View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21686_high_13 (Length: 312)

Name: NF21686_high_13
Description: NF21686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21686_high_13
NF21686_high_13
[»] chr4 (75 HSPs)
chr4 (37-312)||(56505540-56505821)
chr4 (180-304)||(50678775-50678899)
chr4 (184-312)||(50679350-50679478)
chr4 (174-312)||(56506500-56506638)
chr4 (187-312)||(36096401-36096526)
chr4 (183-312)||(43051178-43051307)
chr4 (183-312)||(36095816-36095944)
chr4 (187-312)||(43050610-43050735)
chr4 (184-286)||(16555768-16555871)
chr4 (182-312)||(45830124-45830252)
chr4 (185-312)||(11529169-11529296)
chr4 (182-286)||(3930431-3930535)
chr4 (182-286)||(28196344-28196448)
chr4 (179-286)||(4239318-4239425)
chr4 (183-286)||(9023632-9023735)
chr4 (183-286)||(28196725-28196828)
chr4 (181-286)||(9380693-9380798)
chr4 (185-286)||(25161879-25161980)
chr4 (182-286)||(39744417-39744521)
chr4 (184-286)||(9380307-9380409)
chr4 (184-286)||(32703602-32703704)
chr4 (187-286)||(13198606-13198707)
chr4 (183-274)||(13198870-13198961)
chr4 (183-286)||(32703224-32703327)
chr4 (188-274)||(49178779-49178866)
chr4 (183-273)||(18077167-18077257)
chr4 (184-286)||(39086575-39086677)
chr4 (183-300)||(293155-293272)
chr4 (182-283)||(9023242-9023343)
chr4 (183-286)||(169012-169116)
chr4 (182-286)||(39744028-39744132)
chr4 (184-283)||(169394-169493)
chr4 (183-274)||(35393741-35393830)
chr4 (183-286)||(48405961-48406063)
chr4 (183-245)||(24775776-24775838)
chr4 (182-266)||(16555513-16555598)
chr4 (180-284)||(23432472-23432577)
chr4 (182-312)||(47219131-47219257)
chr4 (182-286)||(292780-292884)
chr4 (182-246)||(11241653-11241716)
chr4 (180-286)||(23539837-23539941)
chr4 (183-286)||(26207698-26207801)
chr4 (207-274)||(39415247-39415314)
chr4 (184-274)||(11241389-11241478)
chr4 (184-286)||(23540204-23540306)
chr4 (183-293)||(45828993-45829103)
chr4 (185-274)||(8488447-8488534)
chr4 (185-286)||(43292038-43292139)
chr4 (183-286)||(26207360-26207462)
chr4 (184-279)||(43292316-43292411)
chr4 (189-279)||(49178644-49178735)
chr4 (183-274)||(54508814-54508904)
chr4 (184-274)||(3930179-3930268)
chr4 (185-238)||(8181992-8182046)
chr4 (185-285)||(22681576-22681681)
chr4 (181-274)||(22681845-22681936)
chr4 (185-299)||(23433425-23433538)
chr4 (211-283)||(11530154-11530225)
chr4 (198-286)||(48406337-48406425)
chr4 (182-245)||(5205986-5206049)
chr4 (184-274)||(27304718-27304806)
chr4 (184-246)||(5206222-5206283)
chr4 (183-237)||(25225399-25225453)
chr4 (212-286)||(44468875-44468949)
chr4 (183-286)||(8488187-8488287)
chr4 (184-225)||(49178533-49178574)
chr4 (183-238)||(8182172-8182228)
chr4 (189-236)||(16555695-16555743)
chr4 (202-286)||(25162265-25162349)
chr4 (184-235)||(7603422-7603472)
chr4 (189-238)||(27304893-27304943)
chr4 (189-273)||(5206100-5206185)
chr4 (187-295)||(8181873-8181981)
chr4 (197-285)||(54509070-54509155)
chr4 (249-289)||(24775585-24775625)
[»] chr6 (40 HSPs)
chr6 (178-312)||(33829562-33829696)
chr6 (184-304)||(33828990-33829110)
chr6 (181-286)||(3403940-3404046)
chr6 (183-289)||(21031978-21032084)
chr6 (184-286)||(18242107-18242210)
chr6 (184-286)||(10087810-10087912)
chr6 (182-286)||(30388315-30388418)
chr6 (184-286)||(33974251-33974353)
chr6 (183-274)||(18241853-18241944)
chr6 (184-274)||(11656746-11656836)
chr6 (184-245)||(3403717-3403778)
chr6 (182-274)||(10039674-10039764)
chr6 (183-286)||(7654500-7654603)
chr6 (177-274)||(21032243-21032341)
chr6 (174-289)||(31598221-31598336)
chr6 (187-286)||(32733948-32734047)
chr6 (184-274)||(30388062-30388150)
chr6 (182-275)||(13579615-13579706)
chr6 (191-284)||(21032107-21032203)
chr6 (184-248)||(22684348-22684411)
chr6 (184-248)||(22754657-22754720)
chr6 (174-246)||(31598720-31598791)
chr6 (187-238)||(3825530-3825580)
chr6 (183-274)||(23250591-23250680)
chr6 (183-286)||(29074324-29074426)
chr6 (183-286)||(29079088-29079190)
chr6 (183-286)||(29106897-29106999)
chr6 (185-279)||(22755048-22755142)
chr6 (211-280)||(2762510-2762579)
chr6 (182-286)||(23250843-23250947)
chr6 (183-238)||(33655115-33655169)
chr6 (189-238)||(2762611-2762661)
chr6 (189-238)||(10039843-10039893)
chr6 (184-274)||(33971994-33972082)
chr6 (183-240)||(2354808-2354865)
chr6 (189-234)||(12714436-12714481)
chr6 (189-237)||(33972190-33972239)
chr6 (189-236)||(3403867-3403915)
chr6 (189-273)||(11656608-11656695)
chr6 (189-236)||(30388242-30388290)
[»] chr2 (73 HSPs)
chr2 (179-312)||(2639408-2639541)
chr2 (184-312)||(26842164-26842292)
chr2 (182-304)||(26841585-26841707)
chr2 (183-301)||(2638819-2638937)
chr2 (187-312)||(7591204-7591328)
chr2 (185-304)||(18296077-18296196)
chr2 (181-286)||(30190920-30191026)
chr2 (183-284)||(24832330-24832432)
chr2 (174-275)||(20347427-20347528)
chr2 (183-286)||(6171408-6171511)
chr2 (183-280)||(11883622-11883719)
chr2 (184-300)||(7591788-7591904)
chr2 (178-274)||(32673107-32673202)
chr2 (187-286)||(40469680-40469780)
chr2 (184-274)||(11883890-11883980)
chr2 (187-286)||(8851151-8851250)
chr2 (181-286)||(7664245-7664350)
chr2 (183-246)||(18296685-18296748)
chr2 (187-286)||(26692772-26692871)
chr2 (183-262)||(37720203-37720282)
chr2 (184-286)||(7664625-7664727)
chr2 (184-262)||(16910827-16910905)
chr2 (184-274)||(30191189-30191279)
chr2 (247-312)||(18296648-18296713)
chr2 (181-301)||(5379896-5380016)
chr2 (186-286)||(6325299-6325399)
chr2 (183-279)||(8851541-8851637)
chr2 (184-248)||(17850978-17851042)
chr2 (182-286)||(41790864-41790968)
chr2 (182-301)||(5378659-5378778)
chr2 (184-299)||(38490780-38490894)
chr2 (180-274)||(20347159-20347252)
chr2 (184-274)||(40469427-40469517)
chr2 (186-280)||(15321394-15321486)
chr2 (187-274)||(15920781-15920867)
chr2 (186-289)||(18055050-18055150)
chr2 (184-286)||(26737732-26737835)
chr2 (191-300)||(6324924-6325033)
chr2 (185-286)||(16911221-16911321)
chr2 (183-274)||(6495687-6495776)
chr2 (183-274)||(26737481-26737569)
chr2 (187-286)||(5793450-5793549)
chr2 (183-286)||(17851354-17851457)
chr2 (187-286)||(26692399-26692498)
chr2 (187-280)||(43495441-43495535)
chr2 (184-275)||(43495569-43495658)
chr2 (184-274)||(6171156-6171245)
chr2 (184-274)||(32672842-32672932)
chr2 (182-286)||(7979565-7979667)
chr2 (185-262)||(18750102-18750178)
chr2 (187-286)||(19141801-19141898)
chr2 (187-245)||(18055309-18055367)
chr2 (186-248)||(19141446-19141507)
chr2 (182-236)||(29230280-29230334)
chr2 (183-248)||(7979993-7980057)
chr2 (187-271)||(15321515-15321600)
chr2 (187-275)||(17345736-17345822)
chr2 (247-300)||(31641545-31641598)
chr2 (182-274)||(17345999-17346090)
chr2 (187-273)||(18055169-18055257)
chr2 (184-236)||(40221313-40221364)
chr2 (189-279)||(40221446-40221538)
chr2 (189-236)||(40469607-40469655)
chr2 (183-231)||(43495308-43495356)
chr2 (180-273)||(40221545-40221631)
chr2 (187-286)||(41790494-41790592)
chr2 (189-237)||(26737657-26737706)
chr2 (187-236)||(29343584-29343633)
chr2 (189-237)||(32673020-32673069)
chr2 (185-237)||(6495468-6495519)
chr2 (189-236)||(11883751-11883799)
chr2 (181-221)||(29230562-29230602)
chr2 (181-221)||(29343861-29343901)
[»] chr7 (71 HSPs)
chr7 (184-312)||(44599489-44599617)
chr7 (182-312)||(13863311-13863441)
chr7 (183-304)||(44600069-44600190)
chr7 (183-312)||(13863884-13864011)
chr7 (182-312)||(8643693-8643822)
chr7 (173-300)||(46816249-46816376)
chr7 (182-284)||(9412278-9412381)
chr7 (178-286)||(3687608-3687716)
chr7 (182-286)||(10533032-10533136)
chr7 (178-286)||(37889211-37889319)
chr7 (183-286)||(17156966-17157069)
chr7 (184-286)||(37888833-37888935)
chr7 (183-284)||(37972350-37972451)
chr7 (183-286)||(20419276-20419379)
chr7 (183-286)||(22740155-22740258)
chr7 (182-286)||(20418886-20418990)
chr7 (183-286)||(3205045-3205148)
chr7 (184-286)||(9035244-9035347)
chr7 (183-274)||(9412022-9412113)
chr7 (187-286)||(18863970-18864069)
chr7 (182-286)||(9034865-9034970)
chr7 (183-283)||(13744188-13744287)
chr7 (182-286)||(18864354-18864457)
chr7 (182-286)||(37971958-37972062)
chr7 (183-286)||(29292921-29293024)
chr7 (184-286)||(13741557-13741659)
chr7 (178-266)||(15567246-15567331)
chr7 (184-286)||(36527750-36527852)
chr7 (182-274)||(23686683-23686773)
chr7 (184-286)||(3204669-3204769)
chr7 (182-245)||(13772639-13772702)
chr7 (184-266)||(13772872-13772955)
chr7 (183-250)||(16198965-16199032)
chr7 (184-286)||(29293298-29293400)
chr7 (181-286)||(42418980-42419085)
chr7 (184-274)||(3687353-3687445)
chr7 (187-279)||(22740550-22740641)
chr7 (184-248)||(48359320-48359383)
chr7 (185-275)||(5735253-5735344)
chr7 (187-274)||(27096306-27096392)
chr7 (187-274)||(27181911-27181997)
chr7 (183-286)||(38826865-38826968)
chr7 (184-289)||(23686421-23686525)
chr7 (187-280)||(27096168-27096262)
chr7 (187-280)||(27182041-27182135)
chr7 (187-289)||(38191265-38191367)
chr7 (183-285)||(42418590-42418692)
chr7 (180-245)||(33628653-33628718)
chr7 (182-274)||(6908211-6908302)
chr7 (211-274)||(15567019-15567079)
chr7 (186-274)||(29291808-29291896)
chr7 (182-286)||(48359610-48359713)
chr7 (184-246)||(35079960-35080021)
chr7 (184-247)||(5349724-5349784)
chr7 (185-238)||(8953889-8953941)
chr7 (185-245)||(18925315-18925373)
chr7 (184-280)||(29292001-29292095)
chr7 (183-240)||(30857902-30857959)
chr7 (187-248)||(36527387-36527447)
chr7 (184-236)||(18925062-18925114)
chr7 (184-289)||(27096047-27096149)
chr7 (184-289)||(27182154-27182256)
chr7 (188-238)||(18925229-18925280)
chr7 (218-274)||(5349497-5349550)
chr7 (187-237)||(6908485-6908534)
chr7 (183-224)||(34235737-34235778)
chr7 (188-236)||(38191387-38191435)
chr7 (185-238)||(39983700-39983753)
chr7 (186-266)||(33628397-33628475)
chr7 (186-238)||(34235978-34236030)
chr7 (202-246)||(35080215-35080259)
[»] chr8 (69 HSPs)
chr8 (182-312)||(13026633-13026763)
chr8 (184-312)||(39723974-39724102)
chr8 (183-304)||(9823295-9823416)
chr8 (187-304)||(13027215-13027332)
chr8 (184-312)||(22851390-22851518)
chr8 (180-312)||(13937316-13937447)
chr8 (183-296)||(13936722-13936833)
chr8 (207-312)||(39723425-39723530)
chr8 (184-312)||(3307338-3307466)
chr8 (184-312)||(9822748-9822876)
chr8 (184-286)||(41662354-41662457)
chr8 (183-312)||(6092776-6092902)
chr8 (186-284)||(765736-765835)
chr8 (183-284)||(12281123-12281225)
chr8 (184-286)||(15156136-15156239)
chr8 (184-286)||(43245871-43245974)
chr8 (182-300)||(15042143-15042261)
chr8 (182-274)||(15155881-15155973)
chr8 (182-286)||(37396706-37396810)
chr8 (184-275)||(37752084-37752176)
chr8 (168-286)||(16928926-16929043)
chr8 (183-285)||(41662520-41662622)
chr8 (183-274)||(43246139-43246231)
chr8 (183-286)||(17431286-17431389)
chr8 (184-274)||(12281390-12281480)
chr8 (184-274)||(16929207-16929296)
chr8 (184-286)||(24473343-24473445)
chr8 (184-274)||(37752381-37752470)
chr8 (182-286)||(6199048-6199152)
chr8 (178-286)||(24473720-24473828)
chr8 (182-286)||(34498507-34498611)
chr8 (186-249)||(25438794-25438857)
chr8 (184-286)||(37397097-37397199)
chr8 (184-288)||(3463894-3463999)
chr8 (186-283)||(15442765-15442862)
chr8 (182-286)||(6198656-6198760)
chr8 (183-274)||(18020053-18020141)
chr8 (183-286)||(20861590-20861693)
chr8 (184-274)||(34313765-34313852)
chr8 (187-266)||(34498125-34498204)
chr8 (183-274)||(41662106-41662197)
chr8 (184-246)||(23123338-23123400)
chr8 (207-286)||(74936-75015)
chr8 (224-286)||(37752154-37752217)
chr8 (184-262)||(9623502-9623580)
chr8 (182-248)||(15444637-15444703)
chr8 (186-274)||(74688-74773)
chr8 (181-274)||(33747981-33748073)
chr8 (187-274)||(9465838-9465923)
chr8 (182-241)||(2856524-2856583)
chr8 (189-284)||(18019915-18020013)
chr8 (187-262)||(25439102-25439176)
chr8 (188-238)||(43162539-43162588)
chr8 (247-312)||(22851912-22851976)
chr8 (186-238)||(23123517-23123567)
chr8 (184-274)||(43162234-43162325)
chr8 (191-234)||(7127660-7127702)
chr8 (183-273)||(9465606-9465693)
chr8 (183-266)||(11007800-11007883)
chr8 (185-236)||(22851958-22852009)
chr8 (187-286)||(33727057-33727156)
chr8 (176-274)||(3463634-3463729)
chr8 (184-286)||(16169174-16169275)
chr8 (182-236)||(22786838-22786892)
chr8 (218-274)||(765999-766053)
chr8 (189-274)||(7127789-7127877)
chr8 (189-237)||(15156062-15156111)
chr8 (176-224)||(767720-767767)
chr8 (189-236)||(37752242-37752290)
[»] chr5 (61 HSPs)
chr5 (178-312)||(18817537-18817671)
chr5 (183-312)||(11350807-11350935)
chr5 (182-312)||(18816950-18817080)
chr5 (184-286)||(18433015-18433118)
chr5 (182-312)||(11351355-11351483)
chr5 (182-286)||(25115755-25115860)
chr5 (182-286)||(25174847-25174952)
chr5 (183-286)||(26020449-26020553)
chr5 (182-286)||(12498565-12498669)
chr5 (182-274)||(22428932-22429021)
chr5 (182-286)||(12498880-12498984)
chr5 (182-274)||(25175115-25175207)
chr5 (182-286)||(26571116-26571220)
chr5 (183-274)||(18433281-18433371)
chr5 (183-286)||(19514915-19515018)
chr5 (185-286)||(22729392-22729492)
chr5 (187-286)||(34576870-34576968)
chr5 (187-286)||(21207229-21207328)
chr5 (184-286)||(3888239-3888341)
chr5 (184-274)||(34577129-34577217)
chr5 (182-286)||(26570727-26570831)
chr5 (182-286)||(43464144-43464247)
chr5 (187-286)||(3888614-3888713)
chr5 (184-286)||(19514525-19514628)
chr5 (182-274)||(25116023-25116117)
chr5 (182-263)||(5187805-5187886)
chr5 (187-279)||(2817152-2817244)
chr5 (182-246)||(22429188-22429251)
chr5 (178-262)||(37610196-37610279)
chr5 (178-262)||(37780314-37780397)
chr5 (182-275)||(16466708-16466798)
chr5 (181-248)||(31569904-31569970)
chr5 (183-286)||(34147462-34147565)
chr5 (183-286)||(42919304-42919406)
chr5 (187-286)||(43463759-43463857)
chr5 (184-274)||(9665792-9665879)
chr5 (212-286)||(11316926-11317000)
chr5 (190-236)||(16726084-16726130)
chr5 (171-248)||(10098931-10099007)
chr5 (187-246)||(9665560-9665617)
chr5 (182-238)||(33324838-33324894)
chr5 (183-286)||(34147140-34147241)
chr5 (183-286)||(25940520-25940623)
chr5 (183-238)||(41383167-41383221)
chr5 (184-286)||(22729008-22729108)
chr5 (184-275)||(23011079-23011170)
chr5 (184-262)||(37780718-37780796)
chr5 (179-262)||(10098514-10098597)
chr5 (187-282)||(11316717-11316812)
chr5 (184-230)||(12441320-12441364)
chr5 (185-280)||(25940972-25941067)
chr5 (182-285)||(41072167-41072269)
chr5 (182-237)||(41382891-41382945)
chr5 (187-267)||(9869563-9869639)
chr5 (187-284)||(9869688-9869790)
chr5 (189-237)||(25115885-25115934)
chr5 (189-237)||(25174977-25175026)
chr5 (187-235)||(34576991-34577040)
chr5 (186-262)||(2817551-2817626)
chr5 (189-236)||(18433143-18433191)
chr5 (187-234)||(23011261-23011309)
[»] scaffold0328 (2 HSPs)
scaffold0328 (184-312)||(6721-6849)
scaffold0328 (184-312)||(6152-6279)
[»] chr1 (80 HSPs)
chr1 (178-304)||(49284403-49284529)
chr1 (184-304)||(6002237-6002357)
chr1 (205-312)||(49284981-49285088)
chr1 (183-286)||(47955305-47955409)
chr1 (186-312)||(6002819-6002946)
chr1 (172-286)||(28633708-28633822)
chr1 (174-292)||(31847885-31848003)
chr1 (183-286)||(39691952-39692055)
chr1 (184-286)||(9347126-9347228)
chr1 (184-286)||(48105068-48105170)
chr1 (187-286)||(22149653-22149750)
chr1 (182-286)||(32162995-32163099)
chr1 (183-246)||(8108985-8109048)
chr1 (184-286)||(27172116-27172217)
chr1 (184-286)||(50615573-50615674)
chr1 (184-286)||(50623401-50623502)
chr1 (186-286)||(17518555-17518653)
chr1 (178-286)||(9347503-9347610)
chr1 (182-286)||(26815071-26815175)
chr1 (182-286)||(44911023-44911127)
chr1 (182-274)||(47955572-47955664)
chr1 (186-286)||(50526424-50526524)
chr1 (183-286)||(20480167-20480269)
chr1 (175-286)||(28634109-28634220)
chr1 (184-286)||(41082909-41083011)
chr1 (187-286)||(46823846-46823945)
chr1 (187-286)||(48104681-48104780)
chr1 (187-286)||(50430033-50430132)
chr1 (184-286)||(13918446-13918548)
chr1 (184-286)||(26814694-26814796)
chr1 (184-246)||(48190771-48190833)
chr1 (181-286)||(999477-999581)
chr1 (181-245)||(48191348-48191412)
chr1 (180-274)||(31848158-31848250)
chr1 (187-286)||(42611188-42611287)
chr1 (183-268)||(13589628-13589713)
chr1 (182-292)||(19008696-19008806)
chr1 (187-279)||(1176839-1176932)
chr1 (181-274)||(8108718-8108810)
chr1 (177-274)||(22149396-22149490)
chr1 (178-262)||(6703870-6703954)
chr1 (182-274)||(17518301-17518392)
chr1 (183-283)||(46824233-46824333)
chr1 (184-286)||(20371304-20371406)
chr1 (183-286)||(27172494-27172596)
chr1 (184-286)||(21687025-21687127)
chr1 (184-286)||(49317752-49317853)
chr1 (184-286)||(49318118-49318219)
chr1 (183-248)||(4692423-4692488)
chr1 (182-286)||(6703458-6703562)
chr1 (184-248)||(20480602-20480665)
chr1 (256-312)||(48191311-48191366)
chr1 (185-248)||(13918857-13918920)
chr1 (211-266)||(24671283-24671338)
chr1 (179-238)||(41083211-41083269)
chr1 (247-304)||(48190805-48190862)
chr1 (187-262)||(999115-999189)
chr1 (182-237)||(39690792-39690847)
chr1 (187-286)||(42611566-42611665)
chr1 (183-262)||(50429655-50429734)
chr1 (183-233)||(50615239-50615289)
chr1 (183-233)||(50623067-50623117)
chr1 (177-238)||(1177018-1177079)
chr1 (184-275)||(1176717-1176805)
chr1 (183-262)||(20371039-20371116)
chr1 (184-248)||(21687457-21687520)
chr1 (187-285)||(31848019-31848119)
chr1 (183-286)||(33085670-33085771)
chr1 (182-286)||(44911389-44911493)
chr1 (183-246)||(19007734-19007796)
chr1 (185-279)||(46056904-46056991)
chr1 (185-240)||(47498493-47498547)
chr1 (183-238)||(48313792-48313847)
chr1 (187-236)||(22149580-22149630)
chr1 (189-237)||(8108899-8108948)
chr1 (189-237)||(17518481-17518530)
chr1 (184-248)||(47498301-47498363)
chr1 (181-234)||(50949569-50949622)
chr1 (212-248)||(32162757-32162793)
chr1 (184-248)||(49318433-49318496)
[»] chr3 (69 HSPs)
chr3 (182-312)||(1928360-1928489)
chr3 (184-286)||(20968971-20969073)
chr3 (183-289)||(47871070-47871176)
chr3 (181-286)||(48159894-48159999)
chr3 (184-300)||(8314013-8314129)
chr3 (184-286)||(10293608-10293711)
chr3 (184-274)||(18875155-18875245)
chr3 (184-285)||(10348752-10348853)
chr3 (183-274)||(20968717-20968808)
chr3 (187-286)||(27238852-27238951)
chr3 (183-286)||(40848520-40848622)
chr3 (183-286)||(53687887-53687990)
chr3 (184-274)||(10293873-10293963)
chr3 (184-286)||(42673248-42673349)
chr3 (184-286)||(48160285-48160387)
chr3 (184-285)||(24485413-24485513)
chr3 (181-286)||(40848913-40849018)
chr3 (182-286)||(27238463-27238567)
chr3 (184-299)||(28702278-28702390)
chr3 (184-300)||(42672978-42673093)
chr3 (181-286)||(9026733-9026835)
chr3 (184-274)||(17372298-17372387)
chr3 (184-286)||(47666287-47666389)
chr3 (185-286)||(22429159-22429260)
chr3 (179-246)||(45060863-45060930)
chr3 (184-246)||(1927772-1927834)
chr3 (187-279)||(17372433-17372525)
chr3 (182-246)||(21895655-21895720)
chr3 (184-248)||(3353128-3353191)
chr3 (181-237)||(18874879-18874935)
chr3 (178-262)||(26007176-26007259)
chr3 (182-286)||(26007571-26007675)
chr3 (181-274)||(47870820-47870910)
chr3 (184-274)||(13657445-13657536)
chr3 (184-275)||(21896474-21896564)
chr3 (184-274)||(9026998-9027086)
chr3 (182-312)||(10771502-10771628)
chr3 (184-286)||(53688255-53688356)
chr3 (181-262)||(3353527-3353607)
chr3 (187-279)||(13657580-13657673)
chr3 (182-247)||(42455788-42455853)
chr3 (183-248)||(53766569-53766634)
chr3 (184-240)||(3644781-3644837)
chr3 (188-285)||(4947263-4947362)
chr3 (186-286)||(22429548-22429647)
chr3 (183-286)||(36180555-36180656)
chr3 (182-237)||(1101182-1101237)
chr3 (182-237)||(8315083-8315137)
chr3 (182-245)||(14015957-14016019)
chr3 (191-274)||(26540833-26540915)
chr3 (187-262)||(53766166-53766241)
chr3 (212-286)||(24485049-24485123)
chr3 (182-248)||(36180980-36181046)
chr3 (184-274)||(42627511-42627599)
chr3 (182-236)||(47665909-47665963)
chr3 (256-300)||(1927815-1927858)
chr3 (187-284)||(14015824-14015923)
chr3 (184-232)||(45060596-45060644)
chr3 (186-237)||(1100917-1100968)
chr3 (185-274)||(17372560-17372645)
chr3 (216-262)||(42456171-42456217)
chr3 (184-286)||(44008353-44008454)
chr3 (185-286)||(10348480-10348581)
chr3 (184-225)||(13657735-13657776)
chr3 (189-237)||(20968897-20968946)
chr3 (187-238)||(1101090-1101141)
chr3 (183-235)||(17441066-17441118)
chr3 (189-236)||(18875017-18875065)
chr3 (256-304)||(21895701-21895749)
[»] scaffold0110 (2 HSPs)
scaffold0110 (182-286)||(45758-45862)
scaffold0110 (183-274)||(45536-45626)
[»] scaffold0802 (3 HSPs)
scaffold0802 (184-286)||(1371-1474)
scaffold0802 (184-274)||(1118-1208)
scaffold0802 (189-237)||(1297-1346)
[»] scaffold0192 (2 HSPs)
scaffold0192 (183-280)||(25327-25424)
scaffold0192 (189-236)||(25247-25295)
[»] scaffold0319 (3 HSPs)
scaffold0319 (184-286)||(6648-6750)
scaffold0319 (183-274)||(6393-6485)
scaffold0319 (189-236)||(6575-6623)
[»] scaffold0001 (5 HSPs)
scaffold0001 (184-273)||(438930-439019)
scaffold0001 (182-274)||(439165-439255)
scaffold0001 (183-289)||(183611-183717)
scaffold0001 (187-274)||(183367-183453)
scaffold0001 (187-280)||(183497-183592)
[»] scaffold0535 (1 HSPs)
scaffold0535 (183-310)||(10011-10138)
[»] scaffold0017 (2 HSPs)
scaffold0017 (184-286)||(185226-185328)
scaffold0017 (185-286)||(184840-184941)
[»] scaffold0460 (2 HSPs)
scaffold0460 (183-286)||(329-432)
scaffold0460 (184-262)||(739-816)
[»] scaffold0176 (2 HSPs)
scaffold0176 (177-248)||(20033-20104)
scaffold0176 (173-262)||(19610-19698)
[»] scaffold0041 (2 HSPs)
scaffold0041 (183-286)||(38647-38750)
scaffold0041 (217-286)||(38284-38353)
[»] scaffold0002 (1 HSPs)
scaffold0002 (184-286)||(411923-412024)
[»] scaffold0029 (2 HSPs)
scaffold0029 (183-286)||(9904-10008)
scaffold0029 (182-246)||(10311-10373)
[»] scaffold0015 (2 HSPs)
scaffold0015 (179-274)||(17119-17214)
scaffold0015 (184-286)||(16853-16956)
[»] scaffold0069 (2 HSPs)
scaffold0069 (184-286)||(50458-50560)
scaffold0069 (183-262)||(50074-50151)
[»] scaffold0009 (1 HSPs)
scaffold0009 (178-274)||(205681-205774)
[»] scaffold0376 (2 HSPs)
scaffold0376 (183-240)||(7454-7510)
scaffold0376 (184-238)||(7600-7653)
[»] scaffold1221 (2 HSPs)
scaffold1221 (184-240)||(1511-1566)
scaffold1221 (187-274)||(1747-1834)
[»] scaffold0598 (2 HSPs)
scaffold0598 (185-237)||(6877-6927)
scaffold0598 (181-236)||(6604-6659)
[»] scaffold0035 (2 HSPs)
scaffold0035 (185-289)||(72967-73070)
scaffold0035 (187-274)||(73089-73177)


