View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2168_low_5 (Length: 432)

Name: NF2168_low_5
Description: NF2168
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2168_low_5
NF2168_low_5
[»] chr5 (44 HSPs)
chr5 (246-424)||(2865124-2865302)
chr5 (248-424)||(5819298-5819474)
chr5 (245-424)||(18183338-18183517)
chr5 (246-424)||(8460928-8461106)
chr5 (248-416)||(8647438-8647606)
chr5 (248-424)||(19359136-19359312)
chr5 (247-415)||(29455120-29455288)
chr5 (244-419)||(14215617-14215792)
chr5 (246-424)||(24362205-24362383)
chr5 (245-424)||(15708968-15709146)
chr5 (245-424)||(164560-164739)
chr5 (245-415)||(15372251-15372421)
chr5 (247-424)||(16018588-16018763)
chr5 (246-408)||(19359520-19359683)
chr5 (246-408)||(5818927-5819090)
chr5 (246-408)||(18182968-18183131)
chr5 (245-408)||(8647822-8647986)
chr5 (247-410)||(25000471-25000635)
chr5 (246-413)||(14463901-14464067)
chr5 (247-408)||(8461315-8461477)
chr5 (250-424)||(24331929-24332107)
chr5 (254-408)||(24361843-24361997)
chr5 (270-415)||(25000112-25000257)
chr5 (248-407)||(164191-164350)
chr5 (250-408)||(2864756-2864915)
chr5 (254-408)||(24325218-24325372)
chr5 (250-408)||(14215243-14215402)
chr5 (245-408)||(24331556-24331722)
chr5 (247-408)||(29454739-29454901)
chr5 (248-388)||(7349422-7349562)
chr5 (246-410)||(16018969-16019134)
chr5 (249-368)||(4222147-4222266)
chr5 (248-408)||(15709353-15709513)
chr5 (248-389)||(4623148-4623287)
chr5 (250-361)||(15371873-15371983)
chr5 (248-386)||(4219663-4219800)
chr5 (248-374)||(7348559-7348685)
chr5 (254-386)||(6019177-6019309)
chr5 (261-387)||(4624631-4624757)
chr5 (249-387)||(6018315-6018452)
chr5 (299-388)||(13814133-13814226)
chr5 (327-408)||(14462683-14462769)
chr5 (336-408)||(10721873-10721945)
chr5 (378-408)||(14340793-14340823)
[»] chr1 (40 HSPs)
chr1 (247-424)||(50970647-50970824)
chr1 (247-417)||(5540194-5540364)
chr1 (246-424)||(18984117-18984295)
chr1 (247-417)||(15646571-15646741)
chr1 (248-417)||(29306953-29307122)
chr1 (247-424)||(29869619-29869796)
chr1 (250-425)||(33144287-33144462)
chr1 (251-424)||(5962947-5963120)
chr1 (251-424)||(15173099-15173272)
chr1 (248-424)||(8678911-8679086)
chr1 (245-424)||(9018970-9019149)
chr1 (248-424)||(21856412-21856588)
chr1 (248-424)||(17433216-17433392)
chr1 (248-417)||(29307317-29307487)
chr1 (250-424)||(39154021-39154195)
chr1 (246-415)||(26859438-26859606)
chr1 (245-417)||(9019338-9019511)
chr1 (250-410)||(17433597-17433758)
chr1 (246-406)||(50970276-50970437)
chr1 (248-408)||(29870003-29870164)
chr1 (247-388)||(52268289-52268430)
chr1 (249-408)||(5539817-5539977)
chr1 (249-365)||(8678542-8678658)
chr1 (245-408)||(21856039-21856203)
chr1 (249-407)||(4636356-4636515)
chr1 (246-408)||(15173478-15173640)
chr1 (247-374)||(18984538-18984665)
chr1 (247-408)||(39154404-39154566)
chr1 (256-408)||(33143925-33144078)
chr1 (246-408)||(15646190-15646353)
chr1 (248-365)||(26859059-26859176)
chr1 (249-408)||(5962579-5962739)
chr1 (308-419)||(4636033-4636143)
chr1 (250-364)||(52269177-52269291)
chr1 (245-334)||(2733416-2733505)
chr1 (239-348)||(47827033-47827141)
chr1 (248-408)||(17112282-17112442)
chr1 (250-323)||(47826966-47827039)
chr1 (248-328)||(50419726-50419806)
chr1 (384-418)||(17088516-17088550)
[»] chr4 (62 HSPs)
chr4 (246-418)||(25447611-25447783)
chr4 (245-424)||(12234326-12234505)
chr4 (250-424)||(46193774-46193948)
chr4 (250-417)||(38962195-38962362)
chr4 (245-424)||(51020794-51020973)
chr4 (247-425)||(15523602-15523780)
chr4 (250-416)||(33109686-33109852)
chr4 (248-424)||(11153516-11153692)
chr4 (245-417)||(25937667-25937839)
chr4 (245-424)||(22434547-22434724)
chr4 (247-424)||(22170306-22170482)
chr4 (250-415)||(23494445-23494610)
chr4 (250-424)||(4219559-4219733)
chr4 (251-424)||(2118665-2118837)
chr4 (247-424)||(48526195-48526371)
chr4 (242-408)||(20470895-20471062)
chr4 (245-424)||(45082429-45082606)
chr4 (248-410)||(46193405-46193568)
chr4 (246-424)||(54995437-54995614)
chr4 (248-408)||(22434179-22434340)
chr4 (248-408)||(25447247-25447408)
chr4 (245-364)||(23494872-23494991)
chr4 (246-407)||(15523233-15523395)
chr4 (248-408)||(45082808-45082969)
chr4 (245-408)||(4219943-4220107)
chr4 (246-408)||(54995067-54995230)
chr4 (248-408)||(12234713-12234874)
chr4 (251-408)||(48526565-48526723)
chr4 (246-374)||(33109883-33110011)
chr4 (247-374)||(25938090-25938217)
chr4 (247-408)||(11153145-11153307)
chr4 (245-362)||(18763951-18764068)
chr4 (316-424)||(12503805-12503913)
chr4 (246-408)||(51021180-51021342)
chr4 (251-408)||(18751602-18751760)
chr4 (250-374)||(2118295-2118419)
chr4 (249-388)||(20958266-20958403)
chr4 (249-388)||(44892553-44892692)
chr4 (248-365)||(35363028-35363146)
chr4 (246-388)||(48293592-48293734)
chr4 (248-388)||(48294947-48295088)
chr4 (270-388)||(43243686-43243803)
chr4 (246-384)||(48708293-48708431)
chr4 (246-388)||(48713751-48713893)
chr4 (249-388)||(44890518-44890657)
chr4 (251-384)||(16690939-16691072)
chr4 (265-408)||(12503453-12503597)
chr4 (270-386)||(43281198-43281313)
chr4 (247-374)||(10258306-10258433)
chr4 (255-386)||(20957196-20957327)
chr4 (306-388)||(43242328-43242410)
chr4 (248-384)||(16691481-16691616)
chr4 (247-318)||(16318251-16318322)
chr4 (357-424)||(18751971-18752038)
chr4 (238-424)||(17503964-17504149)
chr4 (248-356)||(55189528-55189636)
chr4 (309-388)||(44220782-44220861)
chr4 (384-424)||(17504329-17504369)
chr4 (384-424)||(35193443-35193483)
chr4 (248-388)||(30597926-30598065)
chr4 (391-424)||(40160236-40160269)
chr4 (251-386)||(55191181-55191318)
[»] scaffold0295 (2 HSPs)
scaffold0295 (245-424)||(4790-4969)
scaffold0295 (250-362)||(5222-5334)
[»] chr6 (35 HSPs)
chr6 (246-425)||(20741098-20741277)
chr6 (248-424)||(10900299-10900475)
chr6 (248-424)||(11276951-11277127)
chr6 (246-416)||(18257135-18257305)
chr6 (247-424)||(15828010-15828187)
chr6 (245-424)||(28472634-28472812)
chr6 (245-424)||(29859823-29860001)
chr6 (246-419)||(12935531-12935704)
chr6 (249-417)||(31470692-31470860)
chr6 (245-408)||(2319669-2319832)
chr6 (245-424)||(11444984-11445163)
chr6 (248-419)||(1149805-1149977)
chr6 (251-417)||(10899942-10900109)
chr6 (251-424)||(2322588-2322760)
chr6 (245-408)||(12935154-12935318)
chr6 (249-424)||(18505288-18505463)
chr6 (245-408)||(11445371-11445535)
chr6 (245-408)||(22219737-22219901)
chr6 (246-408)||(23075512-23075675)
chr6 (247-415)||(23073998-23074155)
chr6 (248-411)||(4811372-4811535)
chr6 (251-408)||(18504922-18505080)
chr6 (247-408)||(31470314-31470476)
chr6 (248-408)||(18257521-18257682)
chr6 (247-408)||(20741485-20741650)
chr6 (247-417)||(11276589-11276760)
chr6 (250-388)||(29033436-29033575)
chr6 (251-384)||(3835135-3835268)
chr6 (249-374)||(15827639-15827766)
chr6 (250-388)||(29035042-29035180)
chr6 (245-388)||(18296142-18296284)
chr6 (246-336)||(1149463-1149553)
chr6 (248-374)||(4811675-4811801)
chr6 (341-419)||(35163561-35163639)
chr6 (248-304)||(22534214-22534270)
[»] scaffold0273 (2 HSPs)
scaffold0273 (246-424)||(4576-4754)
scaffold0273 (287-408)||(4242-4364)
[»] chr7 (31 HSPs)
chr7 (246-424)||(19830418-19830596)
chr7 (247-424)||(37786766-37786943)
chr7 (248-424)||(19590525-19590701)
chr7 (245-419)||(2659214-2659388)
chr7 (247-416)||(38858642-38858811)
chr7 (251-424)||(29100220-29100393)
chr7 (246-419)||(35289275-35289448)
chr7 (248-419)||(32004988-32005159)
chr7 (251-424)||(4641443-4641616)
chr7 (246-415)||(34534169-34534338)
chr7 (245-408)||(19590909-19591073)
chr7 (254-417)||(23953105-23953268)
chr7 (246-417)||(4478076-4478247)
chr7 (245-408)||(38859025-38859189)
chr7 (246-408)||(2658837-2659000)
chr7 (246-408)||(34533789-34533952)
chr7 (246-407)||(32004612-32004774)
chr7 (245-406)||(37787153-37787315)
chr7 (16-128)||(4903050-4903163)
chr7 (261-408)||(29099863-29100011)
chr7 (248-364)||(35288903-35289019)
chr7 (245-388)||(38160948-38161091)
chr7 (246-386)||(28583437-28583577)
chr7 (249-388)||(28584327-28584466)
chr7 (247-408)||(19830804-19830965)
chr7 (245-365)||(23952727-23952848)
chr7 (251-408)||(4641828-4641983)
chr7 (16-121)||(4906435-4906540)
chr7 (382-417)||(32427397-32427432)
chr7 (251-424)||(35578902-35579074)
chr7 (336-424)||(35579256-35579344)
[»] chr8 (31 HSPs)
chr8 (240-424)||(12571855-12572040)
chr8 (245-424)||(19176659-19176838)
chr8 (246-419)||(41681132-41681304)
chr8 (239-424)||(44831614-44831799)
chr8 (241-415)||(31133213-31133387)
chr8 (252-424)||(13224645-13224816)
chr8 (247-424)||(9930026-9930203)
chr8 (245-417)||(11656452-11656625)
chr8 (251-424)||(33328161-33328334)
chr8 (248-424)||(9178005-9178180)
chr8 (247-408)||(13225023-13225185)
chr8 (245-408)||(19176287-19176451)
chr8 (247-408)||(44831246-44831408)
chr8 (248-365)||(41681562-41681679)
chr8 (245-408)||(33742919-33743082)
chr8 (251-408)||(9928912-9929070)
chr8 (247-408)||(11656841-11657003)
chr8 (245-374)||(34540967-34541096)
chr8 (295-419)||(33743293-33743417)
chr8 (249-407)||(31133605-31133764)
chr8 (251-424)||(4630161-4630328)
chr8 (251-408)||(12572235-12572393)
chr8 (250-408)||(33328524-33328683)
chr8 (246-356)||(11336959-11337069)
chr8 (246-402)||(4629795-4629952)
chr8 (247-388)||(8073957-8074097)
chr8 (245-386)||(10918123-10918264)
chr8 (330-388)||(43958267-43958325)
chr8 (340-408)||(9177724-9177793)
chr8 (246-281)||(9177665-9177700)
chr8 (245-293)||(43958206-43958254)
[»] chr2 (38 HSPs)
chr2 (246-419)||(11090519-11090692)
chr2 (245-424)||(239350-239528)
chr2 (247-424)||(40027139-40027316)
chr2 (245-425)||(18451199-18451379)
chr2 (248-424)||(43058333-43058509)
chr2 (246-413)||(22374318-22374485)
chr2 (245-416)||(40815722-40815893)
chr2 (246-417)||(1978106-1978277)
chr2 (247-413)||(26538096-26538262)
chr2 (245-417)||(26538454-26538627)
chr2 (251-419)||(14432145-14432313)
chr2 (248-419)||(28616613-28616785)
chr2 (245-424)||(3025463-3025641)
chr2 (251-417)||(8425736-8425902)
chr2 (126-247)||(16194936-16195057)
chr2 (247-404)||(7446341-7446497)
chr2 (247-388)||(20444748-20444889)
chr2 (245-408)||(7446730-7446894)
chr2 (245-388)||(20440437-20440579)
chr2 (247-408)||(18450829-18450991)
chr2 (241-408)||(40815338-40815506)
chr2 (246-408)||(22374709-22374872)
chr2 (251-408)||(40027524-40027682)
chr2 (249-388)||(35781068-35781207)
chr2 (248-388)||(35779708-35779848)
chr2 (245-408)||(43058717-43058880)
chr2 (246-408)||(11090904-11091067)
chr2 (247-408)||(28616998-28617160)
chr2 (249-408)||(239736-239896)
chr2 (246-374)||(1978528-1978656)
chr2 (246-365)||(28847123-28847242)
chr2 (250-388)||(8972239-8972377)
chr2 (251-407)||(8425358-8425514)
chr2 (248-407)||(3025848-3026006)
chr2 (250-389)||(15552458-15552596)
chr2 (250-388)||(15551501-15551639)
chr2 (245-408)||(14432525-14432689)
chr2 (245-424)||(28143400-28143578)
[»] chr3 (59 HSPs)
chr3 (248-424)||(39555946-39556122)
chr3 (246-424)||(31779021-31779199)
chr3 (251-424)||(41046703-41046876)
chr3 (244-419)||(20840556-20840731)
chr3 (246-424)||(5136978-5137156)
chr3 (245-424)||(24300925-24301104)
chr3 (247-424)||(37726928-37727105)
chr3 (245-403)||(48452986-48453144)
chr3 (247-424)||(23644461-23644638)
chr3 (245-424)||(26837725-26837903)
chr3 (248-417)||(43973441-43973610)
chr3 (248-419)||(32535333-32535508)
chr3 (245-424)||(30104479-30104657)
chr3 (250-424)||(25853596-25853770)
chr3 (247-417)||(27393953-27394123)
chr3 (245-408)||(43973824-43973988)
chr3 (245-408)||(17464488-17464652)
chr3 (252-424)||(22425182-22425354)
chr3 (245-424)||(26274936-26275114)
chr3 (247-424)||(17464860-17465038)
chr3 (248-408)||(37727314-37727475)
chr3 (247-408)||(20840945-20841107)
chr3 (247-408)||(27393660-27393822)
chr3 (245-410)||(29801798-29801964)
chr3 (247-408)||(39555577-39555739)
chr3 (246-408)||(4275748-4275911)
chr3 (247-408)||(31778652-31778814)
chr3 (251-388)||(25612382-25612519)
chr3 (248-408)||(23644849-23645010)
chr3 (248-408)||(25853234-25853395)
chr3 (245-408)||(5137365-5137529)
chr3 (247-408)||(30098147-30098309)
chr3 (248-369)||(29801356-29801477)
chr3 (245-408)||(22424811-22424975)
chr3 (251-374)||(32534962-32535085)
chr3 (248-388)||(50116814-50116954)
chr3 (246-408)||(26837358-26837521)
chr3 (251-408)||(24300560-24300717)
chr3 (248-387)||(23228414-23228552)
chr3 (251-408)||(26274570-26274728)
chr3 (251-408)||(41047083-41047239)
chr3 (249-389)||(32697105-32697244)
chr3 (245-388)||(51474738-51474882)
chr3 (249-362)||(51473429-51473542)
chr3 (246-388)||(37220555-37220697)
chr3 (246-386)||(45965936-45966076)
chr3 (250-386)||(25420548-25420684)
chr3 (273-376)||(18010162-18010265)
chr3 (249-388)||(25419145-25419284)
chr3 (246-324)||(37222040-37222118)
chr3 (247-388)||(23227261-23227396)
chr3 (364-415)||(29801532-29801583)
chr3 (245-424)||(49407793-49407971)
chr3 (353-424)||(55192222-55192293)
chr3 (245-417)||(27200069-27200240)
chr3 (251-375)||(32695706-32695830)
chr3 (341-424)||(37075781-37075864)
chr3 (245-301)||(52375824-52375880)
chr3 (245-301)||(55390090-55390146)
[»] scaffold0951 (2 HSPs)
scaffold0951 (246-419)||(1665-1838)
scaffold0951 (242-408)||(2051-2218)
[»] scaffold0019 (1 HSPs)
scaffold0019 (245-424)||(134042-134221)
[»] scaffold0007 (3 HSPs)
scaffold0007 (247-425)||(64301-64479)
scaffold0007 (251-363)||(64735-64847)
scaffold0007 (250-424)||(205738-205911)
[»] scaffold1223 (2 HSPs)
scaffold1223 (250-417)||(755-921)
scaffold1223 (248-417)||(1116-1286)
[»] scaffold0027 (2 HSPs)
scaffold0027 (245-424)||(42528-42706)
scaffold0027 (251-417)||(42172-42339)
[»] scaffold0432 (2 HSPs)
scaffold0432 (251-424)||(10242-10414)
scaffold0432 (251-355)||(9935-10039)
[»] scaffold0417 (2 HSPs)
scaffold0417 (270-424)||(10643-10797)
scaffold0417 (248-374)||(11042-11168)
[»] scaffold0176 (2 HSPs)
scaffold0176 (247-415)||(18834-19001)
scaffold0176 (248-345)||(19069-19166)
[»] scaffold0113 (1 HSPs)
scaffold0113 (247-374)||(28662-28789)
[»] scaffold0157 (2 HSPs)
scaffold0157 (316-424)||(16564-16672)
scaffold0157 (265-408)||(16880-17024)
[»] scaffold1585 (1 HSPs)
scaffold1585 (249-388)||(568-707)
[»] scaffold0057 (2 HSPs)
scaffold0057 (251-388)||(61863-62000)
scaffold0057 (246-322)||(61026-61102)
[»] scaffold1696 (1 HSPs)
scaffold1696 (252-388)||(454-588)
[»] scaffold0076 (1 HSPs)
scaffold0076 (251-351)||(8451-8551)
[»] scaffold0168 (1 HSPs)
scaffold0168 (297-388)||(7693-7784)


Alignment Details
Target: chr5 (Bit Score: 159; Significance: 2e-84; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 246 - 424
Target Start/End: Complemental strand, 2865302 - 2865124
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2865302 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 2865203  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2865202 gtttcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 2865124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 248 - 424
Target Start/End: Complemental strand, 5819474 - 5819298
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5819474 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 5819375  T
Q  348 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||| ||||    
T  5819374 tgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagatctaccccctatgct 5819298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 245 - 424
Target Start/End: Complemental strand, 18183517 - 18183338
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18183517 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 18183418  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||    
T  18183417 tgttgcatttttcgtcctacccctcattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 18183338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 246 - 424
Target Start/End: Original strand, 8460928 - 8461106
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||| ||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8460928 taggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 8461027  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||    
T  8461028 gttgcatttttcgtcataccccccattttattctccaaaaatgcagagaaatgacagttttagacctaccccctatgct 8461106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 248 - 416
Target Start/End: Original strand, 8647438 - 8647606
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  8647438 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgt 8647537  T
Q  348 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 416  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8647538 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 8647606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 248 - 424
Target Start/End: Original strand, 19359136 - 19359312
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  19359136 ggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 19359235  T
Q  348 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||    
T  19359236 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttctagacctaccccctatgct 19359312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 247 - 415
Target Start/End: Complemental strand, 29455288 - 29455120
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||| ||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  29455288 aggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 29455189  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 415  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29455188 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacatacc 29455120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 244 - 419
Target Start/End: Complemental strand, 14215792 - 14215617
Alignment:
Q  244 cttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattt 343  Q
    |||||||||||||||| |||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  14215792 cttaggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcattt 14215693  T
Q  344 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccct 419  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14215692 ttgttgcatttttcgtcttaacccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccct 14215617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 246 - 424
Target Start/End: Complemental strand, 24362383 - 24362205
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||    
T  24362383 taggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcattttt 24362284  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||| ||||    
T  24362283 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacttatcccctatgct 24362205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 245 - 424
Target Start/End: Original strand, 15708968 - 15709146
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| | ||||||||||||| |||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||    
T  15708968 ttaggcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 15709067  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  15709068 tgttgcatatttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 15709146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 245 - 424
Target Start/End: Complemental strand, 164739 - 164560
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    ||||||||||||| | ||||| || || |||||||||| | |||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  164739 ttaggcttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttt 164640  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  164639 tgttgcattttttgtcctaccccccattttattctccaaaaatgtagagaaatgacagttttagacctaccccctatgct 164560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 245 - 415
Target Start/End: Complemental strand, 15372421 - 15372251
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  15372421 ttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttt 15372322  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 415  Q
    |||||||||||| || ||||  ||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  15372321 tgttgcattttttgttctacatcccattttattttccaaaaacgcagagaaatgacagttttagacctacc 15372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 247 - 424
Target Start/End: Original strand, 16018588 - 16018763
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| |||||||||||||| ||||||||| ||||||     
T  16018588 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat-attttta 16018686  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||| ||||||| ||||||||||||||||||||||  |||| |||||||||||||||||||||||||| ||||    
T  16018687 ttgcattttccgtccta-cccccattttattctccaaaaatatagaaaaatgacagttttagacctaccccctatgct 16018763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 246 - 408
Target Start/End: Complemental strand, 19359683 - 19359520
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19359683 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19359584  T
Q  346 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||| ||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||    
T  19359583 gttggatttttcgtcctacctcctattttcaaactccagaaacgtagagaaatggcagttttag 19359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 246 - 408
Target Start/End: Original strand, 5818927 - 5819090
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    |||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5818927 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 5819026  T
Q  346 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||| |||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  5819027 gttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttag 5819090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 246 - 408
Target Start/End: Original strand, 18182968 - 18183131
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    |||| |||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  18182968 taggtttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18183067  T
Q  346 gttgcatttttcgtcctacccccca-ttttattctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||||||||||| || | |||||| | ||| ||||| |||||||||||||||||||    
T  18183068 gttgcatttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttag 18183131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 245 - 408
Target Start/End: Complemental strand, 8647986 - 8647822
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  8647986 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 8647887  T
Q  345 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||||||| ||||  | ||||| |  ||||| ||||| |||||||||||||||||||    
T  8647886 tgttgcatttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttag 8647822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 247 - 410
Target Start/End: Complemental strand, 25000635 - 25000471
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||| ||||| ||  ||||||||||||||||||| ||||||||||||||||||||||    
T  25000635 aggcttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcatttttg 25000536  T
Q  347 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagac 410  Q
    ||||||||||||||| ||| || ||||| |  ||||||||||| |||||||||||||||||||||    
