View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2168_high_12 (Length: 279)
Name: NF2168_high_12
Description: NF2168
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2168_high_12 |
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Alignment Details
Target: chr2 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 16 - 272
Target Start/End: Complemental strand, 11832153 - 11831896
Alignment:
| Q |
16 |
attcatgaaagtaaaatcctctcaaatagaattatttgatactcatttaatgcactgtatggcaaatacttggaccgtcttcaatcttcttatctaaaga |
115 |
Q |
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| T |
11832153 |
attcatgaaagtaaaatcctctcaaatagaattatttgatactcatttaatgcactgtatggcaaatacttggaccgtcttcaatcttctaacctaaaga |
11832054 |
T |
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| Q |
116 |
gtatagtaaagaaaaataagacttgat-agtgaagaggacaacacaggagaggatctagatgcaaatatatgtagtatgcatgcgtgataggtggggtcg |
214 |
Q |
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| T |
11832053 |
gtatagtaaagaaaaataagacttgattagtgaagaggactacacaggagaggatccagatgcaaatatatgtagtatgcatgcgtgataggtggggtcg |
11831954 |
T |
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| Q |
215 |
tggagtttgtgtgtcttcaccaaatcttgtggctatttttgtctttaaattcttctca |
272 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11831953 |
tggagtttgtgtgtcttcaccaaatcttgtggctatttttgtctttaaattcttctca |
11831896 |
T |
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