Alignment Details
Target: chr4 (Bit Score: 247; Significance: 1e-137; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 37 - 312
Target Start/End: Original strand, 56505540 - 56505821
Alignment:
Q  37 cagtcagtgaggtgttctatcatctcattccacacatgttaacagtttaatattaatattttagttgcaatccccttcaaaaag------tgaaatcagt 130  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||      ||||||||||    
T  56505540 cagttagtgaggtgttctatcatctcattccacacatgttaacagtttaatattaatattttagttgtaatccccttcaaaaagtgaaagtgaaatcagt 56505639  T
Q  131 gaacaataagagtggttggttggtgtggttgagcatcatacatatataatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattt 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  56505640 gaacaataagagtggttggttggtgtggttgagcatcatacatatataatataggcttaattgcacttttcccccctatcttttgccaattgtgcgattt 56505739  T
Q  231 tgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctggtttgaaggccccccatgtgttttag 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56505740 tgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctggtttgaaggccccccatgtgttttag 56505821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 180 - 304
Target Start/End: Original strand, 50678775 - 50678899
Alignment:
Q  180 tataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccc 279  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||    
T  50678775 tataggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccc 50678874  T
Q  280 ctttctggtttgaaggccccccatg 304  Q
    ||||||| |||| ||||||||||||    
T  50678875 ctttctgatttggaggccccccatg 50678899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 184 - 312
Target Start/End: Complemental strand, 50679478 - 50679350
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||| |||||||  |||| ||||||||||||||||||||||||||||    
T  50679478 ggcttaattgcacttttcacccctatcttttgccaattgtacgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 50679379  T
Q  284 ctggtttgaaggccccccatgtgttttag 312  Q
    ||| |||| ||||||||||||||||||||    
T  50679378 ctgatttggaggccccccatgtgttttag 50679350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 174 - 312
Target Start/End: Complemental strand, 56506638 - 56506500
Alignment:
Q  174 atataatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttt 273  Q
    ||||| |||||||||||||||||||||| ||| ||||||||||||||||||| |||||| || |||| ||||||||||||| ||||||||||||||| ||    
T  56506638 atatattataggcttaattgcacttttcacccttatcttttgccaattgtgcaattttgtactccatgtttttaattgagcgattttgcaccccatcatt 56506539  T
Q  274 ttccccctttctggtttgaaggccccccatgtgttttag 312  Q
    ||||||||||||| |||||||||||| | ||||||||||    
T  56506538 ttccccctttctgatttgaaggcccctcgtgtgttttag 56506500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 187 - 312
Target Start/End: Complemental strand, 36096526 - 36096401
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||  |||| |||||||||||||||||||| ||||||||||    
T  36096526 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttttcccctttctg 36096427  T
Q  287 gtttgaaggccccccatgtgttttag 312  Q
     |||| ||||||||||||||||||||    
T  36096426 atttggaggccccccatgtgttttag 36096401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 183 - 312
Target Start/End: Complemental strand, 43051307 - 43051178
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||| ||||| ||| |||||||||||||||||| ||||||||||||||| |||||||  |||| ||||||||||||||||||||||| |||    
T  43051307 aggcttaattgcatttttcacccctatcttttgccaattgtgtgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccctctt 43051208  T
Q  283 tctggtttgaaggccccccatgtgttttag 312  Q
    |||| |||| ||||||||||||||||||||    
T  43051207 tctgatttggaggccccccatgtgttttag 43051178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 183 - 312
Target Start/End: Original strand, 36095816 - 36095944
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||| |||||||  |||| ||||||||||| |||||||| ||||||    
T  36095816 aggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccctatcttttt-cccctt 36095914  T
Q  283 tctggtttgaaggccccccatgtgttttag 312  Q
    |||| |||| ||||||||||||| ||||||    
T  36095915 tctgatttggaggccccccatgtattttag 36095944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 187 - 312
Target Start/End: Original strand, 43050610 - 43050735
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    |||||||||||||||  || |||||||| ||||||||||||||||||||||||| |||||||  |||  |||||||||||||||||||||||||||||||    
T  43050610 ttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgtttttaaacgagtgattttgcaccccatctttttccccctttctg 43050709  T
Q  287 gtttgaaggccccccatgtgttttag 312  Q
     |||| |||||| |||||||||||||    
T  43050710 atttggaggccctccatgtgttttag 43050735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 16555871 - 16555768
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccctt 282  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||  |||||| |||||||||||||||||||| |||||||    
T  16555871 ggcttaattgcacttttcccccttatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttttgccccctt 16555772  T
Q  283 tctg 286  Q
    ||||    
T  16555771 tctg 16555768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 182 - 312
Target Start/End: Complemental strand, 45830252 - 45830124
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||| ||||||||| ||| ||||||||| ||||||||||||||| |||||||| |||||||  |||| |||||||||||||||||||| |||||    
T  45830252 taggcttaatcgcacttttcacccctatcttttgtcaattgtgcgattttacaccccatgtttttaaaagagcgattttgcaccccatcttttt-cccct 45830154  T
Q  282 ttctggtttgaaggccccccatgtgttttag 312  Q
    ||||| |||| | ||||||||| ||||||||    
T  45830153 ttctgatttgga-gccccccatatgttttag 45830124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 185 - 312
Target Start/End: Original strand, 11529169 - 11529296
Alignment:
Q  185 gcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttc 284  Q
    |||||||||||||||||| || || ||||||||||||||| ||||||||||||||| |||||||| | || |||||||||| |||| ||||||| ||||     
T  11529169 gcttaattgcacttttcctccctaacttttgccaattgtgtgattttgcaccccatgtttttaatcgtgcgattttgcaccacatcattttccctctttt 11529268  T
Q  285 tggtttgaaggccccccatgtgttttag 312  Q
    | |||||||| |||| ||| ||||||||    
T  11529269 tagtttgaagtcccctcatatgttttag 11529296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 3930535 - 3930431
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccc 280  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |||||  || ||| |||||||||||||||||||| |||||    
T  3930535 taggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcaccccctcttttttttttagcgattttgcaccccatctttttgccccc 3930437  T
Q  281 tttctg 286  Q
    ||||||    
T  3930436 tttctg 3930431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 182 - 286
Target Start/End: Original strand, 28196344 - 28196448
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||||||||    
T  28196344 taggcttaattgcacttttcccccctataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 28196443  T
Q  282 ttctg 286  Q
    |||||    
T  28196444 ttctg 28196448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 179 - 286
Target Start/End: Complemental strand, 4239425 - 4239318
Alignment:
Q  179 atataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccc 278  Q
    |||| ||||||||||||||||| |||| |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| || ||||||||    
T  4239425 atattggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatatttttccc 4239326  T
Q  279 cctttctg 286  Q
    ||||||||    
T  4239325 cctttctg 4239318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 9023735 - 9023632
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||||| |||||| ||||| ||||||| ||| ||  |||||||||||    
T  9023735 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttccccctt 9023636  T
Q  283 tctg 286  Q
    ||||    
T  9023635 tctg 9023632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 28196828 - 28196725
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  |||||||||||    
T  28196828 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 28196729  T
Q  283 tctg 286  Q
    ||||    
T  28196728 tctg 28196725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 181 - 286
Target Start/End: Complemental strand, 9380798 - 9380693
Alignment:
Q  181 ataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccc 280  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||||||||||| ||||| ||||||  |||| ||||||| ||| ||  |||||||||    
T  9380798 ataggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctatagttttccccc 9380699  T
Q  281 tttctg 286  Q
    ||||||    
T  9380698 tttctg 9380693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 185 - 286
Target Start/End: Original strand, 25161879 - 25161980
Alignment:
Q  185 gcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttc 284  Q
    ||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  |||||||||||||    
T  25161879 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 25161978  T
Q  285 tg 286  Q
    ||    
T  25161979 tg 25161980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 39744521 - 39744417
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||||||||    
T  39744521 taggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 39744422  T
Q  282 ttctg 286  Q
    |||||    
T  39744421 ttctg 39744417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 184 - 286
Target Start/End: Original strand, 9380307 - 9380409
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||| ||||||| ||||||  |||| ||||||| ||| ||  ||||||||||||    
T  9380307 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgattttgccccctatagttttcccccttt 9380406  T
Q  284 ctg 286  Q
    |||    
T  9380407 ctg 9380409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 32703704 - 32703602
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  |||||||| |||    
T  32703704 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccctttt 32703605  T
Q  284 ctg 286  Q
    |||    
T  32703604 ctg 32703602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 13198606 - 13198707
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccat-atttttaattgagctattttgcaccccatcttttt-ccccctttc 284  Q
    ||||||||||||||| ||  |||||||||||||||||||||||||||||||| |  |||||  |||||| |||||||||||||||||||| |||||||||    
T  13198606 ttaattgcacttttctcctttatcttttgccaattgtgcgattttgcaccccctcttttttttttgagcgattttgcaccccatctttttgccccctttc 13198705  T
Q  285 tg 286  Q
    ||    
T  13198706 tg 13198707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 183 - 274
Target Start/End: Complemental strand, 13198961 - 13198870
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||||||||||| | ||||   |||||| ||||||||||| |||||||    
T  13198961 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctcttttgttttgagcgattttgcaccctatctttt 13198870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 32703224 - 32703327
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||| |||||||| || ||||||  |||| ||||||| ||| ||  |||||||||||    
T  32703224 aggcttaattgcacttttcccccctataatttgccaattgtgcgattatgcaccccgtagttttaaacgagcgattttgccccctatagttttccccctt 32703323  T
Q  283 tctg 286  Q
    ||||    
T  32703324 tctg 32703327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 188 - 274
Target Start/End: Complemental strand, 49178866 - 49178779
Alignment:
Q  188 taattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaatt-gagctattttgcaccccatctttt 274  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||| | |||||  || |||| |||||||||||||||||||    
T  49178866 taattgcacttttctcccctatcttttgccaattgtgcgattttgcaccccctctttttttttggagcgattttgcaccccatctttt 49178779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 18077257 - 18077167
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttt 273  Q
    ||||||||||||||||||| ||| ||| |||||| ||||||||||||||||||||| | |||||  |||||| |||||||| |||||||||    
T  18077257 aggcttaattgcacttttcacccctattttttgctaattgtgcgattttgcaccccctcttttttgttgagcgattttgcatcccatcttt 18077167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 39086677 - 39086575
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||||||||  ||| ||||||  |||| ||||||| ||| ||  ||||||||||||    
T  39086677 ggcttaattgcacttttctcccatatagtttgccaattgtgcgattttgcacctaatagttttaaacgagcgattttgccccctatagttttcccccttt 39086578  T
Q  284 ctg 286  Q
    |||    
T  39086577 ctg 39086575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 300
Target Start/End: Complemental strand, 293272 - 293155
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    |||||||||||||||||| |||| |||  |||| ||||||||||||||||||||||||| ||||||  |||| ||||||| ||  ||  |||||||||||    
T  293272 aggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccgtatagttttccccctt 293173  T
Q  283 tctggtttgaaggccccc 300  Q
    |||| ||| | |||||||    
T  293172 tctgattttatggccccc 293155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 283
Target Start/End: Original strand, 9023242 - 9023343
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||||||||||| ||| |||  |||||||||||||||||||||||||||||| ||||||  |||  ||||||| ||| ||  ||||||||||    
T  9023242 taggcttaattgcacttttctcccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagtgattttgccccctatagttttccccct 9023341  T
Q  282 tt 283  Q
    ||    
T  9023342 tt 9023343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 169012 - 169116
Alignment:
Q  183 aggcttaattgcacttttc-ccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    ||||||||||||||||||| |||| |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  |||| |||||    
T  169012 aggcttaattgcacttttctccccctatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttgccccctatagtttttcccct 169111  T
Q  282 ttctg 286  Q
    |||||    
T  169112 ttctg 169116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 286
Target Start/End: Original strand, 39744028 - 39744132
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    ||||||||||||||||||| |||| |||  ||| |||||||||||||||| ||||||||| ||||||  |||| ||||||| ||| ||  ||||||||||    
T  39744028 taggcttaattgcactttttccccctatagtttaccaattgtgcgattttccaccccataattttaaacgagcgattttgccccctatagttttccccct 39744127  T
Q  282 ttctg 286  Q
    |||||    
T  39744128 ttctg 39744132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 283
Target Start/End: Complemental strand, 169493 - 169394
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||| ||||||||| |||  |||| ||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||||||||||    
T  169493 ggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 169394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 274
Target Start/End: Complemental strand, 35393830 - 35393741
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||| |||||||||| | ||||| || |||| |||||||||||||||||||    
T  35393830 aggcttaattgcacttttcaccc-tatcttttgctaattgtgcgaatttgcaccccctcttttttat-gagcgattttgcaccccatctttt 35393741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 48405961 - 48406063
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||||||||||||| |||  |||||||||| ||| ||||||||||||||| ||||||  |||| ||||||| ||| ||  |||||||||||    
T  48405961 aggcttaattgcacttttccccc-tatagtttgccaattatgcaattttgcaccccatagttttaaacgagcgattttgccccctataattttccccctt 48406059  T
Q  283 tctg 286  Q
    ||||    
T  48406060 tctg 48406063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 24775838 - 24775776
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttt 245  Q
    ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||| ||||    
T  24775838 aggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttgcaccccatctttt 24775776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 266
Target Start/End: Original strand, 16555513 - 16555598
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccat-atttttaattgagctattttgcaccc 266  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||||||||||||| |  |||||  |||||| |||||||||||    
T  16555513 taggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctcttttttttttgagcgattttgcaccc 16555598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 284
Target Start/End: Original strand, 23432472 - 23432577
Alignment:
Q  180 tataggcttaattgcacttttcccccatatctttt-gccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccc 278  Q
    ||||||||||||||||||||| |||| ||| |||| | ||||||||| ||| |||||||||| ||||||| ||| | |||||||||||  |||||| |||    
T  23432472 tataggcttaattgcacttttgccccctatttttttgtcaattgtgcaattctgcaccccatctttttaaatgaacaattttgcaccctctcttttgccc 23432571  T
Q  279 cctttc 284  Q
    ||||||    
T  23432572 cctttc 23432577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 312
Target Start/End: Complemental strand, 47219257 - 47219131
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||| ||||||||| ||||| ||  |||||||||| |||||||||||||||||||  || |||||||   ||| ||||| |||||||||||||||||       
T  47219257 taggtttaattgcatttttcacctctatcttttgctaattgtgcgattttgcaccttatgtttttaaaccagcgattttacaccccatctttttccc--- 47219161  T
Q  282 ttctggtttgaaggccccccatgtgttttag 312  Q
     |||| |||| |||||| |||||||||||||    
T  47219160 -tctgatttggaggccctccatgtgttttag 47219131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 286
Target Start/End: Original strand, 292780 - 292884
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||||||||||||||| |||  |||||||||||||| |||||||| | |||| ||||||  |||| ||||||| ||| |   ||||||||||    
T  292780 taggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcatctcatagttttaaacgagcgattttgccccctacagttttccccct 292879  T
Q  282 ttctg 286  Q
    |||||    
T  292880 ttctg 292884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 11241716 - 11241653
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatattttt 246  Q
    |||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||| |||||    
T  11241716 taggcttaattgtacttttccccc-tatcttttgccaattgtgggattttgcaccccatcttttt 11241653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 180 - 286
Target Start/End: Original strand, 23539837 - 23539941
Alignment:
Q  180 tataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccc 279  Q
    |||||||||||||||||||| |||| |||   |||||||||||||||||||||||||||||| ||| ||  || | ||||||| ||| || ||||||| |    
T  23539837 tataggcttaattgcactttccccctatag--tttgccaattgtgcgattttgcaccccatagtttaaaacgaacgattttgccccctatatttttcctc 23539934  T
Q  280 ctttctg 286  Q
    |||||||    
T  23539935 ctttctg 23539941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 26207801 - 26207698
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||| ||||||||| |||  |||||||||||||||||||||||||||||  ||| ||  |||| ||||||| ||| ||  |||||| ||||    
T  26207801 aggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctcctt 26207702  T
Q  283 tctg 286  Q
    ||||    
T  26207701 tctg 26207698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 39415247 - 39415314
Alignment:
Q  207 tatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||| ||||||||||||||||||||  | |||||| |||||| |||||||||||||||||||    
T  39415247 tatcttttgctaattgtgcgattttgcaccctctctttttatttgagcgattttgcaccccatctttt 39415314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 274
Target Start/End: Original strand, 11241389 - 11241478
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||||||| || |||||||||  ||||||||||||||||| ||| | |||||  |||||| ||||||||||| |||||||    
T  11241389 ggcttaattgcacttttcctccttatcttttgttaattgtgcgattttgcatcccctcttttt-tttgagcgattttgcaccctatctttt 11241478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 23540306 - 23540204
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||| ||| |||  |||| ||||||||||||||||||||| ||| ||||||  |||| ||||| | ||| ||  ||||||||||||    
T  23540306 ggcttaattgcacttttcacccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttaccccctatagttttcccccttt 23540207  T
Q  284 ctg 286  Q
    |||    
T  23540206 ctg 23540204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 293
Target Start/End: Original strand, 45828993 - 45829103
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||| ||||||| | | |||||||| ||||||||||||||||| |||| || || ||||   ||| |||||||| |||||||||||||| | |    
T  45828993 aggcttaattgtacttttcactcctatcttttaccaattgtgcgattttgtacccaatgttattaaacaagcgattttgcatcccatctttttccctcgt 45829092  T
Q  283 tctggtttgaa 293  Q
    |||| ||||||    
T  45829093 tctgatttgaa 45829103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 185 - 274
Target Start/End: Complemental strand, 8488534 - 8488447
Alignment:
Q  185 gcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||||| ||  |||||||| | ||||||||||||||||||||| | |||||  |||||| |||||||||||||||||||    
T  8488534 gcttaattgcacttttcgcct-tatctttttctaattgtgcgattttgcaccccctcttttt-tttgagcgattttgcaccccatctttt 8488447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 185 - 286
Target Start/End: Original strand, 43292038 - 43292139
Alignment:
Q  185 gcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttc 284  Q
    ||||||||||||||||  ||| |||  |||| ||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  |||| ||||||||    
T  43292038 gcttaattgcacttttttcccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccctttc 43292137  T
Q  285 tg 286  Q
    ||    
T  43292138 tg 43292139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 26207360 - 26207462
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||||||| ||||| |||  |||||||||||||||||||||||||||||  ||| ||  |||| ||||||| ||| ||  |||||| ||||    
T  26207360 aggcttaattgcactttcccccc-tatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctcctt 26207458  T
Q  283 tctg 286  Q
    ||||    
T  26207459 tctg 26207462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 279
Target Start/End: Complemental strand, 43292411 - 43292316
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccc 279  Q
    |||||||||||| ||||||||| | |  ||||||||||||||||||||||| |||||| ||||||  |||| ||||||| ||| ||  ||||||||    
T  43292411 ggcttaattgcatttttcccccctttagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccc 43292316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 279
Target Start/End: Original strand, 49178644 - 49178735
Alignment:
Q  189 aattgcacttttcccccatatctttt-gccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccc 279  Q
    |||||||||||| |||| |||||||| ||||||||||||||||||||||||   | |||  |||||| ||||||||||| ||||||| ||||    
T  49178644 aattgcacttttgccccctatctttttgccaattgtgcgattttgcacccctcttctttttttgagcaattttgcacccaatcttttgcccc 49178735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 54508814 - 54508904
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||||| || |  ||||||||||||||||| ||||||||||||  | |||||  |||||| ||||||||||| |||||||    
T  54508814 aggcttaattgcactttttcctccaatcttttgccaattgtgtgattttgcaccctctcttttt-tttgagcgattttgcaccctatctttt 54508904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 274
Target Start/End: Original strand, 3930179 - 3930268
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||||| |||| ||||||||   |||| |||||||||||||||| | |||||  |||||| ||||||||||| |||||||    
T  3930179 ggcttaattgcactttttcccc-tatcttttattaattatgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 3930268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 8181992 - 8182046
Alignment:
Q  185 gcttaattgcacttttcccccatatc-ttttgccaattgtgcgattttgcacccc 238  Q
    |||||||||||||||| |||| |||| ||||||||||||||||||||||||||||    
T  8181992 gcttaattgcacttttgccccctatcgttttgccaattgtgcgattttgcacccc 8182046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 22681576 - 22681681
Alignment:
Q  185 gcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccat---atttttaa---ttgagctattttgcaccccatctttttccc 278  Q
    ||||||||||||||| ||||| ||||||||| |||||||||||||||||||||| |    |||||||   || ||  |||||||||||||||||||| ||    
T  22681576 gcttaattgcactttcccccc-tatcttttgtcaattgtgcgattttgcaccccctctgttttttaattttttagtgattttgcaccccatctttttgcc 22681674  T
Q  279 cctttct 285  Q
    |||||||    
T  22681675 cctttct 22681681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 274
Target Start/End: Complemental strand, 22681936 - 22681845
Alignment:
Q  181 ataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||||||||||| | |||||||||  |||||||| ||||||||||   |||||||  |||||| ||||||||||  |||||||    
T  22681936 ataggcttaattgcacttttccctcctatcttttgttaattgtgcaattttgcaccatttattttt--ttgagcaattttgcaccatatctttt 22681845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 299
Target Start/End: Complemental strand, 23433538 - 23433425
Alignment:
Q  185 gcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttc 284  Q
    |||||||||||||| | || | ||||||||| ||||||||||||| |||| ||  | ||||||| ||||| |||||||||||  | ||||| ||||||||    
T  23433538 gcttaattgcacttctgcctcttatcttttgtcaattgtgcgattgtgcatcctttctttttaagtgagcgattttgcaccctct-tttttgcccctttc 23433440  T
Q  285 tggtttgaaggcccc 299  Q
    || ||||| ||||||    
T  23433439 tgatttgatggcccc 23433425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 11530225 - 11530154
Alignment:
Q  211 ttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||| ||||||||||||||||| |||| ||||||||||| | || ||||||||||| ||| ||||||||||||    
T  11530225 ttttaccaattgtgcgattttgaaccc-atatttttaatcgtgcgattttgcacccaatccttttcccccttt 11530154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 198 - 286
Target Start/End: Complemental strand, 48406425 - 48406337
Alignment:
Q  198 tttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    |||||||| |||  |||||||||||||||||||||||||| ||| ||||||  |||| ||||||| ||| ||  |||| ||||||||||    
T  48406425 tttcccccctataatttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagtttttcccctttctg 48406337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 5205986 - 5206049
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttt 245  Q
    ||||||||||||||||||||| || |||||||||  ||||  ||||||||||||||||| ||||    
T  5205986 taggcttaattgcacttttcctccctatcttttgttaatttggcgattttgcaccccatctttt 5206049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 274
Target Start/End: Original strand, 27304718 - 27304806
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||| |||||||||  |||||| ||| ||||||||||||||||||||| | ||||   |||||| |||||||| ||||| ||||    
T  27304718 ggcttaattgcccttttcccc--tatcttctgctaattgtgcgattttgcaccccctcttttcttttgagcgattttgcaacccatatttt 27304806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 5206283 - 5206222
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatattttt 246  Q
    |||||||||||||||||||||| ||||||||   |||||||||||||||||||| || |||||    
T  5206283 ggcttaattgcacttttcccccttatctttt-ttaattgtgcgattttgcaccctatcttttt 5206222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 237
Target Start/End: Complemental strand, 25225453 - 25225399
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccc 237  Q
    |||||||||||||||| |  | | |||||||||||||||||||||||||||||||    
T  25225453 aggcttaattgcacttctgtctcctatcttttgccaattgtgcgattttgcaccc 25225399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 286
Target Start/End: Complemental strand, 44468949 - 44468875
Alignment:
Q  212 tttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    ||||||||||||||||||||||||| |||| ||||||  |||| ||||||| ||| ||  |||||| ||||||||    
T  44468949 tttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcctcctttctg 44468875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 8488187 - 8488287
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||| ||||   ||||||||||||  |||||||||||||||||||||   |||||  || | | |||||||| ||||| ||||| ||||||    
T  8488187 aggcttaattgcattttttttccatatcttttgttaattgtgcgattttgcacccc---ttttttttttaacgattttgcagcccattttttttcccctt 8488283  T
Q  283 tctg 286  Q
    ||||    
T  8488284 tctg 8488287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 49178533 - 49178574
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgc 225  Q
    |||||||||||||||||| |||||||||||||| ||||||||    
T  49178533 ggcttaattgcacttttctcccatatcttttgctaattgtgc 49178574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 8182228 - 8182172
Alignment:
Q  183 aggcttaattgcacttttcccccatatctttt-gccaattgtgcgattttgcacccc 238  Q
    ||||||||||||||||||| ||| ||| |||| || |||||||||||||||||||||    
T  8182228 aggcttaattgcacttttcacccctatttttttgctaattgtgcgattttgcacccc 8182172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 16555743 - 16555695
Alignment:
Q  189 aattgcacttttcccccatatctttt-gccaattgtgcgattttgcacc 236  Q
    ||||||||||||||||| |||||||| || |||||||||||||||||||    
T  16555743 aattgcacttttcccccttatctttttgctaattgtgcgattttgcacc 16555695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 286
Target Start/End: Complemental strand, 25162349 - 25162265
Alignment:
Q  202 ccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    |||| ||| ||||| |||||||| |||||||||| ||||| ||||||  |||| ||||||| ||| ||  |||||||||||||||    
T  25162349 ccccctatattttgtcaattgtgtgattttgcactccatagttttaaacgagcgattttgccccctatagttttccccctttctg 25162265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 7603472 - 7603422
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcac 235  Q
    ||||||||||||||||| |||| ||||||||  |||||||||||||||||||    
T  7603472 ggcttaattgcactttttcccc-tatctttttacaattgtgcgattttgcac 7603422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 27304943 - 27304893
Alignment:
Q  189 aattgcacttttcccccatatctttt-gccaattgtgcgattttgcacccc 238  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||||    
T  27304943 aattgcactttttccccctatctttttgctaattgtgcgattttgcacccc 27304893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 273
Target Start/End: Complemental strand, 5206185 - 5206100
Alignment:
Q  189 aattgcacttttcccccatatctttt-gccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttt 273  Q
    |||||||||| | |||| |||||||| || |||||||||||||||||| || | |||||   ||||| ||||||||||| ||||||    
T  5206185 aattgcacttcttccccctatctttttgctaattgtgcgattttgcactccctctttttttctgagcgattttgcaccctatcttt 5206100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 295
Target Start/End: Original strand, 8181873 - 8181981
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccctttct 285  Q
    ||||||| |||||||| || ||  |||||| |||||||| ||||||| |||| | |||||  |||| | |||||||||||||| ||||| |||||||| |    
T  8181873 ttaattgtacttttcctccctaaattttgctaattgtgcaattttgctccccctctttttt-ttgaccgattttgcaccccatttttttgcccccttttt 8181971  T
Q  286 ggtttgaagg 295  Q
    |||| |||||    
T  8181972 ggttagaagg 8181981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 285
Target Start/End: Complemental strand, 54509155 - 54509070
Alignment:
Q  197 ttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttct 285  Q
    ||||||||| ||| |||||| ||||||||||||||||||||  | |||||  |||||| ||||||||| |||  |||| ||||||||||    
T  54509155 ttttccccc-tattttttgctaattgtgcgattttgcaccc--tctttttttttgagcgattttgcactccaaattttgccccctttct 54509070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 24775585 - 24775625
Alignment:
Q  249 ttgagctattttgcaccccatctttttccccctttctggtt 289  Q
    |||||| |||||||||||||||||||  |||||||||||||    
T  24775585 ttgagcaattttgcaccccatcttttatcccctttctggtt 24775625  T