T  25000535 ttgcatttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttagac 25000471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 246 - 413
Target Start/End: Complemental strand, 14464067 - 14463901
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||  |  || |||||||||| ||||||||||| || ||||||||||||||||    
T  14464067 taggcttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcattttt 14463968  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagaccta 413  Q
     ||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  14463967 attgcatttttcgtccta-ccccaattttattctccaaaaacgcagagaaatgacagttttagaccta 14463901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 247 - 408
Target Start/End: Complemental strand, 8461477 - 8461315
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  8461477 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttg 8461378  T
Q  347 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
     ||||||||||||| |||| || ||||| |  ||||| ||||| |||||||||||| ||||||    
T  8461377 ctgcatttttcgtcatacctcctattttcaaactccagaaacgcagagaaatgacaattttag 8461315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 250 - 424
Target Start/End: Complemental strand, 24332107 - 24331929
Alignment:
Q  250 cttaattacactttt-ggtcttcgtgttttggcctattcacgaaactggtcctgccctttt-aaaacagaacaaaacggtcattcaattatcattttt-g 346  Q
    ||||||||||||||| |||| || ||||||||| || ||||||||||| ||||||| |||| ||||||||||||||||||| | |||||||||||||| |    
T  24332107 cttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttg 24332008  T
Q  347 ttgcattttt-cgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  24332007 ttgcattttttcgtcctaccccccattctattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 24331929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 254 - 408
Target Start/End: Original strand, 24361843 - 24361997
Alignment:
Q  254 attacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatt 353  Q
    |||||||||||||||  | ||||||||||||  |||||||||| || ||||||| ||||||||||||||| |||| ||||| ||||||||||||||||||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatt 24361942  T
Q  354 tttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||    
T  24361943 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24361997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 270 - 415
Target Start/End: Original strand, 25000112 - 25000257
Alignment:
Q  270 tcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctacccccc 369  Q
    ||||||||||||||| |||||||  ||||| |||||| ||||||||||| |||| |||| || ||||||||||||| |||||||||| ||||||||||||    
T  25000112 tcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctacccccc 25000211  T
Q  370 attttattctccaaaaacgtagagaaatgacagttttagacctacc 415  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  25000212 attttattctccaaaaacgtagagaaatgacagttttagatctacc 25000257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 248 - 407
Target Start/End: Original strand, 164191 - 164350
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||    
T  164191 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatca-ttttgt 164289  T
Q  348 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 407  Q
    |||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||| |||||    
T  164290 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaatttta 164350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 250 - 408
Target Start/End: Original strand, 2864756 - 2864915
Alignment:
Q  250 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 349  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| || || ||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  2864756 cttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttg 2864855  T
Q  350 catttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  2864856 catttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 2864915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 254 - 408
Target Start/End: Original strand, 24325218 - 24325372
Alignment:
Q  254 attacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatt 353  Q
    |||||||||||||||  | ||||||||||||  |||||||||| || ||||||| ||||||||||||||| |||| ||||| |||||||||||| |||||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatt 24325317  T
Q  354 tttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||    
T  24325318 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24325372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 250 - 408
Target Start/End: Original strand, 14215243 - 14215402
Alignment:
Q  250 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 349  Q
    ||||||||||||||||||| |||||||||||| || |||||||||||||  | ||||||||||||||||||||| |||| |||| |||||||||||||||    
T  14215243 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttg 14215342  T
Q  350 catttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  14215343 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 14215402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 245 - 408
Target Start/End: Original strand, 24331556 - 24331722
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatc--att 342  Q
    |||||||||||||||||||||||| ||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||   ||    
T  24331556 ttaggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctattt 24331655  T
Q  343 tttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||| ||||| | || ||||| |  ||||| ||||| |||||||||||||||||||    
T  24331656 tttgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 24331722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 247 - 408
Target Start/End: Original strand, 29454739 - 29454901
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||| ||||||||||| | ||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||| || ||||||||||||||    
T  29454739 aggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatcatttttg 29454838  T
Q  347 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
     |||||||||||||||||| || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  29454839 ctgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 29454901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 248 - 388
Target Start/End: Complemental strand, 7349562 - 7349422
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| ||||||||||| ||| |||||||| ||||||||| ||||||||||| ||||||||  || |||| |||||||||||||    
T  7349562 ggcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgt 7349463  T
Q  348 tgcatttttcgtcctaccccccattttattctccaaaaacg 388  Q
    |||| ||||| |||||||||||||||| | |||||||||||    
T  7349462 tgcacttttcatcctaccccccattttttcctccaaaaacg 7349422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 246 - 410
Target Start/End: Complemental strand, 16019134 - 16018969
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    |||| |||||||||||||||||| || ||||||||| || |||||||| ||||||||| ||||||||| |||| |||| |||  ||||||||||||||||    
T  16019134 taggtttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcattttt 16019035  T
Q  346 gttgcatttttcgtcctacccccca-ttttattctccaaaaacgtagagaaatgacagttttagac 410  Q
    |||| ||||||||||||||| || | |||||  ||||| ||||| |||||||||||||||||||||    
T  16019034 gttgtatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttagac 16018969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 249 - 368
Target Start/End: Complemental strand, 4222266 - 4222147
Alignment:
Q  249 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 348  Q
    |||||||||||||||||||| ||||||||||| ||  |||||||| ||||| |||||||||||||||||||||||  |||||||| ||||||||||| ||    
T  4222266 gcttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttatt 4222167  T
Q  349 gcatttttcgtcctaccccc 368  Q
    ||||||||||||||||||||    
T  4222166 gcatttttcgtcctaccccc 4222147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 248 - 408
Target Start/End: Complemental strand, 15709513 - 15709353
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| | ||||||||||||| ||| |||||| ||| |||||||| ||||||||||||||||||| || | ||||||||| |||    
T  15709513 ggcttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgcccttt-aaaacagaacaaaacggtcctttagttatcatttctgt 15709415  T
Q  348 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||||||||| || ||||| |  ||||| || || |||||||||||||||||||    
T  15709414 tgcatttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttttag 15709353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 248 - 389
Target Start/End: Original strand, 4623148 - 4623287
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| |||||||||| | || |||||||| ||||||||||  |||||||||||||||||  ||| |||||||||||||||| |    
T  4623148 ggcttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcatttttat 4623247  T
Q  348 tgcatttttcgtcctaccccccattttattctccaaaaacgt 389  Q
     ||||||| |||||||  ||||||||||| ||||||||||||    
T  4623248 ggcattttccgtccta--ccccattttatcctccaaaaacgt 4623287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 250 - 361
Target Start/End: Original strand, 15371873 - 15371983
Alignment:
Q  250 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 349  Q
    |||||||||||||||| || |||| |||||| ||| |||||||  ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  15371873 cttaattacacttttgatcctcgtattttggtctactcacgaat-tggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttg 15371971  T
Q  350 catttttcgtcc 361  Q
    ||||||||||||    
T  15371972 catttttcgtcc 15371983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 248 - 386
Target Start/End: Original strand, 4219663 - 4219800
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    |||||||||||||||||| || ||||||||||| ||||| || ||| ||||| |||| |||||||||||||||||   ||| || | |||||||||||||    
T  4219663 ggcttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgt 4219762  T
Q  348 tgcatttttcgtcctaccccccattttattctccaaaaa 386  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  4219763 tgcatttttcgtccta-cccccattttatcctccaaaaa 4219800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 248 - 374
Target Start/End: Original strand, 7348559 - 7348685
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    |||||||||||| |||||||| || |||||| | ||| |||||||| ||||| ||||||||||||||||||||||||  || |||  |||||||||||||    
T  7348559 ggcttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcatttttgt 7348658  T
Q  348 tgcatttttcgtcctaccccccatttt 374  Q
    |||| ||||||||||||||||||||||    
T  7348659 tgcacttttcgtcctaccccccatttt 7348685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 254 - 386
Target Start/End: Complemental strand, 6019309 - 6019177
Alignment:
Q  254 attacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcat- 352  Q
    |||||| |||||||| || ||||||||| || ||||||||||| || ||| |||||||||||||||||||| ||| || ||||||||||||||||||||     
T  6019309 attacatttttggtcatcatgttttggc-tactcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgttgcatt 6019211  T
Q  353 ttttcgtcctaccccccattttattctccaaaaa 386  Q
    ||||||||||||| |||||||||| |||||||||    
T  6019210 ttttcgtcctacctcccattttatcctccaaaaa 6019177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 261 - 387
Target Start/End: Complemental strand, 4624757 - 4624631
Alignment:
Q  261 ttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtc 360  Q
    |||| ||| |||||||||  |||| |||||||| ||||| || |  ||||||||| ||||||||  ||||||||||||||||| ||||||||||||||||    
T  4624757 ttttcgtcctcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtc 4624658  T
Q  361 ctaccccccattttattctccaaaaac 387  Q
    |||||||||||||||| || |||||||    
T  4624657 ctaccccccattttatccttcaaaaac 4624631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 249 - 387
Target Start/End: Original strand, 6018315 - 6018452
Alignment:
Q  249 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 348  Q
    ||||||||||| |||||||  ||||||||||  ||| |||||||||||||| || ||||||||||||||||||||   || |||||||||||||||||||    
T  6018315 gcttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattatc-ttcaattatcatttttgtt 6018413  T
Q  349 gcatttttcgtcctaccccccattttattctccaaaaac 387  Q
    ||| |||| ||||||||| | |||||   ||||||||||    
T  6018414 gcagttttagtcctaccctctattttcacctccaaaaac 6018452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 299 - 388
Target Start/End: Complemental strand, 13814226 - 13814133
Alignment:
Q  299 cctgcccttttaaaacagaacaaaacggtcat-----tcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 388  Q
    |||||||||||||| ||||||||||| |||||     ||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||    
T  13814226 cctgcccttttaaatcagaacaaaactgtcatgtctttcaattatcatttttgttgcacttttcgtcctac-ccccattttatcctccaaaaacg 13814133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 408
Target Start/End: Original strand, 14462683 - 14462769
Alignment:
Q  327 tcattcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctc----caaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||| |  |||    || |||||||||||||||||||||||||    
T  14462683 tcattcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagacagaaacgtagagaaatgacagttttag 14462769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 10721873 - 10721945
Alignment:
Q  336 tatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||| ||| ||||| |||| |||||||| || |||||   ||||| |||||||||||||||||||||||||    
T  10721873 tatcatgttttttgcagttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagttttag 10721945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 408
Target Start/End: Complemental strand, 14340823 - 14340793
Alignment:
Q  378 ctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||||||||||||||||||||||    
T  14340823 ctccaaaaacgtagagaaatgacagttttag 14340793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 154; Significance: 2e-81; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 247 - 424
Target Start/End: Complemental strand, 50970824 - 50970647
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  50970824 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 50970725  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  50970724 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 50970647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 247 - 417
Target Start/End: Complemental strand, 5540364 - 5540194
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  5540364 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcatttttg 5540265  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 417  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5540264 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 5540194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 246 - 424
Target Start/End: Original strand, 18984117 - 18984295
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18984117 taggcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18984216  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||| ||||    
T  18984217 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgatagttttagacctaacccctatgct 18984295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 247 - 417
Target Start/End: Complemental strand, 15646741 - 15646571
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||    
T  15646741 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 15646642  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 417  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15646641 ttgcatttttcgtcctacccccaattttattctccaaaaacgcagagaaatgacagttttagacctacccc 15646571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 248 - 417
Target Start/End: Original strand, 29306953 - 29307122
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    |||||||||||||||||| || ||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||    
T  29306953 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307052  T
Q  348 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 417  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29307053 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 29307122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 247 - 424
Target Start/End: Original strand, 29869619 - 29869796
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| |||||||||||| || |||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||    
T  29869619 aggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattatttttg 29869718  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  29869719 ttgcatttttcgtcctacaccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 29869796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 250 - 425
Target Start/End: Complemental strand, 33144462 - 33144287
Alignment:
Q  250 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 349  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| || | ||||| ||||||||||||||    
T  33144462 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttg 33144363  T
Q  350 catttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgctt 425  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||    
T  33144362 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgctt 33144287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 251 - 424
Target Start/End: Complemental strand, 5963120 - 5962947
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||| || ||||||||||||| |||||||||| ||| |||||||||||||||||||||    
T  5963120 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcatttttgttgc 5963021  T
Q  351 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  5963020 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 5962947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 251 - 424
Target Start/End: Original strand, 15173099 - 15173272
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    |||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||  ||||||||||||  |||||||||||||||||||||    
T  15173099 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttgttgc 15173198  T
Q  351 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  15173199 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 15173272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 248 - 424
Target Start/End: Complemental strand, 8679086 - 8678911
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8679086 ggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttttgt 8678987  T
Q  348 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||||| || ||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||    
T  8678986 tgcatttttcgtccta-cctccattttattctccaaaaatgcagagaaatgacagttttagacctaccccctatgct 8678911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 245 - 424
Target Start/End: Original strand, 9018970 - 9019149
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  9018970 ttaggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcatttt 9019069  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| | | ||||||| ||||||||| ||||    
T  9019070 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaattatatttttagatctaccccctatgct 9019149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 248 - 424
Target Start/End: Complemental strand, 21856588 - 21856412
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||||||| ||||||| ||||||||||||||||||||||| ||||| |||||||||||     
T  21856588 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgc 21856489  T
Q  348 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  21856488 tgcatttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 21856412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 248 - 424
Target Start/End: Original strand, 17433216 - 17433392
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| || |||||||||||| ||| |||||||  | |||||||||||||||||||||||||||| ||||| ||||||||||||    
T  17433216 ggcttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 17433315  T
Q  348 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  17433316 tgcatttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 17433392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 248 - 417
Target Start/End: Complemental strand, 29307487 - 29307317
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||| ||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29307487 ggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307388  T
Q  348 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctacccc 417  Q
    |||||||||||||||||| || ||||| |  ||||| ||||| ||||||||||||||||||||||||||||    
T  29307387 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctacccc 29307317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 250 - 424
Target Start/End: Original strand, 39154021 - 39154195
Alignment:
Q  250 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 349  Q
    ||||||||||||||||||| || ||||||||| || ||||||||||| || |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  39154021 cttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttg 39154120  T
Q  350 catttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||| | ||||| ||||    
T  39154121 catttttcgtcctaccccccattctattctccaaaaacgcatagaaatgacagttttagacccatcccctatgct 39154195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 246 - 415
Target Start/End: Complemental strand, 26859606 - 26859438
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    |||||||||||||||||||| || ||||||||||| ||| ||||||||||  |||||||||||||||||||||||| |||||| ||||||||||||||||    
T  26859606 taggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcattttt 26859507  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 415  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||| | |||||||||||||||    
T  26859506 gttgcatttttcgtcctacccccca-tttattctccaaaaacgcagagaaataatagttttagacctacc 26859438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 245 - 417
Target Start/End: Complemental strand, 9019511 - 9019338
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| |||||||||| |||| |||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  9019511 ttaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcatttt 9019412  T
Q  345 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctacccc 417  Q
    ||||||||||||||||||||| || ||||| |  | ||| ||||| |||||||| |||||||||||||| ||||    
T  9019411 tgttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagttttagacctgcccc 9019338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 250 - 410
Target Start/End: Complemental strand, 17433758 - 17433597
Alignment:
Q  250 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 349  Q
    ||||||||||||||||||| ||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17433758 cttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 17433659  T
Q  350 catttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagac 410  Q
    |||||||||||||||| || ||||| |  || || ||||| |||||||||||||||||||||    
