View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21687_high_10 (Length: 356)

Name: NF21687_high_10
Description: NF21687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21687_high_10
NF21687_high_10
[»] scaffold0024 (3 HSPs)
scaffold0024 (91-355)||(21161-21427)
scaffold0024 (23-228)||(58791-58995)
scaffold0024 (266-355)||(58990-59079)
[»] chr1 (38 HSPs)
chr1 (88-213)||(15784253-15784380)
chr1 (108-182)||(7028230-7028304)
chr1 (88-170)||(37841916-37841998)
chr1 (111-207)||(10744249-10744346)
chr1 (106-170)||(836409-836473)
chr1 (94-170)||(9572178-9572254)
chr1 (104-170)||(34952149-34952215)
chr1 (94-170)||(23544710-23544786)
chr1 (116-160)||(47432042-47432086)
chr1 (93-168)||(51190784-51190859)
chr1 (92-166)||(8852782-8852856)
chr1 (109-171)||(45145165-45145227)
chr1 (108-170)||(49888705-49888767)
chr1 (117-170)||(15687143-15687196)
chr1 (93-170)||(41163074-41163151)
chr1 (90-170)||(9656566-9656650)
chr1 (119-170)||(36070199-36070250)
chr1 (109-168)||(36151577-36151636)
chr1 (119-170)||(45990128-45990179)
chr1 (89-151)||(7137090-7137152)
chr1 (116-166)||(30582022-30582072)
chr1 (108-170)||(34619448-34619510)
chr1 (120-166)||(41184724-41184770)
chr1 (116-166)||(41505633-41505682)
chr1 (133-182)||(1729670-1729719)
chr1 (109-170)||(4256112-4256173)
chr1 (109-182)||(27140424-27140497)
chr1 (91-160)||(30581723-30581792)
chr1 (95-172)||(46252750-46252827)
chr1 (133-170)||(47498906-47498943)
chr1 (272-304)||(601163-601195)
chr1 (116-168)||(1232964-1233016)
chr1 (142-170)||(5243550-5243578)
chr1 (114-166)||(14576727-14576779)
chr1 (122-166)||(15477530-15477574)
chr1 (116-156)||(30043855-30043895)
chr1 (110-170)||(37842425-37842485)
chr1 (116-160)||(46499934-46499978)
[»] chr8 (18 HSPs)
chr8 (90-167)||(41475133-41475210)
chr8 (88-172)||(37444483-37444567)
chr8 (88-170)||(16210956-16211038)
chr8 (94-170)||(3537101-3537177)
chr8 (109-167)||(7646145-7646203)
chr8 (92-182)||(26215418-26215508)
chr8 (99-170)||(14280471-14280542)
chr8 (123-170)||(42237492-42237539)
chr8 (92-170)||(3936771-3936849)
chr8 (116-166)||(12497305-12497355)
chr8 (120-170)||(35374443-35374493)
chr8 (107-161)||(42597338-42597392)
chr8 (109-170)||(2364543-2364604)
chr8 (109-166)||(4558737-4558794)
chr8 (116-165)||(35534686-35534734)
chr8 (116-173)||(35534928-35534985)
chr8 (163-207)||(27049367-27049411)
chr8 (114-166)||(29205752-29205804)
[»] chr3 (26 HSPs)
chr3 (90-205)||(34637998-34638115)
chr3 (92-170)||(25447314-25447392)
chr3 (109-182)||(2128309-2128382)
chr3 (88-208)||(20669097-20669218)
chr3 (90-166)||(49465738-49465813)
chr3 (111-178)||(42809242-42809309)
chr3 (116-166)||(30956700-30956750)
chr3 (116-166)||(30972512-30972562)
chr3 (116-182)||(42808925-42808991)
chr3 (104-170)||(44061093-44061159)
chr3 (92-168)||(402614-402689)
chr3 (92-168)||(31403280-31403356)
chr3 (88-168)||(52597607-52597686)
chr3 (116-167)||(15304420-15304471)
chr3 (116-166)||(24684897-24684947)
chr3 (120-170)||(33405237-33405287)
chr3 (116-170)||(37689454-37689508)
chr3 (88-152)||(30574002-30574064)
chr3 (93-161)||(46030911-46030980)
chr3 (110-170)||(1395611-1395671)
chr3 (116-168)||(10101548-10101600)
chr3 (116-168)||(10212473-10212525)
chr3 (92-152)||(34235164-34235224)
chr3 (92-168)||(35328236-35328311)
chr3 (139-167)||(39921744-39921772)
chr3 (116-160)||(46778307-46778351)
[»] chr6 (24 HSPs)
chr6 (91-170)||(9093626-9093705)
chr6 (92-206)||(264293-264407)
chr6 (108-170)||(29274299-29274361)
chr6 (92-170)||(32206090-32206168)
chr6 (89-165)||(33736757-33736833)
chr6 (93-164)||(9559617-9559688)
chr6 (109-172)||(20671933-20671996)
chr6 (89-159)||(4163094-4163164)
chr6 (89-159)||(4224715-4224785)
chr6 (116-166)||(8147648-8147698)
chr6 (132-182)||(21539146-21539196)
chr6 (108-182)||(34584295-34584369)
chr6 (118-170)||(3785770-3785822)
chr6 (92-160)||(33117464-33117532)
chr6 (123-170)||(28621180-28621227)
chr6 (116-175)||(35070695-35070754)
chr6 (116-166)||(24626241-24626291)
chr6 (109-167)||(24836272-24836330)
chr6 (93-171)||(31624007-31624085)
chr6 (109-208)||(2455204-2455305)
chr6 (108-173)||(3217257-3217322)
chr6 (116-161)||(11363447-11363492)
chr6 (116-160)||(30536638-30536682)
chr6 (116-160)||(34405051-34405095)
[»] chr5 (27 HSPs)
chr5 (93-170)||(12425494-12425571)
chr5 (96-182)||(465880-465966)
chr5 (116-181)||(11615454-11615519)
chr5 (92-230)||(39105386-39105533)
chr5 (93-169)||(7674571-7674647)
chr5 (92-170)||(42569050-42569128)
chr5 (93-169)||(9202819-9202895)
chr5 (95-208)||(4014448-4014569)
chr5 (111-170)||(14932231-14932289)
chr5 (88-150)||(28776893-28776955)
chr5 (116-166)||(35446001-35446051)
chr5 (90-170)||(3566388-3566468)
chr5 (116-160)||(42500305-42500349)
chr5 (92-163)||(11835199-11835270)
chr5 (108-167)||(37112331-37112390)
chr5 (116-166)||(3932759-3932809)
chr5 (92-130)||(6096465-6096503)
chr5 (163-208)||(7984969-7985015)
chr5 (107-168)||(4855635-4855696)
chr5 (116-161)||(10363696-10363741)
chr5 (108-181)||(11054124-11054196)
chr5 (271-308)||(42646792-42646829)
chr5 (88-160)||(5963362-5963434)
chr5 (116-160)||(9107058-9107102)
chr5 (92-160)||(19460466-19460534)
chr5 (116-168)||(39594754-39594805)
chr5 (90-170)||(41819532-41819612)
[»] chr4 (32 HSPs)
chr4 (92-170)||(3155525-3155603)
chr4 (90-170)||(1706542-1706622)
chr4 (92-170)||(51630033-51630111)
chr4 (111-168)||(17884009-17884066)
chr4 (93-170)||(26520299-26520376)
chr4 (106-170)||(25885795-25885859)
chr4 (133-208)||(47800593-47800669)
chr4 (108-168)||(437504-437565)
chr4 (92-157)||(50662815-50662880)
chr4 (117-166)||(50681163-50681212)
chr4 (116-160)||(43505902-43505946)
chr4 (92-155)||(6364071-6364134)
chr4 (139-170)||(27043900-27043931)
chr4 (92-170)||(49004042-49004118)
chr4 (108-166)||(7601697-7601755)
chr4 (116-166)||(17204084-17204134)
chr4 (140-178)||(22539116-22539154)
chr4 (116-182)||(22684574-22684640)
chr4 (120-170)||(23459578-23459628)
chr4 (116-166)||(41336707-41336756)
chr4 (108-166)||(44138497-44138555)
chr4 (88-153)||(2733238-2733303)
chr4 (121-170)||(25332725-25332774)
chr4 (116-165)||(25904285-25904334)
chr4 (92-169)||(44249208-44249285)
chr4 (109-170)||(52326179-52326240)
chr4 (93-177)||(2987112-2987196)
chr4 (121-161)||(13216283-13216323)
chr4 (109-161)||(20907112-20907164)
chr4 (109-149)||(21193937-21193977)
chr4 (118-182)||(41701499-41701563)
chr4 (88-160)||(44863042-44863114)
[»] chr2 (28 HSPs)
chr2 (92-166)||(42420368-42420442)
chr2 (94-170)||(42457872-42457948)
chr2 (108-230)||(3611164-3611295)
chr2 (92-160)||(4026739-4026807)
chr2 (92-159)||(39567825-39567892)
chr2 (108-170)||(18962108-18962170)
chr2 (108-170)||(25609734-25609796)
chr2 (108-170)||(28902015-28902077)
chr2 (116-170)||(35459856-35459910)
chr2 (116-166)||(41241206-41241256)
chr2 (116-166)||(42868535-42868585)
chr2 (259-300)||(40672750-40672791)
chr2 (118-162)||(10619293-10619337)
chr2 (133-208)||(16451088-16451164)
chr2 (93-165)||(23747227-23747299)
chr2 (88-164)||(26143717-26143792)
chr2 (90-175)||(44600459-44600546)
chr2 (92-167)||(9395052-9395127)
chr2 (94-158)||(13220378-13220438)
chr2 (105-168)||(34339841-34339904)
chr2 (116-166)||(12464547-12464597)
chr2 (116-166)||(13325516-13325566)
chr2 (93-170)||(36114342-36114419)
chr2 (121-166)||(41851486-41851531)
chr2 (97-170)||(42907286-42907359)
chr2 (108-161)||(44119722-44119775)
chr2 (120-160)||(32592537-32592577)
chr2 (133-169)||(36114594-36114630)
[»] chr7 (20 HSPs)
chr7 (91-160)||(40009391-40009460)
chr7 (112-180)||(26935610-26935678)
chr7 (109-168)||(28613606-28613665)
chr7 (109-172)||(30133988-30134051)
chr7 (88-170)||(20881706-20881788)
chr7 (128-170)||(30180009-30180051)
chr7 (116-159)||(119856-119899)
chr7 (119-170)||(40689056-40689107)
chr7 (104-170)||(36874035-36874101)
chr7 (163-221)||(39393589-39393647)
chr7 (116-158)||(45806408-45806450)
chr7 (116-166)||(46078093-46078143)
chr7 (109-170)||(22759125-22759186)
chr7 (271-308)||(33266397-33266434)
chr7 (121-170)||(34083595-34083644)
chr7 (120-157)||(45004716-45004753)
chr7 (109-169)||(1417203-1417263)
chr7 (134-170)||(8094234-8094270)
chr7 (108-168)||(35536045-35536105)
chr7 (116-160)||(43152982-43153026)


Alignment Details
Target: scaffold0024 (Bit Score: 179; Significance: 1e-96; HSPs: 3)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 91 - 355
Target Start/End: Complemental strand, 21427 - 21161
Alignment:
Q  91 acttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagcg-tcttgg 189  Q
    ||||| |||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||  | ||||    
T  21427 acttaccatgataagcacttatgtataagctatttttataggaaaagataaaataaagttaaattgttttcgtataagctgttttcataagctatattgg 21328  T
Q  190 agaaattatgaaaataagcaaaaacagtttatcaacaatgttagtatgttaaaagttgtttttacatgttcttccaaacaatagataagctcatgtaagt 289  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||  |||||    
T  21327 agaaattatgaaaataaactaaaacagtttatcaacaatgttagtatgttaaaagctgtttttacatgttcttccaaacagtagataagctcagataagt 21228  T
Q  290 caatccaaacatacccttatccatttgaat-atatgctccttagcatcgacatttttgatagaaggc 355  Q
    ||||||||||||||| |||||||||| ||| ||||||||||||||| ||||| ||||||| ||||||    
T  21227 caatccaaacatacctttatccatttcaataatatgctccttagcaccgacacttttgatggaaggc 21161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 23 - 228
Target Start/End: Original strand, 58791 - 58995
Alignment:
Q  23 atcatcatttttcttaaactgggttttaggccctggttggactaacgtcnnnnnnnnnagcttatagcacttatcatgatcagcacttatgtgtaagcta 122  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||         ||||||||||||||||||||||||||||||||||||||||||    
T  58791 atcatcatttttcttaaactgggttttaggccctgtttggaccaacgtctttttttt-agcttatagcacttatcatgatcagcacttatgtgtaagcta 58889  T
Q  123 tttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagcgtcttggagaaattatgaaaataagcaaaaacagtttatc 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  58890 tttttataggaaaagttaaaataaagttaaattgttttcgtataagctgttttcataagcgtcttggagaaattatgaaaataagcaaaaacagtttatc 58989  T
Q  223 aacaat 228  Q
    ||||||    
T  58990 aacaat 58995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 266 - 355
Target Start/End: Original strand, 58990 - 59079
Alignment:
Q  266 aacaatagataagctcatgtaagtcaatccaaacatacccttatccatttgaatatatgctccttagcatcgacatttttgatagaaggc 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  58990 aacaatagataagctcatgtaagtcaatccaaacatacccttatccatttgaatatatgctccttagcatcgacacttttgatagaaggc 59079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 9e-21; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 88 - 213
Target Start/End: Original strand, 15784253 - 15784380
Alignment:
Q  88 agcacttatcatgatcagcacttatgtgtaagctatttttataggaaaa-gttaaaataaagttaaattgttttcgtataagcttttttcataagc-gtc 185  Q
    ||||||||| ||||| ||| ||||||| |||||||||| || || |||| | ||||||||||||||||||||||||||||||||  ||| ||||||  ||    
T  15784253 agcacttattatgataagcgcttatgtataagctatttctaaagtaaaaaggtaaaataaagttaaattgttttcgtataagctggttttataagctatc 15784352  T
Q  186 ttggagaaattatgaaaataagcaaaaa 213  Q
    |||||||| || ||||||||||| ||||    
T  15784353 ttggagaacttgtgaaaataagctaaaa 15784380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 7028230 - 7028304
Alignment:
Q  108 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc 182  Q
    ||||||| ||| |||||| ||||| ||||| |||||||||||||| ||||||| ||||||||| |||||||||||    
T  7028230 cttatgtataaactatttctatagcaaaagataaaataaagttaagttgtttttgtataagctgttttcataagc 7028304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 170
Target Start/End: Original strand, 37841916 - 37841998
Alignment:
Q  88 agcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||||||||||| || ||| |||| |||||||||  ||||  ||| | ||||||||||||||||||||||||||||||||    
T  37841916 agcacttatcatgataagtactcatgtataagctattcctataacaaatgataaaataaagttaaattgttttcgtataagct 37841998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 10744249 - 10744346
Alignment:
Q  111 atgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc-gtcttggagaaattatgaaaataag 207  Q
    |||| ||||||||||| ||   ||||| |||||||||||| |||||||||| |||||||| ||||||||||| ||||| ||||| |||| ||||||||    
T  10744249 atgtataagctattttgatgaaaaaagataaaataaagttgaattgttttcctataagctgttttcataagctgtcttagagaacttataaaaataag 10744346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 836473 - 836409
Alignment:
Q  106 cacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||||||||||||||||||||||  |||| |||||||||  ||||||||||| |||||||||    
T  836473 cacttatgtgtaagctatttttatagtgaaagataaaataaaactaaattgtttttgtataagct 836409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 170
Target Start/End: Complemental strand, 9572254 - 9572178
Alignment:
Q  94 tatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||||||||| || |||| | |||||||| ||||| ||||| |||||||||||||||||| ||| |||||||||    
T  9572254 tatcatgatcagcgctaatgtattagctatttctatagcaaaagataaaataaagttaaattgcttttgtataagct 9572178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 34952149 - 34952215
Alignment:
Q  104 agcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||| ||||| |||||||||| || || | |||||||||||||||||||||||||||| |||||||    
T  34952149 agcacctatgtataagctatttctagagcagaagttaaaataaagttaaattgttttcgaataagct 34952215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 170
Target Start/End: Complemental strand, 23544786 - 23544710
Alignment:
Q  94 tatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||||| ||| ||||||| |||||||||| ||| | ||||| |||||| |||| ||||||||||| ||||||||    
T  23544786 tatcatgataagcgcttatgtataagctatttctatggaaaaagataaaattaagtcaaattgttttcatataagct 23544710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 47432042 - 47432086
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgtttt 160  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||    
T  47432042 taagctatttttatagaaaaagataaaataaagttaaattgtttt 47432086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 168
Target Start/End: Original strand, 51190784 - 51190859
Alignment:
Q  93 ttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 168  Q
    |||||||||| | ||||||| |  ||||||||| || || ||||| |||||||||||||||||||||| |||||||    
T  51190784 ttatcatgataaacacttatttaaaagctatttgtaaagcaaaagataaaataaagttaaattgtttttgtataag 51190859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 166
Target Start/End: Original strand, 8852782 - 8852856
Alignment:
Q  92 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    ||||||||||| | |||| |||| ||||||||||||| |  ||||| ||||||||||||| ||||||||| ||||    
T  8852782 cttatcatgataaacactaatgtataagctatttttacaacaaaagataaaataaagttatattgttttcttata 8852856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 45145165 - 45145227
Alignment:
Q  109 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagctt 171  Q
    |||||| |||||||||||||||| ||||| ||||||||  |||||||||||| ||||| ||||    
T  45145165 ttatgtataagctatttttatagcaaaagataaaataatattaaattgtttttgtatatgctt 45145227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 170
Target Start/End: Original strand, 49888705 - 49888767
Alignment:
Q  108 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||| |||||||||| | | | ||||| |||||||||||| |||||||||||||||||||    
T  49888705 cttatgtataagctatttctttggaaaaagataaaataaagtttaattgttttcgtataagct 49888767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 170
Target Start/End: Complemental strand, 15687196 - 15687143
Alignment:
Q  117 aagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||||| ||||  ||||  ||||||||||||||||||||||||||||||||    
T  15687196 aagctatttctataacaaaatataaaataaagttaaattgttttcgtataagct 15687143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 41163151 - 41163074
Alignment:
Q  93 ttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||| |||| ||| ||||||| | || ||||||||| | ||||| |||||| ||||||||||| |||||||||||||    
T  41163151 ttatcctgataagcgcttatgtatgagttatttttattgcaaaagataaaatgaagttaaattgctttcgtataagct 41163074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 170
Target Start/End: Original strand, 9656566 - 9656650
Alignment:
Q  90 cacttatcatgatcagcacttatgtgtaagctattttt----ataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||||||||| ||||| ||||| |||||||||| |    |||| ||||  ||||||||||||||||| ||||| ||||||||    
T  9656566 cacttatcatgataagcacctatgtataagctatttatttctatagcaaaaaataaaataaagttaaattattttcatataagct 9656650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 119 - 170
Target Start/End: Original strand, 36070199 - 36070250
Alignment:
Q  119 gctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||||||||  ||||| ||||||||||||||||||| |||| |||||||    
T  36070199 gctatttttataacaaaagataaaataaagttaaattgtcttcggataagct 36070250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 109 - 168
Target Start/End: Complemental strand, 36151636 - 36151577
Alignment:
Q  109 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 168  Q
    |||||| ||||||||||  |||  ||||| ||||||||||| ||||||||||||||||||    
T  36151636 ttatgtataagctatttcaataacaaaagataaaataaagtcaaattgttttcgtataag 36151577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 119 - 170
Target Start/End: Complemental strand, 45990179 - 45990128
Alignment:
Q  119 gctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||||||||  ||||| ||||||||||| ||||||||||| ||||||||    
T  45990179 gctatttttatatcaaaagataaaataaagtaaaattgttttcatataagct 45990128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 7137152 - 7137090
Alignment:
Q  89 gcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagtta 151  Q
    ||||||||| |||| ||| ||||| | ||| |||||||||||  |||||||||||||||||||    
T  7137152 gcacttatcttgataagcgcttatatataaactatttttataacaaaagttaaaataaagtta 7137090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 30582072 - 30582022
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    |||| ||||||||||| ||||| |||||||||||||| ||||||| |||||    
T  30582072 taaggtatttttatagaaaaagataaaataaagttaacttgtttttgtata 30582022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 34619510 - 34619448
Alignment:
Q  108 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||| ||||| |||| ||||  ||||| |||||||| ||||||||||||| |||||||||    
T  34619510 cttatgtataagccatttctataacaaaagataaaataaggttaaattgtttttgtataagct 34619448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 166
Target Start/End: Complemental strand, 41184770 - 41184724
Alignment:
Q  120 ctatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    |||||||||||| ||||| |||||||| ||||||||||||| |||||    
T  41184770 ctatttttatagcaaaagataaaataatgttaaattgtttttgtata 41184724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 41505633 - 41505682
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    |||||||||||||||| ||| || ||| |||||||||||||||||||||||    
T  41505633 taagctatttttatagaaaacgt-aaattaaagttaaattgttttcgtata 41505682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 1729719 - 1729670
Alignment:
Q  133 aaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc 182  Q
    ||||| ||||||||| | | |||||||||||||||||| |||||||||||    
T  1729719 aaaagataaaataaactgatattgttttcgtataagctattttcataagc 1729670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 4256173 - 4256112
Alignment:
Q  109 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    |||||| |||||||||| || |  ||||| || |||||||||||||| ||||||||||||||    
T  4256173 ttatgtataagctatttctacaacaaaagatacaataaagttaaattattttcgtataagct 4256112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 182
Target Start/End: Original strand, 27140424 - 27140497
Alignment:
Q  109 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc 182  Q
    ||||||||||| ||||| ||||  ||||| ||||||||  ||||||||||||  |||||||| |||| ||||||    
T  27140424 ttatgtgtaagttatttctataacaaaagataaaataatattaaattgtttttatataagctgtttttataagc 27140497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 160
Target Start/End: Original strand, 30581723 - 30581792
Alignment:
Q  91 acttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgtttt 160  Q
    |||| ||||||| |||| ||||   |||||||||||||||| ||| | | ||||||||||||||||||||    
T  30581723 acttttcatgataagcagttatacataagctatttttatagaaaacgatgaaataaagttaaattgtttt 30581792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 172
Target Start/End: Complemental strand, 46252827 - 46252750
Alignment:
Q  95 atcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttt 172  Q
    ||||||||  ||||| |||| || ||||||||||||  ||||| |||||||||||||||||  ||| | |||||||||    
T  46252827 atcatgatatgcactaatgtataggctatttttataacaaaagataaaataaagttaaatttcttttgcataagcttt 46252750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 47498943 - 47498906
Alignment:
Q  133 aaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  47498943 aaaagataaaataaagttaaattattttcgtataagct 47498906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 304
Target Start/End: Original strand, 601163 - 601195
Alignment:
Q  272 agataagctcatgtaagtcaatccaaacatacc 304  Q
    ||||||||||| |||||||||||||||||||||    
T  601163 agataagctcaagtaagtcaatccaaacatacc 601195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 1233016 - 1232964
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 168  Q
    |||||| ||||||||  ||||  ||||||||||||||||| ||||||||||||    
T  1233016 taagctgtttttataacaaaacataaaataaagttaaattattttcgtataag 1232964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 170
Target Start/End: Original strand, 5243550 - 5243578
Alignment:
Q  142 aataaagttaaattgttttcgtataagct 170  Q
    |||||||||||||||||||||||||||||    
T  5243550 aataaagttaaattgttttcgtataagct 5243578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 14576779 - 14576727
Alignment:
Q  114 tgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    ||||||||||||  |||| ||| | |||||||||||||||||||||| |||||    
T  14576779 tgtaagctatttccatagtaaaggataaaataaagttaaattgtttttgtata 14576727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 15477530 - 15477574
Alignment:
Q  122 atttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    |||| ||||| ||||| |||||||||||||||||||||| |||||    
T  15477530 atttctatagtaaaagataaaataaagttaaattgtttttgtata 15477574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 30043895 - 30043855
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattg 156  Q
    |||||||||| ||||||||||| |||||||| |||||||||    
T  30043895 taagctatttctataggaaaagataaaataatgttaaattg 30043855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 37842485 - 37842425
Alignment:
Q  110 tatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||| |||||||||| ||||| ||||| | ||||||||||||| ||| |||| |||||||    
T  37842485 tatgtataagctatttctatagcaaaagatgaaataaagttaaactgtgttcgaataagct 37842425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 160
Target Start/End: Complemental strand, 46499978 - 46499934
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgtttt 160  Q
    |||||||||| |||| |||||| ||||||||||| ||||||||||    
T  46499978 taagctatttctataagaaaagataaaataaagtcaaattgtttt 46499934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 167
Target Start/End: Complemental strand, 41475210 - 41475133
Alignment:
Q  90 cacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataa 167  Q
    ||||| ||||||| ||||||||||| ||||||| |||||||| ||||| ||||||| |||||||||||||||||||||    
T  41475210 cacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgttttcgtataa 41475133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 37444567 - 37444483
Alignment:
Q  88 agcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttt 172  Q
    ||||||||||||||| ||| ||||||| |||||||||  ||||  ||||| |||| |||||||||||||||||||||||||||||    
T  37444567 agcacttatcatgataagcgcttatgtataagctattactataacaaaagataaagtaaagttaaattgttttcgtataagcttt 37444483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 170
Target Start/End: Complemental strand, 16211038 - 16210956
Alignment:
Q  88 agcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    |||||||||||||||  ||||| |||| |||||||||| ||||| ||| | ||||||||||||| ||||||||| ||||||||    
T  16211038 agcacttatcatgatacgcactcatgtataagctatttctatagtaaatgataaaataaagttacattgttttcatataagct 16210956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 170
Target Start/End: Complemental strand, 3537177 - 3537101
Alignment:
Q  94 tatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    |||| |||| ||||||| ||| ||||| |||| ||||| ||||| ||||||||||| ||||||||||||||||||||    
T  3537177 tatcgtgataagcacttttgtataagcaatttctatagcaaaagataaaataaagtcaaattgttttcgtataagct 3537101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 167
Target Start/End: Original strand, 7646145 - 7646203
Alignment:
Q  109 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataa 167  Q
    |||||| |||||||||| |||| |||||| |||||||||||||||||||||| ||||||    
T  7646145 ttatgtataagctatttctataagaaaaggtaaaataaagttaaattgtttttgtataa 7646203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 26215418 - 26215508
Alignment:
Q  92 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc 182  Q
    ||||| ||||| ||| ||||||| |||||||||| ||||  ||||| ||||||||||||||| | |||||||||||  | |||||||||||    
T  26215418 cttataatgataagcgcttatgtataagctatttctataacaaaagataaaataaagttaaactattttcgtataatatgttttcataagc 26215508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 14280542 - 14280471
Alignment:
Q  99 tgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    |||| ||| ||||||| ||| |||||| ||||| ||||| |||||| || ||||||||||||| ||||||||    
T  14280542 tgataagcgcttatgtataacctatttctatagcaaaagataaaattaaattaaattgttttcatataagct 14280471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 123 - 170
Target Start/End: Complemental strand, 42237539 - 42237492
Alignment:
Q  123 tttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||||  ||||| ||||||||||||||||||||||| ||||||||    
T  42237539 tttttataacaaaagataaaataaagttaaattgttttcatataagct 42237492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 3936771 - 3936849
Alignment:
Q  92 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    |||||||||||  |||||||||| ||| |||||| ||||  ||| | |||||||||| |||||||| ||| ||||||||    
T  3936771 cttatcatgataggcacttatgtataatctatttctataacaaaggataaaataaagctaaattgtcttcctataagct 3936849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 12497355 - 12497305
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    ||||| |||||||||| ||||| |||||||||||||| ||||||| |||||    
T  12497355 taagccatttttatagcaaaagataaaataaagttaacttgtttttgtata 12497305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 35374493 - 35374443
Alignment:
Q  120 ctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    |||||| |||||  |||| ||||||||||||||||||||||| ||||||||    
T  35374493 ctatttctatagcgaaagataaaataaagttaaattgttttcatataagct 35374443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 42597338 - 42597392
Alignment:
Q  107 acttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttc 161  Q
    |||||||| |||||||||| ||||  ||||| ||||||||||| |||||||||||    
T  42597338 acttatgtataagctatttctataacaaaagataaaataaagtaaaattgttttc 42597392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 2364604 - 2364543
Alignment:
Q  109 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    |||||| || ||||||||||||| ||||| ||||||||||| |||||  ||| |||||||||    
T  2364604 ttatgtatacgctatttttatagcaaaagataaaataaagtcaaatttcttttgtataagct 2364543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 4558737 - 4558794
Alignment:
Q  109 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    |||||| |||||||||| ||||  ||||| ||||||||||||||||| ||||| ||||    
T  4558737 ttatgtataagctatttctataataaaagataaaataaagttaaattattttcatata 4558794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 35534734 - 35534686
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtat 165  Q
    |||| ||||||||||| ||||| |||||||||||||||||||||| ||||    
T  35534734 taagatatttttatag-aaaagataaaataaagttaaattgtttttgtat 35534686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 173
Target Start/End: Complemental strand, 35534985 - 35534928
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagctttt 173  Q
    |||||||||| ||||  ||||||||||||||||| ||| |||||| |||||| |||||    
T  35534985 taagctatttctataataaaagttaaaataaagtcaaactgtttttgtataaactttt 35534928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 27049367 - 27049411
Alignment:
Q  163 tataagcttttttcataagcgtcttggagaaattatgaaaataag 207  Q
    ||||| ||||||||||||||   ||||||||||||||||||||||    
T  27049367 tataaacttttttcataagctatttggagaaattatgaaaataag 27049411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 29205752 - 29205804
Alignment:
Q  114 tgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    ||||| |||||| ||||| ||||| |||||| ||||||||||||||| |||||    
T  29205752 tgtaaactatttctatagaaaaagataaaatgaagttaaattgtttttgtata 29205804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 205
Target Start/End: Complemental strand, 34638115 - 34637998
Alignment:
Q  90 cacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaat-aaagttaaattgttttcgtataagcttttttcataagc-gtctt 187  Q
    ||||||||||||| | | ||||| | |||||||||| ||||| ||||| |||||| |||||||||||||||||||||||||| |||||| ||||   |||    
T  34638115 cacttatcatgataaccgcttatatataagctatttctatagaaaaagataaaattaaagttaaattgttttcgtataagctgttttcaaaagctacctt 34638016  T
Q  188 ggagaaattatgaaaata 205  Q
    |||||| |||||||||||    
T  34638015 ggagaatttatgaaaata 34637998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 25447392 - 25447314
Alignment:
Q  92 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||||||  ||||||| ||||||| |||||| ||||| ||||| ||||||||| |||||||||||| |||||||||    
T  25447392 cttatcatgagaagcacttttgtgtaaactatttctatagtaaaagataaaataaacttaaattgtttttgtataagct 25447314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 182
Target Start/End: Complemental strand, 2128382 - 2128309
Alignment:
Q  109 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc 182  Q
    |||||| |||||||||| ||||  ||||| ||||||||||||||||||||||  | |||||| |||||||||||    
T  2128382 ttatgtataagctatttctataacaaaagataaaataaagttaaattgttttactgtaagctgttttcataagc 2128309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 208
Target Start/End: Original strand, 20669097 - 20669218
Alignment:
Q  88 agcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc-gtct 186  Q
    |||| |||||||||| ||||||||||| |||||||||| ||||  || |  || |||||||| ||| |||| || |||||||| |||||||||||  |||    