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Target: chr6 (Bit Score: 103; Significance: 3e-51; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 178 - 312
Target Start/End: Complemental strand, 33829696 - 33829562
Alignment:
Q  178 aatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcc 277  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||  |||| ||||||||||||||||||||||    
T  33829696 aatataggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcc 33829597  T
Q  278 ccctttctggtttgaaggccccccatgtgttttag 312  Q
    ||||||||| |||| ||||||||||||||||||||    
T  33829596 ccctttctgatttggaggccccccatgtgttttag 33829562  T

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Target: chr6; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 33828990 - 33829110
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||||||    
T  33828990 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 33829089  T
Q  284 ctggtttgaaggccccccatg 304  Q
    ||| |||| ||||||||||||    
T  33829090 ctgatttggaggccccccatg 33829110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 181 - 286
Target Start/End: Complemental strand, 3404046 - 3403940
Alignment:
Q  181 ataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-cccc 279  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |||||  |||||| |||||||||||||||||||| ||||    
T  3404046 ataggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgcccc 3403947  T
Q  280 ctttctg 286  Q
    |||||||    
T  3403946 ctttctg 3403940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 183 - 289
Target Start/End: Original strand, 21031978 - 21032084
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccct 281  Q
    ||||||||||||||||||||||| || ||||||| ||||||||||||||||||||| | |||||  |||||| |||||||||||||||||||| ||||||    
T  21031978 aggcttaattgcacttttccccc-taacttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccct 21032076  T
Q  282 ttctggtt 289  Q
    ||||||||    
T  21032077 ttctggtt 21032084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 18242210 - 18242107
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccctt 282  Q
    |||||||||||| ||||   || |||||||||||||||||||||||||||||||| | |||||  |||||| |||||||||||||||||||| |||||||    
T  18242210 ggcttaattgcattttttttccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctt 18242111  T
Q  283 tctg 286  Q
    ||||    
T  18242110 tctg 18242107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 10087912 - 10087810
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||||||| | |  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||||||||||    
T  10087912 ggcttaattgcacttttcccccctttagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 10087813  T
Q  284 ctg 286  Q
    |||    
T  10087812 ctg 10087810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 30388418 - 30388315
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccc 280  Q
    |||| ||||||| |||||| |||| |||||||||| ||||||||||||||||||||| | |||||  |||||| |||||||||||||||||||| |||||    
T  30388418 taggtttaattgtactttttccccctatcttttgctaattgtgcgattttgcacccccttttttt--ttgagcgattttgcaccccatctttttaccccc 30388321  T
Q  281 tttctg 286  Q
    ||||||    
T  30388320 tttctg 30388315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 33974353 - 33974251
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||| ||||||||| |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||||||||||    
T  33974353 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 33974254  T
Q  284 ctg 286  Q
    |||    
T  33974253 ctg 33974251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 18241853 - 18241944
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||||||||||| | ||||   |||||| ||||||||||| |||||||    
T  18241853 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctcttttgttttgagcgattttgcaccctatctttt 18241944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 274
Target Start/End: Complemental strand, 11656836 - 11656746
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||||| | | |||||||||| ||||||||||||||||||||| | ||| |  |||||| |||||||||||||||||||    
T  11656836 ggcttaattgcacttttctctcctatcttttgctaattgtgcgattttgcaccccctctttatttttgagcgattttgcaccccatctttt 11656746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 3403717 - 3403778
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttt 245  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||    
T  3403717 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccatctttt 3403778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 10039674 - 10039764
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |||||   ||||| ||||| |||||||||||||    
T  10039674 taggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc-tctttttttatgagcgattttacaccccatctttt 10039764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 7654603 - 7654500
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||||| ||||||  |||  | ||||| ||| ||  |||||||||||    
T  7654603 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagtgactttgccccctatagttttccccctt 7654504  T
Q  283 tctg 286  Q
    ||||    
T  7654503 tctg 7654500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 177 - 274
Target Start/End: Complemental strand, 21032341 - 21032243
Alignment:
Q  177 taatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcacc-ccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||| |||||||||||||||||||||||| |||||||||  |||||||||||||||| || ||   |||||  |||||| |||||||||||||||||||    
T  21032341 taatctaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcgcctcctcttttttctttgagcgattttgcaccccatctttt 21032243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 289
Target Start/End: Complemental strand, 31598336 - 31598221
Alignment:
Q  174 atataatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttt 273  Q
    |||||||  ||||||||||| | ||||||| | |||||||||| ||||||||||||||||||||    |||||  |||||| ||||||||||||||||||    
T  31598336 atataattaaggcttaattgtatttttccctc-tatcttttgctaattgtgcgattttgcacccttcttttttttttgagcaattttgcaccccatcttt 31598238  T
Q  274 tt-ccccctttctggtt 289  Q
    || |||||||| |||||    
T  31598237 ttgccccctttttggtt 31598221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 187 - 286
Target Start/End: Complemental strand, 32734047 - 32733948
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    |||||||||||||||| || |||  ||||||||||||||||||||||| |||||| ||||||  |||| ||||||| ||| ||  ||||| |||||||||    
T  32734047 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctataattttctccctttctg 32733948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 274
Target Start/End: Original strand, 30388062 - 30388150
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||||||||| ||  | |||||  |||||| |||||||||||||||||||    
T  30388062 ggcttaattgcactttcccccc-tatcttttgctaattgtgcgattttgcagcctctcttttt-tttgagcgattttgcaccccatctttt 30388150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 13579706 - 13579615
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt 275  Q
    |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||| |  ||||  || ||| |||||||||||||| |||||    
T  13579706 taggcttaattgcacttttctccc-tatcgtttgctaattgtgcgattttgcaccccctcgtttt-ttttagcgattttgcaccccattttttt 13579615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 284
Target Start/End: Original strand, 21032107 - 21032203
Alignment:
Q  191 ttgcacttttcccccatatctt-ttgccaattgtgcgattttgcaccccatatt--tttaattgagctattttgcaccccatctttttccccctttc 284  Q
    |||||||||| |||| |||||| ||| |||||||||||||||||||||| | ||  |||  |||||| ||||| ||||||||||||| |||||||||    
T  21032107 ttgcacttttgccccctatcttcttgtcaattgtgcgattttgcaccccctcttcttttttttgagcgatttttcaccccatcttttaccccctttc 21032203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 22684411 - 22684348
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaa 248  Q
    |||||||||||||||||||||  |||  ||||||||||||| |||||||||||||||| ||||||    
T  22684411 ggcttaattgcacttttcccct-tatagtttgccaattgtgtgattttgcaccccatagttttaa 22684348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 22754657 - 22754720
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaa 248  Q
    |||||||||||||||||||||  |||  ||||||||||||| |||||||||||||||| ||||||    
T  22754657 ggcttaattgcacttttcccct-tatagtttgccaattgtgtgattttgcaccccatagttttaa 22754720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 31598791 - 31598720
Alignment:
Q  174 atataatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatattttt 246  Q
    |||||||  ||| ||||||||||||||||||| |||||||||  ||||||||||||||||| ||||| |||||    
T  31598791 atataattaaggtttaattgcacttttccccc-tatcttttgttaattgtgcgattttgcatcccatcttttt 31598720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 3825530 - 3825580
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcacccc 238  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||||||||||    
T  3825530 ttaattgcacttttccccc-tatattttgctaattgtgcgattttgcacccc 3825580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 23250591 - 23250680
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||||| |||| ||||||||| |||||||| ||| ||||||||| | |||||  |||||| ||||||| ||| |||||||    
T  23250591 aggcttaattgcactttttcccc-tatcttttgtcaattgtgagatcttgcaccccctcttttt-tttgagcgattttgcgccctatctttt 23250680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 29074426 - 29074324
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    |||||||||||| |||| ||||| |||  |||||||||||||||||||||||||||||| ||| ||  |||| ||||| | ||| ||  ||||| |||||    
T  29074426 aggcttaattgctctttcccccc-tatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctatagttttcgccctt 29074328  T
Q  283 tctg 286  Q
    ||||    
T  29074327 tctg 29074324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 29079190 - 29079088
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    |||||||||||| |||| ||||| |||  |||||||||||||||||||||||||||||| ||| ||  |||| ||||| | ||| ||  ||||| |||||    
T  29079190 aggcttaattgctctttcccccc-tatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctatagttttcgccctt 29079092  T
Q  283 tctg 286  Q
    ||||    
T  29079091 tctg 29079088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 29106999 - 29106897
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    |||||||||||| |||| ||||| |||  |||||||||||||||||||||||||||||| ||| ||  |||| ||||| | ||| ||  ||||| |||||    
T  29106999 aggcttaattgctctttcccccc-tatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctatagttttcgccctt 29106901  T
Q  283 tctg 286  Q
    ||||    
T  29106900 tctg 29106897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 279
Target Start/End: Complemental strand, 22755142 - 22755048
Alignment:
Q  185 gcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccc 279  Q
    ||||||||||||||||||||  |||  |||| ||||| |||||||||||||| |||| ||||||  |||| ||||||| ||| ||  ||||||||    
T  22755142 gcttaattgcacttttcccctttatagtttgtcaattatgcgattttgcaccacatagttttaaacgagcgattttgccccctatagttttcccc 22755048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 2762510 - 2762579
Alignment:
Q  211 ttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccc 280  Q
    |||||| ||||||||||||||||||||| | |||||  |||||  |||||||||| ||||||||| ||||    
T  2762510 ttttgctaattgtgcgattttgcaccccctctttttttttgagtgattttgcacctcatctttttgcccc 2762579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 23250947 - 23250843
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattg-agctattttgcaccccatctttttccccc 280  Q
    ||||||| |||||||||||  ||| |||||||||| |||||||||| |||| ||||| | |||||  ||  ||| |||||| |||||||||||| |||||    
T  23250947 taggcttgattgcactttttgccc-tatcttttgctaattgtgcgaatttgtaccccctctttttttttttagcgattttgtaccccatcttttgccccc 23250849  T
Q  281 tttctg 286  Q
    ||||||    
T  23250848 tttctg 23250843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 33655169 - 33655115
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcacccc 238  Q
    |||||||||||||||| |||||  |||||||||| |||||||| ||||||||||||    
T  33655169 aggcttaattgcacttgtcccct-tatcttttgctaattgtgcaattttgcacccc 33655115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 2762611 - 2762661
Alignment:
Q  189 aattgcacttttcccccatatctttt-gccaattgtgcgattttgcacccc 238  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||||    
T  2762611 aattgcacttttgccccctatctttttgctaattgtgcgattttgcacccc 2762661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 10039893 - 10039843
Alignment:
Q  189 aattgcacttttcccccatatctttt-gccaattgtgcgattttgcacccc 238  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||||    
T  10039893 aattgcacttttgccccctatctttttgctaattgtgcgattttgcacccc 10039843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 274
Target Start/End: Original strand, 33971994 - 33972082
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||| |||| |||| |||||||||  |||||| |||||||||||||| | || ||  |||||| ||||||||||| |||||||    
T  33971994 ggcttaattgcagtttttcccc-tatcttttgttaattgtacgattttgcaccccctcttatt-tttgagcgattttgcaccctatctttt 33972082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 2354865 - 2354808
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccat 240  Q
    ||||||||||||| |||||||   |||  |||| ||||||||||||||||||||||||    
T  2354865 aggcttaattgcatttttcccgtctatagtttgtcaattgtgcgattttgcaccccat 2354808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 12714436 - 12714481
Alignment:
Q  189 aattgcacttttcccccatatcttttgccaattgtgcgattttgca 234  Q
    |||||||||||| |||| |||||||||  |||||||||||||||||    
T  12714436 aattgcacttttgccccctatcttttgttaattgtgcgattttgca 12714481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 33972239 - 33972190
Alignment:
Q  189 aattgcacttttcccccatatc-ttttgccaattgtgcgattttgcaccc 237  Q
    |||||||||||| ||||||||| |||||| ||||||| ||||||||||||    
T  33972239 aattgcacttttgccccatatctttttgctaattgtgagattttgcaccc 33972190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 3403915 - 3403867
Alignment:
Q  189 aattgcacttttcccccatatctttt-gccaattgtgcgattttgcacc 236  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  3403915 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 3403867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 273
Target Start/End: Original strand, 11656608 - 11656695
Alignment:
Q  189 aattgcacttttcccccatatc-ttttgccaattgtgcgattttgcaccccatat--ttttaattgagctattttgcaccccatcttt 273  Q
    |||||||||||| |||| |||| |||||  ||||||||||||||||||||| |||  ||||  |||||  ||||||||||| ||||||    
T  11656608 aattgcacttttgccccctatcgttttgataattgtgcgattttgcaccccctattcttttttttgagtgattttgcaccctatcttt 11656695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 30388290 - 30388242
Alignment:
Q  189 aattgcacttttcccccatatctttt-gccaattgtgcgattttgcacc 236  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  30388290 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 30388242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 1e-50; HSPs: 73)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 179 - 312
Target Start/End: Complemental strand, 2639541 - 2639408
Alignment:
Q  179 atataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccc 278  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||  |||| |||||||||||||||||||||||    
T  2639541 atataggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccc 2639442  T
Q  279 cctttctggtttgaaggccccccatgtgttttag 312  Q
    |||||||| |||| ||||||||||||||||||||    
T  2639441 cctttctgatttggaggccccccatgtgttttag 2639408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 184 - 312
Target Start/End: Complemental strand, 26842292 - 26842164
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    ||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||||||    
T  26842292 ggcttaagtgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 26842193  T
Q  284 ctggtttgaaggccccccatgtgttttag 312  Q
    ||| |||| ||||||||||||||||||||    
T  26842192 ctgatttggaggccccccatgtgttttag 26842164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 182 - 304
Target Start/End: Original strand, 26841585 - 26841707
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||||    
T  26841585 taggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 26841684  T
Q  282 ttctggtttgaaggccccccatg 304  Q
    ||||| |||| ||||||||||||    
T  26841685 ttctgatttggaggccccccatg 26841707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 183 - 301
Target Start/End: Original strand, 2638819 - 2638937
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  2638819 aggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctt 2638918  T
Q  283 tctggtttgaaggcccccc 301  Q
    |||| |||| |||||||||    
T  2638919 tctgatttggaggcccccc 2638937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 187 - 312
Target Start/End: Original strand, 7591204 - 7591328
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    ||||||| ||||||| ||| |||||||||||||||||||||||||||||||||| |||||||  |||| |||||||||||||||||||||||||||||||    
T  7591204 ttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 7591303  T
Q  287 gtttgaaggccccccatgtgttttag 312  Q
     |||| ||| ||||||||||||||||    
T  7591304 atttggagg-cccccatgtgttttag 7591328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 185 - 304
Target Start/End: Original strand, 18296077 - 18296196
Alignment:
Q  185 gcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttc 284  Q
    ||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||| |||||||  |||| |||||||||||||||||||||||| ||||    
T  18296077 gcttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccttttc 18296176  T
Q  285 tggtttgaaggccccccatg 304  Q
    || |||| ||||||||||||    
T  18296177 tgatttggaggccccccatg 18296196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 181 - 286
Target Start/End: Original strand, 30190920 - 30191026
Alignment:
Q  181 ataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-cccc 279  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||  |||||| |||||||||||||||||||| ||||    
T  30190920 ataggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgcccc 30191019  T
Q  280 ctttctg 286  Q
    |||||||    
T  30191020 ctttctg 30191026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 183 - 284
Target Start/End: Original strand, 24832330 - 24832432
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccct 281  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||  |||||| |||||||||||||||||||| ||||||    
T  24832330 aggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttttgccccct 24832429  T
Q  282 ttc 284  Q
    |||    
T  24832430 ttc 24832432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 174 - 275
Target Start/End: Complemental strand, 20347528 - 20347427
Alignment:
Q  174 atataatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttt 273  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||  |||||  ||||||||||||||||||    
T  20347528 atataataaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagggattttgcaccccatcttt 20347429  T
Q  274 tt 275  Q
    ||    
T  20347428 tt 20347427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 6171511 - 6171408
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccct 281  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| | |||||  |||||| |||||||||||||||||||| ||||||    
T  6171511 aggcttaattgcacttttcccccctatcttttgccaattgtgggattttgcacccc-tctttttttttgagcaattttgcaccccatctttttgccccct 6171413  T
Q  282 ttctg 286  Q
    |||||    
T  6171412 ttctg 6171408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 183 - 280
Target Start/End: Original strand, 11883622 - 11883719
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccc 280  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |||||  |||||| |||||||||| ||||||||| ||||    
T  11883622 aggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcaattttgcacctcatctttttgcccc 11883719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 184 - 300
Target Start/End: Complemental strand, 7591904 - 7591788
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    ||||||||||||  |||| | | ||||||||| |||||||||||||||||||||||| |||||||  |||| |||||||||| ||| |||||||||||||    
T  7591904 ggcttaattgcatctttcactcctatcttttgtcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacctcatttttttcccccttt 7591805  T
Q  284 ctggtttgaaggccccc 300  Q
    ||| |||| ||||||||    
T  7591804 ctgatttggaggccccc 7591788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 178 - 274
Target Start/End: Complemental strand, 32673202 - 32673107
Alignment:
Q  178 aatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||| ||| |||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||  |||||| |||||||||||||||||||    
T  32673202 aataaaggtttaattgcactttttcccc-tatcttttgccaattgtgcgattttgcaccccctatttttttttgagcgattttgcaccccatctttt 32673107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 286
Target Start/End: Complemental strand, 40469780 - 40469680
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccctttct 285  Q
    |||||||||||||| |||| |||||||||| ||||||||||||||||||||| | |||||  |||||| |||||||||||||||||||| ||||||||||    
T  40469780 ttaattgcactttttccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctttct 40469681  T
Q  286 g 286  Q
    |    
T  40469680 g 40469680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 184 - 274
Target Start/End: Complemental strand, 11883980 - 11883890
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |||||  |||||| ||||||||| |||||||||    
T  11883980 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcactccatctttt 11883890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 8851151 - 8851250
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  |||||||||||||||    
T  8851151 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 8851250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 181 - 286
Target Start/End: Original strand, 7664245 - 7664350
Alignment:
Q  181 ataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccc 280  Q
    ||||||||||||||||||||||||| |||  |||  ||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  |||||||||    
T  7664245 ataggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctataattttccccc 7664344  T
Q  281 tttctg 286  Q
    ||||||    
T  7664345 tttctg 7664350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 18296748 - 18296685
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatattttt 246  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||    
T  18296748 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatcttttt 18296685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 187 - 286
Target Start/End: Complemental strand, 26692871 - 26692772
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    ||||||||||||||||||  |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  |||||||||||||||    
T  26692871 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 26692772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 37720203 - 37720282
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgc 262  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||  |||| |||||||    
T  37720203 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 37720282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 7664727 - 7664625
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    ||||||||||||||||||| || |||  |||| ||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||||||||||    
T  7664727 ggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 7664628  T
Q  284 ctg 286  Q
    |||    
T  7664627 ctg 7664625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 16910827 - 16910905
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgc 262  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||||||||||||| ||||||  |||| |||||||    
T  16910827 ggcttaattgcacttttcccccatgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 16910905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 274
Target Start/End: Complemental strand, 30191279 - 30191189
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||||||||| ||||||||   ||||||||||||||||||||| | |||||  |||||| ||||||||||| |||||||    
T  30191279 ggcttaattgcacttttcccccctatcttttattaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 30191189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 247 - 312
Target Start/End: Complemental strand, 18296713 - 18296648
Alignment:
Q  247 aattgagctattttgcaccccatctttttccccctttctggtttgaaggccccccatgtgttttag 312  Q
    ||||| || ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  18296713 aattgtgcgattttgcaccccatctttttccccctttctgatttggaggccccccatgtgttttag 18296648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 181 - 301
Target Start/End: Complemental strand, 5380016 - 5379896
Alignment:
Q  181 ataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccc 280  Q
    ||||||||||||||||||||||||| |||  ||| ||||||||||||||||||||||| || ||| ||  | || ||||||| ||| || |||| |||||    
T  5380016 ataggcttaattgcacttttcccccctatagtttaccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctatattttaccccc 5379917  T
Q  281 tttctggtttgaaggcccccc 301  Q
    |||||| ||||| || |||||    
T  5379916 tttctgatttgatggtccccc 5379896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 186 - 286
Target Start/End: Complemental strand, 6325399 - 6325299
Alignment:
Q  186 cttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttct 285  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||| |||| | ||||  |||| ||||||| ||| ||  |||||||| |||||    
T  6325399 cttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagtattaaacgagcgattttgccccctatagttttccccatttct 6325300  T
Q  286 g 286  Q
    |    
T  6325299 g 6325299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 279
Target Start/End: Complemental strand, 8851637 - 8851541
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccc 279  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||||||    
T  8851637 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccc 8851541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 17850978 - 17851042
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaa 248  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||    
T  17850978 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaa 17851042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 41790968 - 41790864
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||  ||| ||  |||| ||||||| ||| ||  ||||||| ||    
T  41790968 taggcttaattgcacttttcccccctatattttgccaattgtgcgattttgccccccattgtttaaaacgagcgattttgccccctatagttttccctct 41790869  T
Q  282 ttctg 286  Q
    |||||    
T  41790868 ttctg 41790864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 5378659 - 5378778
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||||||||||||||| |||  ||||||||||||||||||||||||||| || ||| ||  | || ||||||| ||| || |||| ||| ||    
T  5378659 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctatattttaccctct 5378758  T
Q  282 ttctggtttgaaggcccccc 301  Q
    ||||| ||||| || |||||    
T  5378759 ttctgatttgatggtccccc 5378778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 299
Target Start/End: Complemental strand, 38490894 - 38490780
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||| | ||| |||  ||| ||||||||||||||||||| | |||  ||||||  |||| ||||||||||||||||||||||||||||    
T  38490894 ggcttaattgcactttcctccc-tatagtttaccaattgtgcgattttgcatctcatggttttaaacgagcgattttgcaccccatctttttcccccttt 38490796  T
Q  284 ctggtttgaaggcccc 299  Q
     || ||| ||||||||    
T  38490795 atgatttcaaggcccc 38490780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 180 - 274
Target Start/End: Original strand, 20347159 - 20347252
Alignment:
Q  180 tataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||| |||||||||||  |||||||||  ||||||||||||||||||||| | |||||  |||||| ||||||||||| |||||||    
T  20347159 tataggcttaattacacttttcccctctatcttttgttaattgtgcgattttgcacccc-tctttttttttgagcgattttgcaccctatctttt 20347252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 184 - 274
Target Start/End: Original strand, 40469427 - 40469517
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||| | ||||||| | |||||||||| ||||||||||||||||||||| | |||||  |||||| ||||||||||| |||||||    
T  40469427 ggcttaattgtatttttccctcctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 40469517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 186 - 280
Target Start/End: Original strand, 15321394 - 15321486
Alignment:
Q  186 cttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccc 280  Q
    |||||||||||||||||||  |||||||||  |||||||| |||||||| ||| ||||||   |||||| |||||||||||||||||||| ||||    
T  15321394 cttaattgcacttttcccc--tatcttttgttaattgtgcaattttgcatcccctattttattttgagcgattttgcaccccatctttttgcccc 15321486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 15920781 - 15920867
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||| |||||||||| | |||||||||  ||||||||||||||||||||| | |||||  |||||| |||||||||||||||||||    
T  15920781 ttaatttcacttttccctcctatcttttgttaattgtgcgattttgcaccccctcttttt-tttgagcaattttgcaccccatctttt 15920867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 186 - 289
Target Start/End: Original strand, 18055050 - 18055150
Alignment:
Q  186 cttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttct 285  Q
    |||||||||||||||||||| || ||||||| ||||||||||||||||||||| | |||||  || ||| |||||||||||||| ||||  |||||||||    
T  18055050 cttaattgcacttttccccc-ta-cttttgctaattgtgcgattttgcaccccctcttttt-ttttagcgattttgcaccccattttttgtcccctttct 18055146  T
Q  286 ggtt 289  Q
    ||||    
T  18055147 ggtt 18055150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 26737835 - 26737732
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccat-ctttttccccctt 282  Q
    |||||||||||||||||| ||| |||||||||| || ||||||||||||||||||   |||||  |||||  ||||| |||||||| ||||| |||||||    
T  26737835 ggcttaattgcacttttcacccctatcttttgctaactgtgcgattttgcacccctcttttttttttgagagattttacaccccatccttttgccccctt 26737736  T
Q  283 tctg 286  Q
    ||||    
T  26737735 tctg 26737732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 191 - 300
Target Start/End: Original strand, 6324924 - 6325033
Alignment:
Q  191 ttgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctggttt 290  Q
    ||||||||||||||| |||  ||||||||||||||||||||||| |||||| ||||||  |||| ||||||  ||| ||  ||||||| ||||||| |||    
T  6324924 ttgcacttttcccccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgtcccctatagttttccctctttctgattt 6325023  T
Q  291 gaaggccccc 300  Q
     | |||||||    
T  6325024 tatggccccc 6325033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 185 - 286
Target Start/End: Complemental strand, 16911321 - 16911221
Alignment:
Q  185 gcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttc 284  Q
    |||||||||||||||  |||| |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||  ||| ||  |||||||||||||    
T  16911321 gcttaattgcactttcgcccc-tatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttccccctttc 16911223  T
Q  285 tg 286  Q
    ||    
T  16911222 tg 16911221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 274
Target Start/End: Complemental strand, 6495776 - 6495687
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||||||| || |||||||||  ||||||||||||||||||| | | |||||  |||||| |||||||||  ||||||||    
T  6495776 aggcttaattgcacttttcctccctatcttttgtgaattgtgcgattttgcacctccttttttt--ttgagcgattttgcacgtcatctttt 6495687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 26737481 - 26737569
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||||||| ||  |||||||||| ||||||||||||||||||||| | |||||  || | | |||||||||||||||||||    
T  26737481 aggcttaattgcacttttctcc--tatcttttgctaattgtgcgattttgcaccccctcttttt-ttttaacgattttgcaccccatctttt 26737569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 5793450 - 5793549
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    ||||||||||||||||||| | |  ||||||||||||||||||||||| || ||| ||||||  |||| ||||||| ||| ||  ||||||| |||||||    
T  5793450 ttaattgcacttttcccccttgtagtttgccaattgtgcgattttgcatcctatagttttaaacgagcgattttgccccctatagttttccctctttctg 5793549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 17851457 - 17851354
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||||||||  |   |||  |||||||||||||||||||| ||||||||| ||||||  |||| ||||||| ||| ||  |||||||||||    
T  17851457 aggcttaattgcacttttttcttttatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctatagttttccccctt 17851358  T
Q  283 tctg 286  Q
    ||||    
T  17851357 tctg 17851354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 26692399 - 26692498
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    |||||||||||||| |||  |||  |||| ||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  |||| ||||||||||    
T  26692399 ttaattgcactttttccctctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctataatttttcccctttctg 26692498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 280
Target Start/End: Complemental strand, 43495535 - 43495441
Alignment:
Q  187 ttaattgcacttttcccccatatctttt-gccaattgtgcgattttgcaccccatatt-tttaattgagctattttgcaccccatctttttccccc 280  Q
    ||||||||||||||||||| |||||||| | |||||||||||||||||||||| | || |||  |||||| ||||||||||||||| ||| |||||    
T  43495535 ttaattgcacttttccccc-tatctttttgtcaattgtgcgattttgcaccccctcttatttttttgagcaattttgcaccccatcatttgccccc 43495441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 43495658 - 43495569
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt 275  Q
    |||||||||||||||| || || ||| |||||| ||||||||||||||||| ||| | |||||  |||||| ||||||||||||||||||||    
T  43495658 ggcttaattgcactttcccacc-tatattttgctaattgtgcgattttgcatcccctctttttt-ttgagcgattttgcaccccatcttttt 43495569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 274
Target Start/End: Original strand, 6171156 - 6171245
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||||||||| |||||||||  |||||||||||||||||||   | |||||  |||||  ||||||||||| |||||||    
T  6171156 ggcttaattgcacttttccccc-tatcttttgttaattgtgcgattttgcaccttttttttttttttgagtgattttgcaccctatctttt 6171245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 274
Target Start/End: Original strand, 32672842 - 32672932
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||||   || |||||||||  ||||||||||||||||||||  | |||||  |||||| ||||||||||| |||||||    
T  32672842 ggcttaattgcacttttgttccttatcttttgttaattgtgcgattttgcaccctctctttttttttgagcgattttgcaccctatctttt 32672932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 286
Target Start/End: Original strand, 7979565 - 7979667
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    ||||||| ||||||||||||||  |||   |||| ||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||||| ||    
T  7979565 taggctttattgcacttttcccttatag--tttgacaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccctct 7979662  T
Q  282 ttctg 286  Q
    |||||    
T  7979663 ttctg 7979667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 18750178 - 18750102
Alignment:
Q  185 gcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgc 262  Q
    |||||||||||||| |||||| |||  |||| ||||||||||||||||||||||||| ||||||  |||| |||||||    
T  18750178 gcttaattgcacttctccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 18750102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 187 - 286
Target Start/End: Complemental strand, 19141898 - 19141801
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    ||||||||||||| |||| |||   ||||||||||||||||||||||| |||||| ||| ||  |||| ||||||| ||| ||  |||||||||||||||    
T  19141898 ttaattgcactttccccctatag--tttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctatagttttccccctttctg 19141801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 18055367 - 18055309
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttt 245  Q
    |||||||||||||| |||  || |||||| |||||||||||||||||||||||| ||||    
T  18055367 ttaattgcactttttccctctaccttttgtcaattgtgcgattttgcaccccatctttt 18055309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 248
Target Start/End: Original strand, 19141446 - 19141507
Alignment:
Q  186 cttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaa 248  Q
    ||||||||||||||| |||| |||  |||||||||||||| ||||||||||||||| ||||||    
T  19141446 cttaattgcactttttccccctatagtttgccaattgtgc-attttgcaccccatagttttaa 19141507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 29230280 - 29230334
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcacc 236  Q
    ||||||||||||||||||||| |  ||||||||| |||||||| |||||||||||    
T  29230280 taggcttaattgcacttttcctctctatcttttgtcaattgtgtgattttgcacc 29230334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 7980057 - 7979993
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaa 248  Q
    |||||||||||||||||| || | |||  ||||| |||||||||||||||||||||||| ||||||    
T  7980057 aggcttaattgcactttttcctc-tatagtttgctaattgtgcgattttgcaccccatagttttaa 7979993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 15321515 - 15321600
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatt-tttaattgagctattttgcaccccatct 271  Q
    ||||||||||||||  ||| |||||||| |||| |||||||||||||||||  | || |||  |||||| ||||||||||||||||    
T  15321515 ttaattgcacttttgtcccctatctttttccaactgtgcgattttgcaccctctcttctttttttgagcgattttgcaccccatct 15321600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 17345736 - 17345822
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt 275  Q
    ||||||||||||||||||  |||||||||| |||| ||| |||||||||||| | ||||   |||||  ||||||||||| ||||||||    
T  17345736 ttaattgcacttttcccc--tatcttttgctaattatgcaattttgcaccccctcttttattttgagtgattttgcaccctatcttttt 17345822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 247 - 300
Target Start/End: Original strand, 31641545 - 31641598
Alignment:
Q  247 aattgagctattttgcaccccatctttttccccctttctggtttgaaggccccc 300  Q
    ||||| || ||||||||| ||||| ||| |||||||||||||||||||||||||    
T  31641545 aattgtgcgattttgcactccatcctttcccccctttctggtttgaaggccccc 31641598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 274
Target Start/End: Complemental strand, 17346090 - 17345999
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||||||| ||   |||||||||| ||||||||||||||||||| | | ||| |  |||||| |||||||| ||||| ||||    
T  17346090 taggcttaattgcactttttcctt-tatcttttgctaattgtgcgattttgcacctcctctttatttttgagcgattttgcatcccatatttt 17345999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 273
Target Start/End: Original strand, 18055169 - 18055257
Alignment:
Q  187 ttaattgcacttttcccccatatc-ttttgccaattgtgcgattttgcaccccatatt-tttaattgagctattttgcaccccatcttt 273  Q
    |||||||||||||| | || |||  |||||||||||||||||||||||||||| | || |||  |||||| |||||||| |||||||||    
T  18055169 ttaattgcacttttgcaccctataattttgccaattgtgcgattttgcaccccctcttatttttttgagcgattttgcatcccatcttt 18055257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 40221313 - 40221364
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcacc 236  Q
    ||||||||||||| |||||||| |||||||||| |||||| ||||||||||||    
T  40221313 ggcttaattgcacctttccccc-tatcttttgctaattgttcgattttgcacc 40221364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 279
Target Start/End: Complemental strand, 40221538 - 40221446
Alignment:
Q  189 aattgcacttttcccccatatctttt-gccaattgtgcgattttgcaccccatatt-tttaattgagctattttgcaccccatctttttcccc 279  Q
    |||||| ||||| |||| |||||||| || ||||||||||||||||||||| | || |||  |||||| |||||||||| |||||||| ||||    
T  40221538 aattgcgcttttgccccctatctttttgctaattgtgcgattttgcaccccttcttctttttttgagcgattttgcacctcatcttttgcccc 40221446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 40469655 - 40469607
Alignment:
Q  189 aattgcacttttcccccatatc-ttttgccaattgtgcgattttgcacc 236  Q
    ||||||||||||||||| |||| |||||| |||||||||||||||||||    
T  40469655 aattgcacttttcccccttatcgttttgctaattgtgcgattttgcacc 40469607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 43495308 - 43495356
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgatttt 231  Q
    ||||||||||||||||||||| | ||| |||||| ||||||||||||||    
T  43495308 aggcttaattgcacttttcccacctatattttgctaattgtgcgatttt 43495356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 273
Target Start/End: Complemental strand, 40221631 - 40221545
Alignment:
Q  180 tataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttt 273  Q
    |||||| |||||||||||||| || |||||||||||| ||||||||        ||||||| |||||  |||||| ||||||||||||||||||    
T  40221631 tataggtttaattgcactttttcctcatatcttttgctaattgtgc-------aaccccatctttttttttgagcgattttgcaccccatcttt 40221545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 41790494 - 41790592
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    ||||||||| ||||||||| |||  |||| ||||||||||||||||||||||||  ||| ||  |||| ||||||| ||| ||  |||||| ||||||||    
T  41790494 ttaattgcatttttccccc-tatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctcctttctg 41790592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 26737706 - 26737657
Alignment:
Q  189 aattgcacttttcccccatatctttt-gccaattgtgcgattttgcaccc 237  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  26737706 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccc 26737657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 29343584 - 29343633
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcacc 236  Q
    |||||||||||||||| |  ||||||||| |||||||| |||||||||||    
T  29343584 ttaattgcacttttcctctctatcttttgtcaattgtgtgattttgcacc 29343633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 32673069 - 32673020
Alignment:
Q  189 aattgcacttttcccccatatctttt-gccaattgtgcgattttgcaccc 237  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  32673069 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 32673020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 6495468 - 6495519
Alignment:
Q  185 gcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccc 237  Q
    |||||||||||||||||| || |||| ||||  ||||||||||||||||||||    
T  6495468 gcttaattgcacttttcctccctatc-tttgttaattgtgcgattttgcaccc 6495519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 11883751 - 11883799
Alignment:
Q  189 aattgcacttttcccccatatctttt-gccaattgtgcgattttgcacc 236  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  11883751 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 11883799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 29230602 - 29230562
Alignment:
Q  181 ataggcttaattgcacttttcccccatatcttttgccaatt 221  Q
    ||||||||||||||| |||||| |||||||||||| |||||    
T  29230602 ataggcttaattgcatttttcctccatatcttttgtcaatt 29230562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 29343901 - 29343861
Alignment:
Q  181 ataggcttaattgcacttttcccccatatcttttgccaatt 221  Q
    ||||||||||||||| |||||| |||||||||||| |||||    
T  29343901 ataggcttaattgcatttttcctccatatcttttgtcaatt 29343861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 1e-47; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 184 - 312
Target Start/End: Original strand, 44599489 - 44599617
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||||||    
T  44599489 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 44599588  T
Q  284 ctggtttgaaggccccccatgtgttttag 312  Q
    ||| |||| ||||||||||||||||||||    
T  44599589 ctgatttggaggccccccatgtgttttag 44599617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 182 - 312
Target Start/End: Original strand, 13863311 - 13863441
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||| |||||||  |||| ||||||||||||||||||||||| ||    
T  13863311 taggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccctct 13863410  T
Q  282 ttctggtttgaaggccccccatgtgttttag 312  Q
    ||||| |||| ||||||||||||||||||||    
T  13863411 ttctgatttggaggccccccatgtgttttag 13863441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 183 - 304
Target Start/End: Complemental strand, 44600190 - 44600069
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||  |||| |||||||||||||||||||||||||||    
T  44600190 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctt 44600091  T
Q  283 tctggtttgaaggccccccatg 304  Q
    |||| |||| ||||||||||||    
T  44600090 tctgatttggaggccccccatg 44600069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 183 - 312
Target Start/End: Complemental strand, 13864011 - 13863884
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  13864011 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattt-gcaccccatatttttaaacgagcgattttgcaccccatctttttccccctt 13863913  T
Q  283 tctggtttgaaggccccccatgtgttttag 312  Q
    |||| |||| ||| |||| |||||||||||    
T  13863912 tctgatttggagg-ccccgatgtgttttag 13863884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 182 - 312
Target Start/End: Complemental strand, 8643822 - 8643693
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    ||||||||||||||||||||  || |||||||| ||||||||||||||||||||||||| || ||||  |||| ||||||||||||||||||||||||||    
T  8643822 taggcttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgttattaaacgagcgattttgcaccccatctttttccccct 8643723  T
Q  282 ttctggtttgaaggccccccatgtgttttag 312  Q
    ||||| |||||||| |||| |||||||||||    
T  8643722 ttctgatttgaagg-cccctatgtgttttag 8643693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 173 - 300
Target Start/End: Complemental strand, 46816376 - 46816249
Alignment:
Q  173 tatataatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctt 272  Q
    |||| ||| ||||||||||||||||||| |||  |||||||| |||||| ||||||||||||||||||||||||||  |||| |||||| |||||||| |    
T  46816376 tataaaatttaggcttaattgcactttttcccgctatcttttaccaattatgcgattttgcaccccatatttttaaacgagcgattttgtaccccatcat 46816277  T
Q  273 tttccccctttctggtttgaaggccccc 300  Q
    ||| ||||||||||||||||||||||||    
T  46816276 ttttcccctttctggtttgaaggccccc 46816249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 182 - 284
Target Start/End: Complemental strand, 9412381 - 9412278
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccc 280  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||  |||||| |||||||||||||||||||| |||||    
T  9412381 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccc 9412282  T
Q  281 tttc 284  Q
    ||||    
T  9412281 tttc 9412278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 178 - 286
Target Start/End: Complemental strand, 3687716 - 3687608
Alignment:
Q  178 aatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-c 276  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||  |||||| |||||||||||||||||||| |    
T  3687716 aatattggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcttttt-tttgagcgattttgcaccccatctttttgc 3687618  T
Q  277 cccctttctg 286  Q
    ||||||||||    
T  3687617 cccctttctg 3687608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 182 - 286
Target Start/End: Original strand, 10533032 - 10533136
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||||||||    
T  10533032 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 10533131  T
Q  282 ttctg 286  Q
    |||||    
T  10533132 ttctg 10533136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 178 - 286
Target Start/End: Complemental strand, 37889319 - 37889211
Alignment:
Q  178 aatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcc 277  Q
    |||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  |||||     
T  37889319 aatataggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttct 37889220  T
Q  278 ccctttctg 286  Q
    |||||||||    
T  37889219 ccctttctg 37889211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 17156966 - 17157069
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||||| |||||| ||||| ||||||| ||| ||  |||||||||||    
T  17156966 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttccccctt 17157065  T
Q  283 tctg 286  Q
    ||||    
T  17157066 tctg 17157069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 184 - 286
Target Start/End: Original strand, 37888833 - 37888935
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||||||||||    
T  37888833 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 37888932  T
Q  284 ctg 286  Q
    |||    
T  37888933 ctg 37888935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 284
Target Start/End: Complemental strand, 37972451 - 37972350
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  |||||||||||    
T  37972451 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 37972352  T
Q  283 tc 284  Q
    ||    
T  37972351 tc 37972350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 20419379 - 20419276
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  |||||||||||    
T  20419379 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 20419280  T
Q  283 tctg 286  Q
    ||||    
T  20419279 tctg 20419276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 22740155 - 22740258
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  |||||||||||    
T  22740155 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 22740254  T
Q  283 tctg 286  Q
    ||||    
T  22740255 tctg 22740258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 286
Target Start/End: Original strand, 20418886 - 20418990
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||| ||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||| ||||    
T  20418886 taggtttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcaccct 20418985  T
Q  282 ttctg 286  Q
    |||||    
T  20418986 ttctg 20418990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 3205148 - 3205045
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||||||||||||| |||  |||| |||||||||||||||||||||| || ||||||  |||| ||||||| ||| ||  |||||||||||    
T  3205148 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctatagttttccccctt 3205049  T
Q  283 tctg 286  Q
    ||||    
T  3205048 tctg 3205045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 9035347 - 9035244
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttc-cccctt 282  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||| ||||||    
T  9035347 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctcccctt 9035248  T
Q  283 tctg 286  Q
    ||||    
T  9035247 tctg 9035244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 9412022 - 9412113
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||||||||||| | |||||  |||||| ||||| ||||| |||||||    
T  9412022 aggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttccaccctatctttt 9412113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 18863970 - 18864069
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    ||||||||||||||||||| |||  |||| ||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  |||||||||||||||    
T  18863970 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 18864069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 286
Target Start/End: Original strand, 9034865 - 9034970
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgca-ccccatatttttaattgagctattttgcaccccatctttttccccc 280  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||| |||| ||||||| ||||||  |||| ||||||| ||| ||  |||||||||    
T  9034865 taggcttaattgcacttttcccccctataatttgccaattgtgcgattctgcacccccatagttttaaacgagcgattttgccccctatagttttccccc 9034964  T
Q  281 tttctg 286  Q
    ||||||    
T  9034965 tttctg 9034970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 13744287 - 13744188
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  |||||||||||    
T  13744287 aggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 13744189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 18864457 - 18864354
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||| ||||||||||| |||  ||||||||||||||||||||||||| |||| ||||||  |||| ||||||| ||| ||  ||||||||||    
T  18864457 taggcttaattgtacttttccccc-tatagtttgccaattgtgcgattttgcacctcatagttttaaaagagcgattttgccccctatagttttccccct 18864359  T
Q  282 ttctg 286  Q
    |||||    
T  18864358 ttctg 18864354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 286
Target Start/End: Original strand, 37971958 - 37972062
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||||||||||| ||| | |  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  |||| |||||    
T  37971958 taggcttaattgcacttttctcccctgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccct 37972057  T
Q  282 ttctg 286  Q
    |||||    
T  37972058 ttctg 37972062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 29292921 - 29293024
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||||||||||||| |||  ||||||||||||||||||||||| |||||  ||| ||  |||| ||||||| ||| ||  |||||||||||    
T  29292921 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcatcccattgtttaaaacgagcgattttgccccctatagttttccccctt 29293020  T
Q  283 tctg 286  Q
    ||||    
T  29293021 tctg 29293024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 184 - 286
Target Start/End: Original strand, 13741557 - 13741659
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||| ||||||||| |||  ||| |||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||||| ||||    
T  13741557 ggcttaattgcatttttcccccctatagtttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccacttt 13741656  T
Q  284 ctg 286  Q
    |||    
T  13741657 ctg 13741659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 15567331 - 15567246
Alignment:
Q  178 aatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccc 266  Q
    |||||||| ||||||||||||||||||| ||||||||||   | ||||||||||||||| |||||||||  |||||| |||||||||||    
T  15567331 aatataggtttaattgcacttttcccccctatcttttgc---tagtgcgattttgcaccgcatatttttttttgagcgattttgcaccc 15567246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 36527852 - 36527750
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||| ||||||| |||||  |||||||||| |||||||||||| |||||| ||||||  |||| ||||||| ||| ||  ||||||||||||    
T  36527852 ggcttaattgcatttttccctcatatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccccttt 36527753  T
Q  284 ctg 286  Q
    |||    
T  36527752 ctg 36527750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 274
Target Start/End: Complemental strand, 23686773 - 23686683
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||||||| |||| |||||||||| ||||||||||||||| ||||| | |||||  | |||| |||||||||||||||||||    
T  23686773 taggcttaattgcactttttccccctatcttttgctaattgtgcgattttg-acccc-tcttttttttggagcgattttgcaccccatctttt 23686683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 184 - 286
Target Start/End: Original strand, 3204669 - 3204769
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||| |||| |||   |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||||| ||||    
T  3204669 ggcttaattgcactttccccctatag--tttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccctatagttttccctcttt 3204766  T
Q  284 ctg 286  Q
    |||    
T  3204767 ctg 3204769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 13772639 - 13772702
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttt 245  Q
    ||||||||||||||||||||| || |||||||||| ||||||| ||||||||||||||| ||||    
T  13772639 taggcttaattgcacttttcctccctatcttttgctaattgtgtgattttgcaccccatctttt 13772702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 13772955 - 13772872
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccat-atttttaattgagctattttgcaccc 266  Q
    |||||||||||||||||||||| |||| ||||| ||||||||||||||||||||| |  |||||  |||||| |||||||||||    
T  13772955 ggcttaattgcacttttcccccctatcatttgctaattgtgcgattttgcaccccctcttttttttttgagcgattttgcaccc 13772872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 16199032 - 16198965
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaatt 250  Q
    |||||||||||||||||| |||  |||  |||||||||||||||||||||||||||||| ||||||||    
T  16199032 aggcttaattgcactttttcccattatagtttgccaattgtgcgattttgcaccccatagttttaatt 16198965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 29293400 - 29293298
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||| ||||||||| |||  |||||||||||||||||||||||| ||||  ||| ||  |||| ||||||| ||| ||  ||||||||||||    
T  29293400 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcactccattgtttaaaacgagcgattttgccccctatagttttcccccttt 29293301  T
Q  284 ctg 286  Q
    |||    
T  29293300 ctg 29293298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 286
Target Start/End: Complemental strand, 42419085 - 42418980
Alignment:
Q  181 ataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgca-ccccatatttttaattgagctattttgcaccccatctttttcccc 279  Q
    ||||| ||||||||||||||||||| |||  ||||||||||||||| ||||||| ||||||| ||||||  |||| ||||||| ||| ||  ||||||||    
T  42419085 ataggtttaattgcacttttccccc-tatagtttgccaattgtgcgtttttgcacccccatagttttaaacgagcgattttgccccctatagttttcccc 42418987  T
Q  280 ctttctg 286  Q
    |||||||    
T  42418986 ctttctg 42418980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 274
Target Start/End: Original strand, 3687353 - 3687445
Alignment:
Q  184 ggcttaattgcacttttccccca-tatcttttgccaattgtgcgattttgcaccccat-atttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||||||||||  |||||||||  ||||||||||||||||||||| |  |||||  |||||| ||||||||||| |||||||    
T  3687353 ggcttaattgcacttttccccccctatcttttgttaattgtgcgattttgcaccccctcttttttttttgagcgattttgcaccctatctttt 3687445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 279
Target Start/End: Complemental strand, 22740641 - 22740550
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccc 279  Q
    ||||||||||||||||||| |||  |||| ||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||||||    
T  22740641 ttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctatagttttcccc 22740550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 48359320 - 48359383
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaa 248  Q
    |||||||||||||||||||||| |||  |||| ||||||||||||||||||||||||| ||||||    
T  48359320 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaa 48359383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 275
Target Start/End: Original strand, 5735253 - 5735344
Alignment:
Q  185 gcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcac-cccatatttttaattgagctattttgcaccccatcttttt 275  Q
    ||||||||||||||||| ||| ||||||| || |||||||||||||||||| ||  | |||||  |||||| |||||||||| |||||||||    
T  5735253 gcttaattgcacttttctcccctatctttggctaattgtgcgattttgcactcctttttttttttttgagcgattttgcaccacatcttttt 5735344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 27096392 - 27096306
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||||||| ||| | || ||  |||||| |||||||||||||| ||||    
T  27096392 ttaattgcacttttccccc-tatcttttgtcaattgtgtgattttgcatcccctcttcttttttgagcgattttgcaccccatatttt 27096306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 27181911 - 27181997
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||||||| ||| | || ||  |||||| |||||||||||||| ||||    
T  27181911 ttaattgcacttttccccc-tatcttttgtcaattgtgtgattttgcatcccctcttcttttttgagcgattttgcaccccatatttt 27181997  T

