggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 296  Q
    ||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||| ||  ||||||||||||| |||||    
T  43384279 tggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggact 43384376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 21557067 - 21557007
Alignment:
Q  253 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    |||||||||||| |||||||||   ||||||||||||| ||||||| |||||| |||||||    
T  21557067 tttataaactcttatcaagagttctatctatccgatgtgggacttgagttttttccaataa 21557007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 296
Target Start/End: Complemental strand, 27585352 - 27585264
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 296  Q
    |||||| ||||||||||||  ||| | |||||| | || ||||||||||||||||||  |||||| ||  ||||||||||||| |||||    
T  27585352 actcatccttacaaaaccggcttgtacggtgaggagtgcctcctttttataaactcttctcaagaatcctatctatccgatgtgggact 27585264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 264
Target Start/End: Complemental strand, 28910148 - 28910072
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactct 264  Q
    |||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||    
T  28910148 ctgttgaaatttgggggctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct 28910072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 312
Target Start/End: Original strand, 40137704 - 40137808
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 307  Q
    |||||| ||||||||||||  | | |||||||| | |||||| | |||||||||||| || |||||||   ||||||| |||| || |||||||||| ||    
T  40137704 actcatccttacaaaaccggctcgtaaggtgaggagtgtctcttctttataaactcttattaagagtcctgtctatccaatgtggggcttgggttttgcc 40137803  T
Q  308 caata 312  Q
    |||||    
T  40137804 caata 40137808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 12578449 - 12578556
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||||||||| |||||| ||||||||| ||| ||| |||| ||| | || ||||| ||| |||||||| ||||||  ||  ||||| |||||    
T  12578449 tgttgaaatttggggtctaactcatccttacaaaatcgaattgtaaggcgaggagtgcctcctctttctaaactctgatcaagcttcctatctaaccgat 12578548  T
Q  289 gtaggact 296  Q
    || |||||    
T  12578549 gtgggact 12578556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 305
Target Start/End: Complemental strand, 24426858 - 24426752
Alignment:
Q  198 ttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 297  Q
    ||||||||| ||||| ||||| ||||| | |||  |||||||| | | ||| || |||||||||||| ||||||||| | |||||||||| || ||||||    
T  24426858 ttggggtctaactcactcttataaaactggtttataaggtgaggaatatcttctctttataaactcttatcaagagt-ttatctatccgacgtgggactt 24426760  T
Q  298 gggttttt 305  Q
     |||||||    
T  24426759 tggttttt 24426752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 29646135 - 29646056
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| |||| ||||| | |||||||||  ||||||||||| |||||||| |||| |||| ||  ||||||||||||    
T  29646135 aaggtgaggattgcctcctctatataaactcctatcaagagtcttatctatccaatgtgggacatgaatttttcccaata 29646056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 290
Target Start/End: Complemental strand, 43288373 - 43288278
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 290  Q
    ||||||||| || |||||  ||||||||||||  ||| ||| |||| | || ||||| |||||||||||| ||||||||||  ||||| |||||||    
T  43288373 aatttggggcctaactcacccttacaaaaccggattgtaagatgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccgatgt 43288278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 290
Target Start/End: Complemental strand, 43288641 - 43288546
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 290  Q
    ||||||||| || ||| || ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||||||| ||| | |||||||    
T  43288641 aatttggggcctaactaatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttgtcaagagtcttatcaaaccgatgt 43288546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 312
Target Start/End: Complemental strand, 30768488 - 30768410
Alignment:
Q  234 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||||| || ||||||| | |||||| | | ||||||||||| ||||||||||||| |||| || |||||||| ||||    
T  30768488 aggtgaggatcgtctcctctatataaattattatcaagagtcttatctatccgatgtgggacatgagtttttcctaata 30768410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 202 - 296
Target Start/End: Complemental strand, 34748880 - 34748786
Alignment:
Q  202 ggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 296  Q
    ||||| |||||| ||||||||||||  ||| | |||||| | || ||||| ||||||||||||  |||||| ||  ||||||||||||| |||||    
T  34748880 ggtctaactcatccttacaaaaccggcttgtacggtgaggaatgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggact 34748786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 257262 - 257363
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    ||||||||| || |||||| ||||||||||||  | | |||||||| | || ||||| ||||||||||||  |||||| |   ||||||||||||| |||    
T  257262 aatttggggcctaactcatccttacaaaaccggctagtaaggtgaggagtgcctcctctttataaactcttctcaagaataatatctatccgatgtggga 257361  T
Q  295 ct 296  Q
    ||    
T  257362 ct 257363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 295
Target Start/End: Complemental strand, 14691162 - 14691081
Alignment:
Q  214 tcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggac 295  Q
    ||||||||||| |  ||| |||||||| | |||||||| |||||||||||| |||||| |||  ||||| ||||||| ||||    
T  14691162 tcttacaaaactggcttgtaaggtgaggagtgtctcctctttataaactcttatcaagcgtcctatctaaccgatgtgggac 14691081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 268
Target Start/End: Original strand, 40703406 - 40703479
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatc 268  Q
    ||||||||| || |||||| ||||||||||||  |||  ||||||| | || ||||| ||||||||||||||||    
T  40703406 aatttggggcctaactcatccttacaaaaccggcttgtgaggtgaggagtgcctcctctttataaactctcatc 40703479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 271
Target Start/End: Original strand, 12518165 - 12518241
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaag 271  Q
    ||||||||| || |||||| ||||||||||||| ||| |||| ||| | || | ||| |||||||||||| ||||||    
T  12518165 aatttggggcctaactcatccttacaaaaccgaattgtaaggcgaggagtgccccctctttataaactctgatcaag 12518241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 188 - 276
Target Start/End: Complemental strand, 34590644 - 34590556
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtct 276  Q
    |||||| |||||||||  | |||||| |||||||||||| ||   |||||||| | || ||||| |||||||||||| || ||||||||    
T  34590644 ctgttgaaatttggggcttaactcatccttacaaaaccggttcataaggtgaggagtgcctcctctttataaactcttatgaagagtct 34590556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 200 - 296
Target Start/End: Original strand, 36092599 - 36092695
Alignment:
Q  200 ggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 296  Q
    ||||||| |||||| |||||||||||   ||| |||||||| | || ||||| | ||||||||||  |||||| ||  ||||||||||||| |||||    
T  36092599 ggggtctaactcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctctataaactcttctcaagaatcctatctatccgatgtgggact 36092695  T

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Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 188 - 288
Target Start/End: Original strand, 43167881 - 43167981
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    |||||| |||||||||  | |||||| ||||||||||||  |   |||||||| |||| ||||| ||||||||||||  ||||||||   ||||||||||    
T  43167881 ctgttgaaatttggggcttaactcatccttacaaaaccggctcataaggtgaggattgcctcctctttataaactcttctcaagagtgctatctatccga 43167980  T
Q  288 t 288  Q
    |    
T  43167981 t 43167981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 208 - 296
Target Start/End: Original strand, 43383954 - 43384042
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 296  Q
    |||||| |||||||||||| |||| |||| ||| | || ||||| ||||||||||||   ||||| ||  ||||||||||||| |||||    
T  43383954 actcatccttacaaaaccggtttgtaaggggagtagtgcctcctctttataaactctttgcaagactcctatctatccgatgtgggact 43384042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 271
Target Start/End: Original strand, 48116291 - 48116367
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaag 271  Q
    ||||||| | || |||||| ||||||||||||  ||| |||||||| | ||| |||| |||||||||||| ||||||    
T  48116291 aatttggagcctaactcatccttacaaaaccggcttgtaaggtgaggagtgtgtcctctttataaactctgatcaag 48116367  T

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Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 49040624 - 49040580
Alignment:
Q  246 tctcctttttataaactctcatcaagagtctcatctatccgatgt 290  Q
    |||||| | |||||||||| ||||||||||| |||||||||||||    
T  49040624 tctcctctatataaactcttatcaagagtcttatctatccgatgt 49040580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 3e-40; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 137 - 316
Target Start/End: Original strand, 18914304 - 18914484
Alignment:
Q  137 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaag 235  Q
    ||||||||||||||||||||||| | |||| ||||||| ||| ||  ||||| ||||| ||||||||| || ||||||||||||||||||   ||| |||    
T  18914304 ttggtgcgtgaataagtttaggcggcccttgaattcgacaagctccgataccatgttgaaatttggggcctaactcattcttacaaaaccagcttgtaag 18914403  T
Q  236 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaaga 316  Q
    ||||| ||||||||||||||||||||| |  ||||||||||   ||||||||||| |||||||||||||||||||||||||    
T  18914404 gtgaggattgtctcctttttataaacttttctcaagagtcttgactatccgatgtgggacttgggtttttcccaataaaga 18914484  T