T  20669097 agcatttatcatgataagcacttatgtataagctatttctataacaagatatacaataaagtcaaaatgttgtcatataagctgttttcataagctatct 20669196  T
Q  187 tggagaaattatgaaaataagc 208  Q
    ||||||  ||||| ||||||||    
T  20669197 tggagagcttatgtaaataagc 20669218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 90 - 166
Target Start/End: Complemental strand, 49465813 - 49465738
Alignment:
Q  90 cacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    ||||||||||||  | | |||||||||||||||||||||||  ||||| |||||||||||| |||| ||||||||||    
T  49465813 cacttatcatgagaaacgcttatgtgtaagctatttttataacaaaagataaaataaagtt-aatttttttcgtata 49465738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 42809242 - 42809309
Alignment:
Q  111 atgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcat 178  Q
    |||| |||||||||| ||||  ||||| ||||||| ||||||||||||||| |||||||| |||||||    
T  42809242 atgtataagctatttctataacaaaagataaaatatagttaaattgttttcatataagctgttttcat 42809309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 30956750 - 30956700
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    |||||||||| ||||| ||||| |||||||||||||||||||||| |||||    
T  30956750 taagctatttctatagcaaaagataaaataaagttaaattgtttttgtata 30956700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 30972562 - 30972512
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    |||||||||| ||||| ||||| |||||||||||||||||||||| |||||    
T  30972562 taagctatttctatagcaaaagataaaataaagttaaattgtttttgtata 30972512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 42808925 - 42808991
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc 182  Q
    |||||| ||| ||||  ||||| ||||||||||||||||||||||  |||||||| |||||||||||    
T  42808925 taagctgtttctataacaaaagataaaataaagttaaattgtttttatataagctgttttcataagc 42808991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 44061159 - 44061093
Alignment:
Q  104 agcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||| ||| |||||||||| ||||| ||||| |||||||| |||||||||||||  ||||||||    
T  44061159 agcacttctgtataagctatttctatagcaaaagataaaataaggttaaattgtttttctataagct 44061093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 168
Target Start/End: Complemental strand, 402689 - 402614
Alignment:
Q  92 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 168  Q
    ||||||||||| ||  ||||||| |||||||||| ||||| ||||| | || |||| ||||||||||||||||||||    
T  402689 cttatcatgataagggcttatgtataagctatttctatagaaaaagat-aattaaatttaaattgttttcgtataag 402614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 168
Target Start/End: Original strand, 31403280 - 31403356
Alignment:
Q  92 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 168  Q
    |||||||| || ||||||||| | ||||||||||  |||  ||||| |||||| |||||||| ||||||||||||||    
T  31403280 cttatcatcataagcacttatatataagctatttccatatcaaaagataaaatgaagttaaaatgttttcgtataag 31403356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 168
Target Start/End: Original strand, 52597607 - 52597686
Alignment:
Q  88 agcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 168  Q
    ||||||||||||||| ||||||||||| ||||||||||  |||| ||||| |||| | |||| | ||||||||| ||||||    
T  52597607 agcacttatcatgat-agcacttatgtataagctatttccatagtaaaagataaagtgaagtaacattgttttcatataag 52597686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 15304471 - 15304420
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtataa 167  Q
    |||||||||| ||||  ||||| ||||||||||||||||||||||| |||||    
T  15304471 taagctatttctataacaaaagataaaataaagttaaattgttttcatataa 15304420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 24684947 - 24684897
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    |||||||||||||||| ||||| ||||||||| || ||||||||| |||||    
T  24684947 taagctatttttatagaaaaagataaaataaattttaattgtttttgtata 24684897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 33405287 - 33405237
Alignment:
Q  120 ctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    |||||| ||||| ||||| |||||||||||||| |||||||| ||||||||    
T  33405287 ctatttctatagcaaaaggtaaaataaagttaatttgttttcatataagct 33405237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 37689508 - 37689454
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    |||||||||||||||  ||||| |||| |||||||||||| ||||| ||||||||    
T  37689508 taagctatttttataacaaaagataaagtaaagttaaattattttcatataagct 37689454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 30574064 - 30574002
Alignment:
Q  88 agcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaa 152  Q
    |||| |||||||||| ||| ||||||| |||||||||| ||||  ||||| ||||||||||||||    
T  30574064 agcatttatcatgataagcgcttatgtataagctatttctata--aaaagataaaataaagttaa 30574002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 46030911 - 46030980
Alignment:
Q  93 ttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagtt-aaattgttttc 161  Q
    |||||||||| | ||||||| | ||||||||||  |||| ||||| |||||||||||| |||||||||||    
T  46030911 ttatcatgataaacacttatatataagctatttcgatagaaaaagataaaataaagttaaaattgttttc 46030980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 1395611 - 1395671
Alignment:
Q  110 tatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||| |||||||||| ||||  ||||| ||||||||||| ||||| ||||| ||||||||    
T  1395611 tatgtataagctatttctataacaaaagataaaataaagtcaaattattttcatataagct 1395671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 10101600 - 10101548
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 168  Q
    |||| ||||| ||||  ||||| ||||||||||||||||||||||| ||||||    
T  10101600 taagttatttctataacaaaagataaaataaagttaaattgttttcatataag 10101548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 10212525 - 10212473
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 168  Q
    |||| ||||| ||||  ||||| ||||||||||||||||||||||| ||||||    
T  10212525 taagttatttctataacaaaagataaaataaagttaaattgttttcatataag 10212473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 34235224 - 34235164
Alignment:
Q  92 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaa 152  Q
    ||||||||||| |||||||||||  |||||||||  |||| ||||  ||||||||||||||    
T  34235224 cttatcatgataagcacttatgtagaagctatttccatagcaaaatataaaataaagttaa 34235164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 168
Target Start/End: Complemental strand, 35328311 - 35328236
Alignment:
Q  92 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 168  Q
    ||||| ||||| |||||||||||  || |||||  ||||| ||| | |||| |||||||||||||||||||||||||    
T  35328311 cttattatgataagcacttatgtacaacctattactatagcaaaggataaa-taaagttaaattgttttcgtataag 35328236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 167
Target Start/End: Complemental strand, 39921772 - 39921744
Alignment:
Q  139 taaaataaagttaaattgttttcgtataa 167  Q
    |||||||||||||||||||||||||||||    
T  39921772 taaaataaagttaaattgttttcgtataa 39921744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 160
Target Start/End: Complemental strand, 46778351 - 46778307
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgtttt 160  Q
    |||||||||| ||||| || || ||||||||||||||||||||||    
T  46778351 taagctatttctatagcaagagataaaataaagttaaattgtttt 46778307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 9093705 - 9093626
Alignment:
Q  91 acttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    |||||||||||| ||| ||||||  |||||||||| ||||  ||||| ||||||||||||||||||||||||||||||||    
T  9093705 acttatcatgataagcgcttatggataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagct 9093626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 264293 - 264407
Alignment:
Q  92 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagcgtcttggag 191  Q
    ||||||||||| ||  ||||| | |||||||||| || || ||||| |||||||||||||||| |||||||| |||||| ||||||||    ||||||||    
T  264293 cttatcatgataagtgcttatatataagctatttctaaagcaaaagataaaataaagttaaatcgttttcgtctaagctattttcatagctatcttggag 264392  T
Q  192 aaattatgaaaataa 206  Q
    || ||||||||||||    
T  264393 aacttatgaaaataa 264407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 29274361 - 29274299
Alignment:
Q  108 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||| |||||||||| ||||| ||||| ||||||||||| ||||||||||| ||||||||    
T  29274361 cttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagct 29274299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 32206168 - 32206090
Alignment:
Q  92 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||||||| |||||||||||||||||||| | |||   ||||| | ||||||||||||||| |||| |||||||||    
T  32206168 cttatcatgataagcacttatgtgtaagctatctctatgacaaaagatgaaataaagttaaattattttagtataagct 32206090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 33736757 - 33736833
Alignment:
Q  89 gcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtat 165  Q
    |||||||||||||||||||||||||| |||| ||||| ||||  | ||  ||||||||||||||||||  |||||||    
T  33736757 gcacttatcatgatcagcacttatgtataagttatttctataacataacataaaataaagttaaattgccttcgtat 33736833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 9559688 - 9559617
Alignment:
Q  93 ttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgta 164  Q
    |||||| ||| ||| ||||||| |||| ||||| ||||| ||||| ||||||||| ||||||||||||||||    
T  9559688 ttatcaagataagcgcttatgtataagttatttctatagcaaaagataaaataaatttaaattgttttcgta 9559617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 172
Target Start/End: Complemental strand, 20671996 - 20671933
Alignment:
Q  109 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttt 172  Q
    |||||| |||||||||| || |  ||||| ||||||||||| ||||||||||||||||||||||    
T  20671996 ttatgtataagctatttctagatcaaaagataaaataaagtcaaattgttttcgtataagcttt 20671933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 4163094 - 4163164
Alignment:
Q  89 gcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttt 159  Q
    |||||||||||||| | ||||||    |||||||||||||||| || || |||||||||||||||||||||    
T  4163094 gcacttatcatgataaacacttacacataagctatttttatagaaatagataaaataaagttaaattgttt 4163164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 4224715 - 4224785
Alignment:
Q  89 gcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttt 159  Q