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Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 38826968 - 38826865
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||| ||||||||| |||  |||| |||||||||||||||||||| |||| ||||||  || |  |||||| ||| ||  |||||||||||    
T  38826968 aggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacgaacggttttgccccctatagttttccccctt 38826869  T
Q  283 tctg 286  Q
    ||||    
T  38826868 tctg 38826865  T

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Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 289
Target Start/End: Original strand, 23686421 - 23686525
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccctt 282  Q
    |||||||||||||||||||||| |||||||||| |||||| | |||||||||||  | | |||  |||||| |||||||| ||||||||||| |||| ||    
T  23686421 ggcttaattgcacttttccccc-tatcttttgctaattgtacaattttgcaccctctctatttttttgagcgattttgca-cccatctttttgccccatt 23686518  T
Q  283 tctggtt 289  Q
    |||||||    
T  23686519 tctggtt 23686525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 187 - 280
Target Start/End: Original strand, 27096168 - 27096262
Alignment:
Q  187 ttaattgcacttttcccccatatcttttg-ccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccc 280  Q
    |||||||||||||| |||| ||||||||  ||||||||||||||||||| ||| | |||||  |||||| ||||| ||||| ||||||| |||||    
T  27096168 ttaattgcacttttgccccctatctttttaccaattgtgcgattttgcaacccctctttttttttgagcaatttttcaccctatcttttgccccc 27096262  T

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Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 187 - 280
Target Start/End: Complemental strand, 27182135 - 27182041
Alignment:
Q  187 ttaattgcacttttcccccatatcttttg-ccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccc 280  Q
    |||||||||||||| |||| ||||||||  ||||||||||||||||||| ||| | |||||  |||||| ||||| ||||| ||||||| |||||    
T  27182135 ttaattgcacttttgccccctatctttttaccaattgtgcgattttgcaacccctctttttttttgagcaatttttcaccctatcttttgccccc 27182041  T

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Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 38191265 - 38191367
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    |||||||||||||||| |  |||||||||| |||| |||||||||||| ||  | |||||  || |||  ||||||| |||||||||||||||||||| |    
T  38191265 ttaattgcacttttcctctttatcttttgctaattatgcgattttgcatcctcttttttttttttagcgcttttgcatcccatctttttccccctttcgg 38191364  T
Q  287 gtt 289  Q
    |||    
T  38191365 gtt 38191367  T

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Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 285
Target Start/End: Original strand, 42418590 - 42418692
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    |||||||||| |||||||||||| |||  ||||| ||||||||||||||| | || ||| ||||||  |||| ||||||| ||| ||  |||||||||||    
T  42418590 aggcttaatttcacttttcccccctatagtttgctaattgtgcgattttgtatcctatagttttaaacgagcgattttgccccctatagttttccccctt 42418689  T
Q  283 tct 285  Q
    |||    
T  42418690 tct 42418692  T

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Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 33628718 - 33628653
Alignment:
Q  180 tataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttt 245  Q
    |||||||| |||||||||||| |||  |||||||| | ||||||||||||||||||||||| ||||    
T  33628718 tataggctaaattgcactttttccctctatcttttactaattgtgcgattttgcaccccatctttt 33628653  T

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Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 6908211 - 6908302
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||||||||||| ||||| |||  ||||||||||||||||||||  | |||||  || ||| ||||||||| | |||||||    
T  6908211 taggcttaattgcacttttccccc-tatctattgttaattgtgcgattttgcacccttttttttttttttagcgattttgcactctatctttt 6908302  T

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Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 274
Target Start/End: Original strand, 15567019 - 15567079
Alignment:
Q  211 ttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||| ||||||||||||||||||||| |||||||  |||||| |||||||||||||||||||    
T  15567019 ttttgctaattgtgcgattttgcacccc-tattttt--ttgagcgattttgcaccccatctttt 15567079  T

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Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 274
Target Start/End: Original strand, 29291808 - 29291896
Alignment:
Q  186 cttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||| | || |||||||||  |||| |||||||||||||||| | |||||  | |||| ||||| |||||||||||||    
T  29291808 cttaattgcactttttctccctatcttttgataattatgcgattttgcaccccctcttttttttagagcgattttacaccccatctttt 29291896  T

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Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 48359713 - 48359610
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    ||||| ||||||||||||| |||| |||  ||| ||||||||||||||||||||| |||| ||| ||  |||| ||||||| ||| ||  ||||||||||    
T  48359713 taggcataattgcactttttcccc-tatagtttaccaattgtgcgattttgcaccacatagtttaaaacgagcgattttgccccctatagttttccccct 48359615  T
Q  282 ttctg 286  Q
    |||||    
T  48359614 ttctg 48359610  T

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Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 246
Target Start/End: Original strand, 35079960 - 35080021
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatattttt 246  Q
    |||||||||||||||||||||| |||||||||| ||||||| | ||||||||||  |||||||    
T  35079960 ggcttaattgcacttttccccc-tatcttttgctaattgtggggttttgcacccactattttt 35080021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 5349784 - 5349724
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatattttta 247  Q
    |||||||||||||||| |||   |||||||||  ||||||||||||||||||||||| ||||||    
T  5349784 ggcttaattgcactttcccc---tatcttttgttaattgtgcgattttgcaccccatcttttta 5349724  T