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Target: chr5; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 127 - 313
Target Start/End: Complemental strand, 13413761 - 13413575
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| ||||||||||||||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  13413761 ctctttgggcttggtgcgtgaataggtttaggcagtccttgaattcga-aagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 13413663  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    |  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||  ||||| ||||||||||||||||||||||    
T  13413662 ggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatttgatgtgggacttgggtttttcccaataa 13413575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 127 - 312
Target Start/End: Complemental strand, 38376909 - 38376723
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || || |||| |||||| |||||||| | |||| | ||||| ||| ||| ||||| ||||||||||||||| || |||||| |||||||||||    
T  38376909 ctctttgggcttagtgcatgaataggtttaggcggcccttgacttcgacaagctctgataccatgttgtaatttggggcctaactcatccttacaaaacc 38376810  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |  ||| |||||||| |||||||||| ||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||    
T  38376809 ggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 38376723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 127 - 313
Target Start/End: Original strand, 20720476 - 20720663
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || ||||||||||||||||||||||| | |||| ||||||||||| ||| ||||| ||||  |||||||||||| |||||| |||||||||||    
T  20720476 ctctttgggcttggtgcgtgaataagtttaggcggcccttgaattcgataagctctgataccatgttaaaatttggggtctaactcatccttacaaaacc 20720575  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    |  ||| || ||||| | || |||||||||| ||||||| ||||||| ||| ||||||| ||||| ||||||| ||||||||||||||    
T  20720576 ggcttgtaaagtgaggagtgcctcctttttacaaactcttatcaagaatcttatctatctgatgtgggacttgagtttttcccaataa 20720663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 137 - 306
Target Start/End: Original strand, 40168977 - 40169147
Alignment:
Q  137 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaag 235  Q
    |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| ||||||||||||  ||| |||    
T  40168977 ttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaag 40169076  T
Q  236 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttc 306  Q
    |||||||||| ||||| |||||| |||||  |||||||||| ||||||| ||||| |||||||||||||||    
T  40169077 gtgagaattgcctcctctttatatactcttctcaagagtcttatctatctgatgtgggacttgggtttttc 40169147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 127 - 312
Target Start/End: Original strand, 43490389 - 43490575
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||| | ||| ||| ||||| ||||| |||| |||| || |||||| |||||||||||    
T  43490389 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcaacaagctctgataccatgttgaaattgggggcctaactcatccttacaaaacc 43490488  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |  ||| |||||||| ||||||| || ||||||||||||  ||||||||||  |||||||||||| |||||||||||||||||||||    
T  43490489 ggcttggaaggtgagtattgtcttctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 43490575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 127 - 310
Target Start/End: Original strand, 3015549 - 3015731
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| ||  |||  | |||| ||||||| ||| ||| ||||| ||||| ||||| ||| || |||||  |||||||||||    
T  3015549 ctctttgggcttggtgcgtgaataggt--aggtggcccttgaattcgacaagctctgataccatgttgaaatttagggcctaactcaaccttacaaaacc 3015646  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaa 310  Q
    |  ||||||||||||  ||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3015647 ggcttgcaaggtgagggttgcctcctctttatgaactctcatcaagagtctcatctatccgatgtgggacttgggtttttcccaa 3015731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 188 - 312
Target Start/End: Original strand, 18914149 - 18914273
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    |||||| ||||||||| || |||||||||||||||||| | ||| |||||||| ||||||||||||||||||||| |  ||||||||||   ||||||||    
T  18914149 ctgttgaaatttggggcctaactcattcttacaaaaccaacttgtaaggtgaggattgtctcctttttataaacttttctcaagagtcttgactatccga 18914248  T
Q  288 tgtaggacttgggtttttcccaata 312  Q
    ||| |||||||||||||||||||||    
T  18914249 tgtgggacttgggtttttcccaata 18914273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 127 - 305
Target Start/End: Complemental strand, 34457274 - 34457095
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  34457274 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 34457175  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttttt 305  Q
    |  ||| |||||||| ||||  |||| ||||||||||||  ||||||||||  |||||||||| | ||||||||||||||    
T  34457174 ggcttgtaaggtgaggattgcatcctctttataaactcttctcaagagtcttgtctatccgatatgggacttgggttttt 34457095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 195 - 312
Target Start/End: Original strand, 28358030 - 28358147
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    ||||||||| || |||||| ||||||||||||  ||| |||||||| |||||||||| ||||||||||||  ||||||||||  |||||||||||| |||    
T  28358030 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttgtctatccgatgtggga 28358129  T
Q  295 cttgggtttttcccaata 312  Q
    ||||||||||||||||||    
T  28358130 cttgggtttttcccaata 28358147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 188 - 304
Target Start/End: Original strand, 35526976 - 35527092
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    |||||||||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||    
T  35526976 ctgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccga 35527075  T
Q  288 tgtaggacttgggtttt 304  Q
    ||| |||||||||||||    
T  35527076 tgtgggacttgggtttt 35527092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 3015406 - 3015529
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||  ||||||||||||  |||||| |||||  ||| ||||| ||||| ||||||||||||||||||||||||||||||    
T  3015406 tgttgaaatttggggcctaactcaaccttacaaaaccggcttgcaatgtgagggttgcctcctctttatgaactctcatcaagagtctcatctatccgat 3015505  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || || ||||||||||||||||||    
T  3015506 gtggggcttgggtttttcccaata 3015529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 189 - 312
Target Start/End: Complemental strand, 34457418 - 34457295
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||||||||  |||| ||||||||||||  ||||||||||  ||||||||||    
T  34457418 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgagaattgcatcctctttataaactcttctcaagagtcttgtctatccgat 34457319  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||||||||||||||||||    
T  34457318 gtgggacttgggtttttcccaata 34457295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 189 - 314
Target Start/End: Complemental strand, 3763021 - 3762896
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||  |||| ||||| ||||||||||||  |||||||||| |||||||||||    
T  3763021 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaagattgcctcctctttataaactcttctcaagagtcttatctatccgat 3762922  T
Q  289 gtaggacttgggtttttcccaataaa 314  Q
    || |||| ||||||||||||||||||    
T  3762921 gtgggacatgggtttttcccaataaa 3762896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 127 - 313
Target Start/End: Original strand, 48237 - 48422
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| |||| |||| || |||||| |||||||||||    
T  48237 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaattgggggcctaactcatccttacaaaacc 48336  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    |  ||| |||||||| |||| ||||| |||||||||| |  ||||||||||  |||||   |||| ||||||||||||||||||||||    
T  48337 ggcttgtaaggtgaggattgcctcctctttataaacttttctcaagagtcttgtctat--aatgtgggacttgggtttttcccaataa 48422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 312
Target Start/End: Complemental strand, 24125177 - 24125054
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||| |||||||| |||  ||||| |||||| |||||  ||||||||||  | ||||||||    
T  24125177 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaggtgaggattacctcctctttatatactcttctcaagagtcttgtttatccgat 24125078  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    ||||||||||||||||||||||||    
T  24125077 gtaggacttgggtttttcccaata 24125054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 188 - 313
Target Start/End: Original strand, 35527262 - 35527388
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatc-aagagtctcatctatccg 286  Q
    |||||||||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||| ||||||||  || |||||||| | |||||||    
T  35527262 ctgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttgtaaactcttctctaagagtcttagctatccg 35527361  T
Q  287 atgtaggacttgggtttttcccaataa 313  Q
    |||| ||||||||||||||||||||||    
T  35527362 atgtgggacttgggtttttcccaataa 35527388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 195 - 312
Target Start/End: Original strand, 48099 - 48216
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    |||| |||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| |||    
T  48099 aattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtggga 48198  T
Q  295 cttgggtttttcccaata 312  Q
    ||||||||||||||||||    
T  48199 cttgggtttttcccaata 48216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 195 - 312
Target Start/End: Original strand, 2908557 - 2908674
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    |||||||| ||| |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||||||| |  ||||||||||  |||||||||||| |||    
T  2908557 aatttgggatctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactattctcaagagtcttgtctatccgatgtggga 2908656  T
Q  295 cttgggtttttcccaata 312  Q
    ||||||||||||||||||    
T  2908657 cttgggtttttcccaata 2908674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 217 - 312
Target Start/End: Original strand, 43490273 - 43490368
Alignment:
Q  217 tacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||||||||  ||| |||||||  |||||||||| ||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||    
T  43490273 tacaaaaccggcttgtaaggtgaagattgtctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 43490368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 137 - 312
Target Start/End: Original strand, 2908705 - 2908881
Alignment:
Q  137 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaag 235  Q
    |||||| ||||||| |||||||    |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| ||||||||||||  ||| |||    
T  2908705 ttggtgtgtgaataggtttaggtgacccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaag 2908804  T
Q  236 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||| |||| ||||| |||||||||| |  |||| |||||  |||||| ||||| |||||||| ||||||||||||    
T  2908805 gtgaggattgcctcctctttataaactattctcaaaagtcttgtctatctgatgtgggacttggatttttcccaata 2908881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 312
Target Start/End: Complemental strand, 28156211 - 28156028
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagt---ttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaa 222  Q
    |||||| || |||||||||||||| ||   |||||| | |||| ||||||| ||||||| ||| | ||||| ||||||||| || | |||| ||||||||    
T  28156211 ctctttgggcttggtgcgtgaataggtggtttaggcggcccttgaattcgacaagttctgatatcatgttgaaatttggggcctaattcatccttacaaa 28156112  T
Q  223 accgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||  ||| |||||||| |||| ||||| ||||||||||||      ||||||  |||||||||||| |||||||||||||||||||||    
T  28156111 accggcttgtaaggtgaggattgcctcctctttataaactct------gagtcttgtctatccgatgtgggacttgggtttttcccaata 28156028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 233 - 313
Target Start/End: Complemental strand, 39268089 - 39268009
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    |||||||| | || ||||| |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  39268089 aaggtgaggagtgcctcctatttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaataa 39268009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 312
Target Start/End: Complemental strand, 15287168 - 15287045
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||| |||||| ||||||  |||||||||||  ||| |||||||| |||| ||||| || ||| || ||  |||||||||| |||||||||||    
T  15287168 tgttgaaattttgggtctaactcatcattacaaaaccggcttgtaaggtgaggattgcctcctcttaatatacccttctcaagagtcttatctatccgat 15287069  T
Q  289 gtaggacttgggtttttcccaata 312  Q
     |||||||||||||||||||||||    
T  15287068 ataggacttgggtttttcccaata 15287045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 254 - 312
Target Start/End: Original strand, 18107532 - 18107590
Alignment:
Q  254 ttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  18107532 ttataaactctcatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 18107590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 30330745 - 30330643
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 307  Q
    |||||| |||||||||||| |||| |||||||| |||| ||||| | |||||||||| ||  ||||||| ||||||||||||| |||||||| |||||||    
T  30330745 actcatccttacaaaaccggtttgtaaggtgaggattgcctcctctatataaactctaattcagagtcttatctatccgatgtgggacttggatttttcc 30330646  T
Q  308 caa 310  Q
    |||    
T  30330645 caa 30330643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 36878397 - 36878318
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| |||||||||| |||||||||||| ||||| ||||| ||||||| ||||| |||||| ||||||||||||||    
T  36878397 aaggtgaggattgtctcctgtttataaactcttatcaaaagtcttatctatctgatgtgggactttggtttttcccaata 36878318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 38131879 - 38131772
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | |||||||| ||||||||||||  |||||||||  |||||||||||    
T  38131879 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggaatgtctcctctttataaactcttctcaagagtcctatctatccgat 38131780  T
Q  289 gtaggact 296  Q
    || |||||    
T  38131779 gtgggact 38131772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 198 - 312
Target Start/End: Complemental strand, 18107939 - 18107825
Alignment:
Q  198 ttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 297  Q
    ||||||||| | |||| |||||||||||| |||  |||||||| | || ||||| |||||||| ||| ||||||||||| ||| || |||||| ||| ||    
T  18107939 ttggggtctaattcatccttacaaaaccggtttataaggtgaggagtgcctcctctttataaattcttatcaagagtcttatcgattcgatgtgggaatt 18107840  T
Q  298 gggtttttcccaata 312  Q
    |||||||||||||||    
T  18107839 gggtttttcccaata 18107825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 244 - 310
Target Start/End: Complemental strand, 32501271 - 32501205
Alignment:
Q  244 tgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaa 310  Q
    ||||||||||||| ||||||| ||||||||||| ||||||||||||| |||||||| ||||||||||    
T  32501271 tgtctcctttttacaaactcttatcaagagtcttatctatccgatgtgggacttggatttttcccaa 32501205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 187 - 312
Target Start/End: Complemental strand, 11632548 - 11632423
Alignment:
Q  187 cctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccg 286  Q
    ||||||| ||||||||| |  |||||| ||||||||||||  ||  |||||||| |||| ||| | ||||||||||||  ||||||||||  ||||||||    
T  11632548 cctgttgaaatttggggcccaactcatccttacaaaaccggcttataaggtgaggattgcctcatctttataaactcttctcaagagtcttgtctatccg 11632449  T
Q  287 atgtaggacttgggtttttcccaata 312  Q
    |||| |||||||| ||||| ||||||    
T  11632448 atgtgggacttggattttttccaata 11632423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 37656731 - 37656844
Alignment:
Q  199 tggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttg 298  Q
    ||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| |||||||||||||  ||||||    
T  37656731 tggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgagacttg 37656830  T
Q  299 ggtttttcccaata 312  Q
     |||||| ||||||    
T  37656831 agttttttccaata 37656844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 37781843 - 37781956
Alignment:
Q  199 tggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttg 298  Q
    ||||| || |||||| |||||||||||   ||| |||||||| |||| ||||| |||||| |||||  |||||||||| |||||||||||||  ||||||    
T  37781843 tggggcctaactcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgagacttg 37781942  T
Q  299 ggtttttcccaata 312  Q
     |||||||||||||    
T  37781943 agtttttcccaata 37781956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 312
Target Start/End: Complemental strand, 395463 - 395359
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 307  Q
    ||||||||||||||||||||  || ||||| || | || ||||| |||||||||||| ||||||| ||  |||||||| |||| |||||||||| |||||    
T  395463 actcattcttacaaaaccgacatgtaaggttaggagtgcctcctatttataaactcttatcaagaatcctatctatccaatgtgggacttgggtctttcc 395364  T
Q  308 caata 312  Q
    |||||    
T  395363 caata 395359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 312
Target Start/End: Complemental strand, 39268322 - 39268218
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 307  Q
    |||||| |||| ||||||| ||   |||||||| | || ||||  |||||||||||| ||||||||| | ||||||||||||| ||||||||||||||||    
T  39268322 actcatccttaaaaaaccggttcataaggtgaggagtgcctccaatttataaactcttatcaagagttttatctatccgatgtgggacttgggtttttcc 39268223  T
Q  308 caata 312  Q
    |||||    
T  39268222 caata 39268218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 163 - 312
Target Start/End: Original strand, 36307885 - 36308034
Alignment:
Q  163 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 261  Q
    |||| ||||||| ||| ||| ||||| ||||| |||||| ||  | |||||| |||||||| |||  |||||||||||| |||| ||||| |||||||||    
T  36307885 ccttgaattcgacaagctctgataccatgttgaaatttgaggcttaactcatccttacaaatccggcttgcaaggtgaggattgactcctctttataaac 36307984  T
Q  262 tctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||  |||||||||| ||||||||||||| | |||||  ||||| ||||||    
T  36307985 tct-ttcaagagtcttatctatccgatgtggaacttgaattttttccaata 36308034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 312
Target Start/End: Original strand, 22732752 - 22732849
Alignment:
Q  215 cttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||||||||||| ||   ||||||| | ||||| || ||||||||||||||||| ||||||||||||||||||||  || |||| |||||| |||||    
T  22732752 cttacaaaaccgacttttgaggtgaggagtgtcttctctttataaactctcatcaggagtctcatctatccgatgtgagatttggatttttctcaata 22732849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 188 - 296
Target Start/End: Complemental strand, 13844129 - 13844021
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    |||||| ||||| ||| || |||||| |||||||||||| |||| |||||||||| || ||||| ||||||||||||  ||||||||   ||||||| ||    
T  13844129 ctgttgaaatttagggcctaactcatccttacaaaaccgttttgtaaggtgagaagtgcctcctctttataaactcttctcaagagtactatctatcaga 13844030  T
Q  288 tgtaggact 296  Q
    ||| |||||    
T  13844029 tgtgggact 13844021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 188 - 312
Target Start/End: Complemental strand, 28156354 - 28156231
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    |||||| |||||||| ||| |||||| |||||| ||||   ||| |||||||| |||| ||||| ||||||||||||  |||||||| |   | ||||||    
T  28156354 ctgttgaaatttgggttctaactcatccttacataaccagcttgtaaggtgaggattgcctcctctttataaactcttctcaagagt-tttgccatccga 28156256  T
Q  288 tgtaggacttgggtttttcccaata 312  Q
    ||| |||||||||||||||||||||    
T  28156255 tgtgggacttgggtttttcccaata 28156231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 10668431 - 10668352
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| | |||||||| ||| |||||||| ||||||||| | ||||||  ||||| |||||||||||||||||||||    
T  10668431 aaggtgaggagtgtctcctctttgtaaactcttatcaagagttttatctatttgatgtgggacttgggtttttcccaata 10668352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 234 - 304
Target Start/End: Complemental strand, 17135589 - 17135519
Alignment:
Q  234 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttt 304  Q
    ||||||| | |||||||| |||||||||||| ||||||||||| || |||||||||| ||||||| |||||    
T  17135589 aggtgaggagtgtctcctctttataaactcttatcaagagtcttatttatccgatgtgggacttgagtttt 17135519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 233 - 311
Target Start/End: Original strand, 18873227 - 18873305
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaat 311  Q
    |||||||| |||| ||||| | |||||||||| ||||| ||||| ||||||||||||| |||| |||| ||||||||||    
T  18873227 aaggtgaggattgcctcctctatataaactcttatcaatagtcttatctatccgatgtgggacatgggcttttcccaat 18873305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 233 - 314
Target Start/End: Original strand, 4563724 - 4563805
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaa 314  Q
    |||||||| |||||||||| | | |||||||| ||||| ||||| |||||||||||||  ||| || |||||||||||||||    
T  4563724 aaggtgaggattgtctcctctatgtaaactcttatcaaaagtcttatctatccgatgtgagacatgagtttttcccaataaa 4563805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 247 - 312
Target Start/End: Original strand, 17130036 - 17130096
Alignment:
Q  247 ctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||| ||||||||||||||||||||||||     ||||||||| |||||||||||||||||||||    
T  17130036 ctcctatttataaactctcatcaagagtct-----atccgatgtgggacttgggtttttcccaata 17130096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 296
Target Start/End: Complemental strand, 29432521 - 29432420
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    |||||| || || |||||| ||||||||||||  ||| |||||||||| || ||||| |||||||||||| ||||||||||  ||||| || |||| |||    
T  29432521 aatttgtggcctaactcatccttacaaaaccggcttgtaaggtgagaagtgcctcctctttataaactcttatcaagagtcctatctaaccaatgtggga 29432422  T
Q  295 ct 296  Q
    ||    
T  29432421 ct 29432420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 37995629 - 37995730
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   ||||||||||||| |||    
T  37995629 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggaatgcctcctctttataaactcttctcaagagtgctatctatccgatgtggga 37995728  T
Q  295 ct 296  Q
    ||    
T  37995729 ct 37995730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 224
Target Start/End: Original strand, 35527114 - 35527202
Alignment:
Q  137 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaac 224  Q
    |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||||||||||||| || || ||| ||||||||||    
T  35527114 ttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgtaatttggggcctaacacatccttacaaaac 35527202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 873685 - 873792
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| |||||||||||   ||| |||||||| | || ||||| | ||||||||||  |||||||||  |||||||||||    
T  873685 tgttgaaatttggggcctaactcatccttacaaaacctgcttgtaaggtgaggaatgcctcctctctataaactcttctcaagagtcctatctatccgat 873784  T
Q  289 gtaggact 296  Q
    || |||||    
T  873785 gtgggact 873792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 1028082 - 1028189
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || ||||||  | ||||||||| |||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||||||    
T  1028082 tgttgaaatttggggcctaactcatcgtcacaaaaccggtttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgat 1028181  T
Q  289 gtaggact 296  Q
    || |||||    
T  1028182 gtgggact 1028189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 5127946 - 5128025
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| |||  ||||||||||||||||||  ||||||| ||  |||||||||||||| |||||| ||||| ||||||    
T  5127946 aaggtgaggattacctcctttttataaactcttctcaagagccttgtctatccgatgtagaacttggattttttccaata 5128025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 312
Target Start/End: Complemental strand, 2716652 - 2716538
Alignment:
Q  198 ttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 297  Q
    |||||| || |||||| ||||||||||||  ||  |||||||| | || |||||  ||||||||||| ||||||||||  || ||||| || | ||||||    
T  2716652 ttggggcctaactcatccttacaaaaccggcttataaggtgaggagtgcctcctccttataaactcttatcaagagtcatatttatccaatctgggactt 2716553  T
Q  298 gggtttttcccaata 312  Q
    |||| ||||||||||    
T  2716552 gggtatttcccaata 2716538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 4296654 - 4296779
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctc--atctatccg 286  Q
    ||||| |||||  ||||| |||||| ||||| |||| || ||| |||||||| |||| ||||| |||||| |||||  |||||||||||  ||||||||     
T  4296654 tgttgaaattttaggtctaactcatccttaccaaactgacttgtaaggtgaggattgcctcctctttatatactcttctcaagagtctcttatctatcca 4296753  T
Q  287 atgtaggacttgggtttttcccaata 312  Q
    | ||  ||||||||||||| ||||||    
T  4296754 aggtgagacttgggttttttccaata 4296779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 13413823 - 13413782
Alignment:
Q  271 gagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||| ||||||||||||| |||||||||||||||||||||    
T  13413823 gagtcttatctatccgatgtgggacttgggtttttcccaata 13413782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 255 - 312
Target Start/End: Complemental strand, 29008121 - 29008064
Alignment:
Q  255 tataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||||  ||||||||||| ||||||||||||| | || ||||||||||||||||    
T  29008121 tataaactcctatcaagagtcttatctatccgatgtggaacatgggtttttcccaata 29008064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 189 - 290
Target Start/End: Original strand, 40168848 - 40168949
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| |||||||||||   ||| ||| |||| |||| ||||| |||||| |||||  |||||||||| ||||||| |||    
T  40168848 tgttgaaatttggggcctaactcatccttacaaaaccagcttgtaagatgaggattgcctcctctttatatactcttctcaagagtcttatctatctgat 40168947  T
Q  289 gt 290  Q
    ||    
T  40168948 gt 40168949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 296
Target Start/End: Original strand, 22196561 - 22196649
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 296  Q
    |||||| ||||||||||||  ||| | |||||  | |||||||| ||||||||||||  |||||||||  ||||||||||||| |||||    
T  22196561 actcatccttacaaaaccggcttgtacggtgatgagtgtctcctctttataaactcttctcaagagtcatatctatccgatgtgggact 22196649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 264
Target Start/End: Complemental strand, 24994185 - 24994109
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactct 264  Q
    |||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||    
T  24994185 ctgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgagtagtgcctcctctttataaactct 24994109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 306
Target Start/End: Original strand, 35527199 - 35527247
Alignment:
Q  258 aaactctcatcaagagtctcatctatccgatgtaggacttgggtttttc 306  Q
    |||||||  |||||||||| ||||||||||||| |||||||||||||||    
T  35527199 aaactcttctcaagagtcttatctatccgatgtgggacttgggtttttc 35527247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 38663356 - 38663276
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtc 275  Q
    ||||||||| || |||||| ||||||||||||  ||| |||||||  | || ||||| |||||||||||| ||||||||||    
T  38663356 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgacgagtgcctcctctttataaactcttatcaagagtc 38663276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 13843812 - 13843705
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |  | ||||| ||||||||||||  ||||||||   ||||||| |||    
T  13843812 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagcgcctcctctttataaactcttctcaagagtactatctatctgat 13843713  T
Q  289 gtaggact 296  Q
    || |||||    
T  13843712 gtgggact 13843705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 271
Target Start/End: Original strand, 12965235 - 12965317
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaag 271  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | ||  |||| |||||||||||| ||||||    
T  12965235 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaactctgatcaag 12965317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 312
Target Start/End: Complemental strand, 15286963 - 15286845
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctccttttta-taaactctcatcaagagtctcatctatccgatgtagg 293  Q
    |||||||||||| | |||| |||||||||||   ||| || ||||| ||||  |||| || | || |||||  |||||||||| |||||||||||||  |    
T  15286963 aatttggggtctaattcatccttacaaaaccagcttgtaaagtgaggattgcatcctcttaaatatactcttctcaagagtcttatctatccgatgtgag 15286864  T
Q  294 acttgggtttttcccaata 312  Q
    |||||| ||||||||||||    
T  15286863 acttggatttttcccaata 15286845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 30870918 - 30870992
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 307  Q
    |||||||| ||||  |||| ||||||||||||  |||||| ||| ||||||||||||| | | ||||||||||||    
T  30870918 aaggtgaggattgcttcctctttataaactcttctcaagaatcttatctatccgatgtggaatttgggtttttcc 30870992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 285
Target Start/End: Original strand, 1892098 - 1892175
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatcc 285  Q
    |||||| ||||||||||||  ||| |||||||| |  | ||||| |||||||| ||||||||||||||  ||||||||    
T  1892098 actcatccttacaaaaccggcttgtaaggtgaggagggcctcctctttataaattctcatcaagagtcctatctatcc 1892175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 6918927 - 6918988
Alignment:
Q  165 ttaaattcgataagttctaatacctgttgtaatttggggtctgactcattcttacaaaaccg 226  Q
    |||||||||| ||| |||||||| ||||| ||||||||| || ||||||  |||||||||||    
T  6918927 ttaaattcgacaagctctaatacatgttgaaatttggggcctaactcatatttacaaaaccg 6918988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 6919174 - 6919235
Alignment:
Q  165 ttaaattcgataagttctaatacctgttgtaatttggggtctgactcattcttacaaaaccg 226  Q
    |||||||||| ||| |||||||| ||||| ||||||||| || ||||||  |||||||||||    
T  6919174 ttaaattcgacaagctctaatacatgttgaaatttggggcctaactcatatttacaaaaccg 6919235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 264
Target Start/End: Complemental strand, 24918270 - 24918201
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactct 264  Q
    ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||    
T  24918270 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgagtagtgcctcctctttataaactct 24918201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 312
Target Start/End: Complemental strand, 1893844 - 1893780
Alignment:
Q  248 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||| |||||||||||| ||||||||||  |||||||| || |  |||||| |||||||||||||    
T  1893844 tcctctttataaactcttatcaagagtcgtatctatccaatatgagacttgagtttttcccaata 1893780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 198 - 310
Target Start/End: Complemental strand, 2716449 - 2716337
Alignment:
Q  198 ttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 297  Q
    |||||| || |||||| |||||||||||   ||  |||||||| | |||||||| |||||||||| | ||||| |||   |||||| |||||  ||||||    
T  2716449 ttggggcctaactcatccttacaaaaccagcttataaggtgaggagtgtctcctctttataaacttttatcaacagtaatatctattcgatgggggactt 2716350  T
Q  298 gggtttttcccaa 310  Q
     ||||||||||||    
T  2716349 tggtttttcccaa 2716337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 24792124 - 24792184
Alignment:
Q  202 ggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaact 262  Q
    ||||| |||||||||||||||||||  ||| | |||||| | |||||||| ||||||||||    
T  24792124 ggtctaactcattcttacaaaaccggcttgtacggtgaggagtgtctcctctttataaact 24792184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 40961820 - 40961748
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttttt 305  Q
    |||||||||| ||||||||  ||||||||||| ||||| ||||| ||||||| ||| | | ||||| ||||||    
T  40961820 aaggtgagaagtgtctcctcgttataaactcttatcaaaagtcttatctatctgatatggaacttgagttttt 40961748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 4e-39; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 127 - 312
Target Start/End: Original strand, 16876936 - 16877122
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  16876936 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 16877035  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| |||||||||||||||||||||    
T  16877036 ggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 16877122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 188 - 312
Target Start/End: Complemental strand, 28149909 - 28149785
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    |||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||||||||| ||||||||| | ||||||||||    
T  28149909 ctgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttatcaagagttttatctatccga 28149810  T
Q  288 tgtaggacttgggtttttcccaata 312  Q
    ||| |||| ||||||||||||||||    
T  28149809 tgtgggacatgggtttttcccaata 28149785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 189 - 312
Target Start/End: Complemental strand, 26098869 - 26098746
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || ||||||||||||||||||| ||   |||||||| | |||||||| |||||||||| | |||| |||||| ||| |||||||    
T  26098869 tgttgaaatttggggcctaactcattcttacaaaaccggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttatcaatccgat 26098770  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    ||||||||||||||||||||||||    
T  26098769 gtaggacttgggtttttcccaata 26098746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 15102613 - 15102737
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccga-tttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||||  | ||||| | || ||||| |||||||||||||||||||||||||||||||  ||    
T  15102613 tgttgaaatttggggtctaactcatccttacaaaaccggctttgtgaagtgaggagtgcctcctctttataaactctcatcaagagtctcatctatttga 15102712  T
Q  288 tgtaggacttgggtttttcccaata 312  Q
    ||| |||||||||||||||||||||    
T  15102713 tgtgggacttgggtttttcccaata 15102737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 15102743 - 15102863
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||||||||  |||||| |||||||||||| ||||  | ||||| | || ||||| |||||||||||||||||||||||||||||||| |||    
T  15102743 tgttgaaatttggggtc--actcatccttacaaaaccggtttgtgaagtgaggagtgactcctctttataaactctcatcaagagtctcatctatctgat 15102840  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||||||||||||||||||    
T  15102841 gt-ggacttgggtttttcccaata 15102863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 312
Target Start/End: Complemental strand, 25999138 - 25999015
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || ||||||||||||||||||| ||   |||||||| | |||||||| |||||||||| | |||| |||||| ||| |||||||    
T  25999138 tgttgaaatttggggcctaactcattcttacaaaaccggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttatcaatccgat 25999039  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||||||||||||||||||    
T  25999038 gtgggacttgggtttttcccaata 25999015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 11313371 - 11313494
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| |||||||||| |  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| |||||||||||    
T  11313371 tgttgaaatttggggcctaactcatccttacaaaactggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgat 11313470  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || ||| |||||||||||||||||    
T  11313471 gtgggatttgggtttttcccaata 11313494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 15101100 - 15101223
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||| |||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  ||||||||||    
T  15101100 tgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgat 15101199  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||||| ||||||||||||    
T  15101200 gtgggacttggatttttcccaata 15101223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 189 - 312