T  17433658 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagac 17433597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 246 - 406
Target Start/End: Original strand, 50970276 - 50970437
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||    
T  50970276 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcattttt 50970375  T
Q  346 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttt 406  Q
    ||||||||||||||||||||  | ||||| |  ||||| ||||| |||||||||||||||||    
T  50970376 gttgcatttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttt 50970437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 248 - 408
Target Start/End: Complemental strand, 29870164 - 29870003
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  29870164 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 29870065  T
Q  348 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||||||||| || ||||| |  ||  | ||||| |||||||||||||||||||    
T  29870064 tgcatttttcgtcctacctcctattttcaaactttagaaacgcagagaaatgacagttttag 29870003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 247 - 388
Target Start/End: Original strand, 52268289 - 52268430
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| |||| |||||||||  |||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  52268289 aggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcatttttg 52268388  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacg 388  Q
    ||||| |||||||||||||||||||||| | |||||||||||    
T  52268389 ttgcacttttcgtcctaccccccattttttcctccaaaaacg 52268430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 249 - 408
Target Start/End: Original strand, 5539817 - 5539977
Alignment:
Q  249 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 348  Q
    |||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5539817 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 5539916  T
Q  349 gcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    | ||||||||||||||| || ||||| |  ||||| ||||| | ||||||| |||||||||    
T  5539917 gtatttttcgtcctacctcctattttcaaactccataaacgcatagaaatggcagttttag 5539977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 249 - 365
Target Start/End: Original strand, 8678542 - 8678658
Alignment:
Q  249 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 348  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  8678542 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgtt 8678641  T
Q  349 gcatttttcgtcctacc 365  Q
    |||||||||||||||||    
T  8678642 gcatttttcgtcctacc 8678658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 245 - 408
Target Start/End: Original strand, 21856039 - 21856203
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||| ||||||||||||||||||| ||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21856039 ttagacttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 21856138  T
Q  345 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||| ||||| | || ||||| |  ||||| ||||| |||||||||||||||||||    
T  21856139 tgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 21856203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 249 - 407
Target Start/End: Complemental strand, 4636515 - 4636356
Alignment:
Q  249 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 348  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||    
T  4636515 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgtt 4636416  T
Q  349 gcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 407  Q
    ||||||||||||| ||| || ||||| |  ||||| ||||| |||||||||||| |||||    
T  4636415 gcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaatttta 4636356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 246 - 408
Target Start/End: Complemental strand, 15173640 - 15173478
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  15173640 taggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc-ttttaaaacagaacaaaatggtccttcaattatcattttt 15173542  T
Q  346 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||||||||||| || ||||| |  ||| | ||||| |||||||||||||||||||    
T  15173541 gttgcatttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttag 15173478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 247 - 374
Target Start/End: Complemental strand, 18984665 - 18984538
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| | ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18984665 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18984566  T
Q  347 ttgcatttttcgtcctaccccccatttt 374  Q
    ||||||||||||||||||| || |||||    
T  18984565 ttgcatttttcgtcctacctcctatttt 18984538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 247 - 408
Target Start/End: Complemental strand, 39154566 - 39154404
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||| |||||||||||||||||    
T  39154566 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttg 39154467  T
Q  347 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||||||| || ||||| |  || || ||||| |||||||||||| ||||||    
T  39154466 ttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacaattttag 39154404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 256 - 408
Target Start/End: Original strand, 33143925 - 33144078
Alignment:
Q  256 tacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttt 355  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttttgcatatt 33144024  T
Q  356 tcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||| || ||||| |  ||| | ||||| |||||||||||||||||||    
T  33144025 tcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 33144078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 246 - 408
Target Start/End: Original strand, 15646190 - 15646353
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    |||||||||||| |||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||  ||||||||||||||||    
T  15646190 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcattttt 15646289  T
Q  346 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||||||||||| |  ||||| |  ||||| ||| | |||||||||||||||||||    
T  15646290 gttgcatttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttag 15646353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 248 - 365
Target Start/End: Original strand, 26859059 - 26859176
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| | ||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  26859059 ggcttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 26859158  T
Q  348 tgcatttttcgtcctacc 365  Q
    ||||||||||||||||||    
T  26859159 tgcatttttcgtcctacc 26859176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 249 - 408
Target Start/End: Original strand, 5962579 - 5962739
Alignment:
Q  249 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 348  Q
    ||||||||||| |||||||| ||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  5962579 gcttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgtt 5962678  T
Q  349 gcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||| ||||| || ||||| |  ||||| ||||  |||| ||||||||||||||    
T  5962679 gcatttttcgttctacctcctattttcaaactccagaaacacagagtaatgacagttttag 5962739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 308 - 419
Target Start/End: Original strand, 4636033 - 4636143
Alignment:
Q  308 ttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagtttta 407  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||||| || ||||||||||||||||||| |||||||| ||||||||||||||||||    
T  4636033 ttaaaacagaacaaa-cggtccttcaagtatcatttttgttgcattttttgttctaccccccattttattcttcaaaaacgcagagaaatgacagtttta 4636131  T
Q  408 gacctaccccct 419  Q
    ||||||||||||    
T  4636132 gacctaccccct 4636143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 250 - 364
Target Start/End: Complemental strand, 52269291 - 52269177
Alignment:
Q  250 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 349  Q
    ||||||||||||||||||| |||||||||| | || ||| ||||  ||| ||||||||||||||||||||||||  |||||||| |||||||||||||||    
T  52269291 cttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatcatttttgttg 52269192  T
Q  350 catttttcgtcctac 364  Q
    || ||||||||||||    
T  52269191 cacttttcgtcctac 52269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 245 - 334
Target Start/End: Complemental strand, 2733505 - 2733416
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaa 334  Q
    ||||||||||||| |||||||||| | |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||    
T  2733505 ttaggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 239 - 348
Target Start/End: Complemental strand, 47827141 - 47827033
Alignment:
Q  239 ttaaacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattat 338  Q
    ||||| || |||||||| ||||||||| ||| | |||||||||||| |||||||| ||||| |||||||||||||||||||||||  ||| || ||||||    
T  47827141 ttaaattttggcttaat-acacttttgatctccttgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattat 47827043  T
Q  339 catttttgtt 348  Q
    ||||||||||    
T  47827042 catttttgtt 47827033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 408
Target Start/End: Original strand, 17112282 - 17112442
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||  || |||||||  ||| ||| |||| ||||   |||||||||||| |||| ||||  ||| |||||||||||||||| |    
T  17112282 ggcttaattacacttttggttctcatgttttgatctactcatgaaattggtag-gcccttttaaaatagaataaaatagtccttcaattatcatttttat 17112380  T
Q  348 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||||||||| || ||||| |  ||||| ||||| ||| |||||| ||||||||    
T  17112381 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgatagttttag 17112442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 250 - 323
Target Start/End: Original strand, 47826966 - 47827039
Alignment:
Q  250 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaa 323  Q
    ||||||||||||||||||| ||||||||||| ||| |||||||| ||||| ||||||||||||| | |||||||    
T  47826966 cttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 328
Target Start/End: Complemental strand, 50419806 - 50419726
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 328  Q
    ||||||||| ||||||||||| |||  ||| | || | |||||||| |||||||||| ||||||||  |||||||||||||    
T  50419806 ggcttaattgcacttttggtcatcgcatttagaccaactcacgaaattggtcctgcctttttaaaattgaacaaaacggtc 50419726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 418
Target Start/End: Complemental strand, 17088550 - 17088516
Alignment:
Q  384 aaacgtagagaaatgacagttttagacctaccccc 418  Q
    ||||| |||||||||||||||||||||||||||||    
T  17088550 aaacgcagagaaatgacagttttagacctaccccc 17088516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 153; Significance: 6e-81; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 246 - 418
Target Start/End: Complemental strand, 25447783 - 25447611
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25447783 taggcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 25447684  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccc 418  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  25447683 gttgcatttttcgtcctaccctccattttattctccaaaaacgcagagaaattacagttttagacctaccccc 25447611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 245 - 424
Target Start/End: Original strand, 12234326 - 12234505
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12234326 ttaggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 12234425  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||| ||||    
T  12234426 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttaaacctaccccctatgct 12234505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 250 - 424
Target Start/End: Complemental strand, 46193948 - 46193774
Alignment:
Q  250 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 349  Q
    ||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  46193948 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 46193849  T
Q  350 catttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  46193848 catttttcgtcctaccccccattttattctccaaaaacgtagagaattgacagttttagacctaccccctatgct 46193774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 250 - 417
Target Start/End: Complemental strand, 38962362 - 38962195
Alignment:
Q  250 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 349  Q
    |||||||||| |||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  38962362 cttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 38962263  T
Q  350 catttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 417  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  38962262 catttttcgtcctaccccccattttattcttcaaaaacgcagagaaatgacagttttagacctacccc 38962195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 245 - 424
Target Start/End: Original strand, 51020794 - 51020973
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    ||||||||||||||||||||| || || |||||||||  |||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  51020794 ttaggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcatttt 51020893  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  51020894 tgttgcatttttcgtcctaccccccattttattcttcaaaaacgtagagaaatgacagttttagacctaccccctatgct 51020973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 247 - 425
Target Start/End: Complemental strand, 15523780 - 15523602
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| ||||||| |||| ||||| |||||||||||    
T  15523780 aggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcatttttg 15523681  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgctt 425  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||    
T  15523680 ttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagacctaccccctatgctt 15523602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 250 - 416
Target Start/End: Original strand, 33109686 - 33109852
Alignment:
Q  250 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 349  Q
    |||||||||| |||||||| |||||||||||| || |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  33109686 cttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttg 33109785  T
Q  350 catttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 416  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33109786 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 33109852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 248 - 424
Target Start/End: Complemental strand, 11153692 - 11153516
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  11153692 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatttttgt 11153593  T
Q  348 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||| |||||||| ||||    
T  11153592 tgcatttttcgtcctaccctccattttattctccaaaaacgcagagaaataacagttttagacttaccccctatgct 11153516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 245 - 417
Target Start/End: Original strand, 25937667 - 25937839
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    ||||||||||||||| |||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25937667 ttaggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 25937766  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 417  Q
    |||||||||||| |||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25937767 tgttgcattttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 25937839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 245 - 424
Target Start/End: Complemental strand, 22434724 - 22434547
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    ||||| ||||||||| |||||||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  22434724 ttaggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaa-cagaacaaaacggtcattcaattatcatttt 22434626  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  22434625 tgttgcatttttcgtcctac-ccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 22434547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 247 - 424
Target Start/End: Complemental strand, 22170482 - 22170306
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| |||||||||| |||| | |||||| || ||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  22170482 aggcttaattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtcattcaattatcatttttg 22170384  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  22170383 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacgtaccccctatgct 22170306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 250 - 415
Target Start/End: Original strand, 23494445 - 23494610
Alignment:
Q  250 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 349  Q
    |||||||||| |||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| |||    
T  23494445 cttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattg 23494544  T
Q  350 catttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 415  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  23494545 catttttcgtcctaccccccattttattctccaaacacgcagagaaatgacagttttagacctacc 23494610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 250 - 424
Target Start/End: Original strand, 4219559 - 4219733
Alignment:
Q  250 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 349  Q
    |||||||||| |||||||| ||||||||||||||| ||||||||||||||||||| |||||||| | |||||||| ||| ||||||||||||||||||||    
T  4219559 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttg 4219658  T
Q  350 catttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| ||||    
T  4219659 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaaacctatcccctatgct 4219733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 251 - 424
Target Start/End: Complemental strand, 2118837 - 2118665
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    |||||||||||||||||||||||||||||||||  ||| ||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||    
T  2118837 ttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttttgttgc 2118738  T
Q  351 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| | ||||||||||||||||||| ||||    
T  2118737 atttttcgtcctac-ccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 2118665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 247 - 424
Target Start/End: Original strand, 48526195 - 48526371
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||  |||||||||| |||| ||| ||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||    
T  48526195 aggcttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 48526294  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||| ||||||||| ||||    
T  48526295 ttgcatttttcgtccta-cccccattttattctccaaaaatgcagagaaatgacagttttagatctaccccctatgct 48526371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 242 - 408
Target Start/End: Complemental strand, 20471062 - 20470895
Alignment:
Q  242 aacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcat 341  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  20471062 aacttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcat 20470963  T
Q  342 ttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||||||||||||||| || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  20470962 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 20470895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 245 - 424
Target Start/End: Original strand, 45082429 - 45082606
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    ||||| |||||||| ||||||||| ||||||||||| ||| ||||||| |||||  ||||||||||||| |||||||||||||| |||||||||||||||    
T  45082429 ttaggtttaattacgcttttggtcatcgtgttttggtctactcacgaa-ctggttttgcccttttaaaatagaacaaaacggtccttcaattatcatttt 45082527  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||||| |||||||||||||||||||||||  |||||||||||| ||||||||||||||||| ||||    
T  45082528 tgttgcatttttcgtccta-cccccattttattctccaaaaacacagagaaatgacaattttagacctaccccctatgct 45082606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 248 - 410
Target Start/End: Original strand, 46193405 - 46193568
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  46193405 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgt 46193504  T
Q  348 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagac 410  Q
    |||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||||    
T  46193505 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagac 46193568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 246 - 424
Target Start/End: Complemental strand, 54995614 - 54995437
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    |||| |||||||||||||||||| ||||||||||||||| ||||||||||| || ||||||||||||| |||||||||||||| ||||| ||||| ||||    
T  54995614 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatca-tttt 54995516  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||||||| |||||||||||||||| ||||||| | |||||||| ||||||||||||||| ||| ||||    
T  54995515 gttgcatttttcgtcctaacccccattttattctctaaaaacgcaaagaaatgatagttttagacctaccacctatgct 54995437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 248 - 408
Target Start/End: Original strand, 22434179 - 22434340
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22434179 ggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 22434278  T
Q  348 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    || ||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  22434279 tgtatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 22434340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 248 - 408
Target Start/End: Original strand, 25447247 - 25447408
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25447247 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 25447346  T
Q  348 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||| ||||||    
T  25447347 tgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttag 25447408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 245 - 364
Target Start/End: Complemental strand, 23494991 - 23494872
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23494991 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 23494892  T
Q  345 tgttgcatttttcgtcctac 364  Q
    ||||||||||||||||||||    
T  23494891 tgttgcatttttcgtcctac 23494872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 246 - 407
Target Start/End: Original strand, 15523233 - 15523395
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  15523233 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattattttt 15523332  T
Q  346 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 407  Q
     ||||||||||||||||||| || ||||| |  ||| | ||||| ||||||||||||||||||    
T  15523333 tttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagtttta 15523395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 248 - 408
Target Start/End: Complemental strand, 45082969 - 45082808
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| |||||||||||| || |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  45082969 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 45082870  T
Q  348 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||||||||| || ||||| |  ||| | ||||| |||||||||||||||||||    