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Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 8953941 - 8953889
Alignment:
Q  185 gcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcacccc 238  Q
    ||||||||||||||||||||| |||||||||  |||||||| ||||||||||||    
T  8953941 gcttaattgcacttttccccc-tatcttttgttaattgtgcaattttgcacccc 8953889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 18925373 - 18925315
Alignment:
Q  185 gcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttt 245  Q
    |||||||||||||||||| | ||||  ||||| ||||||||||||||||||||||| ||||    
T  18925373 gcttaattgcacttttcctctatat--tttgctaattgtgcgattttgcaccccatttttt 18925315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 29292095 - 29292001
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccc 280  Q
    |||||||||||||||||  ||  || ||||||| |||||||||||||| |||||| | |||||  || ||| ||||||||||| |||||||| ||||    
T  29292095 ggcttaattgcacttttttcctctaacttttgctaattgtgcgattttccaccccctcttttt--tttagcgattttgcaccctatctttttgcccc 29292001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 30857959 - 30857902
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccat 240  Q
    ||||||||||||||||||  | | ||||||||| ||||||||| ||||||||||||||    
T  30857959 aggcttaattgcacttttgtctcttatcttttgtcaattgtgcaattttgcaccccat 30857902  T

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Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 36527387 - 36527447
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaa 248  Q
    |||||||||||||| |||| |||  |||| ||||||||||||||||||||||||| ||||||    
T  36527387 ttaattgcactttttcccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaa 36527447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 18925062 - 18925114
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcacc 236  Q
    ||||||||||||||||||  || |||||||||| |||||||| ||||||||||    
T  18925062 ggcttaattgcacttttcttccctatcttttgctaattgtgcaattttgcacc 18925114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 289
Target Start/End: Original strand, 27096047 - 27096149
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccctt 282  Q
    |||||||||||||||| ||||| ||| |||||| ||||||||||||||| | ||    |||||  || ||| |||||||||||||| ||||| |||||||    
T  27096047 ggcttaattgcactttcccccc-tatattttgctaattgtgcgattttgtatcc---tttttttttttagcgattttgcaccccatttttttgccccctt 27096142  T
Q  283 tctggtt 289  Q
    |||||||    
T  27096143 tctggtt 27096149  T

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Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 289
Target Start/End: Complemental strand, 27182256 - 27182154
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccctt 282  Q
    |||||||||||||||| ||||| ||| |||||| ||||||||||||||| | ||    |||||  || ||| |||||||||||||| ||||| |||||||    
T  27182256 ggcttaattgcactttcccccc-tatattttgctaattgtgcgattttgtatcc---tttttttttttagcgattttgcaccccatttttttgccccctt 27182161  T
Q  283 tctggtt 289  Q
    |||||||    
T  27182160 tctggtt 27182154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 18925280 - 18925229
Alignment:
Q  188 taattgcacttttcccccatatctttt-gccaattgtgcgattttgcacccc 238  Q
    |||||| |||||| |||| |||||||| ||||||||||||||||||||||||    
T  18925280 taattgaacttttgccccctatctttttgccaattgtgcgattttgcacccc 18925229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 274
Target Start/End: Original strand, 5349497 - 5349550
Alignment:
Q  218 aattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||||||||| | |||||   ||||| |||||||||||||||||||    
T  5349497 aattgtgcgattttgcacccccttttttt---tgagcgattttgcaccccatctttt 5349550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 237
Target Start/End: Complemental strand, 6908534 - 6908485
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccc 237  Q
    ||||||||||||| ||||| ||| |||||| ||||||||||||||||||||    
T  6908534 ttaattgcactttcccccc-tattttttgctaattgtgcgattttgcaccc 6908485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 34235737 - 34235778
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtg 224  Q
    ||||||||||||||||||||| |  |||||||||||||||||    
T  34235737 aggcttaattgcacttttccctcccatcttttgccaattgtg 34235778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 38191387 - 38191435
Alignment:
Q  188 taattgcacttttcccccatatctttt-gccaattgtgcgattttgcacc 236  Q
    ||||||||||||| |||| |||||||| ||||||||||||||||||||||    
T  38191387 taattgcactttttcccc-tatctttttgccaattgtgcgattttgcacc 38191435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 39983700 - 39983753
Alignment:
Q  185 gcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcacccc 238  Q
    ||||||||||||||||||||| ||||||||   |||| |||||||| |||||||    
T  39983700 gcttaattgcacttttcccccttatcttttattaattatgcgatttcgcacccc 39983753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 266
Target Start/End: Original strand, 33628397 - 33628475
Alignment:
Q  186 cttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccc 266  Q
    ||||||||||||||| | || |||||||||| |||||||| |||||||| ||| | |||||  |||||| |||||||||||    
T  33628397 cttaattgcactttt-ctccttatcttttgctaattgtgcaattttgcatcccctcttttt-tttgagcgattttgcaccc 33628475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 34236030 - 34235978
Alignment:
Q  186 cttaattgcacttttcccccatatcttttgccaattgtgcgattttgcacccc 238  Q
    |||||||| | |||||||   |||||||||| |||||||||||||||||||||    
T  34236030 cttaattgtatttttcccttctatcttttgctaattgtgcgattttgcacccc 34235978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 246
Target Start/End: Complemental strand, 35080259 - 35080215
Alignment:
Q  202 ccccatatcttttgccaattgtgcgattttgcaccccatattttt 246  Q
    |||| |||||||||  ||||||||||||||||||||||| |||||    
T  35080259 ccccttatcttttgttaattgtgcgattttgcaccccatcttttt 35080215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 2e-46; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 182 - 312
Target Start/End: Original strand, 13026633 - 13026763
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||| |||||||  |||| ||||||||||||||||||||||||||    
T  13026633 taggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacctcatgtttttaaacgagcgattttgcaccccatctttttccccct 13026732  T
Q  282 ttctggtttgaaggccccccatgtgttttag 312  Q
    ||||| |||| ||||||||||||||||||||    
T  13026733 ttctgatttggaggccccccatgtgttttag 13026763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 184 - 312
Target Start/End: Complemental strand, 39724102 - 39723974
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||||||    
T  39724102 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 39724003  T
Q  284 ctggtttgaaggccccccatgtgttttag 312  Q
    ||| |||| |||||| |||||||||||||    
T  39724002 ctgatttggaggccctccatgtgttttag 39723974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 183 - 304
Target Start/End: Complemental strand, 9823416 - 9823295
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||  |||| |||||||||||||||||||||||||||    
T  9823416 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctt 9823317  T
Q  283 tctggtttgaaggccccccatg 304  Q
    |||| |||| ||||||||||||    
T  9823316 tctgatttggaggccccccatg 9823295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 187 - 304
Target Start/End: Complemental strand, 13027332 - 13027215
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||  |||| |||||||||||||||||||||||||||||||    
T  13027332 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 13027233  T
Q  287 gtttgaaggccccccatg 304  Q
     |||| ||||||||||||    
T  13027232 atttggaggccccccatg 13027215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 312
Target Start/End: Original strand, 22851390 - 22851518
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||| |||||||   ||| ||||||||||||||||||||||||||||    
T  22851390 ggcttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatgtttttaaacaagcgattttgcaccccatctttttcccccttt 22851489  T
Q  284 ctggtttgaaggccccccatgtgttttag 312  Q
    ||| |||| |||||| |||||||||||||    
T  22851490 ctgatttggaggccctccatgtgttttag 22851518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 180 - 312
Target Start/End: Complemental strand, 13937447 - 13937316
Alignment:
Q  180 tataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccc 279  Q
    |||||||||||||||||||||||||| ||| ||||| ||||||||||| |||||||||||| |||||||  |||  |||||||||| |||| ||||||||    
T  13937447 tataggcttaattgcacttttcccccctattttttgtcaattgtgcgaatttgcaccccatgtttttaaacgagtgattttgcacctcatccttttcccc 13937348  T
Q  280 ctttctggtttgaaggccccccatgtgttttag 312  Q
    ||||||||||||||||| |||||||||||||||    
T  13937347 ctttctggtttgaaggc-ccccatgtgttttag 13937316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 183 - 296
Target Start/End: Original strand, 13936722 - 13936833
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||| ||||||    
T  13936722 aggcttaattgcacttttccccc-tatcttttaccaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-cccctt 13936819  T
Q  283 tctggtttgaaggc 296  Q
    |||| |||||||||    
T  13936820 tctgatttgaaggc 13936833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 207 - 312
Target Start/End: Original strand, 39723425 - 39723530
Alignment:
Q  207 tatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctggtttgaaggccccccatgtg 306  Q
    |||||||||||||||||||||||||||| ||||| |||||||  |||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  39723425 tatcttttgccaattgtgcgattttgcatcccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgatttggaggccccccatgtg 39723524  T
Q  307 ttttag 312  Q
    ||||||    
T  39723525 ttttag 39723530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 312
Target Start/End: Original strand, 3307338 - 3307466
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||| ||||| ||| ||||||||| |||||||||||||||||| |||||||||||||   ||| ||||||||||||||||||||| ||||||    
T  3307338 ggcttaattgcatttttcacccctatcttttgtcaattgtgcgattttgcatcccatatttttaaacaagcgattttgcaccccatctttttctcccttt 3307437  T
Q  284 ctggtttgaaggccccccatgtgttttag 312  Q
    ||| |||| |||||||| |||||||||||    
T  3307438 ctgatttggaggccccctatgtgttttag 3307466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 312
Target Start/End: Original strand, 9822748 - 9822876
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||| ||| ||||||||  |||||||||||||||||||||||| |||||||  |||| ||||||||||  ||||||||||||||||    
T  9822748 ggcttaattgcacttttcacccctatcttttatcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccatatctttttcccccttt 9822847  T
Q  284 ctggtttgaaggccccccatgtgttttag 312  Q
    ||| |||| ||||| ||||||||||||||    
T  9822848 ctgatttggaggccacccatgtgttttag 9822876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 41662457 - 41662354
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccctt 282  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||| ||||||| |||||||||||||||||||| |||||||    
T  41662457 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcttttttattgagcgattttgcaccccatctttttgccccctt 41662358  T
Q  283 tctg 286  Q
    ||||    
T  41662357 tctg 41662354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 183 - 312
Target Start/End: Original strand, 6092776 - 6092902
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||| ||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||| ||    
T  6092776 aggcttaattgca-ttttccccc-tatcttttgtcaattgtgcgattttgcatcccatatttttaattgaacgattttgcaccccatctttttccccttt 6092873  T
Q  283 tctggtttgaaggccccccatgtgttttag 312  Q
    || | ||| |||| ||||||||||||||||    
T  6092874 tcagatttaaagg-cccccatgtgttttag 6092902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 186 - 284
Target Start/End: Original strand, 765736 - 765835
Alignment:
Q  186 cttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccctttc 284  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||  |||||| |||||||||||||||||||| |||||||||    
T  765736 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctttc 765835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 183 - 284
Target Start/End: Original strand, 12281123 - 12281225
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccct 281  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| | | |||||  |||||| |||||||||||||||||||| ||||||    
T  12281123 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacctcctctttttttttgagcgattttgcaccccatctttttgccccct 12281222  T
Q  282 ttc 284  Q
    |||    
T  12281223 ttc 12281225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 15156239 - 15156136
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccctt 282  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||||| | |||||  || ||| |||||||||||||||||||| |||||||    
T  15156239 ggcttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcaccccctcttttttttttagcgattttgcaccccatctttttgccccctt 15156140  T
Q  283 tctg 286  Q
    ||||    
T  15156139 tctg 15156136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 184 - 286
Target Start/End: Original strand, 43245871 - 43245974
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccctt 282  Q
    ||||||||||||||||| |||| |||||||||  ||||||||||||||||||||| | ||||| ||||||| |||||||||||||||||||| |||||||    
T  43245871 ggcttaattgcactttttccccctatcttttgataattgtgcgattttgcaccccctcttttttattgagcgattttgcaccccatctttttgccccctt 43245970  T
Q  283 tctg 286  Q
    ||||    
T  43245971 tctg 43245974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 15042143 - 15042261
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||| ||||||||||||| ||||| |||||||||||||||||| |||||||||||| ||  |||||| ||||| ||||||||| ||||| ||||||||||    
T  15042143 taggtttaattgcactttccccccttatcttttgccaattgtgtgattttgcaccctattgttttaaatgagcgattttgcacgccatcattttccccct 15042242  T
Q  282 ttctggtttgaaggccccc 300  Q
    ||||| ||| |||| ||||    
T  15042243 ttctgatttcaaggtcccc 15042261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 15155881 - 15155973
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||||||||||||| | |||||  |||||| ||||||||||| |||||||    
T  15155881 taggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 15155973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 286
Target Start/End: Original strand, 37396706 - 37396810
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||||||||||||||| |||  |||||| ||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||||||||    
T  37396706 taggcttaattgcacttttcccccctatagtttgccgattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 37396805  T
Q  282 ttctg 286  Q
    |||||    
T  37396806 ttctg 37396810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 37752084 - 37752176
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccat-atttttaattgagctattttgcaccccatcttttt 275  Q
    |||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||  |||||  |||||| ||||||||||||||||||||    
T  37752084 ggcttaattgcacttttcccccctatgttttgctaattgtgcgattttgcaccccatcttttttttttgagcgattttgcaccccatcttttt 37752176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 286
Target Start/End: Original strand, 16928926 - 16929043
Alignment:
Q  168 atacatatataatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcacccc 267  Q
    ||||||| || || |||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||| | |||||  ||||||  |||||||||||    
T  16928926 atacataaattatttaggcttaattgcactttccccccctatcttttgctaattgtgcgattttgcaccccctcttttt-tttgagc-gttttgcacccc 16929023  T
Q  268 atcttttt-ccccctttctg 286  Q
    |||||||| |||||||||||    
T  16929024 atctttttgccccctttctg 16929043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 183 - 285
Target Start/End: Original strand, 41662520 - 41662622
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||| ||||||  |||| ||||||| ||| ||  ||||| |||||    
T  41662520 aggcttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttctccctt 41662619  T
Q  283 tct 285  Q
    |||    
T  41662620 tct 41662622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 274
Target Start/End: Complemental strand, 43246231 - 43246139
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccat-atttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||| |  |||||  |||||| |||||||||||||||||||    
T  43246231 aggcttaattgcacttttcccccctatcttttgctaattgtgtgattttgcaccccctcttttttttttgagcgattttgcaccccatctttt 43246139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 17431286 - 17431389
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||||| |||| |||| ||||||  |||| ||||||| ||| ||  |||||||||||    
T  17431286 aggcttaattgcacttttcccccatatagtttgtcaattgtgcgatttttcacctcatagttttaaacgagcgattttgccccctatagttttccccctt 17431385  T
Q  283 tctg 286  Q
    ||||    
T  17431386 tctg 17431389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 274
Target Start/End: Complemental strand, 12281480 - 12281390
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||||||||| |||||||||  ||||||||||||||||||||| | |||||  |||||| ||||| ||||| |||||||    
T  12281480 ggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttccaccctatctttt 12281390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 274
Target Start/End: Complemental strand, 16929296 - 16929207
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||||| ||| |||||||||| ||||||||||||||||||||| | |||||  |||| | |||||||||||||||||||    
T  16929296 ggcttaattgcacttttctcccctatcttttgctaattgtgcgattttgcaccccctcttttt-tttgaacgattttgcaccccatctttt 16929207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 286
Target Start/End: Original strand, 24473343 - 24473445
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    ||||||||||||||||| |||| |||  ||||||||||||| |||||||||||||||| |||||| ||||| ||||||| ||| ||  ||| ||||||||    
T  24473343 ggcttaattgcactttttccccctatagtttgccaattgtgtgattttgcaccccataattttaaatgagcgattttgccccctatagtttccccccttt 24473442  T
Q  284 ctg 286  Q
    |||    
T  24473443 ctg 24473445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 274
Target Start/End: Complemental strand, 37752470 - 37752381
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||||||||| |||||||||  ||||||||||||||||||||| | |||||  |||||| |||||||||||||| ||||    
T  37752470 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctcttttt-tttgagcgattttgcaccccatatttt 37752381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 6199152 - 6199048
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    ||||||||||||||||||||  || |||  ||||||||||||||||||||||| |||||| ||||||  |||| ||||||| ||| ||  ||||||||||    
T  6199152 taggcttaattgcacttttcttccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccct 6199053  T
Q  282 ttctg 286  Q
    |||||    
T  6199052 ttctg 6199048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 286
Target Start/End: Complemental strand, 24473828 - 24473720
Alignment:
Q  178 aatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcc 277  Q
    |||| |||||||||||||||||||  || |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||  ||| ||  ||||||    
T  24473828 aataaaggcttaattgcacttttcatccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttcc 24473729  T
Q  278 ccctttctg 286  Q
    |||||||||    
T  24473728 ccctttctg 24473720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 34498611 - 34498507
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||||||||||||||| |||  ||||| |||||||||||||||||||||||| ||||||   ||  ||| ||| ||| || |||||||||||    
T  34498611 taggcttaattgcacttttcccccctatagtttgcaaattgtgcgattttgcaccccatagttttaaacaagagattatgccccctatatttttccccct 34498512  T
Q  282 ttctg 286  Q
    |||||    
T  34498511 ttctg 34498507  T

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Target: chr8; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 25438794 - 25438857
Alignment:
Q  186 cttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaat 249  Q
    |||||||||||||||||||| |||  |||||||||||||||||||||||||||||| |||||||    
T  25438794 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaat 25438857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 37397199 - 37397097
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||| ||||||| ||||||  |||| | ||||| ||| ||   |||||||||||    
T  37397199 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgactttgccccctatagatttcccccttt 37397100  T
Q  284 ctg 286  Q
    |||    
T  37397099 ctg 37397097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 288
Target Start/End: Complemental strand, 3463999 - 3463894
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccctt 282  Q
    |||||||||||||||||||||| ||| |||||| ||||||||||| ||||||||  |  |||   |||||| |||||||||||||||||||| |||| ||    
T  3463999 ggcttaattgcacttttcccccctatattttgctaattgtgcgatcttgcaccctctcctttgttttgagcgattttgcaccccatctttttaccccgtt 3463900  T
Q  283 tctggt 288  Q
    ||||||    
T  3463899 tctggt 3463894  T

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Target: chr8; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 186 - 283
Target Start/End: Original strand, 15442765 - 15442862
Alignment:
Q  186 cttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||| ||||||||| ||| ||| |||||||||| ||||||||||||||| |||||||  | || ||||||||||| ||| ||||||| ||||    
T  15442765 cttaattgcatttttcccccctatatttcgccaattgtgtgattttgcaccccatgtttttaaacgtgcgattttgcaccctatccttttcccgcttt 15442862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 286
Target Start/End: Original strand, 6198656 - 6198760
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||||||||||| |||||||  | | |||||||||||||||||||||| ||| ||||||  |||| ||||||| ||| ||  |||||||| |    
T  6198656 taggcttaattgcacttttctcccatatggtcttccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccat 6198755  T
Q  282 ttctg 286  Q
    |||||    
T  6198756 ttctg 6198760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 274
Target Start/End: Complemental strand, 18020141 - 18020053
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||||| |||  |||||||||  ||||||||||||||||||||| | |||||  |||||| |||||||||||||||||||    
T  18020141 aggcttaattgcacttttaccc--tatcttttgttaattgtgcgattttgcaccccctcttttt-tttgagcgattttgcaccccatctttt 18020053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 20861693 - 20861590
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||| |||| |||| |||  | |||||||||||||||||||||||||||| ||||||  |||| |||||||  || ||  |||||||||||    
T  20861693 aggcttaattgcattttttccccctatagtctgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgcctcctataattttccccctt 20861594  T
Q  283 tctg 286  Q
    ||||    
T  20861593 tctg 20861590  T

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Target: chr8; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 184 - 274
Target Start/End: Original strand, 34313765 - 34313852
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||||||||  |||||||||  ||||||||||||||||||||| | |||||  |||||| ||||||||||| |||||||    
T  34313765 ggcttaattgcacttttcccc--tatcttttgttaattgtgcgattttgcaccccctcttttt-tttgagcgattttgcaccctatctttt 34313852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 187 - 266
Target Start/End: Original strand, 34498125 - 34498204
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccc 266  Q
    |||||||||||||| |||| |||  |||| ||||||||||||||||||||||||| ||||||  |||| |||||||||||    
T  34498125 ttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgcaccc 34498204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 41662106 - 41662197
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||| ||| ||||||||||||||  ||||||||||||||||||||| | |||||  || ||| ||||||||||  |||||||    
T  41662106 aggcttaattgcacattttccccatatcttttgttaattgtgcgattttgcaccccctctttttttttaagcgattttgcaccatatctttt 41662197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 246
Target Start/End: Original strand, 23123338 - 23123400
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatattttt 246  Q
    |||||||||||||||||||| | ||||||||| ||||||||||||||| |||||||| |||||    
T  23123338 ggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttacaccccatcttttt 23123400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 75015 - 74936
Alignment:
Q  207 tatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccctttctg 286  Q
    |||||||||| ||||||||||||||||||||| | |||||  || ||| |||||||||||||||||||| |||||||||||    
T  75015 tatcttttgctaattgtgcgattttgcaccccctcttttt-ttttagcgattttgcaccccatctttttgccccctttctg 74936  T

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Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 286
Target Start/End: Original strand, 37752154 - 37752217
Alignment:
Q  224 gcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccctttctg 286  Q
    ||||||||||||||||| |||||  |||||| |||||||||||||||||||| |||||||||||    
T  37752154 gcgattttgcaccccatctttttttttgagcgattttgcaccccatctttttgccccctttctg 37752217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 9623502 - 9623580
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgc 262  Q
    ||||||||||||||||| | |  |||  |||||||||||||||||||||||||||||| ||||||  |||| |||||||    
T  9623502 ggcttaattgcactttttctcactatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgc 9623580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 248
Target Start/End: Complemental strand, 15444703 - 15444637
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaa 248  Q
    |||| |||||||||||||| |||| |||  ||| |||||||||||||||||||||||||| ||||||    
T  15444703 taggtttaattgcactttttccccctataatttaccaattgtgcgattttgcaccccatagttttaa 15444637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 274
Target Start/End: Original strand, 74688 - 74773
Alignment:
Q  186 cttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||||| |  ||||||||| ||||||||||||||||||||| | |||||  || ||| |||||||||| ||||||||    
T  74688 cttaattgcacttttccctcc-atcttttgctaattgtgcgattttgcacccctttttttt--tttagcgattttgcacctcatctttt 74773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 274
Target Start/End: Original strand, 33747981 - 33748073
Alignment:
Q  181 ataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||||||||  || ||||||||||| ||||||| ||||||||| ||  | |||||  |||||| ||||||||||| |||||||    
T  33747981 ataggcttaattgcacttttttcc-atatcttttgctaattgtgtgattttgcatccgctctttttttttgagcgattttgcaccctatctttt 33748073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 9465923 - 9465838
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||| |||| |||  |||||||||  ||||||||||||||||||||| | |||||  |||||| |||||||||||||| ||||    
T  9465923 ttaattgcattttttccc--tatcttttgttaattgtgcgattttgcaccccctctttttttttgagcaattttgcaccccatttttt 9465838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 2856524 - 2856583
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccata 241  Q
    |||||||||||| | |||||| || |||  ||||||||||||||||||||||||||||||    
T  2856524 taggcttaattgtaattttcctccctatagtttgccaattgtgcgattttgcaccccata 2856583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 284
Target Start/End: Original strand, 18019915 - 18020013
Alignment:
Q  189 aattgcacttttcccccatatcttttgcc-aattgtgcgattttgcaccccatat--ttttaattgagctattttgcaccccatctttttccccctttc 284  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||| | |  || |  |||||| ||||||||||||||||||| |||| ||||    
T  18019915 aattgcacttttgccccctatctttttcctaattgtgcgattttgcaccccctcttcttctttttgagcgattttgcaccccatcttttgccccttttc 18020013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 262
Target Start/End: Complemental strand, 25439176 - 25439102
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgc 262  Q
    |||||||||||||| |||| |||  |||| ||||||||||||||||||||||||| ||||||  |||| |||||||    
T  25439176 ttaattgcactttttcccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 25439102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 43162588 - 43162539
Alignment:
Q  188 taattgcacttttcccccatatcttttgccaattgtgcgattttgcacccc 238  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||||||||    
T  43162588 taattgcacttttccccc-tatcttttgtcaatcgtgcgattttgcacccc 43162539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 247 - 312
Target Start/End: Complemental strand, 22851976 - 22851912
Alignment:
Q  247 aattgagctattttgcaccccatctttttccccctttctggtttgaaggccccccatgtgttttag 312  Q
    ||||| || |||||||||| | |||||||||||||||||| |||| ||| ||||||||||||||||    
T  22851976 aattgtgcgattttgcacctcgtctttttccccctttctgatttggagg-cccccatgtgttttag 22851912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 23123567 - 23123517
Alignment:
Q  186 cttaattgcacttttcccccatatcttttgccaattgtgcgattttgcacccc 238  Q
    ||||||||||||||  |||| |||||||||| |||||||||||||||||||||    
T  23123567 cttaattgcacttt--ccccttatcttttgctaattgtgcgattttgcacccc 23123517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 274
Target Start/End: Original strand, 43162234 - 43162325
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcac--cccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||||||||| ||| |||||  ||||||||||||||||||  ||  | |||||  |||||| ||||||||||| |||||||    
T  43162234 ggcttaattgcacttttccccc-tatattttgttaattgtgcgattttgcacctcctctttttttttttgagcgattttgcaccctatctttt 43162325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 7127660 - 7127702
Alignment:
Q  191 ttgcacttttcccccatatcttttgccaattgtgcgattttgca 234  Q
    ||||||||||||||| |||||||||| |||||||||||||||||    
T  7127660 ttgcacttttccccc-tatcttttgctaattgtgcgattttgca 7127702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 273
Target Start/End: Original strand, 9465606 - 9465693
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttt 273  Q
    |||||||||||||||||||| || ||||||||| ||||||||| |||||  ||||| | |||||  || ||| ||||||||||| ||||||    
T  9465606 aggcttaattgcacttttcctcc-tatcttttgtcaattgtgcaattttataccccgtcttttt--tttagcgattttgcaccctatcttt 9465693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 266
Target Start/End: Complemental strand, 11007883 - 11007800
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccc 266  Q
    ||||||||||||||||| ||  | |||||||| ||||||||| |||||||| |||| | |||||  || ||| |||||||||||    
T  11007883 aggcttaattgcactttcccttcttatcttttaccaattgtgagattttgctccccttcttttttttttagcgattttgcaccc 11007800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 22852009 - 22851958
Alignment:
Q  185 gcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcacc 236  Q
    ||||||||| | |||||  || ||||||||||||||||||||||||||||||    
T  22852009 gcttaattgtatttttcatccctatcttttgccaattgtgcgattttgcacc 22851958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 286
Target Start/End: Complemental strand, 33727156 - 33727057
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    |||||| |||||||| ||  |||  ||||| ||||||||||||||||||  |||| ||||||  |||| ||||||| ||| ||  |||||||||||||||    
T  33727156 ttaattacacttttctcctttatagtttgctaattgtgcgattttgcacttcatagttttaaacgagcgattttgccccctatagttttccccctttctg 33727057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 274
Target Start/End: Original strand, 3463634 - 3463729
Alignment:
Q  176 ataatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||| ||||||||||| || ||||||||| |||||||||  |||||||| ||||||||||||| ||||||  || ||| ||||| |||| ||||||||    
T  3463634 ataatttaggcttaattaca-ttttccccc-tatcttttgttaattgtgcaattttgcacccca-attttttttttagcgattttacacctcatctttt 3463729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 286
Target Start/End: Original strand, 16169174 - 16169275
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    ||||||||||||||||||  || |||  |||||||||||||| |||||||||| |||| ||||||  |||| ||||| | ||| ||  ||||| ||||||    
T  16169174 ggcttaattgcacttttcatcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccctatagttttctcccttt 16169272  T
Q  284 ctg 286  Q
    |||    
T  16169273 ctg 16169275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 22786838 - 22786892
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcacc 236  Q
    |||| |||||||||||||| |||| |||||||| | ||||||| |||||||||||    
T  22786838 taggtttaattgcactttttccccctatcttttactaattgtgtgattttgcacc 22786892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 274
Target Start/End: Complemental strand, 766053 - 765999
Alignment:
Q  218 aattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||||||||| | |||||  |||||| ||||||||||| |||||||    
T  766053 aattgtgcgattttgcaccccctcttttt--ttgagcgattttgcaccctatctttt 765999  T