Target Start/End: Complemental strand, 16590299 - 16590176
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||| || ||||| |||| ||||| |||||||| |||   |||||||||  ||||||||||    
T  16590299 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttataaattcttcccaagagtcttgtctatccgat 16590200  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||||||||||||||||||    
T  16590199 gtgggacttgggtttttcccaata 16590176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 16605081 - 16605204
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||| || ||||| |||| ||||| |||||||| |||   |||||||||  ||||||||||    
T  16605081 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttataaattcttcccaagagtcttgtctatccgat 16605180  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||||||||||||||||||    
T  16605181 gtgggacttgggtttttcccaata 16605204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 189 - 312
Target Start/End: Complemental strand, 26098457 - 26098334
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||| || ||   |||||||| | |||||||| |||||||||| | |||| |||||| |||||||||||    
T  26098457 tgttgaaatttggggcctaactcatccttacaaaagcggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttatctatccgat 26098358  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||||||||||||||||||    
T  26098357 gtgggacttgggtttttcccaata 26098334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 168 - 312
Target Start/End: Complemental strand, 26098685 - 26098540
Alignment:
Q  168 aattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctca 266  Q
    ||||||| ||||||| ||||| ||||| ||||||||| || |||||||||||||||| || ||   |||||||| | |||||||| |||||||||| | |    
T  26098685 aattcgacaagttctgataccatgttgaaatttggggcctaactcattcttacaaaagcggttcataaggtgaggagtgtctcctctttataaactatta 26098586  T
Q  267 tcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||| |||||| ||| |  |||||| |||||||||||||||||||||    
T  26098585 tcatgagtcttatcaagacgatgtgggacttgggtttttcccaata 26098540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 127 - 312
Target Start/End: Complemental strand, 11317019 - 11316835
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| ||  |||  | |||| ||||||| ||| ||| ||||| ||||| |||| |||| || |||||  |||||||||||    
T  11317019 ctctttgggcttggtgcgtgaataggt--aggtggcccttgaattcgacaagctctgataccatgttgaaattgggggcctaactcaaccttacaaaacc 11316922  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |  |||  | ||||| | || | ||| |||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  11316921 ggcttgtgaagtgaggagtgccccctctttataaactctcatcaagagtctcatctatccgatgtggaacttgagtttttcccaata 11316835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 253 - 312
Target Start/End: Complemental strand, 11317099 - 11317040
Alignment:
Q  253 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  11317099 tttataaactctcatcaagagtttcatctatccgatgtgggacttgggtttttcccaata 11317040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 312
Target Start/End: Complemental strand, 25998932 - 25998809
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || | |||| ||||||||| || ||   |||||||| | |||||||| |||||||||| | |||| |||||| |||||||||||    
T  25998932 tgttgaaatttggggcctaaatcatccttacaaaagcggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttatctatccgat 25998833  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||||||||||||||||||    
T  25998832 gtgggacttgggtttttcccaata 25998809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 290
Target Start/End: Original strand, 5269262 - 5269363
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||||||||| |||||| |||||| ||||||||||||  ||| |||||||| |||| || || ||||||||||||  |||||||||| |||||||||||    
T  5269262 tgttgtaatttagggtctaactcatccttacaaaaccggcttgtaaggtgaggattgccttctctttataaactcttctcaagagtcttatctatccgat 5269361  T
Q  289 gt 290  Q
    ||    
T  5269362 gt 5269363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 195 - 312
Target Start/End: Complemental strand, 24558692 - 24558575
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    ||||||||| || |||||| || |||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| ||||||| ||||| |||    
T  24558692 aatttggggcctaactcatcctcacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatctgatgtggga 24558593  T
Q  295 cttgggtttttcccaata 312  Q
    ||||| ||||||||||||    
T  24558592 cttggatttttcccaata 24558575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 19291907 - 19292023
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||| | || |||||| ||||||||||| | ||  |||||||| |||||||||| | || ||||||| ||||||||||| |||||||||||    
T  19291907 tgttgaaatttggagcctaactcatccttacaaaaccaacttataaggtgaggattgtctcctctatacaaactcttatcaagagtcttatctatccgat 19292006  T
Q  289 gtaggacttgggttttt 305  Q
    || |||||| |||||||    
T  19292007 gtgggactttggttttt 19292023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 188 - 312
Target Start/End: Complemental strand, 24558904 - 24558780
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    |||||| ||||||||| || |||||| |||||||||||   ||| |||||||| |||||||||| ||||||||||||  | |||||||| ||||||||||    
T  24558904 ctgttgaaatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggattgtctcctctttataaactcttctaaagagtcttatctatccga 24558805  T
Q  288 tgtaggacttgggtttttcccaata 312  Q
    |||  ||| | ||||||| ||||||    
T  24558804 tgtgagacataggttttttccaata 24558780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 10418327 - 10418434
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||||||||||||   |||||||||||    
T  10418327 tgttggaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctcatcaagagtgctatctatccgat 10418426  T
Q  289 gtaggact 296  Q
    || |||||    
T  10418427 gtgggact 10418434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 183 - 296
Target Start/End: Original strand, 12134466 - 12134579
Alignment:
Q  183 aatacctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatcta 282  Q
    |||| |||||| ||||||||| || |||||| |||||||||||| |||| ||||| || | |||||||| ||||||||||||  ||||||||   |||||    
T  12134466 aataactgttgaaatttggggcctaactcatccttacaaaaccggtttgtaaggttaggagtgtctcctctttataaactcttctcaagagtgctatcta 12134565  T
Q  283 tccgatgtaggact 296  Q
    |||||||| |||||    
T  12134566 tccgatgtgggact 12134579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 189 - 306
Target Start/End: Original strand, 16876819 - 16876936
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||||||| |  ||||||||||  ||||||| ||    
T  16876819 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactattctcaagagtcttgtctatcctat 16876918  T
Q  289 gtaggacttgggtttttc 306  Q
    || |||||||| ||||||    
T  16876919 gtgggacttggatttttc 16876936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 163 - 287
Target Start/End: Original strand, 19712571 - 19712696
Alignment:
Q  163 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 261  Q
    |||| ||||||| ||||||| ||||| ||||||||||||||| || |||||| |||||||||||   ||| |||||||| |||| ||||| |||||||||    
T  19712571 ccttgaattcgacaagttctgataccatgttgtaatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttataaac 19712670  T
Q  262 tctcatcaagagtctcatctatccga 287  Q
    |||  ||||||||   ||||||||||    
T  19712671 tcttctcaagagtgctatctatccga 19712696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 6623443 - 6623539
Alignment:
Q  218 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaa 314  Q
    |||||||||  ||| |||||||| |||| | ||  |||||| |||||  |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  6623443 acaaaaccggcttgtaaggtgaggattgcccccactttatatactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaataaa 6623539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 309
Target Start/End: Complemental strand, 30526889 - 30526832
Alignment:
Q  253 tttataaactctcatcaagagtctcatctatccgatgtaggac-ttgggtttttccca 309  Q
    |||||||||||||||||||||||||||||||||||||| |||| || |||||||||||    
T  30526889 tttataaactctcatcaagagtctcatctatccgatgtgggactttaggtttttccca 30526832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 253 - 309
Target Start/End: Complemental strand, 30539471 - 30539415
Alignment:
Q  253 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttccca 309  Q
    |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||||||    
T  30539471 tttataaactcttatcaaaagtcttatctatccgatgtgggacttgggtttttccca 30539415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 19054608 - 19054501
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||| | ||||||||||||  |||||||| | |||||||||||    
T  19054608 tgttgaaatttggggactaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcatctttataaactcttctcaagagtgttatctatccgat 19054509  T
Q  289 gtaggact 296  Q
    || |||||    
T  19054508 gtgggact 19054501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 19712393 - 19712516
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||| ||  ||| |||||| | |||| |||||  ||||||||| |  |||||||||| |||||||||||    
T  19712393 tgttgaaatttggggcctaactcatccttacaaaatcggcttgtaaggtggggattgcctcctccttataaactattctcaagagtcttatctatccgat 19712492  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || | || ||| ||||||||||||    
T  19712493 gtggaacatggatttttcccaata 19712516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 26394622 - 26394543
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| |||| ||||| | |||||||||| ||||||||||| ||||||||||||| | || || |||||||||||||    
T  26394622 aaggtgaggattgcctcctctatataaactcttatcaagagtcttatctatccgatgtggaacatgagtttttcccaata 26394543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 30539350 - 30539243
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| ||   |||| ||||||||||||  ||| |||||||| | ||||||   |||||||||||| ||||||||||| |||||||||||    
T  30539350 tgttgaaatttggggcctagttcatccttacaaaaccggcttgtaaggtgaggagtgtctcgcctttataaactcttatcaagagtcttatctatccgat 30539251  T
Q  289 gtaggact 296  Q
    || |||||    
T  30539250 gtgggact 30539243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 195 - 313
Target Start/End: Original strand, 15293869 - 15293987
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    |||||||||||| | |||| |||| |||||||  |||  ||||||| | ||||||   |||||||||||||||||||| ||| ||||||| ||||   ||    
T  15293869 aatttggggtctaattcatccttataaaaccggcttgtgaggtgaggaatgtctctgctttataaactctcatcaagaatctaatctatctgatgcgaga 15293968  T
Q  295 cttgggtttttcccaataa 313  Q
    |||| ||||||||||||||    
T  15293969 cttgagtttttcccaataa 15293987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 18494407 - 18494501
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttaca 220  Q
    ||||||||| |||||||||||||| |||||||||| |||| ||||||| ||| ||| ||||| ||||| |||| |||| || |||||| ||||||    
T  18494407 ctctttaggcttggtgcgtgaataggtttaggcagcccttgaattcgacaagctctgataccatgttgaaattgggggcctaactcatccttaca 18494501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 305
Target Start/End: Complemental strand, 2902902 - 2902819
Alignment:
Q  220 aaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttttt 305  Q
    |||||||| ||| ||||||||| | ||||||| || ||||||||| || |||||||| ||||||||||||||||||||| ||||||    
T  2902902 aaaaccgacttgtaaggtgagagt-gtctcctctt-ataaactcttatgaagagtcttatctatccgatgtaggacttgagttttt 2902819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 296
Target Start/End: Complemental strand, 8144126 - 8144025
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   ||||||||||||| |||    
T  8144126 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgatgtggga 8144027  T
Q  295 ct 296  Q
    ||    
T  8144026 ct 8144025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 10733433 - 10733534
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    ||||||||| || |||||| ||||||||||||  ||| |||||||| | |||||||| ||||||||||||  |||||||| | |||| ||| |||| |||    
T  10733433 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgtctcctctttataaactcttctcaagagtgttatctgtccaatgtggga 10733532  T
Q  295 ct 296  Q
    ||    
T  10733533 ct 10733534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 1744831 - 1744938
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||| ||    
T  1744831 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttttcaagagtactatctatccaat 1744930  T
Q  289 gtaggact 296  Q
    || |||||    
T  1744931 gtgggact 1744938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 24055098 - 24055205
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||| | ||||||||||||  ||||||||   |||||||||||    
T  24055098 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcgtctttataaactcttctcaagagtgctatctatccgat 24055197  T
Q  289 gtaggact 296  Q
    || |||||    
T  24055198 gtgggact 24055205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 312
Target Start/End: Original strand, 18494284 - 18494386
Alignment:
Q  210 tcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttccca 309  Q
    |||| ||||||||||||  ||| ||| |||| |||| ||||| |||||||| | |  ||||||||||  |||||| ||||| ||| ||||||||||||||    
T  18494284 tcatccttacaaaaccggcttgtaagatgaggattgcctcctctttataaattattctcaagagtcttgtctatctgatgtgggatttgggtttttccca 18494383  T
Q  310 ata 312  Q
    |||    
T  18494384 ata 18494386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 31926 - 31969
Alignment:
Q  253 tttataaactctcatcaagagtctcatctatccgatgtaggact 296  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||    
T  31926 tttataaactcttatcaagagtcttatctatccgatgttggact 31969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 25184089 - 25184018
Alignment:
Q  218 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatg 289  Q
    |||||||||  ||| | |||||| ||||||| || |||||||||||| ||||||| ||| ||||||||||||    
T  25184089 acaaaaccggcttgtacggtgaggattgtcttctctttataaactcttatcaagaatcttatctatccgatg 25184018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 312
Target Start/End: Original strand, 12124760 - 12124806
Alignment:
Q  266 atcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||| ||||||||||||| ||||| |||||| ||||||||||||||    
T  12124760 atcaatagtctcatctatctgatgtgggacttaggtttttcccaata 12124806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 263
Target Start/End: Original strand, 17147894 - 17147968
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactc 263  Q
    ||||| |||||| || || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||||||||    
T  17147894 tgttgaaatttgtggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactc 17147968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 22911485 - 22911539
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctc 249  Q
    ||||| |||||| |||||||||||||||||||| ||| |||||||| | ||||||    
T  22911485 aatttagggtctaactcattcttacaaaaccgacttgtaaggtgaggagtgtctc 22911539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 312
Target Start/End: Original strand, 2923011 - 2923068
Alignment:
Q  255 tataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||||| ||||||||||  |||||||||| || |||| || |||||||||||||    
T  2923011 tataaactcttatcaagagtcatatctatccgacgtgggacatgagtttttcccaata 2923068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 290
Target Start/End: Original strand, 17096687 - 17096788
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||| | || ||| | | |||||| ||||||||||||  |||||| ||  |||||| ||||    
T  17096687 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtacggcgaggagtttctcctctttataaactcttctcaagactcctatctattcgat 17096786  T
Q  289 gt 290  Q
    ||    
T  17096787 gt 17096788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 28072467 - 28072568
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    |||||||||| | ||||||| ||||||| || | ||| ||| |||| | | |||||| ||||||||||||  ||||| |||| ||||| ||||||| |||    
T  28072467 aatttggggtataactcattgttacaaatccaacttgtaagatgaggagtatctcctctttataaactcttgtcaagcgtcttatctaaccgatgtggga 28072566  T
Q  295 ct 296  Q
    ||    
T  28072567 ct 28072568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 312
Target Start/End: Complemental strand, 30527083 - 30527034
Alignment:
Q  263 ctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||||||| ||||||||||||||| ||||||| ||| || ||||||    
T  30527083 ctcatcaagagtttcatctatccgatgtgggacttgagttgtttccaata 30527034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 271
Target Start/End: Original strand, 27914321 - 27914397
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaag 271  Q
    ||||||||| || |||||| ||||||||||||  ||| ||||| || | || ||||| |||||||||||| ||||||    
T  27914321 aatttggggcctaactcatccttacaaaaccggcttgtaaggtaaggagtgcctcctctttataaactctgatcaag 27914397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 29742469 - 29742546
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| |||| ||||| |||||||||| |||||||||||||  |  ||||||||| ||||||  |||||||| ||||    
T  29742469 aaggtgaggattgcctcctctttataaactttcatcaagagtct--taaatccgatgtgggacttaagtttttcctaata 29742546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 4e-39; HSPs: 91)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 127 - 312
Target Start/End: Original strand, 12016817 - 12017003
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||| ||||||| ||||||||||||||| ||||||| ||| ||| ||||| ||||| |||| |||| || |||||| |||||||||||    
T  12016817 ctctttgggcttggtgtgtgaataggtttaggcagtccttgaattcgacaagctctgataccatgttgaaattgggggcctaactcatccttacaaaacc 12016916  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| |||||||||||||||||||||    
T  12016917 ggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 12017003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 127 - 312
Target Start/End: Original strand, 17077072 - 17077256
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    ||||||||| |||||||||||||| ||  |||  | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||  |||||||||||    
T  17077072 ctctttaggcttggtgcgtgaataggt--aggtggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcaaccttacaaaacc 17077169  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |  ||||||||||||  ||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17077170 ggcttgcaaggtgagggttgcctcctctttatgaactctcatcaagagtctcatctatccgatgtgggacttgggtttttcccaata 17077256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 198 - 312
Target Start/End: Complemental strand, 28246099 - 28245985
Alignment:
Q  198 ttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 297  Q
    |||||| || |||||| |||||||||||| ||||||||||||| |||| || || |||||||||||||||||||||||||||||||||||||| ||||||    
T  28246099 ttggggcctaactcatccttacaaaaccggtttgcaaggtgaggattgccttctctttataaactctcatcaagagtctcatctatccgatgtgggactt 28246000  T
Q  298 gggtttttcccaata 312  Q
    |||||||||||||||    
T  28245999 gggtttttcccaata 28245985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 127 - 313
Target Start/End: Complemental strand, 28245964 - 28245782
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| ||||||||||||||||| ||  |||  | |||| ||||||| ||| ||| ||||| ||||| |||| |||| || |||||| |||||||||||    
T  28245964 ctctttgggtttggtgcgtgaataggt--aggtggcccttgaattcgacaagctctgataccatgttgaaattgggggcctaactcatccttacaaaacc 28245867  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    |  |||||||||||| |||| ||||| |||||||||||||||   |||||||||||||||||||| ||||||||||||||||||||||    
T  28245866 ggcttgcaaggtgaggattgcctcctctttataaactctcat---gagtctcatctatccgatgtgggacttgggtttttcccaataa 28245782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 17076929 - 17077052
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||  ||||||||||||  |||||| |||||  ||| ||||| ||||| ||||||||||||||||||||||||||||||    
T  17076929 tgttgaaatttggggcctaactcaaccttacaaaaccggcttgcaaagtgagggttgcctcctctttatgaactctcatcaagagtctcatctatccgat 17077028  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||||||||||||||||||    
T  17077029 gtgggacttgggtttttcccaata 17077052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 189 - 313
Target Start/End: Complemental strand, 43943788 - 43943664
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||| |||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| |||||||||||    
T  43943788 tgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgat 43943689  T
Q  289 gtaggacttgggtttttcccaataa 313  Q
    || ||||||||||||||||||||||    
T  43943688 gtgggacttgggtttttcccaataa 43943664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 25753594 - 25753717
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||  || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||||||||| |||||||||||  ||||||||||    
T  25753594 tgttgaaatttgggacctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttatcaagagtcttgtctatccgat 25753693  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||||||||||||||||||    
T  25753694 gtgggacttgggtttttcccaata 25753717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 27634315 - 27634438
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||||||||||||| || |||||| ||||||||| ||  ||| ||||||||||||| ||||| |||||| |||||  |||||||||| |||||||||||    
T  27634315 tgttgtaatttggggcctaactcatccttacaaaatcggcttgtaaggtgagaattgcctcctctttatatactcttctcaagagtcttatctatccgat 27634414  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||| ||||||||||||||    
T  27634415 gtgggactttggtttttcccaata 27634438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 140 - 312
Target Start/End: Complemental strand, 5488532 - 5488359
Alignment:
Q  140 gtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtg 238  Q
    ||||||||||| |||||||| | |||  || |||| ||| ||| ||| | ||||| |||||| || || |||||| ||||||||||||  ||| ||||||    
T  5488532 gtgcgtgaataggtttaggcggccctagaactcgacaagctctgatatcatgttgaaatttgaggcctaactcatccttacaaaaccggcttgtaaggtg 5488433  T
Q  239 agaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    || |||| ||||| ||||||||||||  |||||||||| || |||||||||| |||||||||||||||||||||    
T  5488432 aggattgcctcctctttataaactcttctcaagagtcttatttatccgatgtgggacttgggtttttcccaata 5488359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 12016672 - 12016795
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||| |||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  ||||||||||    
T  12016672 tgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgat 12016771  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||||||||||||||||||    
T  12016772 gtgggacttgggtttttcccaata 12016795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 189 - 314
Target Start/End: Complemental strand, 28395292 - 28395168
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| |||||||| ||    
T  28395292 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactctt-tcaagagtcttatctatccaat 28395194  T
Q  289 gtaggacttgggtttttcccaataaa 314  Q
    || |||||||||||||||||||||||    
T  28395193 gtgggacttgggtttttcccaataaa 28395168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 188 - 312
Target Start/End: Complemental strand, 29113565 - 29113441
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    |||||| ||||||||| || |||||| |||||||||||   ||| |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||| ||    
T  29113565 ctgttgaaatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatctga 29113466  T
Q  288 tgtaggacttgggtttttcccaata 312  Q
    ||| |||| ||||||||||||||||    
T  29113465 tgtgggacatgggtttttcccaata 29113441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 189 - 312
Target Start/End: Complemental strand, 21498646 - 21498523
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||||||||||||| || |||||| ||||||||||||  ||| |||||||| |||  || || |||||| |||||  ||||||||||  ||||||||||    
T  21498646 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattaccttctctttatatactcttctcaagagtcttgtctatccgat 21498547  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||||||||||||||||||    
T  21498546 gtgggacttgggtttttcccaata 21498523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 189 - 312
Target Start/End: Complemental strand, 53864020 - 53863897
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||| ||||| |||||| |||||||||||| ||   |||||||| | |||||||| |||||||||| | ||||| ||||| |||||||||||    
T  53864020 tgttgaaatttgtggtctaactcatccttacaaaaccggttcataaggtgaggagtgtctcctctttataaactattatcaaaagtcttatctatccgat 53863921  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || ||||||||||||||| |||||    
T  53863920 gttggacttgggtttttctcaata 53863897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 189 - 312
Target Start/End: Complemental strand, 54210492 - 54210369
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||||||||||||| || |||||| ||||||||||||  ||| ||  ||||||||  ||||| |||||| |||||  ||||||||||  ||||||||||    
T  54210492 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaatttgagaattacctcctctttatatactcttctcaagagtcttgtctatccgat 54210393  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||||||||||||||||||    
T  54210392 gtgggacttgggtttttcccaata 54210369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 163 - 312
Target Start/End: Complemental strand, 56511439 - 56511289
Alignment:
Q  163 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 261  Q
    |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||| ||   |||||||| | || ||||| |||||||||    
T  56511439 ccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggttcataaggtgaggagtgcctcctctttataaac 56511340  T
Q  262 tctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||| ||||||||||| |||||  | |||| |||||||||||||||||||||    
T  56511339 tcttatcaagagtcttatctactcaatgtgggacttgggtttttcccaata 56511289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 207 - 311
Target Start/End: Complemental strand, 3055880 - 3055776
Alignment:
Q  207 gactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttc 306  Q
    ||||||| ||||||||||||| ||  |||||||| | ||  |||| |||||||||||||||||||||||  |||||||| |||| |||||||||||||||    
T  3055880 gactcatccttacaaaaccgacttttaaggtgaggagtgcatcctctttataaactctcatcaagagtcctatctatccaatgtgggacttgggtttttc 3055781  T
Q  307 ccaat 311  Q
    |||||    
T  3055780 ccaat 3055776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 208 - 312
Target Start/End: Original strand, 28497222 - 28497326
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 307  Q
    |||||| |||||||||||| ||| ||||  ||  | || ||||| |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||    
T  28497222 actcatccttacaaaaccggtttacaagccgaagagtgcctcctctttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcc 28497321  T
Q  308 caata 312  Q
    |||||    
T  28497322 caata 28497326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 1922980 - 1923103
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||||||||||||| |||| |||||||  ||| | |||||  ||||  |||| ||||||||||||  |||||||||| ||||||| |||    
T  1922980 tgttgaaatttggggtctgactcatccttataaaaccggcttgtatggtgatgattgcttcctctttataaactcttctcaagagtcttatctatctgat 1923079  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||| ||||||||||||||||    
T  1923080 gtgggacatgggtttttcccaata 1923103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 8559960 - 8560083
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||  || ||||| |||| |||||   |||||||||| ||||||||||| |||||||||||    
T  8559960 tgttgaaatttggggtctaactcatccttacaaaaccggcttctaaagtgaggattgcctcctcgatataaactcttatcaagagtcttatctatccgat 8560059  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || ||||||||  |||||||||||    
T  8560060 gtgggacttggacttttcccaata 8560083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 127 - 312
Target Start/End: Complemental strand, 33629835 - 33629651
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| ||  |||  |||||| || |||| ||| ||| ||||| ||||| ||||||||| || ||||||  | ||||||||    
T  33629835 ctctttgggcttggtgcgtgaataggt--aggtggtccttgaagtcgacaagctctgataccatgttgaaatttggggcctaactcatcgtcacaaaacc 33629738  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |  |||  | ||||| | |  ||||| ||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||    
T  33629737 ggcttgtgatgtgaggagtacctcctatttataaactctcatcaagagtctcatctatccaatgtggaacttgggtttttcccaata 33629651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 215 - 312
Target Start/End: Complemental strand, 39110996 - 39110899
Alignment:
Q  215 cttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||||||||||  ||| |||| ||| |||||||||| |||||| |||||  |||||||||| ||||||||||||| ||||||| |||||||||||||    
T  39110996 cttacaaaaccggcttgtaaggcgaggattgtctcctctttatatactcttctcaagagtcttatctatccgatgtgggacttgagtttttcccaata 39110899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 173 - 296
Target Start/End: Complemental strand, 990679 - 990555
Alignment:
Q  173 gataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaag 271  Q
    |||||| ||| ||||| ||||| ||||||||| || |||||| ||||||||||||| ||| |||||||| | || ||||| ||||||||||||  |||||    
T  990679 gataagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccgacttgtaaggtgaggagtgcctcctctttataaactcttctcaag 990580  T
Q  272 agtctcatctatccgatgtaggact 296  Q
    ||| | ||||||||||||| |||||    
T  990579 agtgttatctatccgatgtgggact 990555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 8304988 - 8305067
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| |||||||||| | |||||||||| ||||| ||||| |||||||||||||||||| || |||||||||||||    
T  8304988 aaggtgaggattgtctcctctatataaactcttatcaaaagtcttatctatccgatgtaggacatgagtttttcccaata 8305067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 23350870 - 23350791
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| |||||||||| |||||| ||||| ||||||||||| || |||||||||| ||| |||||||||||||||||    
T  23350870 aaggtgaggattgtctcctctttatatactcttatcaagagtcttatttatccgatgtgggatttgggtttttcccaata 23350791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 189 - 312
Target Start/End: Complemental strand, 56511619 - 56511496
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||| || ||   |||||||| | || ||||| |||||||||||| ||||||||||| |||||  | ||    
T  56511619 tgttgaaatttggggcctaactcatccttacaaaatcggttcataaggtgaggagtgcctcctctttataaactcttatcaagagtcttatctactcaat 56511520  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||||||||||||||||||    
T  56511519 gtgggacttgggtttttcccaata 56511496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 312
Target Start/End: Original strand, 49380898 - 49380992
Alignment:
Q  218 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| |||||||||||||  ||||||| ||||||||||||    
T  49380898 acaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgagacttggatttttcccaata 49380992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 247 - 308
Target Start/End: Complemental strand, 33629978 - 33629917
Alignment:
Q  247 ctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttccc 308  Q
    ||||| ||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||    
T  33629978 ctcctatttataaactctcatcaagagtctcatctatccaatgtgggacttgagtttttccc 33629917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 298
Target Start/End: Original strand, 10390437 - 10390573
Alignment:
Q  163 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 261  Q
    |||| ||||||| ||| ||| ||||| ||||| |||||||||||| |||||| |||||||||| | ||   |||||||| | |||||||| |||||||||    
T  10390437 ccttgaattcgacaagctctgataccatgttgaaatttggggtctaactcatccttacaaaactggttcataaggtgaggaatgtctcctctttataaac 10390536  T
Q  262 tctcatcaagagtctcatctatccgatgtaggacttg 298  Q
    | | |||||||| || |||||||| |||| |||||||    
T  10390537 tattatcaagagacttatctatccaatgtgggacttg 10390573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 313
Target Start/End: Complemental strand, 22865884 - 22865761
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||| |||||| |||||| |||||||||||| ||   |||||||| | || | ||| |||||||||| | |||||| |||| |||||||||||    
T  22865884 tgttgaaatttagggtctaactcatccttacaaaaccggttcataaggtgaggactgccccctctttataaactattatcaagggtcttatctatccgat 22865785  T
Q  289 gtaggacttgggtttttcccaataa 313  Q
    || ||||||| ||||||||||||||    
T  22865784 gt-ggacttgagtttttcccaataa 22865761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 52827237 - 52827337
Alignment:
Q  205 ctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttt 304  Q
    ||||||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||| ||||||||||  |||||||| ||||  ||||||||||||    
T  52827237 ctgactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatctatccaatgtgagacttgggtttt 52827336  T
Q  305 t 305  Q
    |    
T  52827337 t 52827337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 991319 - 991212
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||| |||||||| | || |||||  |||||||||||  |||||||| | |||||||||||    
T  991319 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctcattataaactcttctcaagagtgttatctatccgat 991220  T
Q  289 gtaggact 296  Q
    || |||||    
T  991219 gtgggact 991212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 47491883 - 47491958
Alignment:
Q  237 tgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||| |||| ||||||| |||||||||  ||||||||||| ||||||||||||| |||| ||||||||||||||||    
T  47491883 tgaggattgcctcctttatataaactcctatcaagagtcttatctatccgatgtgggacatgggtttttcccaata 47491958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 290
Target Start/End: Complemental strand, 23018585 - 23018484
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||||||  |||||||||||    
T  23018585 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggaatgcctcctctttataaactcttctcaagagtcatatctatccgat 23018486  T
Q  289 gt 290  Q
    ||    
T  23018485 gt 23018484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 236 - 312
Target Start/End: Complemental strand, 3640274 - 3640198
Alignment:
Q  236 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||| |||||||||| | |||||||||| ||||||||||| |||||||||| || |||| || |||||||||||||    
T  3640274 gtgaggattgtctcctctatataaactcttatcaagagtcttatctatccgacgtgggacatgagtttttcccaata 3640198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 195 - 298
Target Start/End: Original strand, 7892646 - 7892750
Alignment:
Q  195 aatttggggtctgactcattcttacaaaacc-gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagg 293  Q
    |||||||||||| |||||| |||| | |||| |  ||| |||||||| |||||||||| | |||||||||  ||||||||||| ||||||||||||| ||    
T  7892646 aatttggggtctaactcatccttaaagaaccagcgttgtaaggtgaggattgtctcctctatataaactcatatcaagagtcttatctatccgatgtggg 7892745  T
Q  294 acttg 298  Q
    |||||    
T  7892746 acttg 7892750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 226
Target Start/End: Original strand, 27634457 - 27634557
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||||||||||||| || ||||||  ||||||||||    
T  27634457 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgtaatttggggcctaactcatcgttacaaaacc 27634556  T
Q  226 g 226  Q
    |    
T  27634557 g 27634557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 188 - 296
Target Start/End: Original strand, 29669351 - 29669459
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    |||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   ||||||||||    
T  29669351 ctgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccga 29669450  T
Q  288 tgtaggact 296  Q
    ||| |||||    
T  29669451 tgtgggact 29669459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 190 - 290
Target Start/End: Original strand, 45426926 - 45427026
Alignment:
Q  190 gttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatg 289  Q