T  45082869 tgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 45082808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 245 - 408
Target Start/End: Complemental strand, 4220107 - 4219943
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||    
T  4220107 ttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcatttt 4220008  T
Q  345 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||||||||| || ||||| |  || |||||||| |||||||| ||||||||||    
T  4220007 tgttgcatttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttag 4219943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 246 - 408
Target Start/End: Original strand, 54995067 - 54995230
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    |||| |||||||||||||||||| |||||| |||||||| |||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  54995067 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 54995166  T
Q  346 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||||||||||| || ||||| |  ||||| ||| |||||||||||||||||||||    
T  54995167 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 54995230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 248 - 408
Target Start/End: Complemental strand, 12234874 - 12234713
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    |||||||||| |||||||||| ||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||    
T  12234874 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 12234775  T
Q  348 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||||||||| || ||||| |  | ||| ||| | |||||||||||||||||||    
T  12234774 tgcatttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttag 12234713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 251 - 408
Target Start/End: Complemental strand, 48526723 - 48526565
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    ||||||| |||||||||| ||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  48526723 ttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcacttttgttgc 48526624  T
Q  351 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||| || ||||| |  ||||| ||||  |||||||||||||||||||    
T  48526623 atttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttag 48526565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 246 - 374
Target Start/End: Complemental strand, 33110011 - 33109883
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||||| || |||||||||||  |||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  33110011 taggcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcattttt 33109912  T
Q  346 gttgcatttttcgtcctaccccccatttt 374  Q
    |||||||||||||||||||| || |||||    
T  33109911 gttgcatttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 247 - 374
Target Start/End: Complemental strand, 25938217 - 25938090
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| | ||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  25938217 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttg 25938118  T
Q  347 ttgcatttttcgtcctaccccccatttt 374  Q
    |||||||||| |||||||| || |||||    
T  25938117 ttgcattttttgtcctacctcctatttt 25938090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 247 - 408
Target Start/End: Original strand, 11153145 - 11153307
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    ||||||||||| |||||||||| ||||||||||||||| |||| ||| ||||| ||||||||||||| |||| ||||||||| |||||||||||||||||    
T  11153145 aggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttg 11153244  T
Q  347 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||||||| || ||||| |  | ||| ||||| |||||||||||||||||||    
T  11153245 ttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttag 11153307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 245 - 362
Target Start/End: Complemental strand, 18764068 - 18763951
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||| ||||||||||||||||||| ||||||||||||||| |||||||||||||| || |||||||||||||||||||| |||||||||| |||||||||    
T  18764068 ttagacttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttt 18763969  T
Q  345 tgttgcatttttcgtcct 362  Q
    ||||||||||||||||||    
T  18763968 tgttgcatttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 316 - 424
Target Start/End: Complemental strand, 12503913 - 12503805
Alignment:
Q  316 gaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 415  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12503913 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 12503814  T
Q  416 ccctttgct 424  Q
    |||| ||||    
T  12503813 ccctatgct 12503805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 246 - 408
Target Start/End: Complemental strand, 51021342 - 51021180
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    |||||||||||||||||||| || ||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||| || |||||||| ||||    
T  51021342 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatca-tttt 51021244  T
Q  346 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||| ||||||||| || ||||||    
T  51021243 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcaattttag 51021180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 251 - 408
Target Start/End: Original strand, 18751602 - 18751760
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    |||||||||||||||||| ||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  18751602 ttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcatttttgttgc 18751701  T
Q  351 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||| ||| || ||||| |  ||||| ||||| ||| ||||| |||||||||    
T  18751702 atttttcgtcccacctcctattttcaaactccagaaacgcagaaaaatggcagttttag 18751760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 250 - 374
Target Start/End: Original strand, 2118295 - 2118419
Alignment:
Q  250 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 349  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| ||||||||||||||||||||| |||||||  ||| ||||||||||||||||||||    
T  2118295 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttttgttg 2118394  T
Q  350 catttttcgtcctaccccccatttt 374  Q
    |||||||||||||||| || |||||    
T  2118395 catttttcgtcctacctcctatttt 2118419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 249 - 388
Target Start/End: Complemental strand, 20958403 - 20958266
Alignment:
Q  249 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 348  Q
    |||||||||||||||| ||| |||| |||||||||| |||||||| ||||||||||||||||||||||||||||   ||| |||||||||||||||||||    
T  20958403 gcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcatttttgtt 20958304  T
Q  349 gcatttttcgtcctaccccccattttattctccaaaaacg 388  Q
    |||||||| |||||| |||||||||||| |||||||||||    
T  20958303 gcattttt-gtccta-cccccattttatcctccaaaaacg 20958266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 249 - 388
Target Start/End: Complemental strand, 44892692 - 44892553
Alignment:
Q  249 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 348  Q
    ||||||||| | |||||||| |||||||||| |||| |||||||| |||| ||||| ||||||||||||||||||| ||| |||||||||  ||||||||    
T  44892692 gcttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgtt 44892593  T
Q  349 gcatttttcgtcctaccccccattttattctccaaaaacg 388  Q
    |||||||||||||||||| ||||||||| |||||||||||    
T  44892592 gcatttttcgtcctaccctccattttatcctccaaaaacg 44892553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 248 - 365
Target Start/End: Complemental strand, 35363146 - 35363028
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgccctttt-aaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||| || ||||||||||||||| ||||||||||||| |||| ||||| |||| | ||||||||||||||||||||||||||||||    
T  35363146 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcatttttg 35363047  T
Q  347 ttgcatttttcgtcctacc 365  Q
    ||||||||||||| |||||    
T  35363046 ttgcatttttcgttctacc 35363028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 246 - 388
Target Start/End: Original strand, 48293592 - 48293734
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||||| |||||||||||| || |||||||| || ||||| |  ||||||||| |||||||  ||  ||||||||||||||||    
T  48293592 taggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcattttt 48293691  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaacg 388  Q
    |||||||||||| |||| ||| |||||||||||||||||||||    
T  48293692 gttgcatttttcatcctgccctccattttattctccaaaaacg 48293734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 248 - 388
Target Start/End: Complemental strand, 48295088 - 48294947
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    |||||||||||| |||||||| ||||||||||  ||| |||||||| ||||| ||||  ||||||||| |||||||  ||||||||||||||||||||||    
T  48295088 ggcttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgt 48294989  T
Q  348 tgcattttt-cgtcctaccccccattttattctccaaaaacg 388  Q
    ||||||||| ||||||||||||||||||||  ||||||||||    
T  48294988 tgcatttttccgtcctaccccccattttatcttccaaaaacg 48294947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 270 - 388
Target Start/End: Complemental strand, 43243803 - 43243686
Alignment:
Q  270 tcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctacccccc 369  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||||||||||||  ||  ||||||||||||||||||||||||||| ||||||| ||||    
T  43243803 tcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcctac-cccc 43243705  T
Q  370 attttattctccaaaaacg 388  Q
    ||||||| |||||||||||    
T  43243704 attttatcctccaaaaacg 43243686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 246 - 384
Target Start/End: Original strand, 48708293 - 48708431
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    |||||||||||||||||||||||   |||||||||||||  ||||||| || |||||||||||||||||| |||||||| ||| ||||||||||||||||    
T  48708293 taggcttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcattttt 48708392  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaa 384  Q
    ||||||||| |  ||||||| | |||||||| |||||||    
T  48708393 gttgcatttataatcctaccactcattttatcctccaaa 48708431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 246 - 388
Target Start/End: Complemental strand, 48713893 - 48713751
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    |||| ||||||||||||||  |  ||||||||| ||||| ||| |||| ||||| ||| |||||||||||||||||||  ||| ||||||||||||||||    
T  48713893 taggtttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcattttt 48713794  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaacg 388  Q
    ||||||||||||||||| ||| ||||||||| |||||||||||    
T  48713793 gttgcatttttcgtcctcccctccattttatcctccaaaaacg 48713751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 249 - 388
Target Start/End: Original strand, 44890518 - 44890657
Alignment:
Q  249 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 348  Q
    ||||||||||| |||||||| | |||||||| ||||||||||||| ||||| |||||||||||||||||||||||   || || ||||||  ||||||||    
T  44890518 gcttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattatattttttgtt 44890617  T
Q  349 gcatttttcgtcctaccccccattttattctccaaaaacg 388  Q
    ||||||||| || ||||||||||||||| ||| |||||||    
T  44890618 gcatttttcatcataccccccattttatcctcaaaaaacg 44890657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 251 - 384
Target Start/End: Original strand, 16690939 - 16691072
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    ||||||||| |||||||| | ||||||||  ||| |||||||| ||||||||||  ||||||||| |||||||   || |||||||||||||||||||||    
T  16690939 ttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcatttttgttgc 16691038  T
Q  351 atttttcgtcctaccccccattttattctccaaa 384  Q
    |||||||||||||||||| ||||||| |||||||    
T  16691039 atttttcgtcctacccccgattttatcctccaaa 16691072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 265 - 408
Target Start/End: Original strand, 12503453 - 12503597
Alignment:
Q  265 ggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctac 364  Q
    |||| |||||||||| | || ||||||||||| ||| ||| ||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||    
T  12503453 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 12503552  T
Q  365 cccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    | || ||||| |  ||||| ||||| |||||||| ||||||||||    
T  12503553 ctcctattttcaaactccagaaacgcagagaaattacagttttag 12503597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 270 - 386
Target Start/End: Complemental strand, 43281313 - 43281198
Alignment:
Q  270 tcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctacccccc 369  Q
    ||||||||||||||| |||||||| ||||| |||| ||||||||||||||||||  ||  ||||||||| ||||||||||||||||||||||||||||||    
T  43281313 tcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat-atttttgttgcatttttcgtcctacccccc 43281215  T
Q  370 attttattctccaaaaa 386  Q
    ||||||| ||| |||||    
T  43281214 attttatcctcaaaaaa 43281198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 247 - 374
Target Start/End: Complemental strand, 10258433 - 10258306
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| ||||||| ||||||| ||| |||| |||||||||||||||||||||||  ||||  ||  |||||||||||||||||    
T  10258433 aggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcatttttg 10258334  T
Q  347 ttgcatttttcgtcctaccccccatttt 374  Q
    ||||| |||| ||| ||||||| |||||    
T  10258333 ttgcagttttagtcttaccccctatttt 10258306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 255 - 386
Target Start/End: Original strand, 20957196 - 20957327
Alignment:
Q  255 ttacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcattt 354  Q
    ||||| |||||||| ||| |||||||| || |||||||| ||||| | | ||||||||||| |||||||  ||| ||||||||||| |||||||||||||    
T  20957196 ttacatttttggtcctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcattt 20957295  T
Q  355 ttcgtcctaccccccattttattctccaaaaa 386  Q
    |||||| ||| ||||||||||||||| |||||    
T  20957296 ttcgtcatactccccattttattctcaaaaaa 20957327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 306 - 388
Target Start/End: Original strand, 43242328 - 43242410
Alignment:
Q  306 ttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 388  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||  ||||||||||    
T  43242328 ttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacctccaattttatcatccaaaaacg 43242410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 248 - 384
Target Start/End: Complemental strand, 16691616 - 16691481
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    |||||||||||||||||| ||   |||||||| |||| |||||||| ||||||||||  |||||| || |||||||  ||| || |||||| ||||||||    
T  16691616 ggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcctctttaaa-cataacaaaattgtcctttaattattatttttgt 16691518  T
Q  348 tgcatttttcgtcctaccccccattttattctccaaa 384  Q
    ||||||||||||| |||| |||||||||| |||||||    
T  16691517 tgcatttttcgtcatacctcccattttatcctccaaa 16691481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 247 - 318
Target Start/End: Complemental strand, 16318322 - 16318251
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaa 318  Q
    |||||||||||||||||||||| ||||||||||||||| |||| |||||| |||||||||||||||||||||    
T  16318322 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaa 16318251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 357 - 424
Target Start/End: Complemental strand, 18752038 - 18751971
Alignment:
Q  357 cgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||| ||||||||||||||||| | |||||||| ||||||||||||||||||||| ||||    
T  18752038 cgtcctaccccctattttattctccaaaaatgcagagaaataacagttttagacctaccccctatgct 18751971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 238 - 424
Target Start/End: Original strand, 17503964 - 17504149
Alignment:
Q  238 attaaacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaatta 337  Q
    |||||| | ||||||||||| ||| |||||| |||  ||||| ||   |||||||| ||||||||||  ||| |||  ||||| ||| ||| |  || ||    
T  17503964 attaaattaaggcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtccta-aacta 17504062  T
Q  338 tcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||| ||| ||||| |||| |||||||| || |||||   ||||| |||||||||||||||||||||||||||||||||||| ||||    
T  17504063 tcatgttttttgcagttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagttttagacctaccccctatgct 17504149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 356
Target Start/End: Original strand, 55189528 - 55189636
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    |||||||||| | ||||| || |||||||||| ||||||||  ||| ||||  ||||||||||||| |||||||||  ||| |||||||||||||||||     
T  55189528 ggcttaattatatttttgatcctcgtgttttgacctattcataaaaatggttatgcccttttaaaatagaacaaaattgtctttcaattatcatttttgc 55189627  T
Q  348 tgcattttt 356  Q
    | |||||||    
T  55189628 tacattttt 55189636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 309 - 388
Target Start/End: Complemental strand, 44220861 - 44220782
Alignment:
Q  309 taaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 388  Q
    |||||||||||||||  ||| |||| |||||||||||||| |||||||||| |||||||  ||||||| |||||||||||    
T  44220861 taaaacagaacaaaattgtccttcatttatcatttttgtttcatttttcgttctacccctaattttatcctccaaaaacg 44220782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 384 - 424
Target Start/End: Complemental strand, 17504369 - 17504329
Alignment:
Q  384 aaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||| |||||||||||||||||||||||||||||| ||||    
T  17504369 aaacgcagagaaatgacagttttagacctaccccctatgct 17504329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 384 - 424
Target Start/End: Original strand, 35193443 - 35193483
Alignment:
Q  384 aaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||| |||||||||||||||||||||||||||||| ||||    
T  35193443 aaacgcagagaaatgacagttttagacctaccccctatgct 35193483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 388
Target Start/End: Complemental strand, 30598065 - 30597926
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctg-cccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    ||||| ||||||||||||||| |||||||||| || | ||||| || |||| ||| | |||||||| | ||||||||  |||  | |||||| |||||||    
T  30598065 ggcttgattacacttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatc-gaacaaaatcgtccctaaattat-atttttg 30597968  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacg 388  Q
    ||||| |||| |||||| |||| ||||||   ||||||||||    
T  30597967 ttgcacttttggtcctaacccctattttaacatccaaaaacg 30597926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 424
Target Start/End: Original strand, 40160236 - 40160269
Alignment:
Q  391 gagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||||||||||||||| ||||    
T  40160236 gagaaatgacagttttagacctaccccctatgct 40160269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 386
Target Start/End: Complemental strand, 55191318 - 55191181
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaatta---tcatttttgt 347  Q
    ||||||| | ||||||| ||||||||||| | || ||| |||| ||||| |||| |||||||| |||| ||||  ||| || |||||   ||||||||||    
T  55191318 ttaattataattttggttttcgtgttttgacatactcatgaaaatggtcatgcc-ttttaaaatagaataaaattgtcttttaattactatcatttttgt 55191220  T
Q  348 tgcatttttcgtcctaccccccattttattctccaaaaa 386  Q
    |||| ||||||| ||| ||  |||||||| ||| |||||    
T  55191219 tgcacttttcgttctaaccatcattttatcctctaaaaa 55191181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 152; Significance: 2e-80; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 245 - 424
Target Start/End: Original strand, 4790 - 4969
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  4790 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 4889  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||    
T  4890 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 4969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 250 - 362
Target Start/End: Complemental strand, 5334 - 5222
Alignment:
Q  250 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 349  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||| || ||||||||||||||| |||||||| |||||||||||||||||||||    
T  5334 cttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttg 5235  T
Q  350 catttttcgtcct 362  Q
    |||||||||||||    
T  5234 catttttcgtcct 5222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 152; Significance: 2e-80; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 246 - 425
Target Start/End: Original strand, 20741098 - 20741277
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  20741098 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcattttt 20741197  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgctt 425  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  20741198 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgctt 20741277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 248 - 424
Target Start/End: Complemental strand, 10900475 - 10900299
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| |||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  10900475 ggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 10900376  T
Q  348 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  10900375 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 10900299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 248 - 424
Target Start/End: Complemental strand, 11277127 - 11276951
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  11277127 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 11277028  T
Q  348 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  11277027 tgcatttttcgtcctaccccccattttattctccaaaaacgaagagaaatgacagttttagacctaccccctatgct 11276951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 246 - 416
Target Start/End: Original strand, 18257135 - 18257305
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18257135 taggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18257234  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 416  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18257235 gttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 18257305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 247 - 424
Target Start/End: Complemental strand, 15828187 - 15828010
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||| | ||||||||||||| |||||||||||| |||||||||||||||||    
T  15828187 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcatttttg 15828088  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||    
T  15828087 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 15828010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 245 - 424
Target Start/End: Original strand, 28472634 - 28472812
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| ||||||||||||| | |||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  28472634 ttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttt 28472733  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  28472734 tgttgcatttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 28472812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 245 - 424