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Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 7127877 - 7127789
Alignment:
Q  189 aattgcacttttcccccatatctttt-gccaattgtgcgattttgcaccccatat--ttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||| |||| |||||||| || ||||| | ||||||||||||||| |  ||||   ||||| |||||||||||||||||||    
T  7127877 aattgcacttttaccccctatctttttgctaattgcgtgattttgcaccccatcttcttttttatgagcgattttgcaccccatctttt 7127789  T

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Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 15156111 - 15156062
Alignment:
Q  189 aattgcacttttcccccatatctttt-gccaattgtgcgattttgcaccc 237  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  15156111 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 15156062  T

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Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 767767 - 767720
Alignment:
Q  176 ataatataggcttaattgcacttttcccccatatcttttgccaattgtg 224  Q
    |||| ||||||||||||||||||||||||| |||||||||  |||||||    
T  767767 ataacataggcttaattgcacttttccccc-tatcttttgttaattgtg 767720  T

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Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 37752242 - 37752290
Alignment:
Q  189 aattgcacttttcccccatatctttt-gccaattgtgcgattttgcacc 236  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  37752242 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 37752290  T

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Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 178 - 312
Target Start/End: Complemental strand, 18817671 - 18817537
Alignment:
Q  178 aatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcc 277  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||  |||| ||||||||||||||||||||||    
T  18817671 aatattggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcc 18817572  T
Q  278 ccctttctggtttgaaggccccccatgtgttttag 312  Q
    ||||||||| |||| || |||||||||||||||||    
T  18817571 ccctttctgatttggagaccccccatgtgttttag 18817537  T

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Target: chr5; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 183 - 312
Target Start/End: Original strand, 11350807 - 11350935
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||| ||||||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  11350807 aggcttaattgcatttttcacccctatcttttgccaattgtgc-attttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctt 11350905  T
Q  283 tctggtttgaaggccccccatgtgttttag 312  Q
    | || |||| ||||||||||||||||||||    
T  11350906 tttgatttggaggccccccatgtgttttag 11350935  T

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Target: chr5; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 182 - 312
Target Start/End: Original strand, 18816950 - 18817080
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||| |||||||  |||| |||||||| |||||||||||||||||    
T  18816950 taggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcatcccatctttttccccct 18817049  T
Q  282 ttctggtttgaaggccccccatgtgttttag 312  Q
    ||||| |||| |||||||||| || ||||||    
T  18817050 ttctgatttggaggccccccacgtattttag 18817080  T

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Target: chr5; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 184 - 286
Target Start/End: Original strand, 18433015 - 18433118
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccctt 282  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||  |||||| |||||||||||||||||||| |||||||    
T  18433015 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttttgccccctt 18433114  T
Q  283 tctg 286  Q
    ||||    
T  18433115 tctg 18433118  T

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Target: chr5; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 182 - 312
Target Start/End: Complemental strand, 11351483 - 11351355
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||| ||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||  |||| ||||| ||||||||| ||||||||||    
T  11351483 taggtttaattgcacttttcactcctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgattttacaccccatc-ttttccccct 11351385  T
Q  282 ttctggtttgaaggccccccatgtgttttag 312  Q
    || || |||| ||| ||||||||||||||||    
T  11351384 ttatgatttggagg-cccccatgtgttttag 11351355  T

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Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 182 - 286
Target Start/End: Original strand, 25115755 - 25115860
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccc 280  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| | |||||  |||||| |||||||||||||||||||| |||||    
T  25115755 taggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccctttttttttttgagcgattttgcaccccatctttttgccccc 25115854  T
Q  281 tttctg 286  Q
    ||||||    
T  25115855 tttctg 25115860  T

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Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 182 - 286
Target Start/End: Original strand, 25174847 - 25174952
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccc 280  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| | |||||  |||||| |||||||||||||||||||| |||||    
T  25174847 taggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccctttttttttttgagcgattttgcaccccatctttttgccccc 25174946  T
Q  281 tttctg 286  Q
    ||||||    
T  25174947 tttctg 25174952  T

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Target: chr5; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 26020449 - 26020553
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccct 281  Q
    |||||||||||||||||||| || |||||||||| ||||||||||||||||||||||| |||||  |||||| |||||||||| ||||||||| ||||||    
T  26020449 aggcttaattgcacttttcctccctatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccgcatctttttgccccct 26020548  T
Q  282 ttctg 286  Q
    |||||    
T  26020549 ttctg 26020553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 182 - 286
Target Start/End: Original strand, 12498565 - 12498669
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||||||||    
T  12498565 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 12498664  T
Q  282 ttctg 286  Q
    |||||    
T  12498665 ttctg 12498669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 22428932 - 22429021
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| |||||  |||||| |||||||||||||||||||    
T  22428932 taggcttaattgcactttcccccc-tatcttttgctaattgtgcgattttgcaccccatcttttt--ttgagcaattttgcaccccatctttt 22429021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 12498984 - 12498880
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||   ||| ||||||| ||| ||  ||||||||||    
T  12498984 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccctatagttttccccct 12498885  T
Q  282 ttctg 286  Q
    |||||    
T  12498884 ttctg 12498880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 274
Target Start/End: Complemental strand, 25175207 - 25175115
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||||||||||||| | |||||  |||||| ||||||||||| |||||||    
T  25175207 taggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 25175115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 26571220 - 26571116
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  |||||| |||    
T  26571220 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcctcct 26571121  T
Q  282 ttctg 286  Q
    |||||    
T  26571120 ttctg 26571116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 183 - 274
Target Start/End: Complemental strand, 18433371 - 18433281
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||||||||||| | |||||  |||||| |||||||||||||||||||    
T  18433371 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctcttttt-tttgagcgattttgcaccccatctttt 18433281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 19515018 - 19514915
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||||| ||||||  ||| |||||||| ||| ||  |||||||||||    
T  19515018 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagttattttgccccctatagttttccccctt 19514919  T
Q  283 tctg 286  Q
    ||||    
T  19514918 tctg 19514915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 185 - 286
Target Start/End: Complemental strand, 22729492 - 22729392
Alignment:
Q  185 gcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttc 284  Q
    ||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  |||||||||||||    
T  22729492 gcttaattgcacttttccccc-tataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 22729394  T
Q  285 tg 286  Q
    ||    
T  22729393 tg 22729392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 34576870 - 34576968
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccctttct 285  Q
    ||||||||||||| ||||| |||||||||| |||||||||||||| |||||||| |||||  |||||| |||||||||||||||||||| ||||||||||    
T  34576870 ttaattgcactttcccccc-tatcttttgctaattgtgcgattttacaccccatcttttt-tttgagcgattttgcaccccatctttttgccccctttct 34576967  T

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Target: chr5; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 21207229 - 21207328
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||| |||||||||    
T  21207229 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcaccctttctg 21207328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 286
Target Start/End: Original strand, 3888239 - 3888341
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    ||||||||||||| |||||||| |||  |||||||||||| ||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||||||||||    
T  3888239 ggcttaattgcacatttcccccctatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 3888338  T
Q  284 ctg 286  Q
    |||    
T  3888339 ctg 3888341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 274
Target Start/End: Complemental strand, 34577217 - 34577129
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||||| |||| |||||||||| ||||||| ||||||||||||||| |||||  |||||| |||||||||||||||||||    
T  34577217 ggcttaattgcactttttcccc-tatcttttgctaattgtgtgattttgcaccccatcttttt-tttgagcgattttgcaccccatctttt 34577129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 286
Target Start/End: Original strand, 26570727 - 26570831
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    ||||||||||| |||||||||||| |||  |||| ||||||||||||||||||||||||| ||||||  |||| ||||||  ||| ||  ||||||||||    
T  26570727 taggcttaattacacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttccccct 26570826  T
Q  282 ttctg 286  Q
    |||||    
T  26570827 ttctg 26570831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 43464247 - 43464144
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||||||||||||||| |||  |||| |||||||||||||||||||| |||| ||||||  |||| ||||||| ||| ||  ||||||||||    
T  43464247 taggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttccccct 43464149  T
Q  282 ttctg 286  Q
    |||||    
T  43464148 ttctg 43464144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 286
Target Start/End: Complemental strand, 3888713 - 3888614
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    ||||||||||||||||| | |||  |||||||||||| ||||||||||||||||| ||||||  |||| ||||||| ||| ||  |||||||||||||||    
T  3888713 ttaattgcacttttccctcttataatttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 3888614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 286
Target Start/End: Original strand, 19514525 - 19514628
Alignment:
Q  184 ggcttaattgcacttttccccca-tatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    |||||||||||||||| |||||  |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  |||||||||||    
T  19514525 ggcttaattgcactttcccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 19514624  T
Q  283 tctg 286  Q
    ||||    
T  19514625 tctg 19514628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 274
Target Start/End: Complemental strand, 25116117 - 25116023
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgca--ccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||||||  |||| | |||||  |||||| ||||||||||| |||||||    
T  25116117 taggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccccttctttttttttgagcgattttgcaccctatctttt 25116023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 263
Target Start/End: Complemental strand, 5187886 - 5187805
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgca 263  Q
    ||||||||||||||||||| |||| |||||||||  |||||||| |||||||||||| |||||||  |||||| ||||||||    
T  5187886 taggcttaattgcacttttgccccttatcttttgttaattgtgcaattttgcaccccctatttttttttgagcgattttgca 5187805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 279
Target Start/End: Original strand, 2817152 - 2817244
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccc 279  Q
    |||||||||||||||| || |||  ||||||||||||||||||||||| |||||| ||||||  |||| ||||||| ||| || |||||||||    
T  2817152 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccataattttaaacgagcgattttgccccctatatttttcccc 2817244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 22429251 - 22429188
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatattttt 246  Q
    |||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||| |||||    
T  22429251 taggcttaattgcatttttccccc-tatcttttgctaattgtgcgattttgcaccccatcttttt 22429188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 37610196 - 37610279
Alignment:
Q  178 aatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgc 262  Q
    |||| ||||||||||||||||||||||| |||  ||||||||||||| |||||||||||||||| ||||||  |||| |||||||    
T  37610196 aataaaggcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgc 37610279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 37780314 - 37780397
Alignment:
Q  178 aatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgc 262  Q
    |||| ||||||||||||||||||||||| |||  ||||||||||||| |||||||||||||||| ||||||  |||| |||||||    
T  37780314 aataaaggcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgc 37780397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 16466798 - 16466708
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt 275  Q
    |||||||||||||||||||||||| ||| |||||| ||||||||||||||||| |    | ||||  |||||| ||||||||||||||||||||    
T  16466798 taggcttaattgcacttttcccccctatattttgctaattgtgcgattttgcatc---aacttttttttgagcgattttgcaccccatcttttt 16466708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 31569904 - 31569970
Alignment:
Q  181 ataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaa 248  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||| ||| |||||||    
T  31569904 ataggtttaattgcacttttccccc-tatcttttgtcaattgtgcgattttgcacctcatgtttttaa 31569970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 34147565 - 34147462
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    |||||||||||||||||| |||| |||  |||| |||||||||||||||||||| | || ||||||  |||| ||||||| ||| ||  |||||||||||    
T  34147565 aggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacctcgtagttttaaacgagcgattttgccccctatagttttccccctt 34147466  T
Q  283 tctg 286  Q
    ||||    
T  34147465 tctg 34147462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 42919304 - 42919406
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    |||||||||||| ||||| |||| ||| |||| |||||||||||||||| |||| ||| |||||||  |||| ||||||||||| ||| |||| ||||||    
T  42919304 aggcttaattgctctttttcccc-tatatttttccaattgtgcgatttttcaccacatgtttttaaacgagcgattttgcaccctatcatttttcccctt 42919402  T
Q  283 tctg 286  Q
    ||||    
T  42919403 tctg 42919406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 43463759 - 43463857
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    ||||||||||||||||||  |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||| |||||||||    
T  43463759 ttaattgcacttttcccct-tatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctccctttctg 43463857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 274
Target Start/End: Complemental strand, 9665879 - 9665792
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||| |||||||||||| |||||||||| |||||||| |||||||||||  |||||||  |||||| |||||||||||||||||||    
T  9665879 ggcttaattccacttttccccc-tatcttttgctaattgtgc-attttgcacccactatttttt-ttgagcgattttgcaccccatctttt 9665792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 286
Target Start/End: Complemental strand, 11317000 - 11316926
Alignment:
Q  212 tttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    |||||||||||||||||||||||||||||  |||||| ||||| ||||||| ||| ||  ||||||| |||||||    
T  11317000 tttgccaattgtgcgattttgcaccccattgttttaaatgagcgattttgccccctatagttttccctctttctg 11316926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 16726084 - 16726130
Alignment:
Q  190 attgcacttttcccccatatcttttgccaattgtgcgattttgcacc 236  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||    
T  16726084 attgcacttttgccccctatcttttgccaattgtgcgattttgcacc 16726130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 248
Target Start/End: Complemental strand, 10099007 - 10098931
Alignment:
Q  171 catatataatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaa 248  Q
    ||||||||  ||||| |||||||||||||||| || |||  |||| ||||||||||||||||||||||||| ||||||    
T  10099007 catatatataataggtttaattgcacttttcctcc-tatagtttgtcaattgtgcgattttgcaccccatagttttaa 10098931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 187 - 246
Target Start/End: Original strand, 9665560 - 9665617
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatattttt 246  Q
    ||||||||||||||||||  |||||||||| |||||||| |||||||||||||| |||||    
T  9665560 ttaattgcacttttcccc--tatcttttgctaattgtgcaattttgcaccccatcttttt 9665617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 33324894 - 33324838
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcacccc 238  Q
    |||||||||||||||||||  ||| ||||||||| |||||||| |||||||||||||    
T  33324894 taggcttaattgcacttttttcccctatcttttgtcaattgtgtgattttgcacccc 33324838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 34147140 - 34147241
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    |||||||||||||||||||||  |||  || |  |||||||||||||||||||||| || ||||||  |||| ||||||| ||| ||  |||||||||||    
T  34147140 aggcttaattgcacttttcccttatagtttat--caattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctatagttttccccctt 34147237  T
Q  283 tctg 286  Q
    ||||    
T  34147238 tctg 34147241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 25940520 - 25940623
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||| ||||  ||| |||  |||| ||||||||||||||||||||| ||| ||||||  |||| ||||||| ||| ||  ||||| |||||    
T  25940520 aggcttaattgcatttttttcccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttcaccctt 25940619  T
Q  283 tctg 286  Q
    ||||    
T  25940620 tctg 25940623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 41383221 - 41383167
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcacccc 238  Q
    ||||||||||| ||||||||||| ||| |||||| |||||||||||||||||||||    
T  41383221 aggcttaattgaacttttccccc-tattttttgctaattgtgcgattttgcacccc 41383167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 286
Target Start/End: Original strand, 22729008 - 22729108
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||||||| |||  ||||  ||||||||||||||||||  |||| ||||||  |||| ||||||| ||| ||  ||||||||||||    
T  22729008 ggcttaattgcacttttccccc-tatagtttgtaaattgtgcgattttgcacttcatagttttaaacgagcgattttgc-ccctatagttttcccccttt 22729105  T
Q  284 ctg 286  Q
    |||    
T  22729106 ctg 22729108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 23011079 - 23011170
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcacc--ccatatttttaattgagctattttgcaccccatcttttt 275  Q
    |||||||||||| ||||||||  |||||||||| |||||||||||||||||||  |||| |||||  |||||  |||||||||||||| |||||    
T  23011079 ggcttaattgcatttttcccct-tatcttttgctaattgtgcgattttgcacccaccat-tttttttttgagagattttgcaccccattttttt 23011170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 37780796 - 37780718
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgc 262  Q
    |||||||||| ||||||||||| |||  ||||| ||||||||||||||||||| |||  ||||||  |||| |||||||    
T  37780796 ggcttaattgtacttttcccccctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttgc 37780718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 10098514 - 10098597
Alignment:
Q  179 atataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgc 262  Q
    |||| ||||||||||||||||| || | |||  |||| |||||||||||||||||| || ||| ||||||  |||| |||||||    
T  10098514 atattggcttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcatcctatagttttaaacgagcgattttgc 10098597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 282
Target Start/End: Original strand, 11316717 - 11316812
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||||||| | |||  |||||||||||| | |||||||| || ||| ||||||  |||| ||||||| ||| ||  |||||||||||    
T  11316717 ttaattgcacttttccctcctatagtttgccaattgtacaattttgcatcctataattttaaacgagcaattttgccccctatagttttccccctt 11316812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 230
Target Start/End: Complemental strand, 12441364 - 12441320
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattt 230  Q
    |||||||||||||||||||||  |||||||||| |||||||||||||    
T  12441364 ggcttaattgcacttttcccc--tatcttttgctaattgtgcgattt 12441320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 280
Target Start/End: Complemental strand, 25941067 - 25940972
Alignment:
Q  185 gcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccc 280  Q
    ||||||||||||||||||| | |||  ||||  |||| |||||||||||| |||||| ||||||  |||| ||||||| ||| ||  |||||||||    
T  25941067 gcttaattgcacttttccctcctatagtttgttaattatgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccc 25940972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 285
Target Start/End: Complemental strand, 41072269 - 41072167
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||| |||||| ||||||||| || |||  |||| ||||||| ||||||||||||| ||| ||||||  |||| ||||||| ||| ||  ||||||||||    
T  41072269 taggtttaattacacttttcctcc-tatagtttgtcaattgtacgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccct 41072171  T
Q  282 ttct 285  Q
    ||||    
T  41072170 ttct 41072167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 237
Target Start/End: Original strand, 41382891 - 41382945
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccc 237  Q
    |||| ||||||||| ||||||||| |||||||||  ||||||||||||||||||||    
T  41382891 taggtttaattgca-ttttcccccctatcttttgttaattgtgcgattttgcaccc 41382945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 267
Target Start/End: Original strand, 9869563 - 9869639
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcacccc 267  Q
    |||||||||||||||| || |||  ||||| ||||||||||||||||||||  | |||||  |||||| ||||||||||||    
T  9869563 ttaattgcacttttcctccctat--tttgctaattgtgcgattttgcacccacttttttt--ttgagcgattttgcacccc 9869639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 284
Target Start/End: Complemental strand, 9869790 - 9869688
Alignment:
Q  187 ttaattgcacttttcccccatatcttttg-ccaattgtgcgattttgcaccccat----atttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||||| |||| | ||||||  ||||||||||||||||||||||| |     |||||  || ||| ||||||||||||||| ||| ||||||    
T  9869790 ttaattgcacttttgccccctgtctttttaccaattgtgcgattttgcaccccctcttctttttttttttagcgattttgcaccccatcatttgccccct 9869691  T
Q  282 ttc 284  Q
    |||    
T  9869690 ttc 9869688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 25115885 - 25115934
Alignment:
Q  189 aattgcacttttcccccatatc-ttttgccaattgtgcgattttgcaccc 237  Q
    |||||||||||| |||| |||| |||||| ||||||||||||||||||||    
T  25115885 aattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 25115934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 25174977 - 25175026
Alignment:
Q  189 aattgcacttttcccccatatc-ttttgccaattgtgcgattttgcaccc 237  Q
    |||||||||||| |||| |||| |||||| ||||||||||||||||||||    
T  25174977 aattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 25175026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 34576991 - 34577040
Alignment:
Q  187 ttaattgcacttttcccccatatctttt-gccaattgtgcgattttgcac 235  Q
    |||||||||||||| |||| |||||||| || ||||||||||||||||||    
T  34576991 ttaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 34577040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 262
Target Start/End: Complemental strand, 2817626 - 2817551
Alignment:
Q  186 cttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgc 262  Q
    |||||||||||||||||||| |||  ||||| |||||||||||||| || || ||| ||||||  |||| |||||||    
T  2817626 cttaattgcacttttccccc-tatagtttgcgaattgtgcgattttacatccaatagttttaaacgagcgattttgc 2817551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 18433143 - 18433191
Alignment:
Q  189 aattgcacttttcccccatatctttt-gccaattgtgcgattttgcacc 236  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  18433143 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 18433191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 23011309 - 23011261
Alignment:
Q  187 ttaattgcacttttcccccatatctttt-gccaattgtgcgattttgca 234  Q
    ||||||||| |||| |||| |||||||| ||||||||||||||||||||    
T  23011309 ttaattgcaattttgccccctatcttttagccaattgtgcgattttgca 23011261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 184 - 312
Target Start/End: Complemental strand, 6849 - 6721
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||||||    
T  6849 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 6750  T
Q  284 ctggtttgaaggccccccatgtgttttag 312  Q
    ||| |||| ||||||||||||||||||||    
T  6749 ctgatttggaggccccccatgtgttttag 6721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 312
Target Start/End: Original strand, 6152 - 6279
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||| ||  |||||||||| |||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  6152 ggcttaattgcacttttcacctctatcttttgctaattgtgcgattttacaccccatatttttaaatgagcgattttgcaccccatctttttcccccttt 6251  T
Q  284 ctggtttgaaggccccccatgtgttttag 312  Q
    ||| |||| ||| ||||||||||||||||    
T  6252 ctgatttggagg-cccccatgtgttttag 6279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 4e-44; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 178 - 304
Target Start/End: Original strand, 49284403 - 49284529
Alignment:
Q  178 aatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcc 277  Q
    |||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||  |||| ||||||||||||||||||||||    
T  49284403 aataaaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcc 49284502  T
Q  278 ccctttctggtttgaaggccccccatg 304  Q
    ||||||||| |||| ||||||||||||    
T  49284503 ccctttctgatttggaggccccccatg 49284529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 6002237 - 6002357
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||| ||| ||||||||| |||||||| ||||||||||||||| |||||||  |||| ||||||||||||||||||||||||||||    
T  6002237 ggcttaattgcacttttcacccctatcttttgtcaattgtgtgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 6002336  T
Q  284 ctggtttgaaggccccccatg 304  Q
    ||| |||| ||||||||||||    
T  6002337 ctgatttggaggccccccatg 6002357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 205 - 312
Target Start/End: Complemental strand, 49285088 - 49284981
Alignment:
Q  205 catatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctggtttgaaggccccccatg 304  Q
    |||||||||||||||||||||||||||||||||||| |||||||   ||| ||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  49285088 catatcttttgccaattgtgcgattttgcaccccatgtttttaaacaagcgattttgcaccccatctttttccccctttctgatttggaggccccccatg 49284989  T
Q  305 tgttttag 312  Q
    ||||||||    
T  49284988 tgttttag 49284981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 47955305 - 47955409
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccct 281  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||  |||||| |||||||||||||||||||| ||||||    
T  47955305 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccct 47955404  T
Q  282 ttctg 286  Q
    |||||    
T  47955405 ttctg 47955409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 186 - 312
Target Start/End: Complemental strand, 6002946 - 6002819
Alignment:
Q  186 cttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttct 285  Q
    ||||||||||||||||  || ||||||||  |||||||||||||||||||||||| |||||||  |||| |||||||||| |||||||||||||||||||    
T  6002946 cttaattgcacttttcatccctatcttttcgcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacctcatctttttccccctttct 6002847  T
Q  286 ggtttgaagg-ccccccatgtgttttag 312  Q
    | |||| ||| |||||||||||||||||    
T  6002846 gatttggaggcccccccatgtgttttag 6002819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 172 - 286
Target Start/End: Original strand, 28633708 - 28633822
Alignment:
Q  172 atatataatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatct 271  Q
    |||||||||||||||||||||||||||||||||| |||  |||||||||||| ||||||||||||||||| ||||||  |||| ||||||| ||| ||      
T  28633708 atatataatataggcttaattgcacttttcccccttatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatag 28633807  T
Q  272 ttttccccctttctg 286  Q
    |||||||||||||||    
T  28633808 ttttccccctttctg 28633822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 174 - 292
Target Start/End: Original strand, 31847885 - 31848003
Alignment:
Q  174 atataatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttt 273  Q
    |||||||| ||| ||||||||||||| ||||| |||||||||| |||||||| |||||||| |||||||||||  |||||| ||||||||||| ||||||    
T  31847885 atataataaaggtttaattgcactttacccccttatcttttgctaattgtgcaattttgcatcccatattttt-tttgagcgattttgcacccgatcttt 31847983  T
Q  274 tt-ccccctttctggtttga 292  Q
    || |||||||||||||||||    
T  31847984 ttgccccctttctggtttga 31848003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 39692055 - 39691952
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||| |||||||  | |  ||||||||||| |||||||||||||||    
T  39692055 aggcttaattgcacttttcccccctatattttgtcaattgtgcgattttgcaccccatgtttttaaacgtgtgattttgcaccctatctttttccccctt 39691956  T
Q  283 tctg 286  Q
    ||||    
T  39691955 tctg 39691952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 184 - 286
Target Start/End: Original strand, 9347126 - 9347228
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||||||||||    
T  9347126 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 9347225  T
Q  284 ctg 286  Q
    |||    
T  9347226 ctg 9347228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 48105170 - 48105068
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||||||||||    
T  48105170 ggcttaattgcacttttcccccttatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 48105071  T
Q  284 ctg 286  Q
    |||    
T  48105070 ctg 48105068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 187 - 286
Target Start/End: Complemental strand, 22149750 - 22149653
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||| | | |||||  || ||| |||||||||||||||||||| ||||||||||    
T  22149750 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacctccttttttt--tttagcgattttgcaccccatctttttgcccctttctg 22149653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 32163099 - 32162995
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||  ||  ||||||||||    
T  32163099 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccttatagttttccccct 32163000  T
Q  282 ttctg 286  Q
    |||||    
T  32162999 ttctg 32162995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 8109048 - 8108985
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatattttt 246  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  8109048 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccatcttttt 8108985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 184 - 286
Target Start/End: Original strand, 27172116 - 27172217
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||||||||||    
T  27172116 ggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 27172214  T
Q  284 ctg 286  Q
    |||    
T  27172215 ctg 27172217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 50615674 - 50615573
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||||||| |||  |||| ||||||||||||||||||||||||| |||||| ||||| ||||||| ||| ||  ||||||||||||    
T  50615674 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttcccccttt 50615576  T
Q  284 ctg 286  Q
    |||    
T  50615575 ctg 50615573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 50623502 - 50623401
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||||||| |||  |||| ||||||||||||||||||||||||| |||||| ||||| ||||||| ||| ||  ||||||||||||    
T  50623502 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttcccccttt 50623404  T
Q  284 ctg 286  Q
    |||    
T  50623403 ctg 50623401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 186 - 286
Target Start/End: Complemental strand, 17518653 - 17518555
Alignment:
Q  186 cttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccctttc 284  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||  |||||| |||||||| ||||||||||| |||||||||    
T  17518653 cttaattgcacttttccccc-tatcttttgccaattgtgcgattttgcaccccctcttttt-tttgagcaattttgca-cccatctttttgccccctttc 17518557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 286
Target Start/End: Complemental strand, 9347610 - 9347503
Alignment:
Q  178 aatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcc 277  Q
    |||||||||||||||||||||| ||||| |||  |||||||||||||| ||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||||    
T  9347610 aatataggcttaattgcactttcccccc-tatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctatagttttcc 9347512  T
Q  278 ccctttctg 286  Q
    |||||||||    
T  9347511 ccctttctg 9347503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 26815175 - 26815071
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||||||||||||||| |||  |||  ||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||||||||    
T  26815175 taggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctataattttccccct 26815076  T
Q  282 ttctg 286  Q
    |||||    
T  26815075 ttctg 26815071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 286
Target Start/End: Original strand, 44911023 - 44911127
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||  ||| ||  |||| ||||||| ||| ||  ||||||||||    
T  44911023 taggcttaattgcactttccccccctatattttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccct 44911122  T
Q  282 ttctg 286  Q
    |||||    
T  44911123 ttctg 44911127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 274
Target Start/End: Complemental strand, 47955664 - 47955572
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||||||||| | |||||  |||||| ||||||||||| |||||||    
T  47955664 taggcttaattgcacttttcccccctatcttttattaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 47955572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 186 - 286
Target Start/End: Complemental strand, 50526524 - 50526424
Alignment:
Q  186 cttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttct 285  Q
    ||||||||||||||| |||| |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||||||||||||    
T  50526524 cttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 50526425  T
Q  286 g 286  Q
    |    
T  50526424 g 50526424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 20480167 - 20480269
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  |||||||||||    
T  20480167 aggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 20480265  T
Q  283 tctg 286  Q
    ||||    
T  20480266 tctg 20480269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 175 - 286
Target Start/End: Complemental strand, 28634220 - 28634109
Alignment:
Q  175 tataatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||| |||||| ||||||||||||||||||| |||  |||| ||||||||||||||||||||||||| ||||||  || | ||||||| ||| ||  |||    
T  28634220 tatattataggtttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctatagttt 28634121  T
Q  275 tccccctttctg 286  Q
    ||||||||||||    
T  28634120 tccccctttctg 28634109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 184 - 286
Target Start/End: Original strand, 41082909 - 41083011
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccctt 282  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||||||| ||| | |||||  || ||| |||||||||||||||||||| |||||||    
T  41082909 ggcttaattgtactttttccccctatcttttgccaattgtgcgattttgcatcccctcttttt-ttttagcgattttgcaccccatctttttgccccctt 41083007  T
Q  283 tctg 286  Q
    ||||    
T  41083008 tctg 41083011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 46823846 - 46823945
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||||| ||||| ||||||  |||| ||||||| ||| ||  |||||||||||||||    
T  46823846 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctatagttttccccctttctg 46823945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 48104681 - 48104780
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    ||||||||||||||||||| |||  |||| ||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  |||||||||||||||    
T  48104681 ttaattgcacttttcccccctatagtttggcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 48104780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 187 - 286
Target Start/End: Complemental strand, 50430132 - 50430033
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||| |||||||||    
T  50430132 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctccctttctg 50430033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 286
Target Start/End: Original strand, 13918446 - 13918548
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    ||||||||||||||||| || | |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||||||||||    
T  13918446 ggcttaattgcactttttcctcctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 13918545  T
Q  284 ctg 286  Q
    |||    
T  13918546 ctg 13918548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 286
Target Start/End: Original strand, 26814694 - 26814796
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    ||||||||||||||||||| || |||  |||| ||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||||||||||    
T  26814694 ggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 26814793  T
Q  284 ctg 286  Q
    |||    
T  26814794 ctg 26814796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 246
Target Start/End: Original strand, 48190771 - 48190833
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatattttt 246  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||    
T  48190771 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatcttttt 48190833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 286
Target Start/End: Complemental strand, 999581 - 999477
Alignment:
Q  181 ataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccc 280  Q
    ||||||||||||||||||||||||| |||   |||||||||||||||||||||| |||||| ||||||  |||| ||||||| ||| ||  |||||||||    
T  999581 ataggcttaattgcacttttccccc-tatagattgccaattgtgcgattttgcaacccatagttttaaacgagcgattttgccccctatagttttccccc 999483  T
Q  281 tttctg 286  Q
    ||||||    
T  999482 tttctg 999477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 48191412 - 48191348
Alignment:
Q  181 ataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttt 245  Q
    ||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||| ||||    
T  48191412 ataggcttaattgcacttttcacccctatcttttgccaatggtgcgattttgcaccccatctttt 48191348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 274
Target Start/End: Complemental strand, 31848250 - 31848158
Alignment:
Q  180 tataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||||||||| ||| |||||||||  |||||| |||||||||||||| | |||||  | |||| |||||||||||||||||||    
T  31848250 tataggcttaattgcacttttctcccctatcttttgttaattgtacgattttgcaccccctcttttt--tcgagcgattttgcaccccatctttt 31848158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 42611188 - 42611287
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||||||| |||| ||||||  |||| |||||||  || ||  |||||||||||||||    
T  42611188 ttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgcctcctatagttttccccctttctg 42611287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 183 - 268
Target Start/End: Complemental strand, 13589713 - 13589628
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccat-atttttaattgagctattttgcacccca 268  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |  |||||  |||||| |||||||||||||    
T  13589713 aggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcaccccctcttttttttttgagcgattttgcacccca 13589628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 182 - 292
Target Start/End: Complemental strand, 19008806 - 19008696
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||||||||||||||| |||  |||  ||||||||||||||||||||||||| ||| ||  | || ||||||| ||| ||  ||||||||||    
T  19008806 taggcttaattgcacttttcccccctatagtttcgcaattgtgcgattttgcaccccatagtttaaaacgtgcaattttgccccctataattttccccct 19008707  T
Q  282 ttctggtttga 292  Q
    ||||| |||||    
T  19008706 ttctgatttga 19008696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 279
Target Start/End: Original strand, 1176839 - 1176932
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattg-agctattttgcaccccatctttttcccc 279  Q
    |||||||||||||| |||| ||||||||| ||||||||| |||||||||||| | |||||  ||| ||| ||||||||||||||||||| ||||    
T  1176839 ttaattgcacttttaccccctatcttttgtcaattgtgcaattttgcaccccctctttttttttgtagcgattttgcaccccatcttttgcccc 1176932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 274
Target Start/End: Original strand, 8108718 - 8108810
Alignment:
Q  181 ataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||| |||||||||||||||| || |||||||||  ||||||||||||||||||||| | |||||  |||||| ||||||||||| |||||||    
T  8108718 ataggtttaattgcacttttcctccctatcttttgttaattgtgcgattttgcaccccct-tttttttttgagcgattttgcaccctatctttt 8108810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 274
Target Start/End: Original strand, 22149396 - 22149490
Alignment:
Q  177 taatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||| ||||||||||||||||||||||| |||| ||||  ||||||||||||||||||||| | |||||  |||||| |||||||||||||||||||    
T  22149396 taataaaggcttaattgcacttttccccc-tatc-tttggtaattgtgcgattttgcaccccctcttttt-tttgagcgattttgcaccccatctttt 22149490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 6703954 - 6703870
Alignment:
Q  178 aatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgc 262  Q
    ||||| |||||||||||||||||| ||| |||  |||||||||||||| ||||||||||||||| ||||||  |||| |||||||    
T  6703954 aatattggcttaattgcacttttctcccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgc 6703870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 17518301 - 17518392
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||| |||||||  |||||||||  ||||||||||||||||||||| | |||||  |||||| ||||||||||| |||||||    
T  17518301 taggcttaattgcacctttcccct-tatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 17518392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 46824333 - 46824233
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    |||||||||||||||||| || | |||  |||||||||||||| ||||||||||||||| ||||||  |||| ||||||| ||| ||  |||||||||||    
T  46824333 aggcttaattgcactttttcctcctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 46824234  T
Q  283 t 283  Q
    |    
T  46824233 t 46824233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 20371406 - 20371304
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgca-ccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    |||||||||||||||||||||| |||  ||||||||||||||||||||||| ||||||| ||||||  |||| ||||||| ||| ||  ||| |||||||    
T  20371406 ggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccctatagtttaccccctt 20371308  T
Q  283 tctg 286  Q
    ||||    
T  20371307 tctg 20371304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 27172596 - 27172494
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||||||||||||| | |  ||||||||||||||||||||||| |||||  ||||||  |||| ||||||| ||| ||  |||||||||||    
T  27172596 aggcttaattgcacttttcccccctgtactttgccaattgtgcgattttgcatcccattgttttaaacgagcgattttgc-ccctatagttttccccctt 27172498  T
Q  283 tctg 286  Q
    ||||    
T  27172497 tctg 27172494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 286
Target Start/End: Original strand, 21687025 - 21687127
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||||||| |||  |||| ||||||||  ||||||||||||||| ||||||  |||| ||||||| ||| ||  |||||| |||||    
T  21687025 ggcttaattgcacttttcccccctatagtttgtcaattgtgtaattttgcaccccatagttttaaacgagcgattttgccccctatagttttcctccttt 21687124  T
Q  284 ctg 286  Q
    |||    
T  21687125 ctg 21687127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 286
Target Start/End: Original strand, 49317752 - 49317853
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||||||| |||  |||||||||||||| |||||||| |||||| ||||||  |||| ||||| | ||| ||  ||||||||||||    
T  49317752 ggcttaattgcacttttccccc-tatagtttgccaattgtgcaattttgcatcccatagttttaaacgagcgattttaccccctatagttttcccccttt 49317850  T
Q  284 ctg 286  Q
    |||    
T  49317851 ctg 49317853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 49318219 - 49318118
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||| ||||| |||  ||||||||||||||||||||||| |||||| ||| ||  |||| ||||||| ||| ||  ||||||||||||    
T  49318219 ggcttaattgcactttcccccc-tatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctatagttttcccccttt 49318121  T
Q  284 ctg 286  Q
    |||    
T  49318120 ctg 49318118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 4692488 - 4692423
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaa 248  Q
    |||||||||||||||||| |||| |||  |||||||||||||| ||||||||||||||| ||||||    
T  4692488 aggcttaattgcactttttccccctatagtttgccaattgtgcaattttgcaccccatagttttaa 4692423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 286
Target Start/End: Original strand, 6703458 - 6703562
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    ||||||||||||||||||| || | |||  ||| ||||||||||||||||||||| |||| ||||||  |||| ||||||| ||| ||  |||||||| |    
T  6703458 taggcttaattgcactttttcctcctatagtttaccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcccctt 6703557  T
Q  282 ttctg 286  Q
    |||||    
T  6703558 ttctg 6703562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 20480665 - 20480602
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaa 248  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||||||| ||| ||||||    
T  20480665 ggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcaccctatagttttaa 20480602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 312
Target Start/End: Complemental strand, 48191366 - 48191311
Alignment:
Q  256 attttgcaccccatctttttccccctttctggtttgaaggccccccatgtgttttag 312  Q
    ||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  48191366 attttgcaccccatctttt-ccccctttctgatttggaggccccccatgtgttttag 48191311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 13918920 - 13918857
Alignment:
Q  185 gcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaa 248  Q
    |||||||||||||||||| || |||  ||||||||||||||||||||||||| |||| ||||||    
T  13918920 gcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacctcatagttttaa 13918857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 266
Target Start/End: Original strand, 24671283 - 24671338
Alignment:
Q  211 ttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccc 266  Q
    ||||||||||||||||||||||||| ||||  |||||||||||| |||||||||||    
T  24671283 ttttgccaattgtgcgattttgcactccatccttttaattgagcgattttgcaccc 24671338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 41083269 - 41083211
Alignment:
Q  179 atataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcacccc 238  Q
    ||||||||||||||||||||||||||| |||||||||  | |||||||||||||||||||    
T  41083269 atataggcttaattgcacttttccccc-tatcttttgttagttgtgcgattttgcacccc 41083211  T