    |||| ||||||||| || |||||| ||||||||||||| ||| |||||||| | || ||||| ||||||||||||  ||||||||   ||||||||||||    
T  45426926 gttgaaatttggggcctaactcatccttacaaaaccgacttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgatg 45427025  T
Q  290 t 290  Q
    |    
T  45427026 t 45427026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 312
Target Start/End: Complemental strand, 26806615 - 26806503
Alignment:
Q  198 ttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 297  Q
    |||||| || |||||| |||||||||| |  ||| ||| |||| | ||||||  | ||||||||||| ||||||||||  ||||||||||| | ||||||    
T  26806615 ttggggcctaactcatccttacaaaactggcttgtaagttgaggagtgtctc--tcttataaactcttatcaagagtcctatctatccgatttgggactt 26806518  T
Q  298 gggtttttcccaata 312  Q
    |||||||||||||||    
T  26806517 gggtttttcccaata 26806503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 245
Target Start/End: Original strand, 35399342 - 35399461
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||  |||||||||||    
T  35399342 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcaaccttacaaaacc 35399441  T
Q  226 gatttgcaaggtgagaattg 245  Q
    |  ||| |||||||| ||||    
T  35399442 ggcttgtaaggtgaggattg 35399461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 208 - 307
Target Start/End: Complemental strand, 50307372 - 50307273
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 307  Q
    |||||| |||||||||| | ||   |||||||| | || ||||  ||||||||||||  |||||||||| ||||||||||||| ||||||||||||||||    
T  50307372 actcatccttacaaaactggttcataaggtgaggagtgcctccgctttataaactcttgtcaagagtcttatctatccgatgtgggacttgggtttttcc 50307273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 51469596 - 51469489
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| |||||| |||||  ||| |||||||| | || ||||| ||||||||||||  |||||||||  |||||||||||    
T  51469596 tgttgaaatttggggcctaactcatccttacacaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgat 51469497  T
Q  289 gtaggact 296  Q
    || |||||    
T  51469496 gtgggact 51469489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 52214730 - 52214623
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||| ||||||||| | ||||| || ||    
T  52214730 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtattatctacccaat 52214631  T
Q  289 gtaggact 296  Q
    || |||||    
T  52214630 gtgggact 52214623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 264
Target Start/End: Original strand, 53386101 - 53386176
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactct 264  Q
    ||||| |||||| ||||| |||||| ||||||||||||| ||| |||||||| | |||||||| ||||||||||||    
T  53386101 tgttgaaatttgaggtctaactcatccttacaaaaccgacttgtaaggtgaggaatgtctcctctttataaactct 53386176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 53740297 - 53740190
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||||||    
T  53740297 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgat 53740198  T
Q  289 gtaggact 296  Q
    || |||||    
T  53740197 gtgggact 53740190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 42312887 - 42312821
Alignment:
Q  247 ctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    ||||| |||||||||| ||||||||||||||||||||||||| | | ||||| |||||| |||||||    
T  42312887 ctcctctttataaactttcatcaagagtctcatctatccgatatggaacttgagttttttccaataa 42312821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 234 - 312
Target Start/End: Original strand, 45684208 - 45684286
Alignment:
Q  234 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||||| ||||||| || | |||||||| | ||||||||||  ||||||||||||| |||| ||||||||||||||||    
T  45684208 aggtgaggattgtcttctctatataaacttttatcaagagtcgtatctatccgatgtgggacatgggtttttcccaata 45684286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 49380746 - 49380664
Alignment:
Q  218 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttggg 300  Q
    |||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| |||||||| ||||||||| ||||    
T  49380746 acaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccaatgtaggacctggg 49380664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 33629637 - 33629596
Alignment:
Q  271 gagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  33629637 gagtctcatctatccgatgtgggacttgggtttttcccaata 33629596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 33629896 - 33629855
Alignment:
Q  271 gagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  33629896 gagtctcatctatccgatgtgggacttgggtttttcccaata 33629855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 188 - 296
Target Start/End: Complemental strand, 15665269 - 15665161
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    |||||| |||||| || || |||||| ||||||||||||  ||| |||||||| | || ||||| | ||||||||||  |||||||||  ||||||||||    
T  15665269 ctgttgaaatttgaggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctatataaactcttctcaagagtcctatctatccga 15665170  T
Q  288 tgtaggact 296  Q
    ||| |||||    
T  15665169 tgtgggact 15665161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 304
Target Start/End: Complemental strand, 20093428 - 20093332
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttt 304  Q
    |||||| ||||||||||||||||  |||||||||| ||  | || |||||||| ||| ||||||||||| || |||| |||||| |||||| |||||    
T  20093428 actcatccttacaaaaccgatttataaggtgagaagtgcattctctttataaattcttatcaagagtcttatttatctgatgtaagacttgagtttt 20093332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 312
Target Start/End: Original strand, 33797117 - 33797221
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 307  Q
    |||||| ||||| ||||||  ||| |||||||| | || ||| | |||||||||||| ||||||||||  |||||||| |||| ||| | ||||||||||    
T  33797117 actcatccttacgaaaccggcttggaaggtgaggagtgcctcgtctttataaactcttatcaagagtcctatctatccaatgtgggattcgggtttttcc 33797216  T
Q  308 caata 312  Q
    |||||    
T  33797217 caata 33797221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 3640527 - 3640448
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| |||| ||||| | | |||||||| ||||||||||| ||||||||||||| |||  || |||||||||||||    
T  3640527 aaggtgaggattgcctcctctatttaaactcttatcaagagtcttatctatccgatgtgggagatgagtttttcccaata 3640448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 188 - 271
Target Start/End: Original strand, 27048125 - 27048208
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaag 271  Q
    |||||| ||||||||| || |||||| ||||||||||||  |||||||||||| | || ||||| |||||||||| | ||||||    
T  27048125 ctgttgaaatttggggcctaactcatccttacaaaaccggcttgcaaggtgaggagtgcctcctctttataaacttttatcaag 27048208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 29669667 - 29669774
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||||||| | |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   ||||||| |||    
T  29669667 tgttgaaatttggggtttaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatctgat 29669766  T
Q  289 gtaggact 296  Q
    || |||||    
T  29669767 gtgggact 29669774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 51470598 - 51470491
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |  | |||||  |||||||||||  |||||||||  |||||||||||    
T  51470598 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagagcctcctccttataaactcttctcaagagtcctatctatccgat 51470499  T
Q  289 gtaggact 296  Q
    || |||||    
T  51470498 gtgggact 51470491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 400373 - 400451
Alignment:
Q  190 gttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatc 268  Q
    |||| ||||||||| || |||||| |||||||||| |  |||||||||||  |||||||| | ||||||||||||||||    
T  400373 gttgaaatttggggcctaactcatccttacaaaactgtcttgcaaggtgaatattgtctcatctttataaactctcatc 400451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 290
Target Start/End: Original strand, 5212009 - 5212091
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 290  Q
    |||||||||||||||||||  ||| |||||||| |||||||  | |||||||||||| || |||||||| | ||||| |||||    
T  5212009 actcattcttacaaaaccggattgtaaggtgaggattgtctattctttataaactcttattaagagtcttacctatctgatgt 5212091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 312
Target Start/End: Complemental strand, 14945245 - 14945135
Alignment:
Q  202 ggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggt 301  Q
    ||||| |||||| |||||||||||| ||   |||||||| ||||  |||| | ||||||||||    |||||||| ||||||||||||| |||| || ||    
T  14945245 ggtctaactcatccttacaaaaccggttcataaggtgaggattgcatcctctatataaactctttcgaagagtcttatctatccgatgtgggacatgtgt 14945146  T
Q  302 ttttcccaata 312  Q
    |||||||||||    
T  14945145 ttttcccaata 14945135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 310
Target Start/End: Original strand, 20441500 - 20441566
Alignment:
Q  244 tgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaa 310  Q
    |||||| | ||||||||||||||| |||| |||||||||||  |||| |||||||||||||| ||||    
T  20441500 tgtctcttctttataaactctcattaagaatctcatctatctaatgtgggacttgggttttttccaa 20441566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 296
Target Start/End: Complemental strand, 43972469 - 43972363
Alignment:
Q  190 gttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatg 289  Q
    |||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||| |||| |  |||||||||  ||||||||||||    
T  43972469 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttatcaacttttctcaagagtcctatctatccgatg 43972370  T
Q  290 taggact 296  Q
    | |||||    
T  43972369 tgggact 43972363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 218 - 303
Target Start/End: Original strand, 7806413 - 7806497
Alignment:
Q  218 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttt 303  Q
    |||||||||  ||| |||||||| | |||||||| ||||||| || ||||||||||||| |||||||||||||  ||| |||||||    
T  7806413 acaaaaccggcttgtaaggtgaggagtgtctcctctttataagctatcatcaagagtct-atctatccgatgtgagacctgggttt 7806497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 237 - 290
Target Start/End: Complemental strand, 9758371 - 9758318
Alignment:
Q  237 tgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 290  Q
    ||||| ||||||||| | |||||||||| ||||||||||| |||||||||||||    
T  9758371 tgagagttgtctcctctatataaactcttatcaagagtcttatctatccgatgt 9758318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 45427241 - 45427326
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagt 274  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||    
T  45427241 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagt 45427326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 52810660 - 52810721
Alignment:
Q  235 ggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 296  Q
    |||||| | |||||||| ||||||||||||  |||||| ||| |||||||||||||||||||    
T  52810660 ggtgaggagtgtctcctctttataaactcttctcaagaatcttatctatccgatgtaggact 52810721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 195 - 296
Target Start/End: Complemental strand, 56509718 - 56509617
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    ||||||||| || |||||| | ||||||||||  ||| ||| |||| | || ||||| ||||||||||||  ||||| |||  |||||||||||||||||    
T  56509718 aatttggggcctaactcatccgtacaaaaccggcttgtaagttgaggagtgcctcctctttataaactcttctcaagggtcctatctatccgatgtagga 56509619  T
Q  295 ct 296  Q
    ||    
T  56509618 ct 56509617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 34205982 - 34206090
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataa-actctcatcaagagtctcatctatccga 287  Q
    ||||| ||||||||  || |||||| |||||||||||   ||| |||||||| | || ||||| ||||||| ||||| ||||||||||| ||||| ||||    
T  34205982 tgttgaaatttgggacctaactcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctttataagactcttatcaagagtcttatctaaccga 34206081  T
Q  288 tgtaggact 296  Q
    ||| |||||    
T  34206082 tgtgggact 34206090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 312
Target Start/End: Complemental strand, 39110813 - 39110709
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 307  Q
    ||||| |||||||||| ||  ||| |||||||| |||| ||||| |||| | |||||  |||||| ||| |||||||||||||  |||||| |||||| |    
T  39110813 actcaatcttacaaaatcggcttgtaaggtgaggattgcctcctctttacatactcttctcaagattcttatctatccgatgtgagacttgagttttttc 39110714  T
Q  308 caata 312  Q
    |||||    
T  39110713 caata 39110709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 40197269 - 40197229
Alignment:
Q  243 ttgtctcctttttataaactctcatcaagagtctcatctat 283  Q
    ||||||||| |||||||||||| ||||||||||||||||||    
T  40197269 ttgtctcctctttataaactcttatcaagagtctcatctat 40197229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 13254498 - 13254391
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||| | ||||||||||||  |||| ||||  |||||||| ||    
T  13254498 tgttgaaatttggggcctaactcatgcttacaaaaccgggttgtaaggtgaggagtgcctcatctttataaactcttctcaatagtcctatctatccaat 13254399  T
Q  289 gtaggact 296  Q
    || |||||    
T  13254398 gtgggact 13254391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 14115524 - 14115579
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| || |||||||||| | |||||||||| ||||||||||| |||||||||||    
T  14115524 aaggtaaggattgtctcctctatataaactcttatcaagagtcttatctatccgat 14115579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 296
Target Start/End: Original strand, 21497680 - 21497779
Alignment:
Q  197 tttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 296  Q
    ||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||| ||||||  ||  ||||| ||||||| |||||    
T  21497680 tttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctgatcaagcttccaatctaaccgatgtgggact 21497779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 296
Target Start/End: Complemental strand, 21498294 - 21498195
Alignment:
Q  197 tttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 296  Q
    ||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||| ||||||  ||  ||||| ||||||| |||||    
T  21498294 tttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctgatcaagcttccaatctaaccgatgtgggact 21498195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 21647614 - 21647693
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||||| || || ||||| ||||||| |||| ||||||||||  ||||||||||||| |||||||  |||||| |||||    
T  21647614 aaggtgataagtggctcctctttataacctcttatcaagagtcatatctatccgatgtgggacttgaatttttctcaata 21647693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 27048397 - 27048504
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||  || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||| ||||||  ||  ||||| |||||    
T  27048397 tgttgaaatttgggacctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagcttcctatctaaccgat 27048496  T
Q  289 gtaggact 296  Q
    || |||||    
T  27048497 gtgggact 27048504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 290
Target Start/End: Original strand, 34206251 - 34206346
Alignment:
Q  196 atttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataa-actctcatcaagagtctcatctatccgatgt 290  Q
    |||||||| || |||||| ||||| ||||||  ||| |||||||| | || ||||| ||||||| ||||| ||||||||||| ||||| |||||||    
T  34206251 atttggggcctaactcatccttacgaaaccggcttgtaaggtgaggagtgcctcctctttataagactcttatcaagagtcttatctaaccgatgt 34206346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 311
Target Start/End: Complemental strand, 35565174 - 35565072
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 307  Q
    |||||| ||||||||||||  ||| |||| ||| |||| ||| |  ||||||||||  ||||||||||  |||||||| | || ||||||||||||||||    
T  35565174 actcatccttacaaaaccggcttgtaaggggaggattgcctc-tcattataaactcatatcaagagtcctatctatccaacgtgggacttgggtttttcc 35565076  T
Q  308 caat 311  Q
    ||||    
T  35565075 caat 35565072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 36558455 - 36558562
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | ||  | || ||||||||||||  |||| ||||  |||||||||||    
T  36558455 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcttactctttataaactcttctcaaaagtcatatctatccgat 36558554  T
Q  289 gtaggact 296  Q
    || |||||    
T  36558555 gtgggact 36558562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 312
Target Start/End: Original strand, 53559358 - 53559417
Alignment:
Q  253 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||| |||||  |||||||| | ||||||||||||| |||||||| ||||||||||||    
T  53559358 tttatatactcttctcaagagttttatctatccgatgtgggacttggttttttcccaata 53559417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 53720703 - 53720782
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||| || |||| ||||| || ||||||| | ||||| ||||| ||||||||||||| ||||||  |||||||||||||    
T  53720703 aaggtaaggattgcctcctcttaataaacttttatcaaaagtcttatctatccgatgtgggacttcagtttttcccaata 53720782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 53738197 - 53738304
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || | |||| |||||||||| |  ||| |||||||  | |||||||| ||||||||||||  |||||||||| |||||| | ||    
T  53738197 tgttgaaatttggggcctaagtcatccttacaaaactggcttgtaaggtgacgagtgtctcctctttataaactcttctcaagagtcttatctattctat 53738296  T
Q  289 gtaggact 296  Q
    || |||||    
T  53738297 gtgggact 53738304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 290
Target Start/End: Complemental strand, 4645940 - 4645866
Alignment:
Q  216 ttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 290  Q
    |||||||| ||  ||| |||||||| ||||| |||| |||||| |||||  |||||||||| |||||||||||||    
T  4645940 ttacaaaaacggcttgtaaggtgaggattgtatcctctttatatactcttctcaagagtcttatctatccgatgt 4645866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 263
Target Start/End: Original strand, 6778665 - 6778739
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactc 263  Q
    ||||| |||||| ||||| |||||  ||||||||||||  |||  ||||||| |||||||||| |||||||||||    
T  6778665 tgttgaaatttgaggtctaactcaaccttacaaaaccggcttgtgaggtgaggattgtctcctctttataaactc 6778739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 39910406 - 39910456
Alignment:
Q  190 gttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgag 240  Q
    ||||||||||||||||| |||||| ||||||||| ||||||  ||||||||    
T  39910406 gttgtaatttggggtctaactcatccttacaaaatcgatttataaggtgag 39910456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 5065958 - 5065845
Alignment:
Q  199 tggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttg 298  Q
    |||||||| ||||||  | |||||||||| ||  |||||||| ||||  |||| |||||| | | |  |||||||||| |||||||||||||  ||||||    
T  5065958 tggggtctaactcatcatcacaaaaccgacttataaggtgaggattgcatcctctttatatatttttttcaagagtcttatctatccgatgtgagacttg 5065859  T
Q  299 ggtttttcccaata 312  Q
     |||||| ||||||    
T  5065858 agttttttccaata 5065845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 7198034 - 7198083
Alignment:
Q  248 tcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 297  Q
    |||| |||||||||||| ||||||||||| |||||||| |||| ||||||    
T  7198034 tcctctttataaactcttatcaagagtcttatctatccaatgtgggactt 7198083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 21498502 - 21498441
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc 188  Q
    ||||||||| |||||||||||||| |||||||| | |||| ||||||| ||| ||| |||||    
T  21498502 ctctttaggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgatacc 21498441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 168 - 287
Target Start/End: Complemental strand, 9938586 - 9938466
Alignment:
Q  168 aattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctca 266  Q
    ||||||| ||| ||| ||||| ||||| ||||| | |||| ||| || |||||||||| || ||  |||||||||| |||||||  |||||||||||| |    
T  9938586 aattcgaaaagctctgataccatgttgaaattttgcgtctaacttatccttacaaaactgacttataaggtgagaagtgtctcccctttataaactctta 9938487  T
Q  267 tcaagagtctcatctatccga 287  Q
    | || | ||| ||||||||||    
T  9938486 taaaaaatcttatctatccga 9938466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 37288913 - 37288965
Alignment:
Q  244 tgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 296  Q
    |||||||||||||||||||||  |||||| ||  ||||||||||||| |||||    
T  37288913 tgtctcctttttataaactcttctcaagaatcatatctatccgatgtgggact 37288965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 6e-38; HSPs: 85)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 141 - 312
Target Start/End: Original strand, 39078711 - 39078883
Alignment:
Q  141 tgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtga 239  Q
    |||||||||| |||||||| | | || ||||||||||||||| ||||| ||||||||||||||| || |||||| ||||||||||||  ||| |||||||    
T  39078711 tgcgtgaataggtttaggcggcctttgaattcgataagttctgataccatgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtga 39078810  T
Q  240 gaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    | |||| ||||| ||||||||||||  ||||||||||  |||||||||| | |||||||||||||||||||||    
T  39078811 ggattgcctcctctttataaactcttctcaagagtcttgtctatccgatatgggacttgggtttttcccaata 39078883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 128 - 318
Target Start/End: Original strand, 9264427 - 9264618
Alignment:
Q  128 tctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccg 226  Q
    ||||| || |||||||||||||| |||||||  | |||| ||||||| ||| ||| ||||| ||||||||||||||| || |||||| ||||||||||||    
T  9264427 tctttgggcttggtgcgtgaataggtttaggtggcccttgaattcgacaagctctgataccatgttgtaatttggggcctaactcatccttacaaaaccg 9264526  T
Q  227 atttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaagaat 318  Q
      ||| || ||||| |||| ||||| |||||| |||||  |||||||||| ||||||||||||| |||||||||||||||||||||| ||||    
T  9264527 gcttgtaaagtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaataacgaat 9264618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 128 - 312
Target Start/End: Original strand, 4191049 - 4191234
Alignment:
Q  128 tctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccg 226  Q
    ||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| | ||| ||||||||| || |||||| ||||||||||||    
T  4191049 tctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatattgaaatttggggcctaactcatccttacaaaaccg 4191148  T
Q  227 atttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
      ||| ||||| || |||||||||| ||||||||||||  ||||||||||  |||||||||||| |||||||||||||||||||||    
T  4191149 gcttgtaaggtcaggattgtctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 4191234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 127 - 313
Target Start/End: Original strand, 51642561 - 51642749
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  51642561 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 51642660  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggac-ttgggtttttcccaataa 313  Q
    |  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  51642661 ggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggactttgggtttttcccaataa 51642749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 127 - 312
Target Start/End: Original strand, 9264219 - 9264405
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  9264219 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 9264318  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |  ||| |||||||| |||| ||||| |||||| |||||  ||||||||||  |||||||||||| |||||||| ||||||||||||    
T  9264319 ggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttgtctatccgatgtgggacttggatttttcccaata 9264405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 127 - 312
Target Start/End: Original strand, 37058697 - 37058883
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||| ||| || |||||| |||||||||||    
T  37058697 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaattttgggcctaactcatccttacaaaacc 37058796  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    | |||| |||||||| |||  ||||| |||||| |||||  ||||||||||  |||||| ||||| |||||||||||||||||||||    
T  37058797 ggtttgtaaggtgaggattacctcctctttatatactcttctcaagagtcttgtctatctgatgtgggacttgggtttttcccaata 37058883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 188 - 312
Target Start/End: Complemental strand, 50692642 - 50692518
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    |||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||||||||| |||||||||||  |||||||||    
T  50692642 ctgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttatcaagagtcttgtctatccga 50692543  T
Q  288 tgtaggacttgggtttttcccaata 312  Q
    ||| |||||||||||||||||||||    
T  50692542 tgtgggacttgggtttttcccaata 50692518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 189 - 310
Target Start/End: Complemental strand, 49477649 - 49477528
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    |||||||| |||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| |||||||||||    
T  49477649 tgttgtaaattggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgat 49477550  T
Q  289 gtaggacttgggtttttcccaa 310  Q
    || |||||||||||||||||||    
T  49477549 gtgggacttgggtttttcccaa 49477528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 137 - 312
Target Start/End: Original strand, 22407584 - 22407760
Alignment:
Q  137 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaag 235  Q
    |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| ||||||||||||  ||| |||    
T  22407584 ttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaag 22407683  T
Q  236 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||| | || ||||| |||||| |||||  || |||||||  |||||||||||| |||||||| ||||||||||||    
T  22407684 gtgaggagtgcctcctctttatatactcttctcgagagtcttgtctatccgatgtgggacttggatttttcccaata 22407760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 189 - 313
Target Start/End: Original strand, 40230628 - 40230752
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||||||  | |||||  ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||    
T  40230628 tgttgaaatttggggcttaactcaaccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctcatcaagagtctcatctatccgat 40230727  T
Q  289 gtaggacttgggtttttcccaataa 313  Q
    || | ||||||||||||| ||||||    
T  40230728 gtggaacttgggtttttctcaataa 40230752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 138 - 312
Target Start/End: Complemental strand, 50692486 - 50692315
Alignment:
Q  138 tggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggt 237  Q
    ||||||||||||| |||||||| | |||| ||||||| ||| | |    | ||||| ||||||||| || |||||| ||||||||||||  ||| |||||    
T  50692486 tggtgcgtgaataggtttaggcggcccttgaattcgacaagctttc---catgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 50692390  T
Q  238 gagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| |||||||||||||||||||||    
T  50692389 gaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 50692315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 9264075 - 9264198
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| |||||||||||    
T  9264075 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgat 9264174  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||||||||||||||||||    
T  9264175 gtgggacttgggtttttcccaata 9264198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 127 - 313
Target Start/End: Complemental strand, 37223753 - 37223566
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| |||||||  | |||| ||||||| ||| ||| ||||| ||||| ||||||| | || |||| | |||||||||||    
T  37223753 ctctttgggcttggtgcgtgaataggtttaggtggcccttgaattcgacaagctctgataccatgttgaaatttggagcctaactcttccttacaaaacc 37223654  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    |  ||| |||||||  |||| ||||| ||||||||||||  ||| |||||| ||||||||||||| |||||| |||||||||||||||    
T  37223653 ggcttgtaaggtgatgattgcctcctctttataaactcttctcaggagtcttatctatccgatgtgggacttaggtttttcccaataa 37223566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 40230424 - 40230546
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||  ||||||||||||  | | |||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||    
T  40230424 tgttgaaatttggggcctaactcaaccttacaaaaccggctcgtaaggtgaggattg-ctcctctttataaactctcatcaagagtctcatctatccgat 40230522  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || | |||||||||||||||||||    
T  40230523 gtggaacttgggtttttcccaata 40230546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 137 - 312
Target Start/End: Original strand, 53640108 - 53640284
Alignment:
Q  137 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaag 235  Q
    |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| | ||| ||||| |||  | |||||| |||||| |||||  ||| |||    
T  53640108 ttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatattgaaatttagggcataactcatccttacataaccggcttgtaag 53640207  T
Q  236 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||| |||| ||||| |||||| |||||  |||||||||| ||||||| ||||| |||||||||||||||||||||    
T  53640208 gtgaggattgcctcctctttatatactcttctcaagagtcttatctatctgatgtgggacttgggtttttcccaata 53640284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 312
Target Start/End: Complemental strand, 22339856 - 22339733
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||| |||| || |||||| ||||||||||||| ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  ||||||||||    
T  22339856 tgttgaaattgggggcctaactcatccttacaaaaccgacttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgat 22339757  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||||| ||||||||||||    
T  22339756 gtgggacttggatttttcccaata 22339733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 127 - 305
Target Start/End: Original strand, 39956600 - 39956779
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| |||||||  | |||| ||||||| ||| ||| ||||| ||||| ||||||| | || |||||| |||||||||||    
T  39956600 ctctttgggcttggtgcgtgaataggtttaggtggcccttgaattcgacaagctctgataccatgttgaaatttggagcctaactcatccttacaaaacc 39956699  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttttt 305  Q
    |  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||| ||||| ||||||| ||||||    
T  39956700 ggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatctgatgtgggacttgagttttt 39956779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 215 - 312
Target Start/End: Complemental strand, 54495620 - 54495523
Alignment:
Q  215 cttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||||||||||  ||| |||||||| |||||||||| ||||||||||||  |||||||||| ||||||||||||| |||||||| ||||||||||||    
T  54495620 cttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttggatttttcccaata 54495523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 189 - 313
Target Start/End: Original strand, 4029633 - 4029757
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| |||||||||||| |||| |||||||  ||||| |||| ||||||||||||  |||||||||| |||||||||||    
T  4029633 tgttgaaatttggggcctaactcatccttacaaaaccggtttgtaaggtgaagattgtatcctctttataaactcttctcaagagtcttatctatccgat 4029732  T
Q  289 gtaggacttgggtttttcccaataa 313  Q
    || |||||||  || ||||||||||    
T  4029733 gtgggacttgcattattcccaataa 4029757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 188 - 312
Target Start/End: Original strand, 54591453 - 54591577
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    |||||| |||||||||||| |||||| ||||||||||||  ||| |||||||| |||| |||   ||||||||||||  ||||||||||  |||||||||    
T  54591453 ctgttgaaatttggggtctaactcatgcttacaaaaccggcttgtaaggtgaggattgcctcacctttataaactcttctcaagagtcttgtctatccga 54591552  T
Q  288 tgtaggacttgggtttttcccaata 312  Q
    ||| |||||||| ||||||||||||    
T  54591553 tgtgggacttggatttttcccaata 54591577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 290
Target Start/End: Original strand, 10758934 - 10759098
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || ||||||||||||||||||||| | |  ||| ||||||||||| | | ||| | ||||| |||||||||||| |||||| |||||||||||    
T  10758934 ctctttgggcttggtgcgtgaataagtttagacggctcttgaattcgataagctatgatatcatgttgaaatttggggtctaactcatccttacaaaacc 10759033  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 290  Q
    || |||  |||||||||||| ||||| |||||| | |||  |||| | ||| |||||||||||||    
T  10759034 gacttgtgaggtgagaattgcctcctatttatatattcttctcaaaaatcttatctatccgatgt 10759098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 25627909 - 25628033
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcct-ttttataaactctcatcaagagtctcatctatccga 287  Q
    ||||| ||||||||| || |||||| ||||||||||| | ||| |||||||| |||| ||||| ||||||| |||||  | |||| ||| ||||||||||    
T  25627909 tgttggaatttggggcctaactcatccttacaaaaccaacttgtaaggtgaggattgcctcctcttttatatactcttctgaagaatcttatctatccga 25628008  T
Q  288 tgtaggacttgggtttttcccaata 312  Q
    ||| |||||||||||||||||||||    
T  25628009 tgtgggacttgggtttttcccaata 25628033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 188 - 312
Target Start/End: Complemental strand, 35011980 - 35011856
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    |||||| ||||||||| || |||||| |||||||||||| ||   |||||||| | || ||||| |||||||||||| ||||||||||| |||||  | |    
T  35011980 ctgttgaaatttggggcctaactcatccttacaaaaccggttcataaggtgaggagtgcctcctctttataaactcttatcaagagtcttatctactcaa 35011881  T
Q  288 tgtaggacttgggtttttcccaata 312  Q
    ||| |||||||||||||||||||||    
T  35011880 tgtgggacttgggtttttcccaata 35011856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 208 - 312
Target Start/End: Original strand, 51338449 - 51338553
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 307  Q
    |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| ||||||| ||||| ||||||||||||||||    
T  51338449 actcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatctgatgtgggacttgggtttttcc 51338548  T
Q  308 caata 312  Q
    |||||    
T  51338549 caata 51338553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 163 - 313
Target Start/End: Complemental strand, 35011799 - 35011648
Alignment:
Q  163 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 261  Q
    |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||| ||   |||||||| | |||||||| ||||||| |    
T  35011799 ccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggttcataaggtgaggagtgtctcctctttataatc 35011700  T
Q  262 tctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    ||| ||||||||||| |||||  | |||| |||||||||||||| |||||||    
T  35011699 tcttatcaagagtcttatctactcaatgtgggacttgggttttttccaataa 35011648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 51642417 - 51642540
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| |||||||| |     
T  51642417 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccaac 51642516  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || ||||||||||||||| |||||    
T  51642517 gtgggacttgggtttttcgcaata 51642540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 32034162 - 32034081
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaa 314  Q
    |||||||| |||||||||||| |||||||||| ||||||||||| |||||| |||||| |||| || |||||||||||||||    
T  32034162 aaggtgaggattgtctcctttgtataaactcttatcaagagtcttatctattcgatgtgggacatgagtttttcccaataaa 32034081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 127 - 282
Target Start/End: Complemental strand, 49477505 - 49477349
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| | | ||| | |||||||| |||||| || |||||| |||||||||||    
T  49477505 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctttgatatcatgttgtaaattggggcctaactcatccttacaaaacc 49477406  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatcta 282  Q
    |  ||| |||||||| |||| ||||| |||||||||| |  |||||||||| |||||    
T  49477405 ggcttgtaaggtgaggattgcctcctctttataaacttttctcaagagtcttatcta 49477349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 188 - 312
Target Start/End: Original strand, 50338370 - 50338494