Target Start/End: Original strand, 29859823 - 29860001
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| ||||||||||||| | |||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  29859823 ttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttt 29859922  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  29859923 tgttgcatttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 29860001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 246 - 419
Target Start/End: Complemental strand, 12935704 - 12935531
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||    
T  12935704 taggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcattttt 12935605  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccct 419  Q
    ||| ||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  12935604 gttacatttttcgtcctaccccccattttattctccataaacacagagaaatgacagttttagacctaccccct 12935531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 249 - 417
Target Start/End: Complemental strand, 31470860 - 31470692
Alignment:
Q  249 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 348  Q
    |||||||||||||||||||| | ||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  31470860 gcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 31470761  T
Q  349 gcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 417  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||    
T  31470760 gcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacaattttagatctacccc 31470692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 245 - 408
Target Start/End: Original strand, 2319669 - 2319832
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    ||||||||||||||| |||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  2319669 ttaggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 2319768  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||    
T  2319769 tgttgcatttttcgtcctaccccccattttattctccagaaacgcagagaaatgatagttttag 2319832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 245 - 424
Target Start/End: Original strand, 11444984 - 11445163
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||| |||||||||||| |||| |||| |||||||||||||||    
T  11444984 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcatttt 11445083  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||||||||||| ||||||||||||| ||||||  |||||||||||||||||||||||||||||| ||||    
T  11445084 tgttgcatttttcgtcctaccctccattttattctctaaaaacacagagaaatgacagttttagacctaccccctatgct 11445163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 248 - 419
Target Start/End: Complemental strand, 1149977 - 1149805
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| ||||||||| ||||| ||| |||||||||| ||||||||||||| |||||||||||||| |||||||| |||||||||    
T  1149977 ggcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttttgt 1149878  T
Q  348 tgcatttttcgtcctaccccccattttattctcca-aaaacgtagagaaatgacagttttagacctaccccct 419  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  1149877 tgcatttttcgtcctaccccccattttattctccaaaaaacgcagagaaatgacagttttagacctaccccct 1149805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 251 - 417
Target Start/End: Original strand, 10899942 - 10900109
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900041  T
Q  351 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctacccc 417  Q
    ||||||||||||||| || ||||| |  ||||| ||||| ||||||||||||||||||||||||||||    
T  10900042 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctacccc 10900109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 251 - 424
Target Start/End: Complemental strand, 2322760 - 2322588
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    |||||||||||||||||||||||||||||| ||| |||||||||| ||| |||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2322661  T
Q  351 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||| ||||||||||||| |||||  ||||||||||||||||||||||| |||||| ||||    
T  2322660 atttttcgtcctacccctcattttattctcc-aaaacacagagaaatgacagttttagaccttccccctatgct 2322588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 245 - 408
Target Start/End: Original strand, 12935154 - 12935318
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12935154 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 12935253  T
Q  345 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  12935254 tgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 12935318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 249 - 424
Target Start/End: Complemental strand, 18505463 - 18505288
Alignment:
Q  249 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 348  Q
    ||||||||| |||||||||| ||||||||||| ||| ||||||||||| |||||||||||||||||| |||||||| ||| |||||||||||||||||||    
T  18505463 gcttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgtt 18505364  T
Q  349 gcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| | ||| ||||| ||||    
T  18505363 gcatttttcgtcctaccccccattttattctccaacaacgaagagaaatgacagttttaaatctaacccctatgct 18505288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 245 - 408
Target Start/End: Complemental strand, 11445535 - 11445371
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  11445535 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttt 11445436  T
Q  345 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||||||||| || ||||| |  ||| | ||||| |||||||||||||||||||    
T  11445435 tgttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 11445371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 245 - 408
Target Start/End: Complemental strand, 22219901 - 22219737
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22219901 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 22219802  T
Q  345 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||| ||||| || ||||| |  ||||| ||||  |||||||||||||||||||    
T  22219801 tgttgcatttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttag 22219737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 246 - 408
Target Start/End: Complemental strand, 23075675 - 23075512
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  23075675 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 23075576  T
Q  346 gttgcatttttcgtcctacccccca-ttttattctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||||| ||||| || | |||||  ||||||||| | |||||||||||||||||||    
T  23075575 gttgcatttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttag 23075512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 247 - 415
Target Start/End: Original strand, 23073998 - 23074155
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||            
T  23073998 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattat-------- 23074089  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 415  Q
       ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  23074090 ---catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctacc 23074155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 248 - 411
Target Start/End: Original strand, 4811372 - 4811535
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    |||||||||||||||||||||   || |||||| ||| |||||||||||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  4811372 ggcttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgt 4811471  T
Q  348 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacc 411  Q
    | ||||||||||| |||||||||||||||||| |||||||| ||| |||| |||||||||||||    
T  4811472 ttcatttttcgtcttaccccccattttattcttcaaaaacgcagataaataacagttttagacc 4811535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 251 - 408
Target Start/End: Original strand, 18504922 - 18505080
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||| |    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtttc 18505021  T
Q  351 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||| || ||||| |  ||| | ||| |||||||||||||||||||||    
T  18505022 atttttcgtcctacctcctattttcaaactctagaaatgtagagaaatgacagttttag 18505080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 247 - 408
Target Start/End: Original strand, 31470314 - 31470476
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    ||||||||||||||||||| || ||||||||||||||| |||||||||||||| ||| |||||||||||||||||||| ||||||||||||| |||||||    
T  31470314 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattatttttg 31470413  T
Q  347 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  31470414 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 31470476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 248 - 408
Target Start/End: Complemental strand, 18257682 - 18257521
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    |||||||||| |||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  18257682 ggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgt 18257583  T
Q  348 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    | |||||||||||||||| |  |||||    ||||| | |||||||||||||||||||||||    
T  18257582 tacatttttcgtcctacctcatattttccaactccatacacgtagagaaatgacagttttag 18257521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 247 - 408
Target Start/End: Complemental strand, 20741650 - 20741485
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcat---tt 343  Q
    ||||||||||||||| |||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||   ||    
T  20741650 aggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttt 20741551  T
Q  344 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    || ||||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||| ||||||    
T  20741550 tttttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttag 20741485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 247 - 417
Target Start/End: Original strand, 11276589 - 11276760
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||| ||| |||  |||||||||| ||| ||| ||||||| |||| ||||||||||||||||||||| |||| ||||||| |||||||||    
T  11276589 aggcttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcatttttg 11276688  T
Q  347 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctacccc 417  Q
    || |||||||||||||||| || ||||| |  ||||||||||| ||||||||||||||||||| ||||||||    
T  11276689 tttcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcctacccc 11276760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 250 - 388
Target Start/End: Original strand, 29033436 - 29033575
Alignment:
Q  250 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 349  Q
    ||||||||||||||||||| |||| |||||||||  |||||||| |||||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  29033436 cttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttg 29033535  T
Q  350 catttttcgtcctaccccccattttatt-ctccaaaaacg 388  Q
    ||  |||| |||||||||||||||| || |||||||||||    
T  29033536 cacatttcatcctaccccccatttttttcctccaaaaacg 29033575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 251 - 384
Target Start/End: Complemental strand, 3835268 - 3835135
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    ||||||||||||||||||   |||||||| |||| |||||||| ||||||||||  |||||||||||||||||  ||| || ||||||||||||||| ||    
T  3835268 ttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcatttttgtggc 3835169  T
Q  351 atttttcgtcctaccccccattttattctccaaa 384  Q
    |||||||||||||||||||||||||| |||||||    
T  3835168 atttttcgtcctaccccccattttatcctccaaa 3835135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 249 - 374
Target Start/End: Original strand, 15827639 - 15827766
Alignment:
Q  249 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaa--acggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||| |||||||||||| || ||||||||||||| ||| |||||||||||| ||||||  |||||| ||||| |||||||||||    
T  15827639 gcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttg 15827738  T
Q  347 ttgcatttttcgtcctaccccccatttt 374  Q
    ||||||||||||||||||| || |||||    
T  15827739 ttgcatttttcgtcctacctcctatttt 15827766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 250 - 388
Target Start/End: Complemental strand, 29035180 - 29035042
Alignment:
Q  250 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 349  Q
    ||||||||||||||| ||| ||||||||| ||||| |||||||| ||||  |||||||||||||||||||||||  ||| || | |||||||||||||||    
T  29035180 cttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttg 29035081  T
Q  350 catttttcgtcctaccccccattttattctccaaaaacg 388  Q
    |||||||||||| |||| ||||||| | |||||||||||    
T  29035080 catttttcgtcccaccctccattttttcctccaaaaacg 29035042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 18296142 - 18296284
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    ||||||||||||| | |||| ||| |||||||||| | || |||| ||| || |  |||||||||||||||||||||||| ||| |||| ||||||||||    
T  18296142 ttaggcttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcatttatcatttt 18296241  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacg 388  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  18296242 tgttgcatttttcgtccta-cccccattttatcctccaaaaacg 18296284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 246 - 336
Target Start/End: Original strand, 1149463 - 1149553
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaatt 336  Q
    |||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  1149463 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 248 - 374
Target Start/End: Complemental strand, 4811801 - 4811675
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    |||||||||| ||||||| || ||||||||||||||| ||| ||||||| || |||  ||||||||||||||||||||||| ||||||||||||||||||    
T  4811801 ggcttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgt 4811702  T
Q  348 tgcatttttcgtcctaccccccatttt 374  Q
    |||||||||| || |||| || |||||    
T  4811701 tgcatttttcatcatacctcctatttt 4811675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 419
Target Start/End: Complemental strand, 35163639 - 35163561
Alignment:
Q  341 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccct 419  Q
    ||||| ||||| |||| |||||||| || |||||   ||||||||||  ||||||||||||||||||| ||||||||||    
T  35163639 ttttttttgcagttttagtcctacctcctattttcaactccaaaaacacagagaaatgacagttttaggcctaccccct 35163561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 304
Target Start/End: Complemental strand, 22534270 - 22534214
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 304  Q
    ||||||||||||||||||||| |||| ||||| || | |||||||| ||||||||||    
T  22534270 ggcttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcctgcc 22534214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 151; Significance: 9e-80; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 246 - 424
Target Start/End: Complemental strand, 4754 - 4576
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  4754 taggcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcattttt 4655  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||    
T  4654 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 4576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 287 - 408
Target Start/End: Original strand, 4242 - 4364
Alignment:
Q  287 cacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaa 385  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||| || ||||| |  ||| ||||    
T  4242 cacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaa 4341  T
Q  386 acgtagagaaatgacagttttag 408  Q
    | | |||||||||||||||||||    
T  4342 atgcagagaaatgacagttttag 4364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 151; Significance: 9e-80; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 246 - 424
Target Start/End: Original strand, 19830418 - 19830596
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    |||| |||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  19830418 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19830517  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  19830518 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 19830596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 247 - 424
Target Start/End: Original strand, 37786766 - 37786943
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  37786766 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 37786865  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  37786866 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 37786943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 248 - 424
Target Start/End: Original strand, 19590525 - 19590701
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19590525 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19590624  T
Q  348 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||    
T  19590625 tgcatttttcatcctaccccccattttattctccaaaaacccagagaaatgacagttttagacctaccccctatgct 19590701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 245 - 419
Target Start/End: Complemental strand, 2659388 - 2659214
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    ||||||||||||||| |||||||| ||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2659388 ttaggcttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatttt 2659289  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccct 419  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2659288 tgttgcatttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccct 2659214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 247 - 416
Target Start/End: Original strand, 38858642 - 38858811
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    ||||||||| |||||||||||| |||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  38858642 aggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcatttttg 38858741  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 416  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  38858742 ttgcatttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 38858811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 251 - 424
Target Start/End: Complemental strand, 29100393 - 29100220
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    |||||||||||||||||| ||||||||||| ||| |||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  29100393 ttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 29100294  T
Q  351 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||    
T  29100293 attttttgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 29100220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 246 - 419
Target Start/End: Complemental strand, 35289448 - 35289275
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  35289448 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttg 35289349  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccct 419  Q
    ||||||||||||||| ||||||||||||||||||| ||||||| |||||||| | |||||||||||||||||||    
T  35289348 gttgcatttttcgtcataccccccattttattctctaaaaacgcagagaaataatagttttagacctaccccct 35289275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 248 - 419
Target Start/End: Complemental strand, 32005159 - 32004988
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| || ||||||||| || |||||||||||||| ||||||||||||| |||||||||||||| || |||||||||||||||    
T  32005159 ggcttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgt 32005060  T
Q  348 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccct 419  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  32005059 tgcatttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccct 32004988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 251 - 424
Target Start/End: Original strand, 4641443 - 4641616
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    |||||||||||||||||| |||||||||||| || |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  4641443 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcatttttgttgc 4641542  T
Q  351 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| |||||| ||||    
T  4641543 atttttcgtcctaccccccattttattctccaaaaatgcagagaaatgatagttttagacctgccccctatgct 4641616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 246 - 415
Target Start/End: Complemental strand, 34534338 - 34534169
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    |||||||||||| |||||||||  ||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||    
T  34534338 taggcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcattttt 34534239  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 415  Q
    |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  34534238 gttgcatttttcgtcctaccccccattttattctccaaaaaaacagagaaatgacagttttagacctacc 34534169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 245 - 408
Target Start/End: Complemental strand, 19591073 - 19590909
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19591073 ttaggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 19590974  T
Q  345 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  19590973 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 19590909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 254 - 417
Target Start/End: Complemental strand, 23953268 - 23953105
Alignment:
Q  254 attacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatt 353  Q
    |||||| |||||||| ||||||||||  ||| ||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 23953169  T
Q  354 tttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 417  Q
    ||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||    
T  23953168 tttcgtcataccccccattttattctccaaaaacgcagagaaataacagttttagacatacccc 23953105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 246 - 417
Target Start/End: Complemental strand, 4478247 - 4478076
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    |||| |||| |||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||| || |  ||| ||||||||||||||||    
T  4478247 taggtttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcattttt 4478148  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 417  Q
    ||||||||||||||| || ||| |||||||||||||||||||| |||||||| |||||||||||||||||||    
T  4478147 gttgcatttttcgtcttatccctcattttattctccaaaaacgcagagaaataacagttttagacctacccc 4478076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 245 - 408
Target Start/End: Complemental strand, 38859189 - 38859025
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  38859189 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttt 38859090  T
Q  345 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  38859089 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 38859025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 246 - 408
Target Start/End: Original strand, 2658837 - 2659000
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  2658837 taggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 2658936  T