    |||||||||||||| | ||||||    |||||||||||||||| || || |||||||||||||||||||||    
T  4224715 gcacttatcatgataaacacttacacataagctatttttatagaaatagataaaataaagttaaattgttt 4224785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 8147648 - 8147698
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||| |||||    
T  8147648 taagctatttttatagcaaaagataaaataaagttgaattgtttttgtata 8147698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 21539146 - 21539196
Alignment:
Q  132 gaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc 182  Q
    |||||| |||||||||||| |||||||||| |||||||| |||||||||||    
T  21539146 gaaaagctaaaataaagttcaattgttttcatataagctcttttcataagc 21539196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 34584295 - 34584369
Alignment:
Q  108 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc 182  Q
    ||||||||||| |||||||||||  ||||||||||||| |    || |||||||||||||||| |||||||||||    
T  34584295 cttatgtgtaatctatttttatattaaaagttaaaatatacactaactgttttcgtataagctgttttcataagc 34584369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 3785822 - 3785770
Alignment:
Q  118 agctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    |||||||||  ||| ||||| ||||||||||||||| ||||||||||||||||    
T  3785822 agctattttgctagcaaaagataaaataaagttaaactgttttcgtataagct 3785770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 160
Target Start/End: Original strand, 33117464 - 33117532
Alignment:
Q  92 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgtttt 160  Q
    |||||||| || ||||||||||  ||||||| |||||||| ||||  |||||| |||||||||||||||    
T  33117464 cttatcataataagcacttatgcataagctacttttatagcaaaatataaaattaagttaaattgtttt 33117532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 123 - 170
Target Start/End: Complemental strand, 28621227 - 28621180
Alignment:
Q  123 tttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||||  ||||| |||||||||||||||||||||| |||||||||    
T  28621227 tttttataacaaaagataaaataaagttaaattgtttttgtataagct 28621180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 116 - 175
Target Start/End: Complemental strand, 35070754 - 35070695
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagctttttt 175  Q
    |||||||||||||||| ||||| ||||||||| | ||||||||||  |||||||| ||||    
T  35070754 taagctatttttatagaaaaagataaaataaaataaaattgttttattataagctatttt 35070695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 24626241 - 24626291
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    |||||||||| ||||||||| | ||||| |||||||||||||||| |||||    
T  24626241 taagctatttctataggaaaggataaaacaaagttaaattgtttttgtata 24626291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 167
Target Start/End: Complemental strand, 24836330 - 24836272
Alignment:
Q  109 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataa 167  Q
    |||||| |||| ||||| ||||  ||||| ||||||||||| |||||||||||||||||    
T  24836330 ttatgtataagttatttctataacaaaagataaaataaagtcaaattgttttcgtataa 24836272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 31624007 - 31624085
Alignment:
Q  93 ttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagctt 171  Q
    ||||||||||  |||||||||||||||||||| | |||  ||| | ||| |||||||||||| ||||| ||||| ||||    
T  31624007 ttatcatgatacgcacttatgtgtaagctattctgataacaaaggataatataaagttaaatcgtttttgtataggctt 31624085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 208
Target Start/End: Original strand, 2455204 - 2455305
Alignment:
Q  109 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgtttt-cgtataagcttttttcataagc-gtcttggagaaattatgaaaataa 206  Q
    |||||| |||||||||| |||||  | || |||||||||| |||  |||||| |||||||||| |||||||| ||  |||||||||| || |||||||||    
T  2455204 ttatgtataagctatttctatagctatagataaaataaagctaagctgtttttcgtataagctgttttcatatgcaatcttggagaagttgtgaaaataa 2455303  T
Q  207 gc 208  Q
    ||    
T  2455304 gc 2455305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 173
Target Start/End: Complemental strand, 3217322 - 3217257
Alignment:
Q  108 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagctttt 173  Q
    ||||||| |||||||||||| || || ||| ||||||||||| ||||| ||||| |||||| ||||    
T  3217322 cttatgtataagctatttttgtaagagaagataaaataaagtcaaattattttcatataagatttt 3217257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 161
Target Start/End: Complemental strand, 11363492 - 11363447
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttc 161  Q
    ||||||||||||| | |||||| ||||||||||||||||| |||||    
T  11363492 taagctatttttaaaagaaaagataaaataaagttaaattattttc 11363447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 160
Target Start/End: Complemental strand, 30536682 - 30536638
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgtttt 160  Q
    |||||||||||||||| ||||| ||| |||| |||||||||||||    
T  30536682 taagctatttttatagcaaaagataagataacgttaaattgtttt 30536638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 34405051 - 34405095
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgtttt 160  Q
    |||||||||| ||||  ||||||||||||||||| ||||||||||    
T  34405051 taagctatttctataataaaagttaaaataaagtcaaattgtttt 34405095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 12425494 - 12425571
Alignment:
Q  93 ttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    |||||||||| | | ||||||| ||| |||||| ||||| ||||| ||||||||||||||||||||||||||||||||    
T  12425494 ttatcatgataaacgcttatgtataaactatttatatagtaaaagataaaataaagttaaattgttttcgtataagct 12425571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 465880 - 465966
Alignment:
Q  96 tcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc 182  Q
    ||||||| ||||||||| | |||||||||| |||   ||||| |||||||||||||||||||||| ||||||||| ||| |||||||    
T  465880 tcatgataagcacttatatataagctatttctatgacaaaagataaaataaagttaaattgtttttgtataagctgtttacataagc 465966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 11615454 - 11615519
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataag 181  Q
    |||||||||||||||  ||||| ||||||||||| ||||||||| |||||||||| ||||||||||    
T  11615454 taagctatttttataacaaaagataaaataaagtcaaattgtttacgtataagctgttttcataag 11615519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 92 - 230
Target Start/End: Original strand, 39105386 - 39105533
Alignment:
Q  92 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag-------cttttttcataagc-g 183  Q
    ||||||||||| ||| ||||||| |||||||||| |||||  |||  | |||| |||||||||||||||||||||||       || |||||||||||      
T  39105386 cttatcatgataagcgcttatgtataagctatttctatagctaaatatgaaatgaagttaaattgttttcgtataagctataatctgttttcataagcta 39105485  T
Q  184 tcttggagaaattatgaaaataagc-aaaaacagtttatcaacaatgt 230  Q
    |||||||||| |||||||||||||| ||||| || |||| ||||||||    
T  39105486 tcttggagaacttatgaaaataagctaaaaatagcttatgaacaatgt 39105533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 7674571 - 7674647
Alignment:
Q  93 ttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagc 169  Q
    |||||||||| ||||||||| | |||||||||| ||||  ||||| ||||||||| ||||||||||||| |||||||    
T  7674571 ttatcatgataagcacttatatataagctatttctataccaaaagataaaataaatttaaattgttttcttataagc 7674647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 42569128 - 42569050
Alignment:
Q  92 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||||||| ||| ||||||   ||||||||| ||||| ||||| |||||||||||  |||||||||||||||||||    
T  42569128 cttatcatgataagcgcttatgaaaaagctatttctatagcaaaagataaaataaagtctaattgttttcgtataagct 42569050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 93 - 169
Target Start/End: Complemental strand, 9202895 - 9202819
Alignment:
Q  93 ttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagc 169  Q
    |||||||||| ||  ||||| | |||||||||| | ||| ||||| ||||||||||||||||||||||| |||||||    
T  9202895 ttatcatgataagtgcttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataagc 9202819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 208
Target Start/End: Complemental strand, 4014569 - 4014448
Alignment:
Q  95 atcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcg-------tataagcttttttcataagc-gtct 186  Q
    |||||||| ||| | ||||| |||||||||| ||||| ||||| ||||||||||||| |||||||| |        ||||||| |||||||||||  |||    
T  4014569 atcatgataagcgcctatgtataagctatttctatagcaaaagataaaataaagttagattgtttttggaaaaatgataagctgttttcataagctatct 4014470  T
Q  187 tggagaaattatgaaaataagc 208  Q
    ||||||| ||||||||||||||    
T  4014469 tggagaacttatgaaaataagc 4014448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 170
Target Start/End: Original strand, 14932231 - 14932289
Alignment:
Q  111 atgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    |||| ||| |||||||||||| ||||| |||||||||||||||||||||| |||||||||    
T  14932231 atgtataatctatttttatagcaaaagataaaataaagttaaattgtttt-gtataagct 14932289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 28776893 - 28776955
Alignment:
Q  88 agcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagtt 150  Q
    ||||||||||||||| ||  ||||||| |||||||||||||| | ||||| ||||||||||||    
T  28776893 agcacttatcatgataagtgcttatgtataagctatttttattgaaaaagataaaataaagtt 28776955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 35446001 - 35446051
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    |||||||||||||||| ||| | |||||||||||||||||||||| |||||    
T  35446001 taagctatttttatagcaaatgataaaataaagttaaattgtttttgtata 35446051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 170
Target Start/End: Complemental strand, 3566468 - 3566388
Alignment:
Q  90 cacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||||||||| ||||||||  | |||||||||| ||||   ||||  |||||||||||||||| |||| |||||||||    
T  3566468 cacttatcatgataagcacttacctataagctatttctatacccaaagagaaaataaagttaaattatttttgtataagct 3566388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 160
Target Start/End: Complemental strand, 42500349 - 42500305
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgtttt 160  Q
    |||||||||||||||  ||||| ||||||||||||||||||||||    
T  42500349 taagctatttttatatcaaaagataaaataaagttaaattgtttt 42500305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 11835199 - 11835270
Alignment:
Q  92 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgt 163  Q