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    |||||| |||||||||||| |||||  ||||||||||||  ||| |||||||  |||||||||| | |||||||||| ||||||||||| ||||||| ||    
T  50338370 ctgttgaaatttggggtctaactcaaccttacaaaaccggcttgtaaggtgaagattgtctcctctatataaactcttatcaagagtcttatctatctga 50338469  T
Q  288 tgtaggacttgggtttttcccaata 312  Q
    | |  |||||| ||||||| |||||    
T  50338470 tatgagacttgagtttttctcaata 50338494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 212 - 312
Target Start/End: Original strand, 53639977 - 53640077
Alignment:
Q  212 attcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaat 311  Q
    |||||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| ||||||||||| | |||||||| |||||||||||    
T  53639977 attcttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttgtcaagagtcttatctatccgatatgggacttggatttttcccaat 53640076  T
Q  312 a 312  Q
    |    
T  53640077 a 53640077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 33909619 - 33909733
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||||||||| |||||| ||||||||||||| |||||||||||| |||| |||   |||||||||||| ||||||||| | |  |||| |||    
T  33909619 tgttgaaatttggggtctaactcatccttacaaaaccgacttgcaaggtgaggattgcctc--atttataaactcttatcaagagttttagttatctgat 33909716  T
Q  289 gtaggacttgggttttt 305  Q
    || |||||||| |||||    
T  33909717 gtgggacttggattttt 33909733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 195 - 312
Target Start/End: Complemental strand, 35015594 - 35015477
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    ||||||||| |  |||||| ||||||||||||  ||  || ||||| |||| ||||| |||||||||| | ||||||||| | ||||||||||||| |||    
T  35015594 aatttggggccaaactcatacttacaaaaccggcttataaagtgaggattgcctcctctttataaacttttatcaagagttttatctatccgatgtggga 35015495  T
Q  295 cttgggtttttcccaata 312  Q
    ||||| ||||||||||||    
T  35015494 cttggctttttcccaata 35015477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 189 - 290
Target Start/End: Original strand, 50203846 - 50203947
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| |||||||||||| |||  |||||||| | || ||||| ||||||||||||  |||||||||| |||||||||||    
T  50203846 tgttgaaatttggggcctaactcatccttacaaaaccggtttataaggtgaggagtgcctcctctttataaactcttctcaagagtcttatctatccgat 50203945  T
Q  289 gt 290  Q
    ||    
T  50203946 gt 50203947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 19820517 - 19820632
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||| || || |||||| |||||||||||| |||| |||||||| |||||||||| ||||||||||||  |||||||| | || ||||||||    
T  19820517 tgttgaaatttgaggcctaactcatccttacaaaaccggtttgtaaggtgaggattgtctcctctttataaactcttctcaagagttttat-tatccgat 19820615  T
Q  289 gtaggacttgggttttt 305  Q
    || | || |||||||||    
T  19820616 gtggaacatgggttttt 19820632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 218 - 290
Target Start/End: Original strand, 32215548 - 32215620
Alignment:
Q  218 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 290  Q
    |||||||||  ||| |||||||| || ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  32215548 acaaaaccggcttgtaaggtgaggatggtctcctctttataaactctcatcaagagtctcatctatacgatgt 32215620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 10758757 - 10758880
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||| | |||| |||||| ||||||||||||  |||  ||||||| ||||||| || |||||| | |||  |||||||||| |||||||||||    
T  10758757 tgttgaaatttagagtctaactcatccttacaaaaccggcttgtgaggtgagtattgtcttctatttatataatcttctcaagagtcttatctatccgat 10758856  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || ||||||| |||||| ||||||    
T  10758857 gtgggacttgagttttttccaata 10758880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 187 - 302
Target Start/End: Complemental strand, 11414480 - 11414366
Alignment:
Q  187 cctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccg 286  Q
    ||||||| |||||| || || |||||| ||||||||||||  ||  |||||||| |||||||||| ||||||||||||  |||||||||| || ||||||    
T  11414480 cctgttgaaatttgaggcctaactcatccttacaaaaccggcttctaaggtgaggattgtctcctctttataaactcttctcaagagtcttat-tatccg 11414382  T
Q  287 atgtaggacttgggtt 302  Q
    |||| |||| ||||||    
T  11414381 atgtgggacatgggtt 11414366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 190 - 312
Target Start/End: Complemental strand, 38422097 - 38421977
Alignment:
Q  190 gttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatg 289  Q
    |||| |||||||||||| |||||  ||||||||| ||  ||| |||||||||| || ||||| |  ||||||||| || || ||||| ||||||||||||    
T  38422097 gttgaaatttggggtctaactcaaccttacaaaatcggcttgtaaggtgagaactgcctcctat--ataaactcttattaatagtcttatctatccgatg 38422000  T
Q  290 taggacttgggtttttcccaata 312  Q
    | |||||| ||||||||||||||    
T  38421999 tgggacttaggtttttcccaata 38421977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 39956456 - 39956579
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || | |||| |||||||||| |  ||| |||||||| |||||||||| ||||||||||||  | |||| |||  |||||| |||    
T  39956456 tgttgaaatttggggcctaattcatccttacaaaactggcttgtaaggtgaggattgtctcctctttataaactcttcttaagattcttgtctatctgat 39956555  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||||| ||||||||||||    
T  39956556 gtgggacttggatttttcccaata 39956579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 40926525 - 40926446
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||| ||| |||||||||| | |||||||||| ||||||||||| ||||||||||||| |||| || |||||||||||||    
T  40926525 aaggagaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgtgtttttcccaata 40926446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 43101360 - 43101467
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| |  |||||| ||||||||||||||||| |||||||| | || ||||| ||||||||||||  |||||||||  ||||||| |||    
T  43101360 tgttgaaatttggggccaaactcatccttacaaaaccgatttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatctgat 43101459  T
Q  289 gtaggact 296  Q
    || |||||    
T  43101460 gtgggact 43101467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 188 - 298
Target Start/End: Original strand, 44461055 - 44461165
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    |||||| ||||||| |||  |||||| |||||||||| ||||  ||||||||| | |||||||| |||||||||||| ||||||||| | || || ||||    
T  44461055 ctgttgaaatttggagtccaactcatccttacaaaactgattcacaaggtgaggaatgtctcctctttataaactcttatcaagagtgttatttacccga 44461154  T
Q  288 tgtaggacttg 298  Q
    ||| |||||||    
T  44461155 tgtgggacttg 44461165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 234 - 316
Target Start/End: Original strand, 53761432 - 53761514
Alignment:
Q  234 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaaga 316  Q
    ||||||| | || ||||| |||||||||||| |||||| |||| |||||||||| || |||||||||||||||||| ||||||    
T  53761432 aggtgaggagtgcctcctctttataaactcttatcaagggtcttatctatccgaagtgggacttgggtttttcccagtaaaga 53761514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 312
Target Start/End: Complemental strand, 42259019 - 42258902
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    ||||||| | || |||||| ||| ||||| ||  ||| |||||||| |||| ||||| |||||| |||||  |||||| ||| ||||||||||||| |||    
T  42259019 aatttggagcctaactcatccttgcaaaatcggcttgtaaggtgaggattgcctcctctttatatactcttctcaagaatcttatctatccgatgtggga 42258920  T
Q  295 cttgggtttttcccaata 312  Q
    ||||| ||||||||||||    
T  42258919 cttggatttttcccaata 42258902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 44145116 - 44145217
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    |||||||||||| | |||| |||| |||||| | ||  |||||||| |||||||||| |||||||||| | ||||||||||| ||||||| ||||| |||    
T  44145116 aatttggggtctaaatcatccttataaaaccaacttataaggtgagtattgtctcctctttataaactattatcaagagtcttatctatctgatgtggga 44145215  T
Q  295 ct 296  Q
    ||    
T  44145216 ct 44145217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 12800205 - 12800089
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||||||||| ||||||  ||| ||||| | ||||||||||||| ||||  ||||||| ||||| | | ||||||||||| ||||||| ||     
T  12800205 tgttgaaatttggggtctaactcatctttataaaacgggtttgcaaggtgaggattgcttccttttaataaatttttatcaagagtcttatctatctgac 12800106  T
Q  289 gtaggacttgggttttt 305  Q
    || ||||||| ||||||    
T  12800105 gtgggacttgagttttt 12800089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 208 - 312
Target Start/End: Original strand, 44145403 - 44145506
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 307  Q
    |||||| |||||| |||||  ||  |||||||| | || ||||||||||||| |||| ||||||||||  ||||||||||||| ||| ||||||||||||    
T  44145403 actcatccttacagaaccggcttataaggtgaggagtgcctcctttttataa-ctcttatcaagagtcatatctatccgatgtgggatttgggtttttcc 44145501  T
Q  308 caata 312  Q
    |||||    
T  44145502 caata 44145506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 4256349 - 4256242
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || ||||||||||| |||||||| ||| ||  |||| | |||||||| ||||||||||||  |||||||| | ||| |||||||    
T  4256349 tgttgaaatttggggcctaactcattcttaaaaaaccgacttgtaaaatgaggagtgtctcctctttataaactcttctcaagagtgttatccatccgat 4256250  T
Q  289 gtaggact 296  Q
    || |||||    
T  4256249 gtgggact 4256242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 22407430 - 22407553
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||| |||||  || ||||| |  ||||||||||    
T  22407430 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttatatactcttctcgagagttttgtctatccgat 22407529  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||| | ||||||||||||    
T  22407530 gtgggacttagatttttcccaata 22407553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 25578714 - 25578792
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||  |||||||||| | |||||||||| ||||| ||||| ||||||||||||| |||| ||||||||||||||||    
T  25578714 aaggtgaagattgtctcctctatataaactcttatcaa-agtcttatctatccgatgtgggacatgggtttttcccaata 25578792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 26366846 - 26366731
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||| |||| || |||||| ||||||||| ||   || |||||||| |||| ||| | ||||||||||||  ||||||||||  ||||||||||    
T  26366846 tgttgaaattgggggcctaactcatccttacaaaaacggcatgtaaggtgaggattgcctcatatttataaactcttctcaagagtcttgtctatccgat 26366747  T
Q  289 gtaggacttgggtttt 304  Q
    || |||||||||||||    
T  26366746 gtgggacttgggtttt 26366731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 29763685 - 29763799
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||| |||||| | |||| |||||||||||| ||   ||| || | | |||||||| |||||||||||| ||||||||||| |||||||||||    
T  29763685 tgttgaaatttagggtctaattcatccttacaaaaccggttcataagatggggagtgtctcctctttataaactcttatcaagagtcttatctatccgat 29763784  T
Q  289 gtaggacttgggtttt 304  Q
    || ||| |||||||||    
T  29763785 gtggga-ttgggtttt 29763799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 234 - 305
Target Start/End: Complemental strand, 34992939 - 34992868
Alignment:
Q  234 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttttt 305  Q
    ||||||| |||| ||||| ||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||    
T  34992939 aggtgaggattgcctcctctttataaactcttctcaagagtcttatctatctgatgtgggacttgggttttt 34992868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 35358486 - 35358565
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| ||||||||||||||||| ||| |  |||||||||| ||||||| |||||  ||||||| ||||||||||||    
T  35358486 aaggtgaggattgtctcctttttatatacttttttcaagagtcttatctatctgatgtgagacttggatttttcccaata 35358565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 40927097 - 40927026
Alignment:
Q  237 tgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttccc 308  Q
    |||| |||||||||| | |||||||||| ||||||||||| ||||||||||||| |||| ||| ||||||||    
T  40927097 tgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatggatttttccc 40927026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 47702461 - 47702536
Alignment:
Q  237 tgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||| |||| ||||| || ||| |||||  |||||||||||||||||||||||| ||||||| |||||||||||||    
T  47702461 tgaggattgcctcctcttcatatactcttctcaagagtctcatctatccgatgtgggacttgtgtttttcccaata 47702536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 26926978 - 26926904
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 307  Q
    |||||||| |||||||||| | |||||||||| ||||||||||| ||||||| ||||| |||| ||| |||||||    
T  26926978 aaggtgaggattgtctcctctatataaactcttatcaagagtcttatctatctgatgtgggacatggttttttcc 26926904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 266 - 312
Target Start/End: Complemental strand, 29369839 - 29369793
Alignment:
Q  266 atcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  29369839 atcaagagtcttatctatccgatgtgggacttgggtttttcccaata 29369793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 286
Target Start/End: Original strand, 16078852 - 16078949
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccg 286  Q
    ||||| |||| |||| || |||||  |||| |||||||| |||||||||||  |||| ||||||| |||||||| | ||||||||||| |||||||||    
T  16078852 tgttgaaattgggggcctaactcaaccttaaaaaaccgacttgcaaggtgatgattgcctcctttatataaacttttatcaagagtcttatctatccg 16078949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 312
Target Start/End: Original strand, 21832686 - 21832803
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    ||||||||| || |||||| |||||||||||    |  |||||||| ||||||||||  |||||||||||  ||||||||||  |||||||||||| |||    
T  21832686 aatttggggcctaactcatccttacaaaaccagcatataaggtgaggattgtctcctccttataaactcttctcaagagtcttgtctatccgatgtggga 21832785  T
Q  295 cttgggtttttcccaata 312  Q
    |||| | |||| ||||||    
T  21832786 cttgagatttttccaata 21832803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 39269567 - 39269498
Alignment:
Q  237 tgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttc 306  Q
    |||| |||||||||| | |||||||||| ||||||||||| ||||||||||||| |||| ||| ||||||    
T  39269567 tgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatggatttttc 39269498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 42637791 - 42637860
Alignment:
Q  244 tgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    |||||||||| |||||||||| ||||||||||| |||||||| |||| |||  || ||||||||||||||    
T  42637791 tgtctcctttatataaactcttatcaagagtcttatctatccaatgtgggatatgagtttttcccaataa 42637860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 312
Target Start/End: Complemental strand, 5440633 - 5440569
Alignment:
Q  248 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||| ||||||||||||  ||||||||||  |||||||||||| | |||||||||||||||||||    
T  5440633 tcctctttataaactcttctcaagagtcttgtctatccgatgtggaacttgggtttttcccaata 5440569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 305
Target Start/End: Complemental strand, 34992644 - 34992576
Alignment:
Q  237 tgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttttt 305  Q
    |||| |||| ||||| ||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||    
T  34992644 tgaggattgcctcctctttataaactcttctcaagagtcttatctatctgatgtgggacttgggttttt 34992576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 21832188 - 21832311
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  |||  ||||||| |||| ||| | |||||||||| |  ||||||||||  ||||||||||    
T  21832188 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtgaggtgaggattgcctcatctttataaacttttctcaagagtcttgtctatccgat 21832287  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    ||  ||||| |||| ||| |||||    
T  21832288 gtgagacttaggttgttctcaata 21832311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 40926774 - 40926695
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||| ||| |||||||||| | |||||||||| ||||||||||| ||||||||||||| |||| | | ||||| ||||||    
T  40926774 aaggagaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacattgattttttccaata 40926695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 54369154 - 54369047
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||| ||||| || |||||| ||||| |||||| |||| || ||||| | || ||||| ||||||||||||  |||||||||  |||||||||||    
T  54369154 tgttggaatatggggcctaactcatccttacgaaaccggtttgtaaagtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgat 54369055  T
Q  289 gtaggact 296  Q
    || |||||    
T  54369054 gtgggact 54369047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 26915178 - 26915108
Alignment:
Q  242 attgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||||| | |||||||||| ||||||||||| ||||||| ||| | ||||||| |||||| ||||||    
T  26915178 attgtctcctctatataaactcttatcaagagtcttatctatctgatctgggacttgagttttttccaata 26915108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 42604959 - 42604905
Alignment:
Q  253 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 307  Q
    ||||||||||  ||||||||||||||||||||||||||  ||||||| |||||||    
T  42604959 tttataaacttccatcaagagtctcatctatccgatgtgagacttggatttttcc 42604905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 274
Target Start/End: Complemental strand, 44574052 - 44573966
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagt 274  Q
    |||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||    
T  44574052 ctgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagt 44573966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 312
Target Start/End: Complemental strand, 21833640 - 21833516
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    |||||| ||||||||| || |||||| ||||| ||||||  ||| | | | || |||| ||||| ||||||||||||  || |||||||  | ||||| |    
T  21833640 ctgttgaaatttggggcctaactcatccttacgaaaccggcttgtaggctaaggattgcctcctctttataaactcttctccagagtcttgtttatccaa 21833541  T
Q  288 tgtaggacttgggtttttcccaata 312  Q
    ||| ||||||||||||||| |||||    
T  21833540 tgtgggacttgggtttttctcaata 21833516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 296
Target Start/End: Complemental strand, 24539261 - 24539161
Alignment:
Q  197 tttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaa-ctctcatcaagagtctcatctatccgatgtaggac 295  Q
    ||||||| || |||||| ||||||||| ||  ||| |||||||| | |||||||| |||| ||| |||| ||||||||||| ||||| | ||||||||||    
T  24539261 tttggggcctaactcatccttacaaaatcggcttgtaaggtgaggagtgtctcctctttacaaaactcttatcaagagtcttatctaactgatgtaggac 24539162  T
Q  296 t 296  Q
    |    
T  24539161 t 24539161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 313
Target Start/End: Original strand, 39018827 - 39018903
Alignment:
Q  237 tgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    |||| |||||||||| | |||||||||  ||||||||||| ||||||||||||| ||||    ||||||||||||||    
T  39018827 tgaggattgtctcctctatataaactcctatcaagagtcttatctatccgatgtgggacaaaagtttttcccaataa 39018903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 51836290 - 51836411
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||||||||| | ||||||||| |||||| | |||  ||||||| | |||||||| ||||||||  ||||| || | ||||| |||||| ||    
T  51836290 tgttgaaatttggggtctaattcattcttataaaaccaacttgtgaggtgaggagtgtctcctatttataaa--ctcataaaaaatctcaactatccaat 51836387  T
Q  289 gtaggacttgggtttttcccaata 312  Q
     | ||| || ||||||||||||||    
T  51836388 atgggatttaggtttttcccaata 51836411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 296
Target Start/End: Complemental strand, 3985880 - 3985781
Alignment:
Q  197 tttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 296  Q
    ||||||| || |||||| ||||||||||||  ||| |||||||| | ||  |||| ||||||||||||  |||| ||||  ||||||||||||| |||||    
T  3985880 tttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaactcttctcaaaagtcatatctatccgatgtgggact 3985781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 21750590 - 21750483
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| |||||||||| |  ||| |||||||| | || ||||| |||||||||||| ||||||  ||  ||||| |||||    
T  21750590 tgttgaaatttggggcctaactcatccttacaaaactggcttgtaaggtgaggagtgcctcctctttataaactctgatcaagcttcctatctaaccgat 21750491  T
Q  289 gtaggact 296  Q
    || |||||    
T  21750490 gtgggact 21750483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 34715444 - 34715551
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||||||  | |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||| |||   |||||||||||    
T  34715444 tgttgaaatttggggcataactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaaaagtgctatctatccgat 34715543  T
Q  289 gtaggact 296  Q
    || |||||    
T  34715544 gtgggact 34715551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 310
Target Start/End: Complemental strand, 42311270 - 42311207
Alignment:
Q  247 ctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaa 310  Q
    ||||| |||||||||| | |||| || ||  ||||||||||||| |||||||||||||||||||    
T  42311270 ctcctctttataaacttttatcaggattcctatctatccgatgtgggacttgggtttttcccaa 42311207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 264
Target Start/End: Complemental strand, 44573754 - 44573679
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactct 264  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||    
T  44573754 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct 44573679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 290
Target Start/End: Complemental strand, 46139341 - 46139246
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 290  Q
    |||||||||||| |||||||||||||||||    ||| || |||||| ||||| ||| |||||||||| |  |||||||| | |||||||| ||||    
T  46139341 aatttggggtctaactcattcttacaaaactagcttgtaaagtgagatttgtcccctctttataaacttttctcaagagtgttatctatccaatgt 46139246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 13769286 - 13769387
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    ||||||||| || |||||| |||||||||||   ||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||| |||| |||    
T  13769286 aatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccaatgtggga 13769385  T
Q  295 ct 296  Q
    ||    
T  13769386 ct 13769387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 27219418 - 27219337
Alignment:
Q  215 cttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 296  Q
    ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   ||||||||||||| |||||    
T  27219418 cttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgatgtgggact 27219337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 290
Target Start/End: Original strand, 37040016 - 37040073
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 290  Q
    ||||||||||||||||||| | ||| |||||| ||||||||||| |||| | ||||||    
T  37040016 aaggtgagaattgtctcctctatattaactcttatcaagagtcttatcttttcgatgt 37040073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 208 - 296
Target Start/End: Original strand, 14170007 - 14170095
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 296  Q
    |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||| |||  |||||||| | || |||||||||| |||||    
T  14170007 actcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaaatcttctcaagagtgttatttatccgatgtgggact 14170095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 208 - 296
Target Start/End: Complemental strand, 44573422 - 44573334
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 296  Q
    |||||| ||||||||||||  ||| | |||||| | || ||||| ||||||||||||  ||||||||   ||||||||||||| |||||    
T  44573422 actcatccttacaaaaccggcttgtagggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgatgtgggact 44573334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 3e-37; HSPs: 72)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 127 - 313
Target Start/End: Original strand, 3435412 - 3435599
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||||||||||||| || |||||| |||||||||||    
T  3435412 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgtaatttggggcctaactcatccttacaaaacc 3435511  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    | |||| |||||||| |||| ||||| | ||||||||||  |||||||||| ||||||||||||| |||||||  ||||| |||||||    
T  3435512 ggtttgtaaggtgaggattgcctcctctgtataaactcttctcaagagtcttatctatccgatgtgggacttgaattttttccaataa 3435599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 127 - 313
Target Start/End: Complemental strand, 12432076 - 12431889
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || ||||||| |||||| |||||||| | |||| |||| || ||| | | ||||| ||||| ||||||||| ||  ||||| |||||||||||    
T  12432076 ctctttgggcttggtgcatgaataggtttaggcggcccttgaatttgacaagctttgataccatgttgaaatttggggcctagctcatccttacaaaacc 12431977  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    |  ||| |||||||| |||||||||| ||||||||||||  |||||||||| ||||||||||||| ||||||||||||||||||||||    
T  12431976 ggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaataa 12431889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 127 - 312
Target Start/End: Original strand, 33985901 - 33986087
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||| ||||| |  |||| | |||||||||||    
T  33985901 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatctggggcccaactcttccttacaaaacc 33986000  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| ||||||||||||| ||| |||||||||||||||||    
T  33986001 ggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggagttgggtttttcccaata 33986087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 137 - 312
Target Start/End: Complemental strand, 29684179 - 29684003
Alignment:
Q  137 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaag 235  Q
    ||||||||||||||||||||||  |||||| ||||||| ||| ||| ||||| | ||| |||||||| ||| ||| || ||||||||||||  ||| |||    
T  29684179 ttggtgcgtgaataagtttaggtggtccttgaattcgacaagctctgataccatattgaaatttgggttctaacttatccttacaaaaccggcttgtaag 29684080  T
Q  236 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||| |||| ||||| |||||| |||||  ||||||||||  |||||| ||||  |||||||||||||||||||||    
T  29684079 gtgaggattgcctcctctttatatactcttctcaagagtcttgtctatctgatgcgggacttgggtttttcccaata 29684003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 195 - 312
Target Start/End: Complemental strand, 17727513 - 17727396
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| || || ||||||||||||  |||||||||| ||||||||||||| |||    
T  17727513 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgccttctctttataaactcttctcaagagtcttatctatccgatgtggga 17727414  T
Q  295 cttgggtttttcccaata 312  Q
    ||||||||||||||||||    
T  17727413 cttgggtttttcccaata 17727396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 188 - 313
Target Start/End: Original strand, 20998977 - 20999102
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    |||||| |||| |||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||    
T  20998977 ctgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccga 20999076  T
Q  288 tgtaggacttgggtttttcccaataa 313  Q
    ||| ||||||||||||||||||||||    
T  20999077 tgtgggacttgggtttttcccaataa 20999102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 208 - 312
Target Start/End: Original strand, 883609 - 883713
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 307  Q
    |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||||| ||||||||||||||||    
T  883609 actcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcc 883708  T
Q  308 caata 312  Q
    |||||    
T  883709 caata 883713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 125 - 305
Target Start/End: Complemental strand, 29101931 - 29101749
Alignment:
Q  125 cgctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaa 223  Q
    |||||||||||||||||||||||||| |||||||| | | || |||| |||||| ||| ||||| ||||| |||||| || || |||||| |||| ||||    
T  29101931 cgctctttaggtttggtgcgtgaataggtttaggcggcctttgaatttgataaggtctgataccatgttgaaatttgaggcctaactcatccttataaaa 29101832  T
Q  224 ccgatttgcaaggtgagaattgtctcct-ttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttttt 305  Q
    |||  |||  |||| || |||||||||| |||||||||||||  ||||| ||||  |||||||||||| ||||||| ||||||    
T  29101831 ccggcttgtgaggtaaggattgtctcctcttttataaactcttctcaagtgtcttgtctatccgatgtgggacttgagttttt 29101749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 215 - 312
Target Start/End: Complemental strand, 884146 - 884049
Alignment:
Q  215 cttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||||||||||||||||| |||||||||||||||||||||    
T  884146 cttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtctcatctatccgatgtgggacttgggtttttcccaata 884049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 187 - 312
Target Start/End: Complemental strand, 32667300 - 32667175
Alignment:
Q  187 cctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccg 286  Q
    ||||||| ||||||||| || |||||| ||||||||||||  ||| ||||| || |||| ||||| | |||||||||| ||||||||||| ||||||| |    
T  32667300 cctgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtaaggattgcctcctctatataaactcttatcaagagtcttatctatctg 32667201  T
Q  287 atgtaggacttgggtttttcccaata 312  Q
    |||| |||||| ||||||||||||||    
T  32667200 atgtgggacttcggtttttcccaata 32667175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 188 - 312
Target Start/End: Complemental strand, 16007093 - 16006969
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    |||||| | |||||||||| |||||| ||||||||||||  ||| |||||||| |||  ||||| |||||| |||||  ||||||||||  |||||||||    
T  16007093 ctgttgaactttggggtctaactcatccttacaaaaccggcttgtaaggtgaggattacctcctctttatatactcttctcaagagtcttgtctatccga 16006994  T
Q  288 tgtaggacttgggtttttcccaata 312  Q
    ||| |||||||||||||||||||||    
T  16006993 tgtgggacttgggtttttcccaata 16006969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 201 - 312
Target Start/End: Original strand, 27545117 - 27545228
Alignment:
Q  201 gggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttggg 300  Q
    |||||| |||||| |||||||||||| |||| |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||||| |||| |||     
T  27545117 gggtctaactcatccttacaaaaccggtttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacatgga 27545216  T
Q  301 tttttcccaata 312  Q
    ||||| ||||||    
T  27545217 ttttttccaata 27545228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 189 - 312
Target Start/End: Complemental strand, 34775472 - 34775349
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||| |||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||||| |||  ||||||||||  ||||||||||    
T  34775472 tgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaattcttctcaagagtcttgtctatccgat 34775373  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||||||||||||||||||    
T  34775372 gtgggacttgggtttttcccaata 34775349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 127 - 307
Target Start/End: Complemental strand, 884028 - 883847
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| | | ||||| ||||  |||| |||| || |||||| |||||||||||    
T  884028 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctttgataccatgttaaaattgggggcctaactcatccttacaaaacc 883929  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 307  Q
    |  ||| |||||||| |||| |||   ||||||||||||  ||||||||||  |||||||||| | ||||||||||||||||    
T  883928 ggcttgtaaggtgaggattgcctctcctttataaactcttctcaagagtcttgtctatccgatatgggacttgggtttttcc 883847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 188 - 312
Target Start/End: Original strand, 33985759 - 33985881
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    |||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||  ||||  |||||||||| ||||||||||    
T  33985759 ctgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttata--ctcttctcaagagtcttatctatccga 33985856  T
Q  288 tgtaggacttgggtttttcccaata 312  Q
    ||| |||||||||||||| ||||||    
T  33985857 tgtgggacttgggtttttgccaata 33985881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 312
Target Start/End: Complemental strand, 12432220 - 12432097
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||  || |||||| |||| |||||| ||||| |||||||| |||| ||||| ||||||||||||  |||||| ||| |||||||||||    
T  12432220 tgttgaaatttgggacctaactcatccttaaaaaaccaatttgtaaggtgaggattgcctcctctttataaactcttctcaagattcttatctatccgat 12432121  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||||| ||||| ||||||    
T  12432120 gtgggacttggattttttccaata 12432097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 25621274 - 25621397
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||| |||| || |||||| ||||||||||||  ||| ||||||||  |||| |||| |||||| |||||  |||||||||| |||||||||||    
T  25621274 tgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgagggttgtttcctctttatatactcttctcaagagtcttatctatccgat 25621373  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    ||  ||||||||||||||||||||    
T  25621374 gtgagacttgggtttttcccaata 25621397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 312
Target Start/End: Complemental strand, 31761247 - 31761124
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||| | ||| |||||||| |||| ||| | | ||||||||||  |||| ||||| |||||||||||    
T  31761247 tgttgaaatttggggcctaactcatccttacaaaaccaacttgtaaggtgaggattgcctcttctatataaactcttctcaaaagtcttatctatccgat 31761148  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||| ||||||||||||||    
T  31761147 gtgggacttaggtttttcccaata 31761124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 210 - 312
Target Start/End: Complemental strand, 19860131 - 19860029
Alignment:
Q  210 tcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttccca 309  Q
    |||| ||||||||||||  ||| |||||| | |||| ||||| ||||||||||||  ||||||||||  |||||||||||| ||||||||||||||||||    
T  19860131 tcatccttacaaaaccggcttgtaaggtgtggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttccca 19860032  T
Q  310 ata 312  Q
    |||    
T  19860031 ata 19860029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 290
Target Start/End: Original strand, 6183355 - 6183456
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||| |||||||||| |||||||| ||||||||||||  ||||||||   |||||||||||    
T  6183355 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaggtgagaagtgtctcctctttataaactcttctcaagagtactatctatccgat 6183454  T
Q  289 gt 290  Q
    ||    
T  6183455 gt 6183456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 39386766 - 39386661
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 307  Q
    |||||| |||||||||||  ||   |||||||| |||| ||||| | |||||||||| ||||||||||| ||||||||||||| |||| |||||||||||    
T  39386766 actcatccttacaaaaccagttcataaggtgaggattgcctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggtttttcc 39386667  T
Q  308 caataa 313  Q
    ||||||    
T  39386666 caataa 39386661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 196 - 312
Target Start/End: Complemental strand, 32667085 - 32666969
Alignment:
Q  196 atttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggac 295  Q
    |||||||| || ||||||  |||||||||||  ||| ||||| ||||||| ||||| | |||||||||| ||||||||||| || ||||| |||  ||||    
T  32667085 atttggggcctaactcatcattacaaaaccggcttgtaaggtaagaattgcctcctctatataaactcttatcaagagtcttatttatccaatgagggac 32666986  T
Q  296 ttgggtttttcccaata 312  Q
    |||||||||||||||||    
T  32666985 ttgggtttttcccaata 32666969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 6986449 - 6986528
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||||| |||||||| ||||||||||||    
T  6986449 aaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttggatttttcccaata 6986528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 12419896 - 12419829
Alignment:
Q  246 tctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    |||||| ||||||||||||  |||||||||| ||||||||||||| ||||||||||||||||||||||    
T  12419896 tctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaataa 12419829  T

