View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21687_high_26 (Length: 312)
Name: NF21687_high_26
Description: NF21687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21687_high_26 |
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Alignment Details
Target: chr4 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 68 - 279
Target Start/End: Original strand, 2264320 - 2264532
Alignment:
| Q |
68 |
tgtataactctctgtacataaactagccatacacgccataatgaaattccaattcaagtagtcccaaatgttgatgtatatattgatttaacattttcnn |
167 |
Q |
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| T |
2264320 |
tgtataactctctgtacataaactagctatacacgccataatgaaattccaattcaagtagtcccaaatgttgatgtatatattgatttaacattttctt |
2264419 |
T |
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| Q |
168 |
nnnnng-aaaagattaatggtgtgtttggttgagcatccacagtacaaattattgcgtttctatacaaatattatcgcagttttgagaagttttaaaact |
266 |
Q |
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| T |
2264420 |
tttttgaaaaagattaatggtgtgtttggttgagcattctcagtacaaattattgcatttctatacaaatattgtcgcagttttgagaagttttaaaact |
2264519 |
T |
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| Q |
267 |
aagcttttgcatt |
279 |
Q |
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||||||||||||| |
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| T |
2264520 |
aagcttttgcatt |
2264532 |
T |
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