    ||||||||||| ||   |||||| ||| | |||||||||  ||||| |||||||||||||||||||||||||    
T  11835199 cttatcatgataagtgtttatgtataaaccatttttataacaaaagataaaataaagttaaattgttttcgt 11835270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 167
Target Start/End: Complemental strand, 37112390 - 37112331
Alignment:
Q  108 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataa 167  Q
    ||||||| |||||||||| || || ||||| ||||| |||||||||||||||| ||||||    
T  37112390 cttatgtataagctatttctacagcaaaagataaaacaaagttaaattgtttttgtataa 37112331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 3932809 - 3932759
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    |||||||||||||||| ||||| |||||| ||||| ||||||||| |||||    
T  3932809 taagctatttttatagcaaaagataaaatgaagtttaattgtttttgtata 3932759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 6096465 - 6096503
Alignment:
Q  92 cttatcatgatcagcacttatgtgtaagctatttttata 130  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  6096465 cttatcatgataagcacttatgtataagctatttttata 6096503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 7984969 - 7985015
Alignment:
Q  163 tataagcttttttcataagcg-tcttggagaaattatgaaaataagc 208  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||||    
T  7984969 tataagcttttttcataagctatcttggagaatttatgaaaataagc 7985015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 4855635 - 4855696
Alignment:
Q  107 acttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 168  Q
    |||||||| | |||||||||||||  ||||  |||||||||||||||||||| || ||||||    
T  4855635 acttatgtattagctatttttataacaaaaaataaaataaagttaaattgttatcatataag 4855696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 161
Target Start/End: Original strand, 10363696 - 10363741
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttc 161  Q
    |||||||||| ||||  ||||| |||||||||||||||||||||||    
T  10363696 taagctatttctataacaaaagataaaataaagttaaattgttttc 10363741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 11054124 - 11054196
Alignment:
Q  108 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataag 181  Q
    ||||||| |||||||||| ||||  ||||| |||||||||| ||| | ||||||||||||| | ||||||||||    
T  11054124 cttatgtataagctatttctataataaaagataaaataaag-taattagttttcgtataagatgttttcataag 11054196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 308
Target Start/End: Original strand, 42646792 - 42646829
Alignment:
Q  271 tagataagctcatgtaagtcaatccaaacataccctta 308  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  42646792 tagataagctcaagtaagtcaatccaaacagaccctta 42646829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 5963434 - 5963362
Alignment:
Q  88 agcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgtttt 160  Q
    |||| |||||||||| ||| |||||||  || |||||| ||||   |||| ||||||||||||||||||||||    
T  5963434 agcatttatcatgataagcgcttatgtacaaactatttctataatgaaagataaaataaagttaaattgtttt 5963362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 9107058 - 9107102
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgtttt 160  Q
    ||||||||||||| || ||||| ||||||||||||||||| ||||    
T  9107058 taagctatttttaaagaaaaagataaaataaagttaaattatttt 9107102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 19460534 - 19460466
Alignment:
Q  92 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgtttt 160  Q
    ||||||||||| ||||||||||| ||| |||||| ||||  ||||  |  |||||||||||||||||||    
T  19460534 cttatcatgataagcacttatgtataaactatttctatatcaaaacattgaataaagttaaattgtttt 19460466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 39594754 - 39594805
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 168  Q
    |||||||||| ||||| ||||| |||||||||| ||||||||||||| |||||    
T  39594754 taagctatttctatagaaaaagataaaataaag-taaattgttttcgcataag 39594805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 170
Target Start/End: Original strand, 41819532 - 41819612
Alignment:
Q  90 cacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||||||||| |||  || ||| |||||||||| ||||    ||| ||||||||| |||||||||||| |||||||||    
T  41819532 cacttatcatgatgagcggttttgtataagctatttctataatggaagataaaataaatttaaattgtttttgtataagct 41819612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 3155525 - 3155603
Alignment:
Q  92 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||||||| ||||  ||||| |||||||||| ||||| ||||| |||||||||||||||||||||| ||| |||||    
T  3155525 cttatcatgataagcatgtatgtataagctatttctatagcaaaagataaaataaagttaaattgtttttgtacaagct 3155603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 170
Target Start/End: Original strand, 1706542 - 1706622
Alignment:
Q  90 cacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||| ||||||| ||  |||||||  ||||||||||||||| |||||||||||||| ||| ||||||||||||| |||||    
T  1706542 cacttttcatgataagtgcttatgtagaagctatttttatagaaaaagttaaaataatgttcaattgttttcgtagaagct 1706622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 51630033 - 51630111
Alignment:
Q  92 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||| ||||| ||||||| |||  ||||||||| ||||| ||||| ||||||||||||||||||||||  ||||||||    
T  51630033 cttattatgataagcacttgtgttcaagctatttatatagcaaaagataaaataaagttaaattgttttgatataagct 51630111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 17884009 - 17884066
Alignment:
Q  111 atgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 168  Q
    ||||||||||||||| ||||  ||||| |||||||||||||||||||||| |||||||    
T  17884009 atgtgtaagctatttctataacaaaagataaaataaagttaaattgtttttgtataag 17884066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 26520376 - 26520299
Alignment:
Q  93 ttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    |||||||||| ||||||||||| ||| || ||| ||||  ||||| | ||||||||||||||||||||||| ||||||    
T  26520376 ttatcatgataagcacttatgtataaactgtttctataacaaaagatgaaataaagttaaattgttttcgtgtaagct 26520299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 25885795 - 25885859
Alignment:
Q  106 cacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||||| | |||| ||| ||||| ||||| ||||||||||||||||||||||||| ||||||    
T  25885795 cacttatgtattagctctttctatagcaaaagataaaataaagttaaattgttttcgtgtaagct 25885859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 47800593 - 47800669
Alignment:
Q  133 aaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc-gtcttggagaaattatgaaaataagc 208  Q
    ||||| ||||||||||||||| |||||| ||||||||| |||||||||||  ||||| |||  ||||||||||||||    
T  47800593 aaaagataaaataaagttaaaatgtttttgtataagctgttttcataagctatcttgaagagcttatgaaaataagc 47800669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 168
Target Start/End: Complemental strand, 437565 - 437504
Alignment:
Q  108 cttatgtgtaagctattttt-ataggaaaagttaaaataaagttaaattgttttcgtataag 168  Q
    ||||||| |||||||||||| |||| ||||| ||||||||||||||||||| ||| ||||||    
T  437565 cttatgtataagctattttttatagcaaaagataaaataaagttaaattgtgttcatataag 437504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 50662880 - 50662815
Alignment:
Q  92 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgt 157  Q
    ||||||||||| |||  |||||| |||||||||||||||| | ||| |||||||| ||||||||||    
T  50662880 cttatcatgatgagcgtttatgtataagctatttttatagcataagataaaataatgttaaattgt 50662815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 50681212 - 50681163
Alignment:
Q  117 aagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    ||||||||||||||||| ||| |||||||| ||||||||||||| |||||    
T  50681212 aagctatttttataggataagataaaataatgttaaattgtttttgtata 50681163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 43505902 - 43505946
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgtttt 160  Q
    |||||||||||||||| ||||| |||||||| |||||||||||||    
T  43505902 taagctatttttatagcaaaagataaaataacgttaaattgtttt 43505946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 155
Target Start/End: Original strand, 6364071 - 6364134
Alignment:
Q  92 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaatt 155  Q
    ||||||| ||| ||||||||||| |||||||||| ||||  ||||| ||||||||||| |||||    
T  6364071 cttatcaagataagcacttatgtataagctatttctataacaaaagataaaataaagtgaaatt 6364134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 170
Target Start/End: Complemental strand, 27043931 - 27043900
Alignment:
Q  139 taaaataaagttaaattgttttcgtataagct 170  Q
    ||||||||||||||||||||||||||||||||    
T  27043931 taaaataaagttaaattgttttcgtataagct 27043900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 49004118 - 49004042
Alignment:
Q  92 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||| ||||| ||| ||||||| ||||| |||| ||||| ||||| |||||||  |||||||||||||||||| ||||    
T  49004118 cttataatgataagcgcttatgtataagcaatttctatagcaaaagataaaata--gttaaattgttttcgtattagct 49004042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 7601697 - 7601755
Alignment:
Q  108 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    ||||||| |||||||||  ||||| ||| | |||||||||||||||||||||| |||||    
T  7601697 cttatgtataagctattcctatagcaaaggataaaataaagttaaattgtttttgtata 7601755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 17204084 - 17204134
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    |||||| ||||||||| ||| ||||||||||||||| |||||||| |||||    
T  17204084 taagctgtttttatagcaaatgttaaaataaagttatattgtttttgtata 17204134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 22539154 - 22539116
Alignment:
Q  140 aaaataaagttaaattgttttcgtataagcttttttcat 178  Q
    ||||||||||||||||||||| ||||||||| |||||||    
T  22539154 aaaataaagttaaattgttttagtataagctattttcat 22539116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 182
Target Start/End: Complemental strand, 22684640 - 22684574
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc 182  Q
    |||||||||| ||||  ||| | ||||||||||| ||||||||||| |||||||| || ||||||||    
T  22684640 taagctatttctataacaaacggtaaaataaagtcaaattgttttcatataagctgttctcataagc 22684574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 23459578 - 23459628
Alignment:
Q  120 ctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    |||||||||||| ||||| |||||| ||||||| |||||||| ||||||||    