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Target: chr2; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 189 - 312
Target Start/End: Complemental strand, 40010089 - 40009966
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || || ||| ||||||||||||  ||| |||||||| |||| ||||| ||| ||  ||||  |||||||| | |||||||||||    
T  40010089 tgttgaaatttggggcctaacacatccttacaaaaccggcttgtaaggtgaggattgcctcctctttctatgctcttctcaagagttttatctatccgat 40009990  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||||||||||||||||||    
T  40009989 gtgggacttgggtttttcccaata 40009966  T

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Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 234 - 312
Target Start/End: Original strand, 29695373 - 29695451
Alignment:
Q  234 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||||| ||||||| || ||||||||||||  |||||||||| |||||||||||||  ||||||||||||||||||||    
T  29695373 aggtgaggattgtctactctttataaactcttctcaagagtcttatctatccgatgtgagacttgggtttttcccaata 29695451  T

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Target: chr2; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 7257616 - 7257721
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 307  Q
    |||||| ||||||||||||| ||| |||||||| ||||  |||| |||||||||| |  |||||||||| ||||||||||| | |||||| | |||||||    
T  7257616 actcatccttacaaaaccgacttgtaaggtgaggattgcatcctctttataaactattctcaagagtcttatctatccgatatgggacttagatttttcc 7257715  T
Q  308 caataa 313  Q
    ||||||    
T  7257716 caataa 7257721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 8044534 - 8044658
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcct-ttttataaactctcatcaagagtctcatctatccga 287  Q
    ||||| ||||||||  || |||||| |||||||||| | ||   |||||||| | || ||||| ||||||||||||| ||||||||||| ||||||| ||    
T  8044534 tgttgaaatttgggacctaactcatccttacaaaactggttcataaggtgaggagtgcctcctcttttataaactcttatcaagagtcttatctatctga 8044633  T
Q  288 tgtaggacttgggtttttcccaata 312  Q
    ||  |||||||||||||||||||||    
T  8044634 tgcgggacttgggtttttcccaata 8044658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 3976460 - 3976567
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||||||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||| | | |||||||||||    
T  3976460 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaatattatctatccgat 3976559  T
Q  289 gtaggact 296  Q
    || |||||    
T  3976560 gtgggact 3976567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 19859987 - 19859916
Alignment:
Q  242 attgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    |||| ||||| ||||||||||||  ||||||||||  |||||||||||| ||||||||||||||||||||||    
T  19859987 attgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaataa 19859916  T