Q  346 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||| |||| || ||||| |  ||||||||||| ||||||||| |||||||||    
T  2658937 gttgcatttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 2659000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 246 - 408
Target Start/End: Original strand, 34533789 - 34533952
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| |||||||||||||| |||| |||||||||||||||||||||    
T  34533789 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcattttt 34533888  T
Q  346 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||| ||||||||| || ||||| |  ||||||||||| |||||||||||| ||||||    
T  34533889 gttgcattttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttag 34533952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 246 - 407
Target Start/End: Original strand, 32004612 - 32004774
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||| || |||||||||||||||||||||||||| |||| ||||||||||||||||    
T  32004612 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcattttt 32004711  T
Q  346 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 407  Q
    ||||||||||||| |||||| || ||||| |  ||||| ||||| ||||||||||||||||||    
T  32004712 gttgcatttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 32004774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 245 - 406
Target Start/End: Complemental strand, 37787315 - 37787153
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    ||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||  |||||||||||||||    
T  37787315 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcatttt 37787216  T
Q  345 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttt 406  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||    
T  37787215 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 37787153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 4903163 - 4903050
Alignment:
Q  16 cagattgtgggaaaagtaatggtgatttttaactttttccaaccatcaattctacctagttaaccaccgtaagc-tccaatttgggatgagaataaattt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  4903163 cagattgtgggaaaagtaatggtgatttttaactttttccaaccatcaattctacctagttaaccactgtaagcttccaatttgggatgagaataaattt 4903064  T
Q  115 tatggattcctttt 128  Q
    ||||||||||||||    
T  4903063 tatggattcctttt 4903050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 261 - 408
Target Start/End: Original strand, 29099863 - 29100011
Alignment:
Q  261 ttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtc 360  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 29099962  T
Q  361 ctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||| || ||||| |  | ||| ||||||||| |||||||||||||||    
T  29099963 ctacctcctattttcaaaccccagaaacgtagataaatgacagttttag 29100011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 248 - 364
Target Start/End: Original strand, 35288903 - 35289019
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  35288903 ggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 35289002  T
Q  348 tgcatttttcgtcctac 364  Q
    |||||||||||||||||    
T  35289003 tgcatttttcgtcctac 35289019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 38160948 - 38161091
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| ||| ||||||||||| |||||||| |  ||||||||||||||||||||||||||  ||| ||||||||| |||||    
T  38160948 ttaggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattatttt 38161047  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacg 388  Q
    |||||||||||||||||||| ||||||||||| |||||||||||    
T  38161048 tgttgcatttttcgtcctactccccattttatcctccaaaaacg 38161091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 246 - 386
Target Start/End: Original strand, 28583437 - 28583577
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||||| ||||||||||||||| ||| || | |||| |||||||||||||||| || ||||| ||| ||||||||||||||||    
T  28583437 taggcttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcattttt 28583536  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaa 386  Q
     |||||||||||||||||||||||||||||| |||||||||    
T  28583537 attgcatttttcgtcctaccccccattttatcctccaaaaa 28583577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 249 - 388
Target Start/End: Complemental strand, 28584466 - 28584327
Alignment:
Q  249 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 348  Q
    |||||||||||||||| ||| ||||| |||||||||||||||||| ||||| || ||||||||||||||||||||  ||| |||||||||||||||||||    
T  28584466 gcttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgtt 28584367  T
Q  349 gcatttttcgtcctaccccccattttattctccaaaaacg 388  Q
    | |||||||||| ||||||||||||||| |||||||||||    
T  28584366 gtatttttcgtcttaccccccattttatcctccaaaaacg 28584327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 247 - 408
Target Start/End: Complemental strand, 19830965 - 19830804
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| ||||||||||||||| |||| |||||||||||| |||||||||||| |||||||||||  |||||||||||||||||    
T  19830965 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcatttttg 19830866  T
Q  347 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||| |||||||| || ||||| |  ||||| ||||  |||||||||||||||||||    
T  19830865 ttgcattttt-gtcctacctcctattttcaaactccagaaacacagagaaatgacagttttag 19830804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 245 - 365
Target Start/End: Original strand, 23952727 - 23952848
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcc-tattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattt 343  Q
    |||||||||||||||||||||||| |||||||||| || || |||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  23952727 ttaggcttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 23952826  T
Q  344 ttgttgcatttttcgtcctacc 365  Q
    | ||||||||||||||||||||    
T  23952827 tggttgcatttttcgtcctacc 23952848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 251 - 408
Target Start/End: Complemental strand, 4641983 - 4641828
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    |||||||||||||||||| ||||||||||||||| ||||   |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4641887  T
Q  351 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    || |||||||||||  || ||||| |  ||| | ||||| |||||||||||||||||||    
T  4641886 atatttcgtcctacgtcctattttcaaactctagaaacgcagagaaatgacagttttag 4641828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 4906540 - 4906435
Alignment:
Q  16 cagattgtgggaaaagtaatggtgatttttaactttttccaaccatcaattctacctagttaaccaccgtaagctccaatttgggatgagaataaatttt 115  Q
    |||||||||| |||||||||| ||||||||| |||||||||| || || ||||||||| |||||||| ||||||||| ||||||| ||||||||||||||    
T  4906540 cagattgtggaaaaagtaatgatgatttttacctttttccaagcaccagttctacctaattaaccacggtaagctcccatttgggctgagaataaatttt 4906441  T
Q  116 atggat 121  Q
    ||||||    
T  4906440 atggat 4906435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 417
Target Start/End: Complemental strand, 32427432 - 32427397
Alignment:
Q  382 aaaaacgtagagaaatgacagttttagacctacccc 417  Q
    ||||||| ||||||||||||||||||||||||||||    
T  32427432 aaaaacgcagagaaatgacagttttagacctacccc 32427397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 424
Target Start/End: Original strand, 35578902 - 35579074
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    |||||||||||||||||| | |  ||||| ||   |||| ||| ||||||||||  ||| |||  ||||||||| |||||  || |||||| ||| ||||    
T  35578902 ttaattacacttttggtcattgcattttgaccagctcacaaaaatggtcctgccactttcaaatcgaacaaaaccgtcata-aactatcatgttttttgc 35579000  T
Q  351 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    | ||||  ||||||  || |||||   ||||| ||||| |||||||||||| ||||||||||| ||||| ||||    
T  35579001 agttttaatcctacatcctattttcaactccagaaacgcagagaaatgacatttttagacctatcccctatgct 35579074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 424
Target Start/End: Complemental strand, 35579344 - 35579256
Alignment:
Q  336 tatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||| ||| ||||| |||| ||| |||| || |||||   ||| ||||||| || ||||| ||||||||||||||||||||| ||||    
T  35579344 tatcatgttttttgcagttttagtcatacctcctattttcaactctaaaaacgcagggaaataacagttttagacctaccccctatgct 35579256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 150; Significance: 4e-79; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 240 - 424
Target Start/End: Original strand, 12571855 - 12572040
Alignment:
Q  240 taaacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatc 339  Q
    |||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  12571855 taaatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatc 12571954  T
Q  340 atttttgttgcatttttcgtcct-accccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  12571955 atttttgttgcatttttcgtcctaaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 12572040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 245 - 424
Target Start/End: Complemental strand, 19176838 - 19176659
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19176838 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 19176739  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||| ||||    
T  19176738 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagacaaatgacagttttagacctaccacctatgct 19176659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 246 - 419
Target Start/End: Original strand, 41681132 - 41681304
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41681132 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 41681231  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccct 419  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| || ||||||||    
T  41681232 gttgcatttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttaaacataccccct 41681304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 239 - 424
Target Start/End: Complemental strand, 44831799 - 44831614
Alignment:
Q  239 ttaaacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattat 338  Q
    ||||| ||||||||||| |||||||||||| |||||||||||| || |||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  44831799 ttaaaattaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattat 44831700  T
Q  339 catttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||    
T  44831699 catttttgttgcatttttggtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 44831614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 241 - 415
Target Start/End: Original strand, 31133213 - 31133387
Alignment:
Q  241 aaacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatca 340  Q
    |||| ||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| |||||||||||||| |||||||| ||| ||||| |||||    
T  31133213 aaacataggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatca 31133312  T
Q  341 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 415  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31133313 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 31133387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 252 - 424
Target Start/End: Original strand, 13224645 - 13224816
Alignment:
Q  252 taattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgca 351  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||  || |||||||||||||||||||| |    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaa 13224743  T
Q  352 tttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  13224744 tttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 13224816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 247 - 424
Target Start/End: Complemental strand, 9930203 - 9930026
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||| ||||||||| |||| ||||| |||||||||||    
T  9930203 aggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcatttttg 9930104  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||    
T  9930103 ttgcatttttcgtcctaccccccattttattctccaaaagcgcagagaaatgatagttttagacctaccccctatgct 9930026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 245 - 417
Target Start/End: Original strand, 11656452 - 11656625
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||| |||||||| ||||||    
T  11656452 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccatttt 11656551  T
Q  345 tgttgcatttttcgtcctaccccccattttattctcc-aaaaacgtagagaaatgacagttttagacctacccc 417  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  11656552 tgttgcatttttcgtcctaccccccattttattctccaaaaaacgcagagaaatggcagttttagacctacccc 11656625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 251 - 424
Target Start/End: Original strand, 33328161 - 33328334
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  33328161 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 33328260  T
Q  351 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||||| | ||||||||||||||||||| | |||||||||||||||||||||||||||| ||||    
T  33328261 atttttcgtcctaccctcgattttattctccaaaaacgcaaagaaatgacagttttagacctaccccctatgct 33328334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 248 - 424
Target Start/End: Complemental strand, 9178180 - 9178005
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||| || |||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  9178180 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatttttgt 9178081  T
Q  348 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||| || || |||||||||||||||| ||||||| |||||||||||| ||||||||||||| ||| ||||    
T  9178080 tgcatttttcatctta-cccccattttattctcaaaaaacgcagagaaatgacaattttagacctacctcctatgct 9178005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 247 - 408
Target Start/End: Complemental strand, 13225185 - 13225023
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  13225185 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 13225086  T
Q  347 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  13225085 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 13225023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 245 - 408
Target Start/End: Original strand, 19176287 - 19176451
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  19176287 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 19176386  T
Q  345 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||||| ||| || ||||| |  ||||| ||||| |||||||||||| ||||||    
T  19176387 tgttgcatttttcgtccgacctcctattttcaaactccagaaacgcagagaaatgacaattttag 19176451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 247 - 408
Target Start/End: Original strand, 44831246 - 44831408
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| || |||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  44831246 aggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttg 44831345  T
Q  347 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  44831346 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttag 44831408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 248 - 365
Target Start/End: Complemental strand, 41681679 - 41681562
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  41681679 ggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgt 41681580  T
Q  348 tgcatttttcgtcctacc 365  Q
    ||||||||||||||||||    
T  41681579 tgcatttttcgtcctacc 41681562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 245 - 408
Target Start/End: Original strand, 33742919 - 33743082
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| |||||||||| |||| |||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||    
T  33742919 ttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaac-aaacggtctttcaattatcatttt 33743017  T
Q  345 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    || |||||||||||||||||| || ||||| || | ||| ||||| |||||||||||||||||||    
T  33743018 tgatgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 33743082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 251 - 408
Target Start/End: Original strand, 9928912 - 9929070
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    |||||||||||||||||| ||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  351 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||| ||  |||| |  ||||| ||||| ||||||||| |||||||||    
T  9929012 atttttcgtcctacctccttttttcaaactccagaaacgcagagaaatgtcagttttag 9929070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 247 - 408
Target Start/End: Complemental strand, 11657003 - 11656841
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| | |||||||||||||||||||| |||| |||||||||||||||||    
T  11657003 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcatttttg 11656904  T
Q  347 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||| ||||||||  |||||||||    
T  11656903 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatagcagttttag 11656841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 245 - 374
Target Start/End: Complemental strand, 34541096 - 34540967
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||| |||||||||||||||    
T  34541096 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttt 34540997  T
Q  345 tgttgcatttttcgtcctaccccccatttt 374  Q
    ||||||||||||||||||||| || |||||    
T  34540996 tgttgcatttttcgtcctacctcctatttt 34540967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 295 - 419
Target Start/End: Complemental strand, 33743417 - 33743293
Alignment:
Q  295 tggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagaga 394  Q
    |||| ||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33743417 tggttctgcctttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagaga 33743318  T
Q  395 aatgacagttttagacctaccccct 419  Q
    ||| |||||||||||||||| ||||    
T  33743317 aataacagttttagacctactccct 33743293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 249 - 407
Target Start/End: Complemental strand, 31133764 - 31133605
Alignment:
Q  249 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 348  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  31133764 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgtt 31133665  T
Q  349 gcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 407  Q
    |||||||||||| |||| || ||||| |  ||||| ||| | ||||||||||| ||||||    
T  31133664 gcatttttcgtcatacctcctattttcaaactccagaaatgcagagaaatgacggtttta 31133605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 251 - 424
Target Start/End: Complemental strand, 4630328 - 4630161
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    ||||||||||||||| || ||||||||||| ||| |||||||| |||||||||  ||||||||||||| | ||||||| |||||||||      ||||||    
T  4630328 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaattat------tgttgc 4630235  T
Q  351 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||    
T  4630234 atttttcatcctaccccccattttattctccaaaaacgcagaaaaatgacagttttagacctaccccctatgct 4630161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 251 - 408
Target Start/End: Complemental strand, 12572393 - 12572235
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    |||||||||||||||||| ||||||||||| ||| |||||||||| ||| ||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12572294  T
Q  351 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||| || ||||| |  ||||| ||||| ||||||||  |||||||||    
T  12572293 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaattgcagttttag 12572235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 250 - 408
Target Start/End: Complemental strand, 33328683 - 33328524
Alignment:
Q  250 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 349  Q
    |||||||| |||||||||| ||||||||| ||||| |||||||||| ||| ||| ||||||||||| |||||||||||| ||||||||||||||||||||    
T  33328683 cttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttg 33328584  T
Q  350 catttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||| ||| |||||||| |  ||||| ||||| ||||||||| |||||||||    
T  33328583 catttttcgtcccacctcccattttcaaactccagaaacgcagagaaatggcagttttag 33328524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 246 - 356
Target Start/End: Complemental strand, 11337069 - 11336959
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    |||||||||||||||||||||||||||||||||||| || |||||||| |||||| ||||||||||||||||| ||||||||| ||||||||||||||||    
T  11337069 taggcttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcattttt 11336970  T
Q  346 gttgcattttt 356  Q
    |||||||||||    
T  11336969 gttgcattttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 246 - 402
Target Start/End: Original strand, 4629795 - 4629952
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||| |||||||  |  |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4629795 taggcttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcattttt 4629894  T
Q  346 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacag 402  Q
     |||||||||||||| |||| || ||||| |  ||||| ||||| | |||||||||||    
T  4629895 attgcatttttcgtcttacctcctattttcaaactccagaaacgcaaagaaatgacag 4629952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 247 - 388
Target Start/End: Complemental strand, 8074097 - 8073957
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    ||||||| ||| |||||||||| |||||||||||||||||||||||| || || || ||||||||||||||||||||   || ||||||||||| |||||    
T  8074097 aggcttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatca-ttttg 8073999  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacg 388  Q
    ||||||||| ||||  | |||||||||||  |||||||||||    
T  8073998 ttgcattttacgtcaaaacccccattttaccctccaaaaacg 8073957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 245 - 386
Target Start/End: Original strand, 10918123 - 10918264
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    ||||| ||||||||| |||| ||| ||||||||||  ||| |||||||| ||||| ||||   |||||||||| |||||  ||| ||||| |||||||||    
T  10918123 ttaggtttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcatttt 10918222  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaa 386  Q
    ||||||||||||| || ||||||||||||||| |||||||||    
T  10918223 tgttgcatttttcatcataccccccattttatcctccaaaaa 10918264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 330 - 388
Target Start/End: Original strand, 43958267 - 43958325
Alignment:
Q  330 ttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 388  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  43958267 ttcaattatcatttttgttgcatttttcgtcctaccctctattttattctccaaaaacg 43958325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 340 - 408
Target Start/End: Original strand, 9177724 - 9177793
Alignment:
Q  340 atttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||||||||| ||| ||| |||||||| |  ||||| ||||| |||||||||||||||||||    
T  9177724 atttttgttgcatttttcatcccacctcccattttcaaactccagaaacgaagagaaatgacagttttag 9177793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 281
Target Start/End: Original strand, 9177665 - 9177700
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggc 281  Q
    ||||||||||||||||||||||| ||||||||||||    
T  9177665 taggcttaattacacttttggtcctcgtgttttggc 9177700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 43958206 - 43958254