T  23459578 ctatttttatagcaaaagataaaatgaagttaagttgttttcttataagct 23459628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 41336707 - 41336756
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    |||||||||||||||| ||| | |||||||||||||||||||||| |||||    
T  41336707 taagctatttttatagcaaa-gataaaataaagttaaattgtttttgtata 41336756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 44138497 - 44138555
Alignment:
Q  108 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    ||||||| |||||| ||| ||||| | ||| |||||||||||||||||| |||||||||    
T  44138497 cttatgtataagctgtttctatagcagaagataaaataaagttaaattgctttcgtata 44138555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 153
Target Start/End: Original strand, 2733238 - 2733303
Alignment:
Q  88 agcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaa 153  Q
    ||||||| |||||||  |||||||||| ||||| ||||||||   ||||| |||||||||||||||    
T  2733238 agcacttgtcatgatatgcacttatgtataagcaatttttatgaaaaaagataaaataaagttaaa 2733303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 25332725 - 25332774
Alignment:
Q  121 tatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||| ||||| ||||||| |||| ||||||||||||||| |||||||||    
T  25332725 tatttctatagtaaaagttgaaatgaagttaaattgtttttgtataagct 25332774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 25904334 - 25904285
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtat 165  Q
    ||||||||||||| || ||||| |||||||||||||||||| ||| ||||    
T  25904334 taagctatttttacagcaaaagataaaataaagttaaattgattttgtat 25904285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 169
Target Start/End: Original strand, 44249208 - 44249285
Alignment:
Q  92 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagc 169  Q
    ||||||||||| |||| |||||| |||| |||||  |||  ||||| ||||| ||||||||||| ||| |||||||||    
T  44249208 cttatcatgataagcaattatgtataagttatttcaataacaaaagataaaacaaagttaaattatttccgtataagc 44249285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 52326240 - 52326179
Alignment:
Q  109 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    |||||| ||||||||||| ||   ||||| |||||||||||||||||||| | |||||||||    
T  52326240 ttatgtataagctattttaatgataaaagataaaataaagttaaattgttgttgtataagct 52326179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 2987112 - 2987196
Alignment:
Q  93 ttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttca 177  Q
    |||||||||| ||||||||| | |||||||||| || |  ||||  ||||||||||||||  |||||  ||||||||| ||||||    
T  2987112 ttatcatgataagcacttatttataagctatttctacaacaaaaaataaaataaagttaagatgtttatgtataagctattttca 2987196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 161
Target Start/End: Complemental strand, 13216323 - 13216283
Alignment:
Q  121 tatttttataggaaaagttaaaataaagttaaattgttttc 161  Q
    ||||||||||| ||||| |||||||||||||||| ||||||    
T  13216323 tatttttatagcaaaagataaaataaagttaaatcgttttc 13216283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 20907112 - 20907164
Alignment:
Q  109 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttc 161  Q
    |||||| |||||||||| |||| |||||| ||||||||||| ||| |||||||    
T  20907112 ttatgtataagctatttgtataagaaaagataaaataaagtgaaactgttttc 20907164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 149
Target Start/End: Original strand, 21193937 - 21193977
Alignment:
Q  109 ttatgtgtaagctatttttataggaaaagttaaaataaagt 149  Q
    |||||| |||||||||||||||| ||||| |||||||||||    
T  21193937 ttatgtataagctatttttatagtaaaagataaaataaagt 21193977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 182
Target Start/End: Complemental strand, 41701563 - 41701499
Alignment:
Q  118 agctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc 182  Q
    |||||||| ||||  ||||| ||||||||||| |||| |||||| |||||||| |||| ||||||    
T  41701563 agctatttatataacaaaagataaaataaagtcaaatcgttttcatataagctgttttaataagc 41701499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 44863114 - 44863042
Alignment:
Q  88 agcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgtttt 160  Q
    ||||||| ||||||| ||  ||||||  |||||||||||||||| ||||| ||| ||||  ||||||||||||    
T  44863114 agcacttgtcatgataagtgcttatgcataagctatttttatagaaaaaggtaagataacattaaattgtttt 44863042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 166
Target Start/End: Complemental strand, 42420442 - 42420368
Alignment:
Q  92 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    ||||||||||| ||| |||| || |||||||||||||||| ||||| |||||||| ||||||||||||| |||||    
T  42420442 cttatcatgataagcgcttacgtataagctatttttatagcaaaagataaaataacgttaaattgtttttgtata 42420368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 170
Target Start/End: Original strand, 42457872 - 42457948
Alignment:
Q  94 tatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||||| |||| |||||| ||| |||||| ||||| ||||| |||||||||||||||||||||| || ||||||    
T  42457872 tatcatgataagcatttatgtataatctatttctatagtaaaagataaaataaagttaaattgtttttgtttaagct 42457948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 108 - 230
Target Start/End: Original strand, 3611164 - 3611295
Alignment:
Q  108 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtata------ag-cttttttcataagc-gtcttggagaaattatg 199  Q
    ||||||| |||| ||||| ||||| ||||| |||||||||||||||||||||| |||||      || || |||||| ||||  |||||||||| |||||    
T  3611164 cttatgtataagttatttctatagcaaaaggtaaaataaagttaaattgtttttgtatagtttatagactgttttcacaagctatcttggagaacttatg 3611263  T
Q  200 aaaataagc-aaaaacagtttatcaacaatgt 230  Q
    ||||||||| ||||||||||||| || |||||    
T  3611264 aaaataagctaaaaacagtttatgaataatgt 3611295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 160
Target Start/End: Original strand, 4026739 - 4026807
Alignment:
Q  92 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgtttt 160  Q
    ||||||||||| ||  ||||| | |||||||||||||||| ||||| ||||||||||||||||| ||||    
T  4026739 cttatcatgataagtgcttatctataagctatttttatagcaaaagataaaataaagttaaattatttt 4026807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 39567825 - 39567892
Alignment:
Q  92 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttt 159  Q
    ||||||||||| ||||||| ||| |||| ||||| ||||  ||||| |||||||||||||||||||||    
T  39567825 cttatcatgataagcacttgtgtataagatatttctataacaaaagataaaataaagttaaattgttt 39567892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 18962170 - 18962108
Alignment:
Q  108 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||| | |||||||||||||  ||||| ||||||||||||||| ||||||| ||||||||    
T  18962170 cttatgtattagctatttttataacaaaagataaaataaagttaaactgttttcatataagct 18962108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 170
Target Start/End: Original strand, 25609734 - 25609796
Alignment:
Q  108 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||| |||||||||| |||| |||||| ||||||||||| || || ||||||||||||||    
T  25609734 cttatgtataagctatttctataagaaaagataaaataaagtcaatttattttcgtataagct 25609796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 170
Target Start/End: Original strand, 28902015 - 28902077
Alignment:
Q  108 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||| |||||||||||||||  | ||||||||||||| ||||| ||||||| ||||||||    
T  28902015 cttatgtataagctatttttataacataagttaaaataaaattaaactgttttcatataagct 28902077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 35459856 - 35459910
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    |||||||||| ||||  ||||| ||||||||||| ||||||||||||||||||||    
T  35459856 taagctatttgtataccaaaagataaaataaagtcaaattgttttcgtataagct 35459910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 41241256 - 41241206
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    |||||||||| ||||||||||| |||||| ||||||||||||||| |||||    
T  41241256 taagctatttctataggaaaagataaaatgaagttaaattgtttttgtata 41241206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 42868585 - 42868535
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||| |||||    
T  42868585 taagctattttcatagaaaaagataaaataaagttaaattgtttttgtata 42868535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 300
Target Start/End: Complemental strand, 40672791 - 40672750
Alignment:
Q  259 tcttccaaacaatagataagctcatgtaagtcaatccaaaca 300  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  40672791 tcttccaaacaatagataagctcaattaagtcaatccaaaca 40672750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 10619337 - 10619293
Alignment:
Q  118 agctatttttataggaaaagttaaaataaagttaaattgttttcg 162  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||||    
T  10619337 agctatttttatagaaaaagataaaacaaagttaaattgttttcg 10619293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 16451088 - 16451164
Alignment:
Q  133 aaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc-gtcttggagaaattatgaaaataagc 208  Q
    ||||| |||||| |||||||||||||||| |||||||| ||||| |||||  |||||||||| |  |||||||||||    
T  16451088 aaaagataaaatgaagttaaattgttttcatataagctgttttcgtaagctatcttggagaactcgtgaaaataagc 16451164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 165
Target Start/End: Original strand, 23747227 - 23747299
Alignment:
Q  93 ttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtat 165  Q
    |||| ||||| | ||||||||| |||||||||||||||  ||||| |||||| || ||||||| |||||||||    
T  23747227 ttatgatgataaacacttatgtataagctatttttatatcaaaagataaaatgaatttaaattattttcgtat 23747299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 26143792 - 26143717
Alignment:
Q  88 agcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgta 164  Q
    |||||||| |||||| ||||||| ||| |||||||||| ||||| ||||| |||||||||||| |||| | ||||||    
T  26143792 agcacttaccatgat-agcacttgtgtataagctatttctatagcaaaagataaaataaagttcaattatattcgta 26143717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 175
Target Start/End: Original strand, 44600459 - 44600546
Alignment:
Q  90 cacttatcatgatcagcacttatgtgtaagctatttttatagg--aaaagttaaaataaagttaaattgttttcgtataagctttttt 175  Q
    |||||||| |||| ||  ||||||| |||||||||| |||||   ||||| |||||||||||||||| |||||| |||||||| ||||    
T  44600459 cacttatcgtgataagtgcttatgtataagctatttctatagccaaaaagataaaataaagttaaatagttttcatataagctgtttt 44600546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 9395052 - 9395127
Alignment:
Q  92 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataa 167  Q
    ||||||||||| | |||| |||| |||| | ||| ||||| ||||| |||||||||| |||||||||||| |||||    
T  9395052 cttatcatgataaacactcatgtataagatttttctatagaaaaagataaaataaagctaaattgttttcatataa 9395127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 13220378 - 13220438
Alignment:
Q  94 tatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgtt 158  Q
    ||||||||| |||||||||    ||||||||| ||||| ||||||||||||||||||| ||||||    
T  13220378 tatcatgataagcacttat----aagctatttctatagaaaaagttaaaataaagttagattgtt 13220438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 34339841 - 34339904
Alignment:
Q  105 gcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 168  Q
    ||||||||||||||| | |||||| |  ||||| ||||||||||| ||||| ||||||||||||    
T  34339841 gcacttatgtgtaagttgtttttaaaacaaaagataaaataaagtcaaattattttcgtataag 34339904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 12464597 - 12464547
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    |||||||||| | ||| ||||| |||||||||||||||||||||| |||||    
T  12464597 taagctatttctgtagaaaaagataaaataaagttaaattgtttttgtata 12464547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 13325516 - 13325566
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    ||||||| |||||||| ||| | ||||||||||||||||| ||||||||||    
T  13325516 taagctagttttatagaaaatgataaaataaagttaaattattttcgtata 13325566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 36114342 - 36114419
Alignment:
Q  93 ttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    |||||||||| ||  ||||| | | ||||||||||||   ||||| |||||||||||||||||||||| |||| ||||    
T  36114342 ttatcatgataagtgcttatatattagctatttttatgacaaaagataaaataaagttaaattgtttttgtattagct 36114419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 166
Target Start/End: Original strand, 41851486 - 41851531
Alignment:
Q  121 tatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    ||||| ||||||||||| || ||||||||||||||||||| |||||    
T  41851486 tatttatataggaaaagatacaataaagttaaattgtttttgtata 41851531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 170
Target Start/End: Original strand, 42907286 - 42907359
Alignment:
Q  97 catgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    |||||| ||||||||  | |||||||||| ||||  | |||  |||||||||||||||||||||||| ||||||    
T  42907286 catgataagcacttacatataagctatttctataacagaagaaaaaataaagttaaattgttttcgtttaagct 42907359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 44119722 - 44119775
Alignment:
Q  108 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttc 161  Q
    ||||||| |||| ||||||||||| ||||| |||||||||||||| || |||||    
T  44119722 cttatgtataagttatttttatagtaaaagataaaataaagttaattttttttc 44119775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 160
Target Start/End: Original strand, 32592537 - 32592577
Alignment:
Q  120 ctatttttataggaaaagttaaaataaagttaaattgtttt 160  Q
    |||||||||||| ||||| |||||||| |||||||||||||    
T  32592537 ctatttttatagaaaaagataaaataatgttaaattgtttt 32592577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 36114630 - 36114594
Alignment:
Q  133 aaaagttaaaataaagttaaattgttttcgtataagc 169  Q
    ||||| |||||||||||||||||||||| ||||||||    
T  36114630 aaaagataaaataaagttaaattgtttttgtataagc 36114594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 160
Target Start/End: Original strand, 40009391 - 40009460
Alignment:
Q  91 acttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgtttt 160  Q
    |||||||||||| ||| ||||||| |||||| ||||||||  |||||  |||||||||||||||||||||    
T  40009391 acttatcatgattagcgcttatgtataagctgtttttataacaaaagacaaaataaagttaaattgtttt 40009460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 26935678 - 26935610
Alignment:
Q  112 tgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataa 180  Q
    |||||||||||||||||||  ||| | |||||||| |||||||||||||| ||| |||| |||||||||    
T  26935678 tgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataa 26935610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 168
Target Start/End: Complemental strand, 28613665 - 28613606
Alignment:
Q  109 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 168  Q
    |||||| |||||||||||||||  ||||| ||||| |||||||||||||||| |||||||    
T  28613665 ttatgtataagctatttttataacaaaagataaaacaaagttaaattgtttttgtataag 28613606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 172
Target Start/End: Original strand, 30133988 - 30134051
Alignment:
Q  109 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttt 172  Q
    |||||| ||||||||||||| |  ||||| ||||||||||| || |||||||||||||||||||    
T  30133988 ttatgtataagctatttttacaacaaaagataaaataaagtcaacttgttttcgtataagcttt 30134051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 170
Target Start/End: Complemental strand, 20881788 - 20881706
Alignment:
Q  88 agcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||||||||||| ||| ||||||| | |||||| | ||||| ||||| |||||  |||||||||||||| |||| |||||    
T  20881788 agcacttatcatgataagctcttatgtatgagctatatctatagcaaaagataaaacgaagttaaattgtttccgtacaagct 20881706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 170
Target Start/End: Original strand, 30180009 - 30180051
Alignment:
Q  128 ataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    |||| ||||| ||||||||||||||||||||||||||||||||    
T  30180009 atagcaaaagataaaataaagttaaattgttttcgtataagct 30180051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 119856 - 119899
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttt 159  Q
    |||||||||| || |||||||| |||||||||||||||||||||    
T  119856 taagctatttctacaggaaaagataaaataaagttaaattgttt 119899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 119 - 170
Target Start/End: Complemental strand, 40689107 - 40689056
Alignment:
Q  119 gctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||| ||||| ||||| ||||||||||||||||| ||||| ||||||||    
T  40689107 gctatttctatagcaaaagataaaataaagttaaattattttcatataagct 40689056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 36874101 - 36874035
Alignment:
Q  104 agcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||||||| |||||||||| |||| |||| | ||||||||| || |||| ||||| ||||||||    
T  36874101 agcacttatgtataagctatttctataagaaatgataaaataaatttgaattattttcttataagct 36874035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 39393647 - 39393589
Alignment:
Q  163 tataagcttttttcataagcgtcttggagaaattatgaaaataagcaaaaacagtttat 221  Q
    |||||| |||||||||||||   |||||||| |||||||||||||| ||||||| ||||    
T  39393647 tataagtttttttcataagctatttggagaacttatgaaaataagctaaaacagcttat 39393589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 45806450 - 45806408
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgtt 158  Q
    |||||||||||||||| ||||| |||||||| |||||||||||    
T  45806450 taagctatttttatagcaaaagataaaataacgttaaattgtt 45806408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 46078093 - 46078143
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 166  Q
    |||| ||||||||||| ||||| ||||| |||||||||||||||| |||||    
T  46078093 taagttatttttatagaaaaagataaaacaaagttaaattgtttttgtata 46078143  T

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Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 170
Target Start/End: Original strand, 22759125 - 22759186
Alignment:
Q  109 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    |||||| |||||||||| ||||  ||||| ||||||||||  ||||||||||| ||||||||    
T  22759125 ttatgtttaagctatttgtataacaaaagataaaataaaggaaaattgttttcatataagct 22759186  T

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Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 308
Target Start/End: Complemental strand, 33266434 - 33266397
Alignment:
Q  271 tagataagctcatgtaagtcaatccaaacataccctta 308  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  33266434 tagataagctcaaataagtcaatccaaacataccctta 33266397  T

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Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 34083644 - 34083595
Alignment:
Q  121 tatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||| ||||| ||||| |||||||||||||||||||||  |||||||||    
T  34083644 tatttctatagcaaaagataaaataaagttaaattgtttgtgtataagct 34083595  T

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Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 157
Target Start/End: Original strand, 45004716 - 45004753
Alignment:
Q  120 ctatttttataggaaaagttaaaataaagttaaattgt 157  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  45004716 ctatttttatagcaaaagataaaataaagttaaattgt 45004753  T

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Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 1417203 - 1417263
Alignment:
Q  109 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagc 169  Q
    |||||| ||| |||||| ||||  ||||| ||||||||||| ||||||||||| |||||||    
T  1417203 ttatgtataaactatttatataacaaaagataaaataaagtcaaattgttttcatataagc 1417263  T

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Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 8094234 - 8094270
Alignment:
Q  134 aaagttaaaataaagttaaattgttttcgtataagct 170  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  8094234 aaagttaaaataaagttaaattggtttggtataagct 8094270  T

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Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 168
Target Start/End: Original strand, 35536045 - 35536105
Alignment:
Q  108 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 168  Q
    ||||||| |||||||||| ||||  | ||| ||||||||||| ||||||||||| ||||||    
T  35536045 cttatgtataagctatttctataacataagataaaataaagtcaaattgttttcatataag 35536105  T

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Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 160
Target Start/End: Complemental strand, 43153026 - 43152982
Alignment:
Q  116 taagctatttttataggaaaagttaaaataaagttaaattgtttt 160  Q
    |||||||||| ||||  ||||| ||||||||||||||||||||||    
T  43153026 taagctatttctataacaaaagataaaataaagttaaattgtttt 43152982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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