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Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 312
Target Start/End: Complemental strand, 29676383 - 29676286
Alignment:
Q  215 cttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||||||| ||   |||||||| |||| ||||| | |||||||||| ||||||||||| |||||||||||||  ||| || |||||||||||||    
T  29676383 cttacaaaaccggttcttaaggtgaggattgactcctatatataaactcttatcaagagtcttatctatccgatgtgagacatgtgtttttcccaata 29676286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 188 - 296
Target Start/End: Original strand, 18901852 - 18901960
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    |||||| ||||||||| ||  |||||||||||||||| |  ||| |||||||  | || ||||| ||||||||||||  |||||||||| ||||||||||    
T  18901852 ctgttgaaatttggggcctatctcattcttacaaaacaggcttgtaaggtgaagagtgcctcctctttataaactcttttcaagagtcttatctatccga 18901951  T
Q  288 tgtaggact 296  Q
    ||| |||||    
T  18901952 tgtgggact 18901960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 218 - 312
Target Start/End: Complemental strand, 10571021 - 10570927
Alignment:
Q  218 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||||  ||| |||||||  |||| ||||  |||||| |||||  |||||||||| ||||||| ||||| |||||||||||||||||||||    
T  10571021 acaaaaccggcttgtaaggtgaagattgcctccactttatatactcttctcaagagtcttatctatctgatgtgggacttgggtttttcccaata 10570927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 26847276 - 26847349
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 307  Q
    |||||||||| |||||| | |||||||||||| ||||||||||  |||||||| |||| ||||||||||||||||    
T  26847276 aaggtgagaagtgtctc-tctttataaactcttatcaagagtcctatctatccaatgtgggacttgggtttttcc 26847349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 4721846 - 4721911
Alignment:
Q  242 attgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 307  Q
    |||| ||||| | |||||||||| ||||||||||| ||||||||||||| |||| |||||||||||    
T  4721846 attgcctcctctatataaactcttatcaagagtctaatctatccgatgtgggacatgggtttttcc 4721911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 271
Target Start/End: Complemental strand, 10429848 - 10429772
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaag 271  Q
    |||||||||||| |||||| ||||||||||||  ||| ||| |||| | |||||||| |||||||||||| ||||||    
T  10429848 aatttggggtctaactcatccttacaaaaccggcttgtaagatgaggagtgtctcctctttataaactcttatcaag 10429772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 276
Target Start/End: Original strand, 10536925 - 10537005
Alignment:
Q  196 atttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtct 276  Q
    |||||||| || |||||| ||| |||||||| ||   |||||||||| || |||||| |||||||||||||||||||||||    
T  10536925 atttggggcctaactcatccttgcaaaaccggttcataaggtgagaagtgcctccttcttataaactctcatcaagagtct 10537005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 312
Target Start/End: Original strand, 10542071 - 10542175
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 307  Q
    |||||| |||||||||||   ||| ||| |||| | |||||||| |||||||||||| |||||||||   |||||||  |||| ||||||| ||||||||    
T  10542071 actcatccttacaaaaccagcttgtaagatgaggagtgtctcctctttataaactcttatcaagagttcaatctatctaatgtgggacttgagtttttcc 10542170  T
Q  308 caata 312  Q
    |||||    
T  10542171 caata 10542175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 312
Target Start/End: Complemental strand, 22447361 - 22447297
Alignment:
Q  248 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||| |||| ||||||| ||||| ||||| |||||| | ||||||||||||||||||||||||||    
T  22447361 tcctctttaaaaactcttatcaaaagtcttatctattcaatgtaggacttgggtttttcccaata 22447297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 283
Target Start/End: Original strand, 33277548 - 33277636
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctat 283  Q
    |||||||||||| ||||||  ||||||||| || ||| ||||||||||||| ||| |||||||||||| | ||||| | ||| ||||||    
T  33277548 aatttggggtctaactcatctttacaaaactgacttgtaaggtgagaattgactcatttttataaacttttatcaataatcttatctat 33277636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 42768323 - 42768428
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||||  | |||||||||||    
T  42768323 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagag--ttatctatccgat 42768420  T
Q  289 gtaggact 296  Q
    || |||||    
T  42768421 gtgggact 42768428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 3976992 - 3977099
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||||||||||||| || |||||| ||||||||||||  ||| ||  |||| | || ||||| ||||||||||||  ||||||||   |||||||||||    
T  3976992 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaatttgaggagtgcctcctctttataaactcttctcaagagtactatctatccgat 3977091  T
Q  289 gtaggact 296  Q
    || |||||    
T  3977092 gtgggact 3977099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 15820100 - 15820151
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtga 239  Q
    |||||| |||||||||||| |||||||||||||||||||| ||| |||||||    
T  15820100 ctgttgaaatttggggtctaactcattcttacaaaaccgacttgtaaggtga 15820151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 23054441 - 23054334
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   ||||||| |||    
T  23054441 tgttgaaatttggggcctaactcatccttacaaaaccgtcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagttatatctatctgat 23054342  T
Q  289 gtaggact 296  Q
    || |||||    
T  23054341 gtgggact 23054334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 43195899 - 43195792
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   ||||||| |||    
T  43195899 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatctgat 43195800  T
Q  289 gtaggact 296  Q
    || |||||    
T  43195799 gtgggact 43195792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 296
Target Start/End: Complemental strand, 7877938 - 7877852
Alignment:
Q  210 tcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 296  Q
    |||| ||||||||||||  ||| |||||||| | |||||||| ||||||||||||  || |||||   |||||||||||||||||||    
T  7877938 tcatccttacaaaaccggcttgtaaggtgaggagtgtctcctctttataaactcttctcgagagtgctatctatccgatgtaggact 7877852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 10849486 - 10849564
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagag 273  Q
    ||||||||| || |||||| ||||||||||| | ||| |||||||| | || ||||| |||||||||||| ||||||||    
T  10849486 aatttggggcctaactcatccttacaaaaccaacttgtaaggtgaggagtgcctcctctttataaactcttatcaagag 10849564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 312
Target Start/End: Complemental strand, 29684333 - 29684211
Alignment:
Q  190 gttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatg 289  Q
    |||| |||||| || || ||||||||||| |||| || |||| |||||||| |||| ||||| |||||| |||||  |||||||| |  ||||  |||||    
T  29684333 gttgaaatttgaggcctaactcattcttataaaatcgttttgtaaggtgaggattgcctcctctttatatactcttctcaagagttttgtctaatcgatg 29684234  T
Q  290 taggacttgggtttttcccaata 312  Q
      | |||||||||||||||||||    
T  29684233 cggaacttgggtttttcccaata 29684211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 312
Target Start/End: Complemental strand, 39108230 - 39108080
Alignment:
Q  163 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 261  Q
    |||| ||||||| ||| ||| ||||| ||||| || ||| || ||||||||| ||||||||| ||  ||| |||||||  |||  ||||| | |||||||    
T  39108230 ccttgaattcgacaagctctgataccatgttgaaacttgaggcctgactcatccttacaaaatcggattgtaaggtgatgattacctcctctatataaac 39108131  T
Q  262 tctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||| ||||||| ||| || |||| ||||| |||||||  ||||||||||||    
T  39108130 tcttatcaagattcttatatatctgatgtgggacttgaatttttcccaata 39108080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 314
Target Start/End: Original strand, 14127240 - 14127301
Alignment:
Q  253 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaa 314  Q
    |||||||| ||| ||||||||||| || |||| ||||| |||||| ||||||||||||||||    
T  14127240 tttataaattcttatcaagagtcttatttatctgatgtgggacttcggtttttcccaataaa 14127301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 313
Target Start/End: Original strand, 18607273 - 18607366
Alignment:
Q  220 aaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    ||||||| || | ||||||||||||  ||||| |||||| |||||  | ||||||||  ||||||||||||  |||||| ||||||||||||||    
T  18607273 aaaaccggttcgtaaggtgagaattacctcctctttatatactcttcttaagagtcttgtctatccgatgtgagacttgtgtttttcccaataa 18607366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 21214190 - 21214275
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagt 274  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||    
T  21214190 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagt 21214275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 247 - 312
Target Start/End: Complemental strand, 21734473 - 21734408
Alignment:
Q  247 ctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||| |||||| |||||  |||||||||| ||||||||||||| |||  ||||||||||||||||    
T  21734473 ctcctctttatatactcttctcaagagtcttatctatccgatgtgggatgtgggtttttcccaata 21734408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 10485278 - 10485222
Alignment:
Q  220 aaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtct 276  Q
    ||||||| || | |||||||| |||||||||| | ||||||||||||||||||||||    
T  10485278 aaaaccggttcgtaaggtgaggattgtctcctctatataaactctcatcaagagtct 10485222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 218
Target Start/End: Original strand, 29695471 - 29695563
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattctta 218  Q
    |||||| || |||||||||||||| |||||||||| |||| ||||||| ||| ||| ||||| ||||  ||||||||| || |||||| ||||    
T  29695471 ctctttgggcttggtgcgtgaataggtttaggcagcccttgaattcgacaagctctgataccatgttaaaatttggggcctaactcatcctta 29695563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 189 - 261
Target Start/End: Complemental strand, 39108470 - 39108398
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 261  Q
    ||||| ||| |||||||| |||||| |||||||||||| |||  |||||||| |||||||||| | |||||||    
T  39108470 tgttgaaatatggggtctaactcatccttacaaaaccggtttataaggtgaggattgtctcctctatataaac 39108398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 296
Target Start/End: Original strand, 25286257 - 25286356
Alignment:
Q  197 tttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 296  Q
    ||||||| || |||||| ||||||||||||  ||| |||||||| | ||| |||| |||||||||||| ||||||  ||  ||||| ||||||| |||||    
T  25286257 tttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgtttcctctttataaactctgatcaagcttccaatctaaccgatgtgggact 25286356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 312
Target Start/End: Complemental strand, 28895629 - 28895519
Alignment:
Q  201 gggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttggg 300  Q
    |||||| |||||| ||||||||||||  ||| |||||||| | ||||| ||||||||||||||| ||| |||| |  |||| | | |||| ||| |||||    
T  28895629 gggtctaactcatccttacaaaaccggcttgtaaggtgaggagtgtct-ctttttataaactcttatctagagccctatcttttcaatgtgggatttggg 28895531  T
Q  301 tttttcccaata 312  Q
    ||||| ||||||    
T  28895530 ttttttccaata 28895519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 32810894 - 32810965
Alignment:
Q  218 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatg 289  Q
    |||||||||  ||| |||||||  |||||||||| |||||||||||| ||||||| ||  ||||||||||||    
T  32810894 acaaaaccggcttgtaaggtgatgattgtctcctctttataaactcttatcaagaatcctatctatccgatg 32810965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 296
Target Start/End: Complemental strand, 43169361 - 43169250
Alignment:
Q  185 tacctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatc 284  Q
    ||||||||| ||| ||||| || |||| | |||||||||| |  ||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||    
T  43169361 tacctgttgaaatatggggcctaactcttccttacaaaactggcttgaaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatc 43169262  T
Q  285 cgatgtaggact 296  Q
    |||||| |||||    
T  43169261 cgatgtgggact 43169250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 312
Target Start/End: Complemental strand, 10485216 - 10485170
Alignment:
Q  266 atcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||||||||| ||||||||||||| |||| ||| ||||||||||||    
T  10485216 atcaagagtcttatctatccgatgtgggacatggatttttcccaata 10485170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 304
Target Start/End: Original strand, 17265009 - 17265079
Alignment:
Q  234 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttt 304  Q
    ||||||| |||| ||||| | |||||||| | | ||||||||| ||||||||||||| |||| ||||||||    
T  17265009 aggtgaggattgcctcctctatataaacttttaccaagagtcttatctatccgatgtgggacatgggtttt 17265079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 37812272 - 37812330
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtc 247  Q
    |||||||||||||||||| |||||| ||||||||| ||| |||  ||||||| ||||||    
T  37812272 tgttgtaatttggggtctaactcatccttacaaaatcgacttgtgaggtgaggattgtc 37812330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 304
Target Start/End: Original strand, 38760315 - 38760421
Alignment:
Q  198 ttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 297  Q
    |||||| || ||||||  |||||||||||  ||| |||||||  | || ||||| |||||||||||| ||||||||||  ||||| | ||||  ||||||    
T  38760315 ttggggcctaactcatcgttacaaaaccggcttgtaaggtgacgagtgcctcctctttataaactcttatcaagagtcctatctacctgatgcgggactt 38760414  T
Q  298 gggtttt 304  Q
    |||||||    
T  38760415 gggtttt 38760421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 39108335 - 39108277
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtc 247  Q
    ||||| || |||||||||||||||| ||||||||||||  ||| |||||||| ||||||    
T  39108335 tgttgaaacttggggtctgactcatccttacaaaaccggcttgtaaggtgaggattgtc 39108277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 296
Target Start/End: Complemental strand, 11969161 - 11969060
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    ||||| ||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||||| || |||    
T  11969161 aattttgggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgacgtggga 11969062  T
Q  295 ct 296  Q
    ||    
T  11969061 ct 11969060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 5424770 - 5424822
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgag 240  Q
    |||||| |||||||||||| |||||| ||||||||||||  ||| ||||||||    
T  5424770 ctgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaggtgag 5424822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 233 - 285
Target Start/End: Complemental strand, 6986428 - 6986376
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatcc 285  Q
    |||||||| |||||||||| |||||||||||   |||||||||| ||||||||    
T  6986428 aaggtgaggattgtctcctctttataaactcctctcaagagtcttatctatcc 6986376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 7257088 - 7257200
Alignment:
Q  152 gtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctga-ctcattcttacaaaaccgatttgcaaggtgagaattgtctc 249  Q
    |||||||| | |||| ||||||| ||| ||| ||||| ||||| |||| |||| || | ||||| ||||||||||||||||| ||| |||| ||||  ||    
T  7257088 gtttaggcggcccttgaattcgacaagctctgataccatgttgaaattgggggcctaaactcatccttacaaaaccgatttgtaagatgaggattgcatc 7257187  T
Q  250 ctttttataaact 262  Q
    || ||||||||||    
T  7257188 ctctttataaact 7257200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 188 - 312
Target Start/End: Original strand, 13839247 - 13839371
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    |||||| |||||| ||||| |||| |  | |||||||||  ||| |||||||| |||| ||| | |||| |||||||  ||||||||||  |||||||||    
T  13839247 ctgttgaaatttgaggtctaactcgtcatcacaaaaccggattgtaaggtgaggattgcctcatctttagaaactcttctcaagagtcttgtctatccga 13839346  T
Q  288 tgtaggacttgggtttttcccaata 312  Q
    |||   ||||| |||||||| ||||    
T  13839347 tgtgaaacttgagtttttccaaata 13839371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 208 - 296
Target Start/End: Original strand, 21213893 - 21213981
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 296  Q
    |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||| |||| |||||    
T  21213893 actcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccaatgtgggact 21213981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 22447222 - 22447178
Alignment:
Q  182 taatacctgttgtaatttggggtctgactcattcttacaaaaccg 226  Q
    |||||| ||||| |||||||||||| |||||| ||||||||||||    
T  22447222 taatacatgttgaaatttggggtctaactcatccttacaaaaccg 22447178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 1e-36; HSPs: 81)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 127 - 312
Target Start/End: Original strand, 29273151 - 29273337
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  29273151 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 29273250  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |  ||| |||||||| |||| ||||  ||||||||||||  ||||||||||  |||||||||||| |||||||||||||||||||||    
T  29273251 ggcttgtaaggtgaggattgcctcccctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 29273337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 127 - 312
Target Start/End: Original strand, 39649010 - 39649196
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| |||||||| | |||| |||| || ||| ||| |||   ||||| |||||||||  | |||||| |||||||||||    
T  39649010 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaatttgacaagctctgatattatgttgaaatttggggcataactcatccttacaaaacc 39649109  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||    
T  39649110 ggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 39649196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 137 - 304
Target Start/End: Original strand, 43361693 - 43361861
Alignment:
Q  137 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaag 235  Q
    |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||  |||||| |||||| ||||||||||||  ||| |||    
T  43361693 ttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaattgagggtctaactcatccttacaaaaccggcttgtaag 43361792  T
Q  236 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttt 304  Q
    ||||| ||||  |||| ||||||||||||  ||||||||||  |||||||||||| |||||||||||||    
T  43361793 gtgaggattgcttcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttt 43361861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 189 - 312
Target Start/End: Complemental strand, 1234041 - 1233918
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||||||||| ||||||  | ||||||||   |||  ||||||| | |||||||| ||||||||||||||||||||||||||||||||||||    
T  1234041 tgttgaaatttggggtctaactcatcatcacaaaaccagcttgtgaggtgaggagtgtctcctctttataaactctcatcaagagtctcatctatccgat 1233942  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||||||||||| ||||||    
T  1233941 gtgggacttgggtttttaccaata 1233918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 189 - 307
Target Start/End: Original strand, 41812647 - 41812765
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||| |||||| |||||| || |||||||||| ||| || ||||||| |||||||| ||||||||||||||||||||||||||| ||||| ||    
T  41812647 tgttgaaatttcgggtctaactcatcctcacaaaaccgacttgtaaagtgagaagtgtctcctctttataaactctcatcaagagtctcatttatccaat 41812746  T
Q  289 gtaggacttgggtttttcc 307  Q
    ||  |||||||||||||||    
T  41812747 gtgagacttgggtttttcc 41812765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 127 - 290
Target Start/End: Complemental strand, 15391997 - 15391833
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| ||||||||||     
T  15391997 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggccttactcatccttacaaaact 15391898  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 290  Q
    |  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| |||||||||||||    
T  15391897 ggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgt 15391833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 127 - 313
Target Start/End: Original strand, 21428192 - 21428380
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagttt-aggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaac 224  Q
    |||||| || |||||||||||||| |||| | || | |||| ||||||| ||| ||||||||| ||||| ||||||||| || |||||| || |||| ||    
T  21428192 ctctttgggcttggtgcgtgaatatgttttaagcggcccttgaattcgacaagctctaataccatgttgaaatttggggcctaactcatcctcacaatac 21428291  T
Q  225 cgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    ||| ||| ||||| || |||||||||| | |||||||||| ||||||| ||| |||| || ||||||| |||||| |||||||||||||    
T  21428292 cgacttgtaaggtaaggattgtctcctctgtataaactcttatcaagaatcttatctttctgatgtagaacttggctttttcccaataa 21428380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 52846838 - 52846961
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||||||  | |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| |||||||||||    
T  52846838 tgttgaaatttggggcttaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgat 52846937  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||||||||||||||||||    
T  52846938 gtgggacttgggtttttcccaata 52846961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 189 - 315
Target Start/End: Complemental strand, 5222809 - 5222683
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||| |||||| |||||| |||| |||||||  ||| |||||||| |||||||||| |  ||||||||| ||||||||||| ||||||| |||    
T  5222809 tgttgaaatttagggtctaactcatccttataaaaccggcttgtaaggtgaggattgtctcctctacataaactcttatcaagagtcttatctatcagat 5222710  T
Q  289 gtaggacttgggtttttcccaataaag 315  Q
    || |||||| |||||||||||||||||    
T  5222709 gtgggacttaggtttttcccaataaag 5222683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 190 - 312
Target Start/End: Complemental strand, 15392139 - 15392017
Alignment:
Q  190 gttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatg 289  Q
    |||| ||||||||| || |||||| ||||||||||||  ||| || ||||| |||| ||||| |||||| |||||  |||||||||| ||||||||||||    
T  15392139 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatg 15392040  T
Q  290 taggacttgggtttttcccaata 312  Q
    | |||||||||||||||||||||    
T  15392039 tgggacttgggtttttcccaata 15392017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 21428047 - 21428170
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||| || || |||||| || ||||||||| |||| ||||| || |||||| ||||| |||||||||| ||||||||||| |||||||| ||    
T  21428047 tgttgaaatttgagggctaactcatcctcacaaaaccggtttgtaaggtaaggattgtcacctttatataaactcttatcaagagtcttatctatccaat 21428146  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    ||||||||||  ||||||||||||    
T  21428147 gtaggacttgaatttttcccaata 21428170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 43361541 - 43361656
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||| ||||||| |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  ||||||||||    
T  43361541 tgttgaaattgggggtctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgat 43361640  T
Q  289 gtaggacttgggtttt 304  Q
    || |||||||||||||    
T  43361641 gtgggacttgggtttt 43361656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 195 - 312
Target Start/End: Original strand, 22892683 - 22892800
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    ||||||||| || |||||| ||||||||||||  |||  ||| ||| | |||||||| |||||||| |||||||||||||||||| |||  ||||| |||    
T  22892683 aatttggggcctaactcatccttacaaaaccggcttgtgaggcgaggagtgtctcctctttataaagtctcatcaagagtctcatttatttgatgtggga 22892782  T
Q  295 cttgggtttttcccaata 312  Q
    ||||||||||||||||||    
T  22892783 cttgggtttttcccaata 22892800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 24382349 - 24382472
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || | ||||  | |||||||||| |||  || |||| | || ||||| ||||||||||||||||||||||||||| ||||||||    
T  24382349 tgttgaaatttggggcctaattcatcatcacaaaaccgacttgtgagatgaggagtgcctcctctttataaactctcatcaagagtctcatttatccgat 24382448  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || ||| |||||||||||||||||    
T  24382449 gttggatttgggtttttcccaata 24382472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 48558310 - 48558433
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||||||  | |||||| ||||||||||||  ||| |||||||| ||||  |||| |||||| |||||  |||||||||| |||||||||||    
T  48558310 tgttgaaatttggggcttaactcatccttacaaaaccggcttgtaaggtgaggattgcttcctctttatatactcttctcaagagtcttatctatccgat 48558409  T
Q  289 gtaggacttgggtttttcccaata 312  Q
     | |||||||||||||||||||||    
T  48558410 atgggacttgggtttttcccaata 48558433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 163 - 312
Target Start/End: Original strand, 38871117 - 38871267
Alignment:
Q  163 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 261  Q
    |||| ||||||| ||| ||| ||||| ||||| |||||| || || || ||| |||||||||||| ||   |||||||| | || ||||| |||||||||    
T  38871117 ccttgaattcgacaagctctgataccatgttgaaatttgaggcctaacgcatccttacaaaaccggttcttaaggtgaggagtgcctcctctttataaac 38871216  T
Q  262 tctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    | | ||||||||||| ||||||| ||||| |||||||||||||||||||||    
T  38871217 ttttatcaagagtcttatctatctgatgtgggacttgggtttttcccaata 38871267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 188 - 312
Target Start/End: Original strand, 2997044 - 2997168
Alignment:
Q  188 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 287  Q
    |||||| ||||||||| || |||||| ||||||||||||  |||  ||||||| |||  ||||| |||||| |||||  |||||||| | ||||||||||    
T  2997044 ctgttgaaatttggggcctaactcatccttacaaaaccggcttgtgaggtgagtattacctcctctttatatactcttctcaagagttttatctatccga 2997143  T
Q  288 tgtaggacttgggtttttcccaata 312  Q
    ||| |||||| ||||||||||||||    
T  2997144 tgtgggacttaggtttttcccaata 2997168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 189 - 313
Target Start/End: Complemental strand, 13959517 - 13959393
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| |||| ||||||   ||| ||||||| |||||| |||| ||||||||||||  |||||||||| |||||||||||    
T  13959517 tgttgaaatttggggcctaactcatccttaaaaaaccagcttgtaaggtgaaaattgtatcctctttataaactcttctcaagagtcttatctatccgat 13959418  T
Q  289 gtaggacttgggtttttcccaataa 313  Q
    ||  |||||| ||| ||||||||||    
T  13959417 gtgagacttgcgttattcccaataa 13959393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 29413419 - 29413340
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| | || ||||| |||||||||||| ||||||||||| ||||| |||| ||||||||||||||||||||||||    
T  29413419 aaggtgaggagtgcctcctctttataaactcttatcaagagtcttatctacccgaagtaggacttgggtttttcccaata 29413340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 52921500 - 52921579
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| | || |||||||||||||||||||| |||||||   ||||||||||||| |||||||||||||||||||||    
T  52921500 aaggtgaggaatgcctcctttttataaactctcaccaagagtactatctatccgatgtgggacttgggtttttcccaata 52921579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 195 - 312
Target Start/End: Original strand, 21538929 - 21539046
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    ||||||||| || | |||| |||||||||||| |||| |||||||| |||| ||||| |||||||| |||  |||||||||| || |||||||| | |||    
T  21538929 aatttggggcctaaatcatccttacaaaaccggtttgtaaggtgaggattgcctcctctttataaattcttctcaagagtcttatttatccgatatggga 21539028  T
Q  295 cttgggtttttcccaata 312  Q
    | ||| ||||||||||||    
T  21539029 catggatttttcccaata 21539046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 195 - 304
Target Start/End: Original strand, 33342273 - 33342382
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 294  Q
    ||||| |||||| |||||| ||||||||||||  ||| ||||||||  ||  ||||| |||||| |||||  |||||||||||||||||| ||||| |||    
T  33342273 aatttagggtctaactcatccttacaaaaccggcttgtaaggtgaggtttacctcctctttatatactcttctcaagagtctcatctatctgatgtggga 33342372  T
Q  295 cttgggtttt 304  Q
    ||||||||||    
T  33342373 cttgggtttt 33342382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 313
Target Start/End: Complemental strand, 11018969 - 11018845
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||| ||||| |||||| ||||||||| |||||||  ||| ||  |||||||||| ||||||||||||  |||||||||| |  |||| |||    
T  11018969 tgttgaaatttgaggtctaactcatccttacaaaatcgatttgtgaggggaagattgtctcctctttataaactcttctcaagagtcttagttatctgat 11018870  T
Q  289 gtaggacttgggtttttcccaataa 313  Q
    || |||||||  |||||||||||||    
T  11018869 gtgggacttgaatttttcccaataa 11018845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 22826778 - 22826850
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttttt 305  Q
    |||||||| |||||||||| | |||||||||| ||||||||||| ||||||||||||| |||| |||||||||    
T  22826778 aaggtgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggttttt 22826850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 39648906 - 39648989
Alignment:
Q  228 tttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||| |||||||| |||| ||||| ||||||||||||  |||||||||| |||||| |||||| |||||||||||||||||||||    
T  39648906 tttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctat-cgatgtgggacttgggtttttcccaata 39648989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 2697320 - 2697427
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||||||||| |||| | ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||||||  |||||||||||    
T  2697320 tgttgaaatttggggtctaactcgtccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgat 2697419  T
Q  289 gtaggact 296  Q
    || |||||    
T  2697420 gtgggact 2697427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 189 - 312
Target Start/End: Complemental strand, 9381015 - 9380892
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |  ||||| ||||||| || ||| || ||| |  ||||||||||  ||||||||||    
T  9381015 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtattgtgaggattgtcttctctttttatactattctcaagagtcttgtctatccgat 9380916  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    || |||||||||||||||||||||    
T  9380915 gtgggacttgggtttttcccaata 9380892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 17419902 - 17419795
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||||||    
T  17419902 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgat 17419803  T
Q  289 gtaggact 296  Q
    || |||||    
T  17419802 gtgggact 17419795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 127 - 245
Target Start/End: Original strand, 29272992 - 29273111
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  29272992 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 29273091  T
Q  226 gatttgcaaggtgagaattg 245  Q
    |  ||| |||||||| ||||    
T  29273092 ggcttgtaaggtgaggattg 29273111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 226
Target Start/End: Original strand, 5325069 - 5325159
Alignment:
Q  137 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccg 226  Q
    |||||||||||||| |||||| | | |||| ||||||||||| ||| ||||| ||||||||||||| |||| |||||| ||||||||||||    
T  5325069 ttggtgcgtgaataggtttagacggcccttgaattcgataagctctgataccatgttgtaatttggagtctaactcatccttacaaaaccg 5325159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 168 - 312
Target Start/End: Original strand, 2997228 - 2997373
Alignment:
Q  168 aattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctca 266  Q
    ||||||| ||| ||||||||| ||||| ||||||||| || ||||||  |||||||||||  ||   ||||||| |||| ||| | |||||| |||||      
T  2997228 aattcgagaagctctaataccatgttgaaatttggggcctaactcatctttacaaaaccggcttatgaggtgaggattgcctcatctttatatactcttc 2997327  T
Q  267 tcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||||| ||||||||||||| ||| ||| |||||||| ||||    
T  2997328 tcaagagtcttatctatccgatgtgggatttgagtttttcctaata 2997373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 4022114 - 4022221
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| |||||||||| |  ||| |||||||| | || ||||| ||||||||||||  |||||||||  |||||||||||    
T  4022114 tgttgaaatttggggcctaactcatccttacaaaactggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgat 4022213  T
Q  289 gtaggact 296  Q
    || |||||    
T  4022214 gtgggact 4022221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 313
Target Start/End: Complemental strand, 45395602 - 45395543
Alignment:
Q  254 ttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    ||||||||||| ||||||||||| ||||||| ||| | ||||||||||||||||||||||    
T  45395602 ttataaactcttatcaagagtcttatctatctgatatgggacttgggtttttcccaataa 45395543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 242 - 312
Target Start/End: Original strand, 24382193 - 24382263
Alignment:
Q  242 attgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||||||||| ||| ||| |||  |||||||||| ||||||||||||| ||||||||| |||||||||||    
T  24382193 attgtctccttattaaaaattcttctcaagagtcttatctatccgatgtgggacttgggattttcccaata 24382263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 218 - 312
Target Start/End: Complemental strand, 49142767 - 49142674
Alignment:
Q  218 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||||  ||| ||||||| || | ||| || |||||||||| ||||||| ||||| |||||||| |||| |||||||||||||||||||||    
T  49142767 acaaaaccggcttgtaaggtgataaatttcttctctttataaactatcatcaa-agtcttatctatccaatgtgggacttgggtttttcccaata 49142674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 208 - 312
Target Start/End: Complemental strand, 25799217 - 25799112
Alignment:
Q  208 actcattcttacaaaaccgatt-tgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttc 306  Q
    |||||| |||||||||||  || || |||||||| |||| | ||| ||||||||||||  |||||||| | ||||||| ||||| |||| ||||||||||    
T  25799217 actcatccttacaaaaccagttctgtaaggtgaggattgccccctctttataaactcttctcaagagttttatctatctgatgtgggacatgggtttttc 25799118  T
Q  307 ccaata 312  Q
    ||||||    
T  25799117 ccaata 25799112  T