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaa 293  Q
    |||| |||||||| |||||||||||||||||||||  ||| ||||||||    
T  43958206 ttagacttaattatacttttggtcttcgtgttttgatctactcacgaaa 43958254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 150; Significance: 4e-79; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 246 - 419
Target Start/End: Original strand, 11090519 - 11090692
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    |||| |||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11090519 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 11090618  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccct 419  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11090619 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccct 11090692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 245 - 424
Target Start/End: Original strand, 239350 - 239528
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  239350 ttaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 239448  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  239449 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 239528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 247 - 424
Target Start/End: Original strand, 40027139 - 40027316
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  40027139 aggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 40027238  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  40027239 ttgcattttttgtcctaccctccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 40027316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 245 - 425
Target Start/End: Complemental strand, 18451379 - 18451199
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||  ||| ||||| |||||||||    
T  18451379 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcatttt 18451280  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgctt 425  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  18451279 tgttgcatttttcttcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgctt 18451199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 248 - 424
Target Start/End: Original strand, 43058333 - 43058509
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    |||||||||||||||||| || ||||||||||||| | |||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  43058333 ggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgt 43058432  T
Q  348 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43058433 tgcatttttcgttctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 43058509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 246 - 413
Target Start/End: Original strand, 22374318 - 22374485
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  22374318 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 22374417  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagaccta 413  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||    
T  22374418 gttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgatagttttagaccta 22374485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 245 - 416
Target Start/End: Complemental strand, 40815893 - 40815722
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||||||||||  |||||||||||||||||||||||||| | |||||||||||||||    
T  40815893 ttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcatttt 40815794  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 416  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  40815793 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 40815722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 246 - 417
Target Start/End: Original strand, 1978106 - 1978277
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    |||||||||||||| |||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1978106 taggcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 1978205  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 417  Q
    ||||||||||| |||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1978206 gttgcattttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 1978277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 247 - 413
Target Start/End: Original strand, 26538096 - 26538262
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| |||||||||||| || ||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||    
T  26538096 aggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcatttttg 26538195  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagaccta 413  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||    
T  26538196 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaataacagttttagaccta 26538262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 245 - 417
Target Start/End: Complemental strand, 26538627 - 26538454
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  26538627 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcatttt 26538528  T
Q  345 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctacccc 417  Q
    |||||||||||||||||||||||||||||| |  | ||| ||||| ||||||||||||||||||||||||||||    
T  26538527 tgttgcatttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagttttagacctacccc 26538454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 251 - 419
Target Start/End: Original strand, 14432145 - 14432313
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    |||||||||||||||||| ||||||||||||||| ||| |||||||||| ||||||||||||| | |||||||||||| ||||| |||||||||||||||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgttgc 14432244  T
Q  351 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccct 419  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14432245 atttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccct 14432313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 248 - 419
Target Start/End: Original strand, 28616613 - 28616785
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  28616613 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 28616712  T
Q  348 tgcatttttcgtcctaccccccattttattctcc-aaaaacgtagagaaatgacagttttagacctaccccct 419  Q
    |||| ||||||||||||||||||||||||| ||| ||||||| ||||||||  ||||||||||||||||||||    
T  28616713 tgcaattttcgtcctaccccccattttattatccaaaaaacgcagagaaatagcagttttagacctaccccct 28616785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 245 - 424
Target Start/End: Original strand, 3025463 - 3025641
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    ||||| || |||||| |||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||    
T  3025463 ttaggtttgattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttt 3025562  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||||| |||||||||||||||| ||||||| | |||||||||||||||||||||||||||| ||||    
T  3025563 tgttgcatttttcgtccta-cccccattttattctcaaaaaacgcaaagaaatgacagttttagacctaccccctatgct 3025641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 251 - 417
Target Start/End: Complemental strand, 8425902 - 8425736
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    |||||||||||||||||  | ||||||||| ||| |||||||| ||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttgc 8425803  T
Q  351 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 417  Q
    |||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8425802 atttttcgtcttacccccaattttattctccaaaaacgcagagaaatgacagttttagacctacccc 8425736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 126 - 247
Target Start/End: Original strand, 16194936 - 16195057
Alignment:
Q  126 tttatgcaaatgcaggggagcacaatccttcttctctcatttaataatcaatatataaatgaaacccaatttagttaaggaagaccaggtatttcatgta 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  16194936 tttatgcaaatgcaggggagcacaatccttcttctctcatttaataatcaatatataaatgaaacccaatttagttaaggaagactaggtatttcatgta 16195035  T
Q  226 agtgtaacatgtattaaactta 247  Q
    ||||||||||||||||||||||    
T  16195036 agtgtaacatgtattaaactta 16195057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 247 - 404
Target Start/End: Original strand, 7446341 - 7446497
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    ||||||||||||||||||| || ||||||||||| ||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  7446341 aggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttta 7446440  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagtt 404  Q
    |||||||||||||| || |||||||||||||||||||||||| |||||||||||||||    
T  7446441 ttgcatttttcgtcata-cccccattttattctccaaaaacgcagagaaatgacagtt 7446497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 247 - 388
Target Start/End: Original strand, 20444748 - 20444889
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  20444748 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttttg 20444847  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacg 388  Q
    ||||| |||||||||||||||||||||||| |||||||||||    
T  20444848 ttgcagttttcgtcctaccccccattttatcctccaaaaacg 20444889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 245 - 408
Target Start/End: Complemental strand, 7446894 - 7446730
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    ||||||||||||||| ||||| || |||||||||| | || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7446894 ttaggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 7446795  T
Q  345 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||||||||| || ||||| |  ||||||||||| |||||||||||||||||||    
T  7446794 tgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 7446730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 20440579 - 20440437
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20440579 ttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcatttt 20440480  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacg 388  Q
    ||||||| ||||||||||| |||||| ||||| |||||||||||    
T  20440479 tgttgcagttttcgtcctatccccca-tttatcctccaaaaacg 20440437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 247 - 408
Target Start/End: Original strand, 18450829 - 18450991
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||     
T  18450829 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcatttttt 18450928  T
Q  347 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||| |||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  18450929 ttgcatttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 18450991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 241 - 408
Target Start/End: Original strand, 40815338 - 40815506
Alignment:
Q  241 aaacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatca 340  Q
    |||||| | ||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||  |||||||||||    
T  40815338 aaactttgtcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatca 40815437  T
Q  341 tttttgttgcatttttcgtcctacccccca-ttttattctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||||||||||||| || | |||||  ||||| ||||| |||||||||||||||||||    
T  40815438 tttttgttgcatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttag 40815506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 246 - 408
Target Start/End: Complemental strand, 22374872 - 22374709
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  22374872 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 22374773  T
Q  346 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||||||||||| || ||||| |  ||| | ||| | |||||||||||||||||||    
T  22374772 gttgcatttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttag 22374709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 251 - 408
Target Start/End: Complemental strand, 40027682 - 40027524
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    |||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  40027682 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 40027583  T
Q  351 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||| || ||||| |  ||||| ||||| || |||||| |||||||||    
T  40027582 atttttcgtcctacctcctattttcaaactccataaacgcagtgaaatggcagttttag 40027524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 249 - 388
Target Start/End: Complemental strand, 35781207 - 35781068
Alignment:
Q  249 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 348  Q
    ||||||||||||||||| || ||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||  || |||||||||||||||||||    
T  35781207 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgtt 35781108  T
Q  349 gcatttttcgtcctaccccccattttattctccaaaaacg 388  Q
    ||||||||||||||| |||||||||||| |||||||||||    
T  35781107 gcatttttcgtcctaacccccattttatcctccaaaaacg 35781068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 248 - 388
Target Start/End: Original strand, 35779708 - 35779848
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| |||||||||| | || |||||||| |||||||||| ||||||||||||||||||  ||| ||||||||||||||||||    
T  35779708 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgt 35779807  T
Q  348 tgcatttttcgtcctaccccccattttattctccaaaaacg 388  Q
    ||||||||| ||||||||||||||||||| |||||||||||    
T  35779808 tgcattttttgtcctaccccccattttatcctccaaaaacg 35779848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 245 - 408
Target Start/End: Complemental strand, 43058880 - 43058717
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    ||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||| ||||||||||| |||    
T  43058880 ttaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatca-ttt 43058782  T
Q  345 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  43058781 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 43058717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 246 - 408
Target Start/End: Complemental strand, 11091067 - 11090904
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||    
T  11091067 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattatt 11090968  T
Q  346 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||| ||||||||||||| | || ||||| |  ||||| ||||| ||| |||||||| ||||||    
T  11090967 gttgtatttttcgtcctatctcctattttcaaactccagaaacgcagataaatgacaattttag 11090904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 247 - 408
Target Start/End: Complemental strand, 28617160 - 28616998
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||| |||||||||||||||||||| |||| |||||||||||||||||    
T  28617160 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcatttttg 28617061  T
Q  347 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||||| |||| || ||||| |  ||||| ||||| ||||||||  |||||||||    
T  28617060 ttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagttttag 28616998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 249 - 408
Target Start/End: Complemental strand, 239896 - 239736
Alignment:
Q  249 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 348  Q
    ||||| |||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  239896 gcttagttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtt 239797  T
Q  349 gcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    || ||||||||| |||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  239796 gcgtttttcgtcatacctcctattttcaaactccagaaacgcagagaaatggcagttttag 239736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 246 - 374
Target Start/End: Complemental strand, 1978656 - 1978528
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||||| | ||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  1978656 taggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcattttt 1978557  T
Q  346 gttgcatttttcgtcctaccccccatttt 374  Q
    ||||||||||| |||||||| || |||||    
T  1978556 gttgcattttttgtcctacctcctatttt 1978528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 246 - 365
Target Start/End: Complemental strand, 28847242 - 28847123
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    |||||||||||||| |||||||| ||||||||||| ||| |||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  28847242 taggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcattttt 28847143  T
Q  346 gttgcatttttcgtcctacc 365  Q
    ||||||||||||||||||||    
T  28847142 gttgcatttttcgtcctacc 28847123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 250 - 388
Target Start/End: Original strand, 8972239 - 8972377
Alignment:
Q  250 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 349  Q
    ||||||||||||||||||| |||||||||||| |  |||||||| ||||| |||||||| ||||||||||||||  ||||||||||||||||||||||||    
T  8972239 cttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttg 8972338  T
Q  350 catttttcgtcctaccccccattttattctccaaaaacg 388  Q
    |||||||||| |||||||| ||||||| |||||||||||    
T  8972339 catttttcgttctaccccctattttatcctccaaaaacg 8972377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 251 - 407
Target Start/End: Original strand, 8425358 - 8425514
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    |||||||||||||||||| | ||||||||||||| |||||||| ||||| | || ||||||||||||||||||||||| |||||||||||||| ||||||    
T  8425358 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggtc-ttcaattatcatttgtgttgc 8425456  T
Q  351 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 407  Q
    ||||||||||||||| || ||||| |  ||||| ||| | ||||||||||||||||||    
T  8425457 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 8425514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 248 - 407
Target Start/End: Complemental strand, 3026006 - 3025848
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    |||||||||||| |||||||| |||||||||||| || |||||||| |||| |||||||||||||||| |||||||||||| ||||||||| ||||||||    
T  3026006 ggcttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatttttgt 3025909  T
Q  348 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 407  Q
    |||||||||||||||||| || ||||| |  ||||| ||| | ||||||||||||||||||    
T  3025908 tgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 3025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 250 - 389
Target Start/End: Complemental strand, 15552596 - 15552458
Alignment:
Q  250 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 349  Q
    ||||||||||||||||||| |  |||||||||||| |||||||| || ||| ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  15552596 cttaattacacttttggtcataatgttttggcctactcacgaaaatgatcc-gcccttttaaaacagaacaaaattgtcattcaattatcatttttgttg 15552498  T
Q  350 catttttcgtcctaccccccattttattctccaaaaacgt 389  Q
     |||||||||||||||| |||||||   ||||||||||||    
T  15552497 tatttttcgtcctaccctccattttgccctccaaaaacgt 15552458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 250 - 388
Target Start/End: Original strand, 15551501 - 15551639
Alignment:
Q  250 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 349  Q
    ||||||||||||||||||| |||||||||||  || |||||||| ||||| |||| |||||||||| |||||||  ||| |||| |||||||||||||||    
T  15551501 cttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttg 15551600  T
Q  350 catttttcgtcctaccccccattttattctccaaaaacg 388  Q
    |||||||||||| |||| ||||||||| |||||||||||    
T  15551601 catttttcgtccaaccctccattttatcctccaaaaacg 15551639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 245 - 408
Target Start/End: Complemental strand, 14432689 - 14432525
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||| |||||||||| |||||||| ||||||||||||||| ||| |||||||||| |||| ||||||||||||| |||| |||  ||||||||| |||||    
T  14432689 ttagccttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattatttt 14432590  T
Q  345 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||| ||||||| || ||||| |  ||| | ||||| |||||||||||||||||||    
T  14432589 tgttgcatttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 14432525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 245 - 424
Target Start/End: Complemental strand, 28143578 - 28143400
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||| ||||||||||| |||  ||||| ||   |||||||| ||||||||||  ||| |||  ||||||||  |||  | || |||||| ||    
T  28143578 ttaggcttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatgtt 28143479  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    | ||||| |||| |||||||  || |||||   ||||| ||||| |||||||||||||||||||||||||||||| ||||    
T  28143478 t-ttgcagttttagtcctacgtcctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 28143400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 149; Significance: 1e-78; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 248 - 424
Target Start/End: Complemental strand, 39556122 - 39555946
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||    
T  39556122 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgt 39556023  T
Q  348 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  39556022 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 39555946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 246 - 424
Target Start/End: Complemental strand, 31779199 - 31779021
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31779199 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 31779100  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||| ||||    
T  31779099 gttgcatttttcgtcccaccccccattttattctccaaaaacgcagagaaatgtcagttttagacgtaccccctatgct 31779021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 251 - 424
Target Start/End: Original strand, 41046703 - 41046876
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    |||||||||||||||||| ||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41046703 ttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41046802  T
Q  351 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  41046803 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 41046876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 244 - 419
Target Start/End: Original strand, 20840556 - 20840731
Alignment:
Q  244 cttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattt 343  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||    
T  20840556 cttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcattt 20840655  T
Q  344 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccct 419  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||    
T  20840656 ttgttgcatttttcgtcctaccccccattttattctccttaaacgcagagaaatgacagttttagacctaccccct 20840731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 246 - 424
Target Start/End: Original strand, 5136978 - 5137156
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    |||| |||||||||||||||||| ||||||||||||| | |||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  5136978 taggtttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 5137077  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  5137078 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 5137156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 245 - 424
Target Start/End: Complemental strand, 24301104 - 24300925
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||| |||||||||| |||||||||||| ||| | |||||||||    