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Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 304
Target Start/End: Original strand, 48190805 - 48190862
Alignment:
Q  247 aattgagctattttgcaccccatctttttccccctttctggtttgaaggccccccatg 304  Q
    ||||| || ||||||||||||||||||||||||||||||  |||| ||||||||||||    
T  48190805 aattgtgcgattttgcaccccatctttttccccctttctaatttggaggccccccatg 48190862  T

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Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 262
Target Start/End: Original strand, 999115 - 999189
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgc 262  Q
    ||||||||||||||||||| |||  |||| |||||||||||||||||| |||||| ||||||  |||| |||||||    
T  999115 ttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgc 999189  T

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Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 237
Target Start/End: Original strand, 39690792 - 39690847
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccc 237  Q
    |||||||| |||||||||| |||| ||| ||| |||||||||||||||||||||||    
T  39690792 taggcttagttgcactttttccccctatatttggccaattgtgcgattttgcaccc 39690847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 286
Target Start/End: Complemental strand, 42611665 - 42611566
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    ||||||||||||||| ||| |||  |||| |||||||||||||||||||| |||| ||||||   ||| ||||||| ||| ||  |||| ||||||||||    
T  42611665 ttaattgcacttttctcccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacaagcgattttgccccctatagtttttcccctttctg 42611566  T

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Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 50429655 - 50429734
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgc 262  Q
    ||||||||||| ||||||||||  |||  ||||| ||||||||||||||||||| |||| ||||||  |||| |||||||    
T  50429655 aggcttaattgtacttttcccctttataatttgctaattgtgcgattttgcacctcatagttttaaacgagcgattttgc 50429734  T

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Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 50615239 - 50615289
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgc 233  Q
    ||||||||||||||||||||||| |||  |||| |||||||||||||||||    
T  50615239 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50615289  T

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Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 50623067 - 50623117
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgc 233  Q
    ||||||||||||||||||||||| |||  |||| |||||||||||||||||    
T  50623067 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50623117  T

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Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 1177079 - 1177018
Alignment:
Q  177 taatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcacccc 238  Q
    |||| |||| |||||||||||||||| || ||||||| || |||||||| ||||||||||||    
T  1177079 taatctaggtttaattgcacttttcctccctatctttcgctaattgtgcaattttgcacccc 1177018  T

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Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 1176717 - 1176805
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt 275  Q
    |||||||||||||||| ||||| ||| |||||| ||||||||||||||||| |||   |||||  || ||| ||||||||||| ||||||||    
T  1176717 ggcttaattgcactttcccccc-tatattttgctaattgtgcgattttgcatccctctttttt--tttagcgattttgcaccctatcttttt 1176805  T

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Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 20371039 - 20371116
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgc 262  Q
    ||||||||||||||||| |||| |||   |||| ||||||||| ||||||||||||||| ||||||  |||| |||||||    
T  20371039 aggcttaattgcactttccccctatag--tttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgc 20371116  T

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Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 21687520 - 21687457
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaa 248  Q
    |||||||| ||||||||||||| |||  ||||||||||||||||||||| ||| |||| ||||||    
T  21687520 ggcttaatagcacttttccccc-tataatttgccaattgtgcgattttgtacctcatagttttaa 21687457  T

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Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 31848019 - 31848119
Alignment:
Q  187 ttaattgcacttttcccccatatctttt-gccaattgtgcgattttgca-ccccatatttttaattgagctattttgcaccccatctttttccccctttc 284  Q
    |||||||||||||| |||  |||||||| |||||||||||||||||||| |||  |  ||||  |||||| |||||||||||||| |||| |||| ||||    
T  31848019 ttaattgcacttttgccctctatctttttgccaattgtgcgattttgcatccctcttcttttttttgagcgattttgcaccccatgttttgccccatttc 31848118  T
Q  285 t 285  Q
    |    
T  31848119 t 31848119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 33085670 - 33085771
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||| |||||||| || ||| ||||| |||||||  |||||||||||||  || |||||  || | |||||||||| |||| |||||| ||||    
T  33085670 aggcttaattgtacttttccaccctatattttgtcaattgtttgattttgcacccc--atgtttaaacgaacgattttgcacctcatccttttcctcctt 33085767  T
Q  283 tctg 286  Q
    ||||    
T  33085768 tctg 33085771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 44911493 - 44911389
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||| ||||||||| |||| |||| |||  |||||||||||||||||||||||||| ||  ||| ||  |||| ||||||| ||| ||  |||||| |||    
T  44911493 taggtttaattgcattttttccccctatagtttgccaattgtgcgattttgcaccctattgtttaaaacgagcgattttgccccctatagttttcctcct 44911394  T
Q  282 ttctg 286  Q
    |||||    
T  44911393 ttctg 44911389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 19007734 - 19007796
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatattttt 246  Q
    ||||||||||||||||| ||||| |||  |||||||||||||||||||||| ||| ||| ||||    
T  19007734 aggcttaattgcactttcccccc-tatagtttgccaattgtgcgattttgccccctatagtttt 19007796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 279
Target Start/End: Original strand, 46056904 - 46056991
Alignment:
Q  185 gcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccc 279  Q
    ||||||||||||||| ||||  |||||||||| |||| ||||||||||||||     |||||  |||||| ||||||||||| ||||||| ||||    
T  46056904 gcttaattgcactttccccc--tatcttttgctaattttgcgattttgcacc-----tttttttttgagcaattttgcaccctatcttttgcccc 46056991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 47498547 - 47498493
Alignment:
Q  185 gcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccat 240  Q
    ||||||||||||||||||||| |||  |||| |||||||||| |||||||||||||    
T  47498547 gcttaattgcacttttccccc-tatagtttgtcaattgtgcggttttgcaccccat 47498493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 48313847 - 48313792
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcacccc 238  Q
    ||||||||||| |||||| |||  |||||||||| |||||||| ||||||||||||    
T  48313847 aggcttaattgtactttttcccattatcttttgctaattgtgcaattttgcacccc 48313792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 22149630 - 22149580
Alignment:
Q  187 ttaattgcacttttcccccatatctttt-gccaattgtgcgattttgcacc 236  Q
    |||||||||||||| |||| |||||||| || |||||||||||||||||||    
T  22149630 ttaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 22149580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 8108948 - 8108899
Alignment:
Q  189 aattgcacttttcccccatatc-ttttgccaattgtgcgattttgcaccc 237  Q
    |||||||||||| ||||||||| |||||| |||||||||||||| |||||    
T  8108948 aattgcacttttgccccatatctttttgctaattgtgcgattttacaccc 8108899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 17518530 - 17518481
Alignment:
Q  189 aattgcacttttcccccatatctttt-gccaattgtgcgattttgcaccc 237  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  17518530 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 17518481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 47498301 - 47498363
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaa 248  Q
    |||||||||||||||| |||| |||   |||||||||||||| |||||||| |||||| ||||||    
T  47498301 ggcttaattgcactttccccctatag--tttgccaattgtgcaattttgcatcccatagttttaa 47498363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 50949622 - 50949569
Alignment:
Q  181 ataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgca 234  Q
    |||||| |||||||||||| ||||| |||  |||| ||||||||||||||||||    
T  50949622 ataggcataattgcactttccccccctatagtttgtcaattgtgcgattttgca 50949569  T

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Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 32162757 - 32162793
Alignment:
Q  212 tttgccaattgtgcgattttgcaccccatatttttaa 248  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  32162757 tttgccaattgtgcaattttgcaccccatagttttaa 32162793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 49318496 - 49318433
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaa 248  Q
    |||||||||||| ||||||||| |||  |||  |||||||||||||||||| |||||| ||||||    
T  49318496 ggcttaattgcatttttccccc-tatagtttatcaattgtgcgattttgcatcccatagttttaa 49318433  T

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Target: chr3 (Bit Score: 71; Significance: 4e-32; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 182 - 312
Target Start/End: Complemental strand, 1928489 - 1928360
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||| ||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||  |||   |||||||||| ||| |||||||| |    
T  1928489 taggtttaattgca-ttttcctccctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagtggttttgcaccctatccttttcccctt 1928391  T
Q  282 ttctggtttgaaggccccccatgtgttttag 312  Q
    |||||||||||||| ||||||| ||||||||    
T  1928390 ttctggtttgaagggcccccatatgttttag 1928360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 20969073 - 20968971
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccctt 282  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||  |||||| |||||||||||||||||||| |||||||    
T  20969073 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc-tttttttttttgagcgattttgcaccccatctttttgccccctt 20968975  T
Q  283 tctg 286  Q
    ||||    
T  20968974 tctg 20968971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 183 - 289
Target Start/End: Complemental strand, 47871176 - 47871070
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcacccc-atatttttaattgagctattttgcaccccatctttttccccct 281  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |  |||||  |||||| |||||||||||||||||||||||| |    
T  47871176 aggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccccacttttttttttgagcgattttgcaccccatctttttcccctt 47871078  T
Q  282 ttctggtt 289  Q
    ||||||||    
T  47871077 ttctggtt 47871070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 181 - 286
Target Start/End: Original strand, 48159894 - 48159999
Alignment:
Q  181 ataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccc 280  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  |||||||||    
T  48159894 ataggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccc 48159993  T
Q  281 tttctg 286  Q
    ||||||    
T  48159994 tttctg 48159999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 184 - 300
Target Start/End: Original strand, 8314013 - 8314129
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||| ||| ||| ||||| ||||||||||||||||||||| || |||||||  | || ||||||||||| ||| ||||||||||||    
T  8314013 ggcttaattgcacttttctcccctatattttgtcaattgtgcgattttgcacccaatgtttttaaacgtgcgattttgcaccctatcattttcccccttt 8314112  T
Q  284 ctggtttgaaggccccc 300  Q
    ||| ||| | |||||||    
T  8314113 ctgattttatggccccc 8314129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 184 - 286
Target Start/End: Original strand, 10293608 - 10293711
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccctt 282  Q
    |||||||||||| ||||  ||| ||||||||| |||||||||||||||||||||| | |||||  |||||| |||||||||||||||||||| |||||||    
T  10293608 ggcttaattgcatttttttcccctatcttttgtcaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctt 10293707  T
Q  283 tctg 286  Q
    ||||    
T  10293708 tctg 10293711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 184 - 274
Target Start/End: Complemental strand, 18875245 - 18875155
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||||| |||| |||||||||| |||||| |||||||||||||| | |||||  |||||| |||||||||||||||||||    
T  18875245 ggcttaattgcacttttgccccctatcttttgctaattgtacgattttgcaccccctctttttttttgagcgattttgcaccccatctttt 18875155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 10348853 - 10348752
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    ||||||||||||||||| || |||||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||||||||||    
T  10348853 ggcttaattgcactttttcctcatatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 10348754  T
Q  284 ct 285  Q
    ||    
T  10348753 ct 10348752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 20968717 - 20968808
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||| |||||||| |||||||||  ||||||||||||||||||||| | |||||  |||||| ||||||||||| |||||||    
T  20968717 aggcttaattgcacctttcccccctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 20968808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 187 - 286
Target Start/End: Complemental strand, 27238951 - 27238852
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    ||||||||||||||||||  |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  |||||||||||||||    
T  27238951 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctatagttttccccctttctg 27238852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 40848520 - 40848622
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||| ||||||||| ||||||  |||| ||||||| ||| ||  |||||||||||    
T  40848520 aggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctatagttttccccctt 40848618  T
Q  283 tctg 286  Q
    ||||    
T  40848619 tctg 40848622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 53687887 - 53687990
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||||| ||||||  |||| ||||| | ||| ||  |||||||||||    
T  53687887 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccctatagttttccccctt 53687986  T
Q  283 tctg 286  Q
    ||||    
T  53687987 tctg 53687990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 274
Target Start/End: Complemental strand, 10293963 - 10293873
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||||||||| |||||||||  ||||||||||||||||||||| | ||||   |||||| ||||||||||| |||||||    
T  10293963 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctcttttgttttgagcgattttgcaccctatctttt 10293873  T