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Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 296
Target Start/End: Complemental strand, 38474379 - 38474291
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 296  Q
    |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||| ||  |||||||||||||||||||    
T  38474379 actcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttgtcaagaatcctatctatccgatgtaggact 38474291  T

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Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 38870938 - 38871062
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||| || || |||||| |||||||||||| ||   |||||||| | || ||||  |||||||||| | ||||||||||| ||| ||| |||    
T  38870938 tgttgaaatttgaggcctaactcatccttacaaaaccggttcttaaggtgaggagtgcctccactttataaacttttatcaagagtcttatcgatctgat 38871037  T
Q  289 gtaggactt-gggtttttcccaata 312  Q
    || |||||| |||||||||||||||    
T  38871038 gtgggacttggggtttttcccaata 38871062  T

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Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 8520082 - 8520189
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||||||||| ||||||  |||||||||||  ||| |||||||| | || ||| | ||||||||||||  ||||||||   |||||||||||    
T  8520082 tgttgaaatttggggtctaactcatctttacaaaaccggcttgtaaggtgaggagtgcctcttctttataaactcttctcaagagtgctatctatccgat 8520181  T
Q  289 gtaggact 296  Q
    || |||||    
T  8520182 gtgggact 8520189  T

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Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 234 - 313
Target Start/End: Complemental strand, 11590490 - 11590411
Alignment:
Q  234 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    ||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| ||||| |||||| ||| |||||    
T  11590490 aggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggactcgggtttctcctaataa 11590411  T

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Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 189 - 284
Target Start/End: Complemental strand, 15013640 - 15013545
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatc 284  Q
    ||||| ||||||||| || ||||||| |||||||||||  ||| |||||||||| ||||| || |||||||||| |  |||||||||  |||||||    
T  15013640 tgttgaaatttggggcctaactcatttttacaaaaccggcttgtaaggtgagaagtgtcttctctttataaactgttctcaagagtcatatctatc 15013545  T

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Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 217 - 312
Target Start/End: Original strand, 20428991 - 20429086
Alignment:
Q  217 tacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||||||||   |||||||||| ||  |||| |||||||||| | ||||||||||| || |||||||||| |||||||| | ||| ||||||    
T  20428991 tacaaaaccgattcataaggtgagaaatgcttcctctttataaactattatcaagagtcttatgtatccgatgtgggacttggatgttttccaata 20429086  T

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Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 253 - 312
Target Start/End: Complemental strand, 29265969 - 29265910
Alignment:
Q  253 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||| |||||  |||||||||| ||| ||||||||| |||||||||||||||||||||    
T  29265969 tttatatactcttctcaagagtcttatccatccgatgtgggacttgggtttttcccaata 29265910  T

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Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 195 - 290
Target Start/End: Complemental strand, 40664319 - 40664224
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 290  Q
    |||||||||||| || ||| ||||||||||||  ||| |||| ||| | || ||||| |||||||||||| ||||||||||  ||||| |||||||    
T  40664319 aatttggggtctaacacatccttacaaaaccggcttgtaaggcgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccgatgt 40664224  T

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Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 195 - 290
Target Start/End: Complemental strand, 43423388 - 43423293
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 290  Q
    ||||||||| || |||||| |||||||||| |  ||| |||||||| | || ||||| ||||||||||||  |||||||| | |||||||||||||    
T  43423388 aatttggggcctaactcatccttacaaaactggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgttatctatccgatgt 43423293  T

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Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 271
Target Start/End: Original strand, 21638255 - 21638337
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaag 271  Q
    ||||| ||||||||| || |||||| |||||||||||   ||| |||||||| | |||||||| |||||||||||| ||||||    
T  21638255 tgttgaaatttggggcctaactcatccttacaaaaccatcttgtaaggtgaggagtgtctcctctttataaactctgatcaag 21638337  T

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Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 312
Target Start/End: Original strand, 24382602 - 24382680
Alignment:
Q  234 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||||| |||| ||||  ||||||||||||  | |||||||| ||||||||||||| |||||||| |||||| |||||    
T  24382602 aggtgagtattgcctccagtttataaactctttttaagagtcttatctatccgatgtgggacttggttttttctcaata 24382680  T

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Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 310
Target Start/End: Complemental strand, 29413198 - 29413136
Alignment:
Q  248 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaa 310  Q
    |||| |||||||||||| ||||||||||| ||||| |||| || |||||||||| ||||||||    
T  29413198 tcctctttataaactcttatcaagagtcttatctacccgaagtgggacttgggtctttcccaa 29413136  T

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Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 24131876 - 24131957
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtct 276  Q
    |||||||||||| ||||||||||| ||||| |  ||| ||| |||| |||| ||||| ||||||||||||  ||||||||||    
T  24131876 aatttggggtctaactcattcttataaaactggcttgtaagttgaggattgcctcctctttataaactcttctcaagagtct 24131957  T

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Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 312
Target Start/End: Complemental strand, 39648872 - 39648827
Alignment:
Q  267 tcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||    
T  39648872 tcaagagtcttatctatccgatgtgggacttgggattttcccaata 39648827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 127 - 251
Target Start/End: Complemental strand, 46098655 - 46098530
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| |||||||| | |||||||||||| ||| | | ||||| ||||  ||||||||| || |||||| ||| |||||||    
T  46098655 ctctttgggcttggtgcgtgaataggtttaggcggcccttaaattcgacaagctttgataccatgttaaaatttggggcctaactcatccttgcaaaacc 46098556  T
Q  226 gatttgcaaggtgagaattgtctcct 251  Q
    |  ||| | |||||| |||| |||||    
T  46098555 ggcttgtatggtgaggattgcctcct 46098530  T

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Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 310
Target Start/End: Complemental strand, 49828722 - 49828665
Alignment:
Q  253 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaa 310  Q
    |||||||| ||| ||||||||||  ||||||| ||||| |||||||||||||||||||    
T  49828722 tttataaaatcttatcaagagtcctatctatcagatgtgggacttgggtttttcccaa 49828665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 313
Target Start/End: Complemental strand, 11581826 - 11581746
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    |||||||  |||| ||||| |||||| | | ||||||||||||| ||||||||||||| ||| ||| |||||| |||||||    
T  11581826 aaggtgatgattgcctcctctttatatattttcatcaagagtcttatctatccgatgtgggatttgagttttttccaataa 11581746  T

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Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 296
Target Start/End: Complemental strand, 20735851 - 20735763
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 296  Q
    |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  || ||||||| ||||||| ||||| |||||    
T  20735851 actcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctactcgagagtcttatctatctgatgtgggact 20735763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 312
Target Start/End: Original strand, 28119750 - 28119854
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 307  Q
    |||||| |||||||||  ||||   |||||||||| || || || |||||||||||| ||||||||||| ||| |||  |||||| |||||| |||||||    
T  28119750 actcatccttacaaaatagattcataaggtgagaaatggctactctttataaactcttatcaagagtcttatccatctaatgtagaacttggatttttcc 28119849  T
Q  308 caata 312  Q
     ||||    
T  28119850 taata 28119854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 312
Target Start/End: Original strand, 42845069 - 42845133
Alignment:
Q  248 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||| |||||||||||| ||||||||||| ||||||| ||||| | ||||| |||||||| ||||    
T  42845069 tcctctttataaactcttatcaagagtcttatctatctgatgtggtacttgagtttttcctaata 42845133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 312
Target Start/End: Complemental strand, 45982238 - 45982174
Alignment:
Q  248 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||| |||||||||| | ||||||||| | ||||||| || || |||||||||||||||||||||    
T  45982238 tcctctttataaacttttatcaagagttttatctatctgacgttggacttgggtttttcccaata 45982174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 47377909 - 47377827
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcat---caagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| |||||||||| | |||||||| | ||   ||||||||| ||||||||||||| |||| || |||||||||||||    
T  47377909 aaggtgaggattgtctcctctatataaactattattatcaagagtcttatctatccgatgtgggacatgagtttttcccaata 47377827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 9381214 - 9381099
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| |||||||| |||  ||| |||||||| |||| || || ||| || |||||  ||||||||||  ||||||||||    
T  9381214 tgttgaaatttggggcctaactcatccttacaaagccggcttgtaaggtgaggattgccttctctttttatactcttctcaagagtcttgtctatccgat 9381115  T
Q  289 gtaggacttgggtttt 304  Q
    || ||| || ||||||    
T  9381114 gtgggatttaggtttt 9381099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 305
Target Start/End: Complemental strand, 15391818 - 15391747
Alignment:
Q  234 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttttt 305  Q
    ||||||| |||| ||||| |||||| ||| |  |||||||||| ||||||||||||| |||||||| |||||    
T  15391818 aggtgaggattgcctcctctttatatacttttctcaagagtcttatctatccgatgtgggacttggtttttt 15391747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 31305826 - 31305719
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||| | || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   ||||||| |||    
T  31305826 tgttgaaatttggagcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatcggat 31305727  T
Q  289 gtaggact 296  Q
    || |||||    
T  31305726 gtgggact 31305719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 312
Target Start/End: Complemental strand, 36332362 - 36332303
Alignment:
Q  253 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||||||| |||||||||   |||||||| |||| ||||||| |||||||||||||    
T  36332362 tttataaactctaatcaagagttctatctatccaatgtgggacttgcgtttttcccaata 36332303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 47086310 - 47086389
Alignment:
Q  233 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||| | |||||| | | |||||||||| ||||||||||| ||||||| ||||| |||| ||| ||||| ||||||    
T  47086310 aaggtgaggagtgtctcatgtatataaactcttatcaagagtcttatctatctgatgtgggacatggattttttccaata 47086389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 312
Target Start/End: Complemental strand, 49895437 - 49895345
Alignment:
Q  218 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||||||||||||  |  |||| | || |||||||||||||||  ||||||||||||||||||||| ||  || |||||| |||||| ||||||    
T  49895437 acaaaaccgatttgtgaaatgaggagtgcctcctttttataaacgatcatcaagagtctcatctatctga--tatgacttgagttttttccaata 49895345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 275
Target Start/End: Complemental strand, 12233398 - 12233312
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtc 275  Q
    ||||||||||||||| || |||||| |||| |||||||  ||| |||||||| | |  ||||| ||||||||||||  |||||||||    
T  12233398 tgttgtaatttggggccttactcatccttataaaaccggcttgtaaggtgaggagtacctcctctttataaactcttctcaagagtc 12233312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 22892495 - 22892533
Alignment:
Q  274 tctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  22892495 tctcatctatctgatgtgggacttgggtttttcccaata 22892533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 289
Target Start/End: Original strand, 27957804 - 27957898
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatg 289  Q
    |||||||||||| |||||| ||||||||||||  ||| | |||||| |  ||||||| |||||||||| |  |||||| || |||||||| ||||    
T  27957804 aatttggggtctaactcatccttacaaaaccggcttgtacggtgaggagcgtctcctctttataaacttttctcaagaatcccatctatcagatg 27957898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 312
Target Start/End: Complemental strand, 36331962 - 36331907
Alignment:
Q  253 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||||||| |||||||||    ||||||| |||| |||||||||||||||||||||    
T  36331962 tttataaactcttatcaagagt----tctatccaatgtgggacttgggtttttcccaata 36331907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 312
Target Start/End: Complemental strand, 12314615 - 12314570
Alignment:
Q  267 tcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    ||||||||||  |||||||||||| |||||||| ||||||||||||    
T  12314615 tcaagagtcttgtctatccgatgtgggacttggatttttcccaata 12314570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 312
Target Start/End: Complemental strand, 18374570 - 18374517
Alignment:
Q  259 aactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||||||||| ||||||  |||||||| |||| ||||||||||||||| |||||    
T  18374570 aactctcatcgagagtcctatctatccaatgtgggacttgggtttttctcaata 18374517  T

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Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 20735637 - 20735552
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagt 274  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||| |||  ||||||||    
T  20735637 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaattcttctcaagagt 20735552  T

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Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 268
Target Start/End: Original strand, 22892428 - 22892501
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatc 268  Q
    ||||||||| || |||||| ||||||||||||  |||  ||||||| | || ||||| ||||||||||||||||    
T  22892428 aatttggggcctaactcatccttacaaaaccggattgtgaggtgaggagtgcctcctctttataaactctcatc 22892501  T

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Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 33879767 - 33879852
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagt 274  Q
    ||||| ||||||||| || |||||| |||||||||||   ||| |||||||| | || ||||| ||||||||||||  ||||||||    
T  33879767 tgttgaaatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggagtggctcctctttataaactcttctcaagagt 33879852  T

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Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 33964488 - 33964403
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagt 274  Q
    ||||| ||||||||| || |||||| |||||||||||   ||| |||||||| | || ||||| ||||||||||||  ||||||||    
T  33964488 tgttgaaatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggagtggctcctctttataaactcttctcaagagt 33964403  T

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Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 300
Target Start/End: Original strand, 10017376 - 10017428
Alignment:
Q  248 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttggg 300  Q
    |||| |||||||||||| ||||||||||| ||||||| ||||| | |||||||    
T  10017376 tcctctttataaactcttatcaagagtcttatctatctgatgtggcacttggg 10017428  T

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Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 226
Target Start/End: Complemental strand, 12314549 - 12314449
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || || ||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||  ||| || |||||| |||||||||||    
T  12314549 ctctttgggcttagtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaattcagggcctaactcatccttacaaaacc 12314450  T
Q  226 g 226  Q
    |    
T  12314449 g 12314449  T

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Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 290
Target Start/End: Original strand, 13356911 - 13357007
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttt-tataaactctcatcaagagtctcatctatccgatgt 290  Q
    ||||| |||||| |||||||| ||||||||||  ||| ||||| || | || |||||||| |||||||||| |||||| |||  ||||| |||||||    
T  13356911 aatttagggtctaactcattcctacaaaaccggcttgtaaggttaggagtgcctccttttttataaactcttatcaagcgtcatatctaaccgatgt 13357007  T

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Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 208 - 296
Target Start/End: Original strand, 19937051 - 19937139
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 296  Q
    |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||| |   ||||||||||||| |||||    
T  19937051 actcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaattctatctatccgatgtgggact 19937139  T

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Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 312
Target Start/End: Original strand, 20429283 - 20429347
Alignment:
Q  248 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |||| |||||||||||| ||||||||||| ||| ||||||| | |||||| || ||| |||||||    
T  20429283 tcctctttataaactcttatcaagagtcttatccatccgatctgggacttaggctttacccaata 20429347  T

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Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 275
Target Start/End: Original strand, 35024242 - 35024322
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtc 275  Q
    ||||||||| || || ||| ||||||||||||   || |||||||| | || ||||| |||||||||||| ||||||||||    
T  35024242 aatttggggcctaacccatccttacaaaaccggcctgtaaggtgaggagtgcctcctgtttataaactcttatcaagagtc 35024322  T

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Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 208 - 296
Target Start/End: Complemental strand, 45858751 - 45858663
Alignment:
Q  208 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 296  Q
    |||||| |||| |||||||| ||| | |||||| | || ||||| ||||||||||||  |||||| ||  ||||||||||||| |||||    
T  45858751 actcatccttataaaaccgacttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggact 45858663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 127 - 312
Target Start/End: Complemental strand, 13484 - 13298
Alignment:
Q  127 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 225  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| |||| |||| || |||||| || ||||||||    
T  13484 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaattcggggcctaactcatcctcacaaaacc 13385  T
Q  226 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 312  Q
    |  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| |||| || |||||||||||||    
T  13384 ggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacctgagtttttcccaata 13298  T

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Target: scaffold0434; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 189 - 312
Target Start/End: Complemental strand, 13628 - 13505
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||| |||| || |||||| ||  ||||||||  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  ||||||||||    
T  13628 tgttgaaattcggggcctaactcatcctcgcaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgat 13529  T
Q  289 gtaggacttgggtttttcccaata 312  Q
     | |||||||||||||||||||||    
T  13528 ttgggacttgggtttttcccaata 13505  T

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Target: scaffold0029 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 76967 - 76851
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||||||||||||| || ||||||  |||||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| |||||||||||    
T  76967 tgttgtaatttggggcctaactcatctttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgat 76868  T
Q  289 gtaggacttgggttttt 305  Q
    || ||||||||||||||    
T  76867 gtgggacttgggttttt 76851  T

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Target: scaffold0989 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 189 - 311
Target Start/End: Original strand, 2936 - 3058
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| ||||||||| || |||||| |||||||||||   ||| || ||||| |||| ||||| ||||||||||||  ||||||||||  ||||||||||    
T  2936 tgttgaaatttggggcctaactcatccttacaaaaccagcttgtaaagtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgat 3035  T
Q  289 gtaggacttgggtttttcccaat 311  Q
    || ||||||||||||||||||||    
T  3036 gtgggacttgggtttttcccaat 3058  T

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Target: scaffold0054 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 21252 - 21376
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||| || || |||||| ||||||||||| | ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  ||||||||||    
T  21252 tgttgaaatttgaggcctaactcatccttacaaaaccaacttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgat 21351  T
Q  289 gtaggacttgggt-ttttcccaata 312  Q
    || |||||||||| |||||||||||    
T  21352 gtgggacttgggtattttcccaata 21376  T

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Target: scaffold0054; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 11338 - 11392
Alignment:
Q  195 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctc 249  Q
    ||||| |||||| |||||||||||||||||||| ||| |||||||| | ||||||    
T  11338 aatttagggtctaactcattcttacaaaaccgacttgtaaggtgaggagtgtctc 11392  T

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Target: scaffold1138 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 1862 - 1978
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||||| ||||| |||||| ||||||||||||  ||| |||||||  | || |||||   |||||||||| ||||||||||| |||||||||||    
T  1862 tgttgaaatttgaggtctaactcatgcttacaaaaccggcttgtaaggtgaagagtgcctcctcggtataaactcttatcaagagtcttatctatccgat 1961  T
Q  289 gtaggacttgggttttt 305  Q
    ||  |||||||||||||    
T  1962 gtgagacttgggttttt 1978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 13621 - 13744
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 288  Q
    ||||| |||| ||||||| |||||  ||||||||||||  ||| |||||||| |||| ||| | ||||||  ||||  ||||||||||||||||||||||    
T  13621 tgttgaaattgggggtctaactcaaccttacaaaaccggcttgtaaggtgaggattgcctcgtctttatattctcttctcaagagtctcatctatccgat 13720  T
Q  289 gtaggacttgggtttttcccaata 312  Q
    ||  |||||| ||||| |||||||    
T  13721 gtgtgacttgagttttccccaata 13744  T

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Target: scaffold0060; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 311
Target Start/End: Complemental strand, 59579 - 59518
Alignment:
Q  247 ctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaat 311  Q
    ||||| |||||| |||||  ||||||||   ||||||||||||| ||||||||||||||||||||    
T  59579 ctcctctttatatactcttctcaagagt---atctatccgatgtgggacttgggtttttcccaat 59518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 189 - 264
Target Start/End: Original strand, 4228 - 4303
Alignment:
Q  189 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactct 264  Q
    |||||||||||||||||| |||||| ||||||||||||  ||| |||||||| |||  ||||| |||||| |||||    
T  4228 tgttgtaatttggggtctaactcatccttacaaaaccggcttgtaaggtgaggattacctcctctttatatactct 4303  T

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Target: scaffold0339 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 15696 - 15765
Alignment:
Q  244 tgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 313  Q
    |||||||| |||||||||||| ||||| | ||| ||||||  ||||| | ||||||||||||||| ||||    
T  15696 tgtctcctatttataaactcttatcaaaaatcttatctatttgatgtggtacttgggtttttcccgataa 15765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 34507 - 34567
Alignment:
Q  202 ggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaact 262  Q
    ||||| |||||||||||||||||||  ||| | |||||| | |||||||| ||||||||||    
T  34507 ggtctaactcattcttacaaaaccggcttgtacggtgaggagtgtctcctctttataaact 34567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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