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Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 42673349 - 42673248
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||||||| |||  |||| ||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||||||||||    
T  42673349 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 42673251  T
Q  284 ctg 286  Q
    |||    
T  42673250 ctg 42673248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 48160387 - 48160285
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||| ||||| |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  |||| |||||||    
T  48160387 ggcttaattgcactttccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttccccttt 48160288  T
Q  284 ctg 286  Q
    |||    
T  48160287 ctg 48160285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 24485513 - 24485413
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||| ||| |||  |||||||||||||||||||||||||||||| |||||| ||||| ||||||| ||| ||  | ||||||||||    
T  24485513 ggcttaattgcacttttctccc-tatagtttgccaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagtattcccccttt 24485415  T
Q  284 ct 285  Q
    ||    
T  24485414 ct 24485413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 286
Target Start/End: Complemental strand, 40849018 - 40848913
Alignment:
Q  181 ataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccc 280  Q
    ||||||||||||||||||||||||  |||  |||||||||||||||||||||||||||||| ||||||   ||| ||||||| ||| ||  ||||| |||    
T  40849018 ataggcttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccctatagttttcaccc 40848919  T
Q  281 tttctg 286  Q
    ||||||    
T  40848918 tttctg 40848913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 286
Target Start/End: Original strand, 27238463 - 27238567
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||| ||||||||| | |||  |||||||||||||||||||||||||| ||| ||||||  |||| ||||||| ||| ||  ||||||||||    
T  27238463 taggcttaattgtacttttccctcctatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccct 27238562  T
Q  282 ttctg 286  Q
    |||||    
T  27238563 ttctg 27238567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 184 - 299
Target Start/End: Original strand, 28702278 - 28702390
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    ||||||||| ||||||| || | ||||||||| ||||| ||||||||||||| |||||||||||||||||  ||||||||| | ||| |||  |||||||    
T  28702278 ggcttaatttcactttttcctc-tatcttttgtcaattatgcgattttgcactccatatttttaattgagtgattttgcacacaatccttt--ccccttt 28702374  T
Q  284 ctggtttgaaggcccc 299  Q
    ||| ||||||||||||    
T  28702375 ctgatttgaaggcccc 28702390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 184 - 300
Target Start/End: Original strand, 42672978 - 42673093
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||  || | ||||||| ||| ||  ||||||||||||    
T  42672978 ggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctatagttttcccccttt 42673076  T
Q  284 ctggtttgaaggccccc 300  Q
     || ||| | |||||||    
T  42673077 atgattttatggccccc 42673093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 181 - 286
Target Start/End: Original strand, 9026733 - 9026835
Alignment:
Q  181 ataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccc 280  Q
    ||||| ||||||||| |||||| || |||||||||  |||||||| |||||||||||| |  ||||  |||||| |||||||||||||||||||||||||    
T  9026733 ataggtttaattgcatttttcctcc-tatcttttgttaattgtgcaattttgcacccctttatttt--ttgagcgattttgcaccccatctttttccccc 9026829  T
Q  281 tttctg 286  Q
    ||||||    
T  9026830 tttctg 9026835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 184 - 274
Target Start/End: Original strand, 17372298 - 17372387
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||| ||| |||| ||| |||||| ||||||||||||||||||||| | |||||  |||||| |||||||||||||||||||    
T  17372298 ggcttaattgcaccttttccccctattttttgctaattgtgcgattttgcaccccctgttttt-tttgagcgattttgcaccccatctttt 17372387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 47666389 - 47666287
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||||||||||| |||  |||||||||||||| ||||||||||||||  ||| ||  |||| ||||||| ||| ||  ||||||||||||    
T  47666389 ggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 47666290  T
Q  284 ctg 286  Q
    |||    
T  47666289 ctg 47666287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 185 - 286
Target Start/End: Original strand, 22429159 - 22429260
Alignment:
Q  185 gcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttc 284  Q
    ||||||||||||||||| ||| ||| ||||||||||||||||| ||||||||| ||| ||||||  |||| ||||||  ||| ||  |||||||||||||    
T  22429159 gcttaattgcacttttctcccctatattttgccaattgtgcgactttgcacccaatagttttaaacgagcgattttgtcccctatagttttccccctttc 22429258  T
Q  285 tg 286  Q
    ||    
T  22429259 tg 22429260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 45060930 - 45060863
Alignment:
Q  179 atataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatattttt 246  Q
    ||||||||||||||||||||||| ||| |||||||||| |||||||||||||| ||||| || |||||    
T  45060930 atataggcttaattgcacttttcacccctatcttttgctaattgtgcgattttacaccctatcttttt 45060863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 246
Target Start/End: Original strand, 1927772 - 1927834
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatattttt 246  Q
    ||||||||||||| |||||||| ||||||||||||||| ||||||||||||||| || |||||    
T  1927772 ggcttaattgcacctttcccccctatcttttgccaattatgcgattttgcaccctatcttttt 1927834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 187 - 279
Target Start/End: Complemental strand, 17372525 - 17372433
Alignment:
Q  187 ttaattgcacttttcccccatatctttt-gccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccc 279  Q
    ||||| |||||||| | || |||||||| |||||||||||||||||||||||| | |||||  |||||| ||||||||||||||||||| ||||    
T  17372525 ttaatggcacttttgcaccctatctttttgccaattgtgcgattttgcaccccctcttttt-tttgagcaattttgcaccccatcttttgcccc 17372433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 21895655 - 21895720
Alignment:
Q  182 taggcttaattgcacttttccccca-tatcttttgccaattgtgcgattttgcaccccatattttt 246  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||| ||||||||||||||| |||||    
T  21895655 taggcttaattgcactttttccccactatgttttgccaattgtgtgattttgcaccccatcttttt 21895720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 3353128 - 3353191
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaa 248  Q
    |||||||||||||||||||||| |||  |||| ||||||||||||||||||||||||| ||||||    
T  3353128 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaa 3353191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 18874879 - 18874935
Alignment:
Q  181 ataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccc 237  Q
    ||||||| |||||||||||| |||| |||||||||| ||||||||||||||||||||    
T  18874879 ataggctcaattgcactttttccccctatcttttgctaattgtgcgattttgcaccc 18874935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 26007176 - 26007259
Alignment:
Q  178 aatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgc 262  Q
    |||| ||||||||||||| ||||||||| |||  |||| ||||||||||||||||||||||||| ||||||  |||| |||||||    
T  26007176 aataaaggcttaattgca-ttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 26007259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 26007675 - 26007571
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||| |||||||||||||| |||| |||  |||||||||||| |||||||||||  |||| ||||||  |||| ||||||| ||| ||  ||||||||||    
T  26007675 taggtttaattgcactttttccccctatagtttgccaattgtacgattttgcacttcataattttaaacgagcgattttgccccctatagttttccccct 26007576  T
Q  282 ttctg 286  Q
    |||||    
T  26007575 ttctg 26007571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 274
Target Start/End: Original strand, 47870820 - 47870910
Alignment:
Q  181 ataggcttaattgcacttttcccccatatcttttgccaattgtgcga-ttttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||||||| |||| |||||||||| |||| ||||| ||||||||||| | |||||   ||||| |||||||||||||||||||    
T  47870820 ataggcttaattgcactttttcccc-tatcttttgctaattatgcgaattttgcacccctttttttt---tgagcgattttgcaccccatctttt 47870910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 274
Target Start/End: Original strand, 13657445 - 13657536
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgca-ccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||| |||||||| |||   | |||||||||||||||||||||||| |||| | |||||  |||||| |||||||||||||||||||    
T  13657445 ggcttaattacacttttctccctatttttttgccaattgtgcgattttgcacccccctctttttttttgagcgattttgcaccccatctttt 13657536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 21896564 - 21896474
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt 275  Q
    |||||||||||| |||| |||| ||| ||||| ||||||||||||||||||||||||  |||||   |||| ||||||||||||||| ||||    
T  21896564 ggcttaattgcattttttcccc-tatattttgtcaattgtgcgattttgcaccccatggttttatacgagcgattttgcaccccatcatttt 21896474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 274
Target Start/End: Complemental strand, 9027086 - 9026998
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||| |||||||||||| |||||||||| |||||||| ||||| |||||| | |||||  |||||  |||||||||||||||||||    
T  9027086 ggcttaatttcacttttccccc-tatcttttgctaattgtgcaattttacaccccttgtttttt-ttgagtgattttgcaccccatctttt 9026998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 312
Target Start/End: Original strand, 10771502 - 10771628
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||||| ||||  ||| ||||||||| |||||||||||||||  || |||| |||||||  |||| ||||| || || ||| ||||  ||||    
T  10771502 taggcttaattgcatttttttccc-tatcttttgtcaattgtgcgattttttactccatgtttttaaccgagcgattttaca-cctatcatttt-tccct 10771598  T
Q  282 ttctggtttgaaggccccccatgtgttttag 312  Q
    |||||||||||||| ||||||||||||||||    
T  10771599 ttctggtttgaagg-cccccatgtgttttag 10771628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 53688356 - 53688255
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    ||||||||||||||||  |||| |||  |||||||||||||||||||||||| ||||| ||| ||  |||| ||||||| ||| ||  ||||||||||||    
T  53688356 ggcttaattgcactttctcccc-tatagtttgccaattgtgcgattttgcactccatagtttaaaacgagcgattttgccccctatagttttcccccttt 53688258  T
Q  284 ctg 286  Q
    |||    
T  53688257 ctg 53688255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 3353607 - 3353527
Alignment:
Q  181 ataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgc 262  Q
    ||||| ||| ||||||||||||||| |||  ||||||||||||||||||||||||| |||| ||||||  |||| |||||||    
T  3353607 ataggtttagttgcacttttccccc-tatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgc 3353527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 279
Target Start/End: Complemental strand, 13657673 - 13657580
Alignment:
Q  187 ttaattgcacttttcccccatatctttt-gccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccc 279  Q
    ||||||||||||||  ||| |||||||| ||||||||||||||||||||||||   | |||  |||||  ||||||||||||||||||| ||||    
T  13657673 ttaattgcacttttgtcccctatctttttgccaattgtgcgattttgcacccctcttctttttttgagaaattttgcaccccatcttttacccc 13657580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 42455788 - 42455853
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatattttta 247  Q
    |||||||||||||||||||||||| |||  |||| ||||||||||||||||| ||| ||| |||||    
T  42455788 taggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgccccctatagtttta 42455853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 53766634 - 53766569
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaa 248  Q
    ||||||||||||||||||||||| |||  ||||| |||||||| ||||||||||| ||| ||||||    
T  53766634 aggcttaattgcacttttcccccctatagtttgcaaattgtgcaattttgcaccctatagttttaa 53766569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 3644837 - 3644781
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccat 240  Q
    |||||||||||| ||||||||| ||| |||||  |||||||||||||||||||||||    
T  3644837 ggcttaattgcatttttcccccttattttttgttaattgtgcgattttgcaccccat 3644781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 285
Target Start/End: Original strand, 4947263 - 4947362
Alignment:
Q  188 taattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccat--atttttaattgagctattttgcaccccatctttttccccctttct 285  Q
    |||||||||||||| ||| ||| |||||  ||||||||||||||||||||  |  ||||||  | |||| |||||||||||||||||||| | |||||||    
T  4947263 taattgcacttttcacccctattttttgttaattgtgcgattttgcaccctctctattttttttcgagcaattttgcaccccatctttttgctcctttct 4947362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 286
Target Start/End: Complemental strand, 22429647 - 22429548
Alignment:
Q  186 cttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttct 285  Q
    |||||||||||||| || || |||  |||| ||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  |||| |||||||||    
T  22429647 cttaattgcactttccctcc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccctttct 22429549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 36180555 - 36180656
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    |||||||||||||| ||||||| |||   |||| |||||||||||||||||| |||||| ||||||  |||| ||||||  ||| ||  |||||||||||    
T  36180555 aggcttaattgcacatttcccctatag--tttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgacccctatagttttccccctt 36180652  T
Q  283 tctg 286  Q
    ||||    
T  36180653 tctg 36180656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 237
Target Start/End: Complemental strand, 1101237 - 1101182
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccc 237  Q
    |||||||||||||||||||||||| ||||||||||   |||||||||||| |||||    
T  1101237 taggcttaattgcacttttcccccttatcttttgctttttgtgcgatttttcaccc 1101182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 237
Target Start/End: Complemental strand, 8315137 - 8315083
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccc 237  Q
    |||||||||||||||||| ||||| ||| ||||| |||||||||||||||||||||    
T  8315137 taggcttaattgcactttcccccc-tatattttgtcaattgtgcgattttgcaccc 8315083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 14016019 - 14015957
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttt 245  Q
    |||| |||||||||||||||  || |||||||||| ||||||||||||||||||||||| ||||    
T  14016019 taggtttaattgcacttttcatcc-tatcttttgctaattgtgcgattttgcaccccatctttt 14015957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 274
Target Start/End: Complemental strand, 26540915 - 26540833
Alignment:
Q  191 ttgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||| |||||||| |||||||||| |||||||||||||| |||  | | |||||  |||||| |||||||||||||||||||    
T  26540915 ttgcacctttccccc-tatcttttgctaattgtgcgattttacacttcctttttttttttgagcgattttgcaccccatctttt 26540833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 262
Target Start/End: Original strand, 53766166 - 53766241
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgc 262  Q
    |||||||||||||| || | |||  |||| ||||||||||||||||||||||||| ||||||  |||| |||||||    
T  53766166 ttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 53766241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 286
Target Start/End: Original strand, 24485049 - 24485123
Alignment:
Q  212 tttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    |||||||||||||||||||||||||||||| ||||||  |||| |||| || ||| ||  |||| ||||||||||    
T  24485049 tttgccaattgtgcgattttgcaccccatagttttaaacgagcgatttcgccccctatagtttttcccctttctg 24485123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 248
Target Start/End: Complemental strand, 36181046 - 36180980
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaa 248  Q
    ||||||||||||||||||||| || |||  ||||  ||||||||||||||| |||||||| ||||||    
T  36181046 taggcttaattgcacttttcctccctatagtttgttaattgtgcgattttgtaccccatagttttaa 36180980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 274
Target Start/End: Complemental strand, 42627599 - 42627511
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||||||| | |||||||||| ||||||| ||||||||| ||| | |||||   ||||| |||||||||||||| ||||    
T  42627599 ggcttaattgcacttttccctc-tatcttttgctaattgtgtgattttgcatccc-tctttttttatgagcgattttgcaccccatttttt 42627511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 47665909 - 47665963
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcacc 236  Q
    ||||||||||||||||||| |||| |||  |||| ||||||||||||||||||||    
T  47665909 taggcttaattgcactttttccccttatagtttgtcaattgtgcgattttgcacc 47665963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 300
Target Start/End: Original strand, 1927815 - 1927858
Alignment:
Q  256 attttgcaccccatctttttccccctttctggtttgaaggccccc 300  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  1927815 attttgcaccctatctttttcccc-tttctggtttgaaggccccc 1927858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 284
Target Start/End: Complemental strand, 14015923 - 14015824
Alignment:
Q  187 ttaattgcactttt-cccccatatctttt-gccaattgtgcgattttgcaccccatatt-tttaattgagctattttgcaccccatctttttcccccttt 283  Q
    |||||||||||||| ||||| |||||||| ||||||||||||||||||||| || | || |||  |||||| |||||||||||| |||||| ||| ||||    
T  14015923 ttaattgcacttttgcccccctatctttttgccaattgtgcgattttgcactccctcttctttttttgagcgattttgcacccc-tcttttgccctcttt 14015825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 45060596 - 45060644
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttg 232  Q
    |||||||||||||||||||||  |||||||||| |||| ||||||||||    
T  45060596 ggcttaattgcacttttccccactatcttttgctaattatgcgattttg 45060644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 1100917 - 1100968
Alignment:
Q  186 cttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccc 237  Q
    ||||||||||||| ||| || |||||||||| |||||||||||||| |||||    
T  1100917 cttaattgcacttatccaccctatcttttgcaaattgtgcgatttttcaccc 1100968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 274
Target Start/End: Complemental strand, 17372645 - 17372560
Alignment:
Q  185 gcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||||||||||||||||||| ||||  ||| | ||||||||||||||||||||| | |||||  || |   |||||||||||||||||||    
T  17372645 gcttaattgcacttttcccctatat--tttactaattgtgcgattttgcacccctttttttt--tttaatgattttgcaccccatctttt 17372560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 262
Target Start/End: Complemental strand, 42456217 - 42456171
Alignment:
Q  216 ccaattgtgcgattttgcaccccatatttttaattgagctattttgc 262  Q
    |||||||||||||||||||||||||| ||||||  |||| |||||||    
T  42456217 ccaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 42456171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 44008454 - 44008353
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    ||||||||||||||||||  || |||  |||||||||||||| |||||||||| |||| ||||||  |||| ||||| | ||| ||  ||||| ||||||    
T  44008454 ggcttaattgcacttttcatcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccctatagttttctcccttt 44008356  T
Q  284 ctg 286  Q
    |||    
T  44008355 ctg 44008353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 286
Target Start/End: Original strand, 10348480 - 10348581
Alignment:
Q  185 gcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttc 284  Q
    ||||||||||||||||| ||| |||  |||| ||||||| | |||||||| |||||| ||||||  |||| ||||||  ||| ||  |||| ||||||||    
T  10348480 gcttaattgcacttttctcccgtatagtttgtcaattgttcaattttgcatcccataattttaaacgagcgattttgtcccctatagtttttcccctttc 10348579  T
Q  285 tg 286  Q
    ||    
T  10348580 tg 10348581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 13657776 - 13657735
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgc 225  Q
    |||||||||||||||||| | |||||||||||| ||||||||    
T  13657776 ggcttaattgcacttttctctcatatcttttgctaattgtgc 13657735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 20968946 - 20968897
Alignment:
Q  189 aattgcacttttcccccatatc-ttttgccaattgtgcgattttgcaccc 237  Q
    |||||||||||| |||| |||| |||||| ||||||||||||||||||||    
T  20968946 aattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 20968897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 1101141 - 1101090
Alignment:
Q  187 ttaattgcacttttcccccatatctttt-gccaattgtgcgattttgcacccc 238  Q
    |||||||||||||| |||| |||||||| | ||||||||||||||||||||||    
T  1101141 ttaattgcacttttgcccc-tatctttttgtcaattgtgcgattttgcacccc 1101090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 17441118 - 17441066
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcac 235  Q
    ||||||||||||| |||||| |  |||||||||  ||||||||||||||||||    
T  17441118 aggcttaattgcatttttcctctctatcttttgttaattgtgcgattttgcac 17441066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 18875017 - 18875065
Alignment:
Q  189 aattgcacttttcccccatatctttt-gccaattgtgcgattttgcacc 236  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  18875017 aattgcacttttgccccctatctttttgctaattgtgcgattttgcacc 18875065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 304
Target Start/End: Original strand, 21895701 - 21895749
Alignment:
Q  256 attttgcaccccatctttttccccctttctggtttgaaggccccccatg 304  Q
    |||||||||||||||||||| |||||||||| ||| | || ||||||||    
T  21895701 attttgcaccccatcttttttcccctttctgattttatggtcccccatg 21895749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 45862 - 45758
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccc 280  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||  |||||| |||||||||||||||||||| |||||    
T  45862 taggcttaattgcacttttccccc-tatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccc 45764  T
Q  281 tttctg 286  Q
    ||||||    
T  45763 tttctg 45758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 45536 - 45626
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||||||||||| |||||||||  |||||||||||||||||| || | |||||  |||||| ||||||||||| |||||||    
T  45536 aggcttaattgcacttttccccc-tatcttttgttaattgtgcgattttgcactccctctttttttttgagcgattttgcaccctatctttt 45626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 1474 - 1371
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccctt 282  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||| | |||||  |||||| |||||||||||||||||||| |||||||    
T  1474 ggcttaattgcactttttccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctt 1375  T
Q  283 tctg 286  Q
    ||||    
T  1374 tctg 1371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 274
Target Start/End: Original strand, 1118 - 1208
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||||| |||| |||||||||  ||||||||||||||||||||| | |||||  |||||| ||||||||||| |||||||    
T  1118 ggcttaattgcactttttccccctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 1208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 1346 - 1297
Alignment:
Q  189 aattgcacttttcccccatatctttt-gccaattgtgcgattttgcaccc 237  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  1346 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 1297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 183 - 280
Target Start/End: Complemental strand, 25424 - 25327
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccc 280  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |||||  |||||| |||||||||||||||||||| ||||    
T  25424 aggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgcccc 25327  T

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Target: scaffold0192; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 25295 - 25247
Alignment:
Q  189 aattgcacttttcccccatatctttt-gccaattgtgcgattttgcacc 236  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  25295 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 25247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 64; Significance: 6e-28; HSPs: 3)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 6750 - 6648
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccctt 282  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |||||  |||||| |||||||||||||||||||| |||||||    
T  6750 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctt 6652  T
Q  283 tctg 286  Q
    ||||    
T  6651 tctg 6648  T

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Target: scaffold0319; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 6393 - 6485
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccat-atttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |  |||||  || ||| |||||||||||||||||||    
T  6393 aggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttttagcgattttgcaccccatctttt 6485  T

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Target: scaffold0319; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 6623 - 6575
Alignment:
Q  189 aattgcacttttcccccatatctttt-gccaattgtgcgattttgcacc 236  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  6623 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 6575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 62; Significance: 9e-27; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 184 - 273
Target Start/End: Original strand, 438930 - 439019
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttt 273  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |||||  |||||| ||||||||||||||||||    
T  438930 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatcttt 439019  T

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Target: scaffold0001; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 182 - 274
Target Start/End: Complemental strand, 439255 - 439165
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||||||| |||| |||||||||| ||||||||||||||||| ||| | |||||  |||||| |||||||||||||||||||    
T  439255 taggcttaattgcactttttccccttatcttttgctaattgtgcgattttgcatcccctcttttt--ttgagcgattttgcaccccatctttt 439165  T

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Target: scaffold0001; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 289
Target Start/End: Complemental strand, 183717 - 183611
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatt-tttaattgagctattttgcaccccatcttttt-ccccc 280  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||| |||||||||| | || |||| |||||| |||||||| ||||||||||| |||||    
T  183717 aggcttaattgcacttttcccccctatattttgctaattgtgcga-tttgcaccccctcttctttatttgagcgattttgca-cccatctttttgccccc 183620  T
Q  281 tttctggtt 289  Q
    ||| |||||    
T  183619 tttatggtt 183611  T

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Target: scaffold0001; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 183367 - 183453
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||||||| ||||||||| ||||||| |||||||||||||  | || ||  |||||| |||||||||| ||| ||||    
T  183367 ttaattgcacttttccccc-tatcttttgtcaattgtacgattttgcaccctctcttcttttttgagcgattttgcacctcatatttt 183453  T

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Target: scaffold0001; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 280
Target Start/End: Complemental strand, 183592 - 183497
Alignment:
Q  187 ttaattgcacttttcccccatatcttttg-ccaattgtgcgattttgcaccccatatt-tttaattgagctattttgcaccccatctttttccccc 280  Q
    |||||||||||||| |||| ||||||||  ||||||||||||||||||| ||| | || |||  |||||| ||||| ||||| ||||||| |||||    
T  183592 ttaattgcacttttgccccctatctttttaccaattgtgcgattttgcaacccgtcttatttttttgagcgatttttcaccctatcttttgccccc 183497  T

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Target: scaffold0535 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 183 - 310
Target Start/End: Original strand, 10011 - 10138
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    |||||||||||||||||| |||| ||||||||||||||||| |||||||||| || ||  |||||||||| | |||||| || |  |||||| |||||||    
T  10011 aggcttaattgcacttttgccccctatcttttgccaattgtacgattttgcatccaatccttttaattgaacgattttgtacactctcttttgccccctt 10110  T
Q  283 tctggtttgaaggccccccatgtgtttt 310  Q
    ||||||| || |||||| ||||||||||    
T  10111 tctggttcgatggcccctcatgtgtttt 10138  T

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Target: scaffold0017 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 185328 - 185226
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 283  Q
    ||||||||||||||||||| || |||  |||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||| ||  ||||||| ||||    
T  185328 ggcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccctcttt 185229  T
Q  284 ctg 286  Q
    |||    
T  185228 ctg 185226  T

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Target: scaffold0017; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 286
Target Start/End: Original strand, 184840 - 184941
Alignment:
Q  185 gcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttc 284  Q
    ||||||||||||||||| ||  |||  |||| ||| ||||| ||||||||||||||| ||||||  |||| |||||||  || ||  |||||||||||||    
T  184840 gcttaattgcacttttctcctctatagtttgtcaactgtgcaattttgcaccccatagttttaaacgagcgattttgccacctatagttttccccctttc 184939  T
Q  285 tg 286  Q
    ||    
T  184940 tg 184941  T

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Target: scaffold0460 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 329 - 432
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    ||||||||||||||||||||||| |||  |||| |||||||||||||||||| |||||| ||||||  |||| ||||||| ||| ||  |||||||| ||    
T  329 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttt 428  T
Q  283 tctg 286  Q
    ||||    
T  429 tctg 432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 816 - 739
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgc 262  Q
    ||||||||||||||||| |||| |||  |||||||||||||||||||||||||||||| ||||||  |||| |||||||    
T  816 ggcttaattgcactttttcccc-tatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttgc 739  T

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Target: scaffold0176 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 20104 - 20033
Alignment:
Q  177 taatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaa 248  Q
    ||||||||||||||||||||||||||||| |||  |||| ||||||||||||||||| ||||||| ||||||    
T  20104 taatataggcttaattgcacttttcccccttatagtttgtcaattgtgcgattttgccccccatagttttaa 20033  T

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Target: scaffold0176; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 262
Target Start/End: Original strand, 19610 - 19698
Alignment:
Q  173 tatataatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgc 262  Q
    |||||| || ||||||||||||| |||||||| ||||  |||||||||||||||||||||||||||||| ||||||  |||| |||||||    
T  19610 tatatattaaaggcttaattgcaattttcccc-atatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 19698  T

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Target: scaffold0041 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 38750 - 38647
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    |||||||||||||||||| |||| |||  |||||||||||||||||||||||||||||| | ||||  || | ||||||| ||| ||  |||||||||||    
T  38750 aggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagtcttaaacgaacgattttgccccctatagttttccccctt 38651  T
Q  283 tctg 286  Q
    ||||    
T  38650 tctg 38647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 38284 - 38353
Alignment:
Q  217 caattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 286  Q
    |||||||||||||||||| |||||| |||||| ||||| ||||||| ||| ||  ||||||| |||||||    
T  38284 caattgtgcgattttgcatcccatagttttaaatgagcgattttgccccctatagttttccctctttctg 38353  T

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Target: scaffold0002 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 286
Target Start/End: Original strand, 411923 - 412024
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatcttttt-ccccctt 282  Q
    |||||||||||||||| ||||| ||||||||| |||||||||||||||||||||| | |||||  || ||| ||||||||||| |||||||| |||||||    
T  411923 ggcttaattgcactttaccccc-tatcttttgtcaattgtgcgattttgcaccccctcttttt-tttaagcgattttgcaccctatctttttgccccctt 412020  T
Q  283 tctg 286  Q
    ||||    
T  412021 tctg 412024  T

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Target: scaffold0029 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 9904 - 10008
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgca-ccccatatttttaattgagctattttgcaccccatctttttccccct 281  Q
    |||||||||||||||||| |||| |||  |||||||||||||||||||| || ||||||| ||||||  |||| ||||||| ||| ||  ||||||||||    
T  9904 aggcttaattgcactttttccccctatagtttgccaattgtgcgatttttcacccccatagttttaaacgagcgattttgccccctatagttttccccct 10003  T
Q  282 ttctg 286  Q
    |||||    
T  10004 ttctg 10008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 10373 - 10311
Alignment:
Q  182 taggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatattttt 246  Q
    |||||||||| |||||||||||| |||   |||||||||||| ||||||||||||| ||| ||||    
T  10373 taggcttaatagcacttttcccctatag--tttgccaattgtccgattttgcaccctatagtttt 10311  T

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Target: scaffold0015 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 274
Target Start/End: Complemental strand, 17214 - 17119
Alignment:
Q  179 atataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcacc-ccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||| |||||||||||||||||||||| |||||||||| |||||||| |||||||||| ||   |||||  |||||| |||||||||||||||||||    
T  17214 atattggcttaattgcacttttccccc-tatcttttgctaattgtgcaattttgcaccgcctcttttttttttgagcgattttgcaccccatctttt 17119  T

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Target: scaffold0015; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 286
Target Start/End: Original strand, 16853 - 16956
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaatt--gagctattttgcaccccatctttttcc-ccc 280  Q
    |||||||||||  ||||||||  |||||||||| |||||||||||| |||||||| | |||||  ||  |||| |||||||||||||||||||||| |||    
T  16853 ggcttaattgcctttttcccc--tatcttttgctaattgtgcgattatgcaccccctctttttttttttgagcgattttgcaccccatctttttcctccc 16950  T
Q  281 tttctg 286  Q
    ||||||    
T  16951 tttctg 16956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 50560 - 50458
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgca-ccccatatttttaattgagctattttgcaccccatctttttccccctt 282  Q
    |||||||||||||||||||||| |||  ||||||||||||||||||||||| ||||||| ||||||  |||| ||||||| ||| ||  ||| |||||||    
T  50560 ggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccctatagtttaccccctt 50462  T
Q  283 tctg 286  Q
    ||||    
T  50461 tctg 50458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 50074 - 50151
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgc 262  Q
    ||||||||||||||||| |||| |||   |||| ||||||||| ||||||||||||||| ||||||  |||| |||||||    
T  50074 aggcttaattgcactttccccctatag--tttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgc 50151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 178 - 274
Target Start/End: Original strand, 205681 - 205774
Alignment:
Q  178 aatataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    |||| ||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||| | |||||  |||| | |||||||||| ||||||||    
T  205681 aataaaggcttaattgcatttttctccc-tatcttttgctaattgtgcgattttgcaccccctcttttt--ttgaacgattttgcacctcatctttt 205774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 7454 - 7510
Alignment:
Q  183 aggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccat 240  Q
    |||||||||||||||||| |||| |||||||||| |||| ||||||||||||||||||    
T  7454 aggcttaattgcactttttcccc-tatcttttgctaattatgcgattttgcaccccat 7510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 7653 - 7600
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcacccc 238  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||| |||||    
T  7653 ggcttaattgcactttttcccc-tatcttttgctaattgtgcgattttgtacccc 7600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 1511 - 1566
Alignment:
Q  184 ggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccat 240  Q
    ||||||||||||||||| || | |||||||||||||||||| |||||||||||||||    
T  1511 ggcttaattgcactttttcctc-tatcttttgccaattgtgtgattttgcaccccat 1566  T

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Target: scaffold1221; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 1834 - 1747
Alignment:
Q  187 ttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttt-taattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||||||| |||||||||   |||||||||||||||||| | | |||| |  |||||| ||||||||||| |||||||    
T  1834 ttaattgcacttttccccc-tatcttttgtttattgtgcgattttgcacctcctcttttctttttgagcgattttgcaccctatctttt 1747  T

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Target: scaffold0598 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 6927 - 6877
Alignment:
Q  185 gcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccc 237  Q
    ||||||||||||||| ||||| ||||||||||||||||||| |||||||||||    
T  6927 gcttaattgcactttcccccc-tatcttttgccaattgtgc-attttgcaccc 6877  T

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Target: scaffold0598; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 6604 - 6659
Alignment:
Q  181 ataggcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcacc 236  Q
    |||| |||||||||||| ||||||| |||||||||  ||||||| |||||||||||    
T  6604 atagacttaattgcactgttcccccctatcttttgttaattgtgtgattttgcacc 6659  T

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Target: scaffold0035 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 289
Target Start/End: Original strand, 72967 - 73070
Alignment:
Q  185 gcttaattgcacttttcccccatatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttc 284  Q
    ||||||||||| ||||||||  |||||||||| |||||||| |||||||||| | | |||||  || ||  ||||||||| ||||||||| || || |||    
T  72967 gcttaattgcatttttcccctttatcttttgctaattgtgcaattttgcaccgcctcttttt-tttaagtgattttgcactccatcttttgccgccattc 73065  T
Q  285 tggtt 289  Q
    |||||    
T  73066 tggtt 73070  T

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Target: scaffold0035; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 73089 - 73177
Alignment:
Q  187 ttaattgcacttttcccccatatctttt-gccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttt 274  Q
    ||||||||||||||  ||| |||||||| | ||| |||||||||||||||||| | || ||  ||| || |||||||||| ||||||||    
T  73089 ttaattgcacttttgtcccctatctttttgtcaactgtgcgattttgcaccccctgttcttttttgggcgattttgcacctcatctttt 73177  T

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