T  24301104 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatttt 24301005  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  24301004 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 24300925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 247 - 424
Target Start/End: Original strand, 37726928 - 37727105
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| ||||||||||| ||  | ||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||    
T  37726928 aggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 37727027  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  37727028 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 37727105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 245 - 403
Target Start/End: Original strand, 48452986 - 48453144
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  48452986 ttaggcttgattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttt 48453085  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagt 403  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  48453086 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 247 - 424
Target Start/End: Original strand, 23644461 - 23644638
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| |||| |||||||||| |||||||| |||||||||| ||||||||||||||||||| ||| |||||||||||||||||    
T  23644461 aggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcatttttg 23644560  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||| ||||    
T  23644561 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 23644638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 245 - 424
Target Start/End: Complemental strand, 26837903 - 26837725
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| ||||||||||||||| | ||||||||||| ||||||||| |||| |||||||||||||||||||| |||||||||    
T  26837903 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgcccttt-aaaatagaacaaaacggtcattcaagtatcatttt 26837805  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||| ||||    
T  26837804 tgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacttaccccctatgct 26837725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 248 - 417
Target Start/End: Original strand, 43973441 - 43973610
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| |||||||||| |||| |||||||| || |  |||||||||||||||||||||||||||| ||||||||||||||||||    
T  43973441 ggcttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 43973540  T
Q  348 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 417  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||    
T  43973541 tgcatttttcgtcctaccccccattttattctccaaaaacgcagataaataacagttttagacctacccc 43973610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 248 - 419
Target Start/End: Complemental strand, 32535508 - 32535333
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatc-----att 342  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||     |||    
T  32535508 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattaaatt 32535409  T
Q  343 tttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccct 419  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||| |||||    
T  32535408 tttgttgcatttttcgtccta-cccccattttattctccaaaaacgcagagaaatgatagttttagacctaacccct 32535333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 245 - 424
Target Start/End: Original strand, 30104479 - 30104657
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| |||||||||| |||| |||||||| ||||||||||||||||||||| || | ||||||| |||||||||||||||    
T  30104479 ttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatttt 30104578  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||||| ||||||||||||| || ||||||| |||||||||||||||||||||||||||||| ||||    
T  30104579 tgttgcatttttcgtccta-cccccattttattatctaaaaacgcagagaaatgacagttttagacctaccccctatgct 30104657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 250 - 424
Target Start/End: Complemental strand, 25853770 - 25853596
Alignment:
Q  250 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 349  Q
    |||||||||||||||| || ||||||||||  ||| |||||||||||||| || | |||||||||||||||||| |||| ||||||||||||||||||||    
T  25853770 cttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttg 25853671  T
Q  350 catttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||    
T  25853670 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 25853596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 247 - 417
Target Start/End: Complemental strand, 27394123 - 27393953
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||  ||||||||| |||||||||||||||||||| || |||||||||||||||||    
T  27394123 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcatttttg 27394024  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 417  Q
    ||||||||| | |||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||    
T  27394023 ttgcattttccatcctacccccaattttattctccaaaaacgcagagaaataacagttttagacctacccc 27393953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 245 - 408
Target Start/End: Complemental strand, 43973988 - 43973824
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  43973988 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 43973889  T
Q  345 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||||||||| || ||||| || | ||| ||||| |||||||||||||||||||    
T  43973888 tgttgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 43973824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 245 - 408
Target Start/End: Original strand, 17464488 - 17464652
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  17464488 ttaggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 17464587  T
Q  345 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||||| |||||||||||||||||    
T  17464588 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgtaaagaaatgacagttttag 17464652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 252 - 424
Target Start/End: Complemental strand, 22425354 - 22425182
Alignment:
Q  252 taattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgca 351  Q
    ||||||||||||||||| |||||||| |||||| ||||||| |||||| ||||||| |||||||||||||||||||  ||||||||||||||||||||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  352 tttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| | | ||||||| ||||||||| ||||    
T  22425254 tttttcgtcctaccccccattttattctccaaaaacgcagagaaattagatttttagatctaccccctatgct 22425182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 245 - 424
Target Start/End: Complemental strand, 26275114 - 26274936
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    ||||| ||||||| | |||||| | | |||||||| |||| |||||||||||||||| |||||||||||||||| |||||||||  ||||||||||||||    
T  26275114 ttaggtttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcatttt 26275015  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||    
T  26275014 tgttgc-tttttcgtcctaccccccattttattctccaaaaccgcagagaaatgacagttttagacctaccccctatgct 26274936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 247 - 424
Target Start/End: Complemental strand, 17465038 - 17464860
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    ||||||||||||| |||||||| |||||||||||||||  || ||||||||||   ||||||||||| |||||||||||||| |||||||||||||||||    
T  17465038 aggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatcatttttg 17464939  T
Q  347 ttgcat-ttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||| |||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||| ||||    
T  17464938 ttgcatttttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacctaacccctatgct 17464860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 248 - 408
Target Start/End: Complemental strand, 37727475 - 37727314
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| || |||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  37727475 ggcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgt 37727376  T
Q  348 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  37727375 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 37727314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 247 - 408
Target Start/End: Complemental strand, 20841107 - 20840945
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  20841107 aggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttg 20841008  T
Q  347 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  20841007 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 20840945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 247 - 408
Target Start/End: Original strand, 27393660 - 27393822
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| |||||||||| |||| |||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  27393660 aggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttg 27393759  T
Q  347 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||||||||||||| ||||| |  | ||| ||||| |||||||||||||||||||    
T  27393760 ttgcatttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttag 27393822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 245 - 410
Target Start/End: Complemental strand, 29801964 - 29801798
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    ||||||||||||||||||||| || |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  29801964 ttaggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttt 29801865  T
Q  345 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagac 410  Q
    ||||||||||||||||| ||| || ||||| |  ||||| ||||| |||||||||||| ||||||||    
T  29801864 tgttgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagac 29801798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 247 - 408
Target Start/End: Original strand, 39555577 - 39555739
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||    
T  39555577 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttttg 39555676  T
Q  347 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||| ||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  39555677 ttgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 39555739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 246 - 408
Target Start/End: Complemental strand, 4275911 - 4275748
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||| || |||||||||||||    
T  4275911 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcattttt 4275812  T
Q  346 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  4275811 gttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 4275748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 247 - 408
Target Start/End: Original strand, 31778652 - 31778814
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||    
T  31778652 aggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttttg 31778751  T
Q  347 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  31778752 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 31778814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 251 - 388
Target Start/End: Complemental strand, 25612519 - 25612382
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    |||||||||||||||||| |||||||||| |||| |||||||| ||||||||||||||||||| |||||||||| ||| || ||||||||||||||||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgttgc 25612420  T
Q  351 atttttcgtcctaccccccattttattctccaaaaacg 388  Q
    |||||||||||||||||||||||||| |||||||||||    
T  25612419 atttttcgtcctaccccccattttatcctccaaaaacg 25612382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 248 - 408
Target Start/End: Complemental strand, 23645010 - 23644849
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    |||||||||| |||||||||| ||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23645010 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatttttgt 23644911  T
Q  348 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||| ||||||| || ||||| |  ||| |  |||| |||||||||||||||||||    
T  23644910 tgcatttttcatcctacctcctattttcaaactctagtaacgcagagaaatgacagttttag 23644849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 248 - 408
Target Start/End: Original strand, 25853234 - 25853395
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||| ||||| ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  25853234 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 25853333  T
Q  348 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||| ||||| || ||||| |  ||||| ||||| |||||||| ||||||||||    
T  25853334 tgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttag 25853395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 245 - 408
Target Start/End: Complemental strand, 5137529 - 5137365
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| ||||||||||||||| ||| ||||||||| |||||||||||||| ||||||||| |||| |||||||||||||||    
T  5137529 ttaggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 5137430  T
Q  345 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||| |||||| | || ||||| |  ||||| ||||| |||||||||||||||||||    
T  5137429 tgttgcatttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttag 5137365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 247 - 408
Target Start/End: Complemental strand, 30098309 - 30098147
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| |||||||||| | || |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||    
T  30098309 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 30098210  T
Q  347 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||||||| || ||||| |  || || ||||| ||||| |||||||||||||    
T  30098209 ttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagatatgacagttttag 30098147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 248 - 369
Target Start/End: Original strand, 29801356 - 29801477
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| |||||||||||| || |||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  29801356 ggcttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 29801455  T
Q  348 tgcatttttcgtcctacccccc 369  Q
    ||||||||||||| ||||||||    
T  29801456 tgcatttttcgtcttacccccc 29801477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 245 - 408
Target Start/End: Original strand, 22424811 - 22424975
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||  ||||||||  ||||| | ||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||    
T  22424811 ttaggcttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcatttt 22424910  T
Q  345 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  22424911 tgttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttag 22424975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 251 - 374
Target Start/End: Original strand, 32534962 - 32535085
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    |||||||||||||||||| |||||||||||| || |||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  32534962 ttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 32535061  T
Q  351 atttttcgtcctaccccccatttt 374  Q
    ||||||||||||||| || |||||    
T  32535062 atttttcgtcctacctcctatttt 32535085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 248 - 388
Target Start/End: Complemental strand, 50116954 - 50116814
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    |||||||||||||||||| || |||||||||| | || |||||||| ||||| ||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  50116954 ggcttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgt 50116855  T
Q  348 tgcatttttcgtcctaccccccattttattctccaaaaacg 388  Q
    |||| |||||||||||||||||||||| | |||||||||||    
T  50116854 tgcaattttcgtcctaccccccattttttcctccaaaaacg 50116814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 246 - 408
Target Start/End: Original strand, 26837358 - 26837521
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    |||| ||||||||| |||||||| | || |||||||||| |||||||| |||||||||||||||| |||| ||| |||||||| ||||||||||||||||    
T  26837358 taggtttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcattttt 26837457  T
Q  346 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  26837458 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 26837521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 251 - 408
Target Start/End: Original strand, 24300560 - 24300717
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    ||||||||| ||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||  |||||||||||||||||||||    
T  24300560 ttaattacatttttggtct-cgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcatttttgttgc 24300658  T
Q  351 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    | ||||||||| ||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  24300659 aattttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacagttttag 24300717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 248 - 387
Target Start/End: Complemental strand, 23228552 - 23228414
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    |||||||||||||||||||||  |||||||||||||| |||||||| || || |||||||||||||| ||||||||  ||| |||||||||||||||| |    
T  23228552 ggcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaac-gaacaaaattgtccttcaattatcatttttat 23228454  T
Q  348 tgcatttttcgtcctaccccccattttattctccaaaaac 387  Q
    |||||||||||||||||| |||||||||| ||||||||||    
T  23228453 tgcatttttcgtcctacctcccattttatcctccaaaaac 23228414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 251 - 408
Target Start/End: Original strand, 26274570 - 26274728
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    ||||||||| ||||| || | || |||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26274570 ttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26274669  T
Q  351 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||| |||| || ||||| |  ||||| ||||| ||  |||||||||||||||    
T  26274670 atttttcgtcatacctcctattttcaaactccagaaacgcagttaaatgacagttttag 26274728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 251 - 408
Target Start/End: Complemental strand, 41047239 - 41047083
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    ||||||||||||| | ||||| |||||||||||| ||||||||||||| ||| ||||||||||||||| ||||| ||| |||||||||||||||||||||    
T  41047239 ttaattacactttcg-tcttcatgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaac-gtccttcaattatcatttttgttgc 41047142  T
Q  351 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    ||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  41047141 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 41047083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 249 - 389
Target Start/End: Complemental strand, 32697244 - 32697105
Alignment:
Q  249 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 348  Q
    ||||||||| | |||||||| ||||||||| ||||| |||||||| | |||  ||||||||||||||||||||||  ||  |||||||||||||||||||    
T  32697244 gcttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgtt 32697145  T
Q  349 gcatttttcgtcctaccccccattttattctccaaaaacgt 389  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  32697144 gcatttttcgtcctac-ccccattttatcctccaaaaacgt 32697105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 51474882 - 51474738
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||   ||||||||||| || |||||||| ||||| ||||||||||||||| |||||||  ||| || | ||||||||||    
T  51474882 ttaggcttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcatttt 51474783  T
Q  345 tgttgcatttttcgtcctacccccca-ttttattctccaaaaacg 388  Q
    |||||||||||||||||||||||| | |||||| |||||||||||    
T  51474782 tgttgcatttttcgtcctacccccaatttttatcctccaaaaacg 51474738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 249 - 362
Target Start/End: Original strand, 51473429 - 51473542
Alignment:
Q  249 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 348  Q
    |||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||  ||| |||  ||||||||||||||    
T  51473429 gcttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgtt 51473528  T
Q  349 gcatttttcgtcct 362  Q
    ||| |||| |||||    
T  51473529 gcacttttggtcct 51473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 246 - 388
Target Start/End: Original strand, 37220555 - 37220697
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||||| |||| |||||||||| |||| | |  | || ||| |||||||||||||| ||||  ||| |||| |||||||||||    
T  37220555 taggcttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcattttt 37220654  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaacg 388  Q
    |||||| |||||||||||||| ||||||||| |||||||||||    
T  37220655 gttgcacttttcgtcctaccctccattttatcctccaaaaacg 37220697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 246 - 386
Target Start/End: Original strand, 45965936 - 45966076
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||||| |||||||||||| || |||||||  |  |||||| ||||||||||| |||||||  ||| ||| |||||||||| |    
T  45965936 taggcttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgt 45966035  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaa 386  Q
    |||||||||||||| ||| |||||||||| | |||||||||    
T  45966036 gttgcatttttcgttctaacccccattttctcctccaaaaa 45966076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 250 - 386
Target Start/End: Complemental strand, 25420684 - 25420548
Alignment:
Q  250 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 349  Q
    |||||||||||||||| || |||| ||||| |||| |||||||| || ||  |||||||||||| |||| ||||  ||| ||||||||| ||||||||||    
T  25420684 cttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttg 25420585  T
Q  350 catttttcgtcctaccccccattttattctccaaaaa 386  Q
    ||||||||||| ||||||||||||||| || ||||||    
T  25420584 catttttcgtcataccccccattttatccttcaaaaa 25420548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 273 - 376
Target Start/End: Complemental strand, 18010265 - 18010162
Alignment:
Q  273 tgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctaccccccatt 372  Q
    |||||| | ||| |||||||| |||| | ||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||| ||| |||||    
T  18010265 tgttttcgtctactcacgaaaatggttccgcccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcctgccctccatt 18010166  T
Q  373 ttat 376  Q
    ||||    
T  18010165 ttat 18010162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 249 - 388
Target Start/End: Original strand, 25419145 - 25419284
Alignment:
Q  249 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggt-cattcaattatca-tttttg 346  Q
    |||| |||| |||||||||||||||||||| || || |||||||| | || ||||||||||||||||||||||||| || | ||||||||||| |||||     
T  25419145 gcttgattatacttttggtcttcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaattatcattttttt 25419244  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacg 388  Q
    ||||| |||| |||||  |||||||||||  |||||||||||    
T  25419245 ttgcagttttagtccttacccccatttta--ctccaaaaacg 25419284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 37222118 - 37222040
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaac 324  Q
    ||||||||||||||||||||||| |||||||||| |||| |||| ||| |||||||||| |||||||||||||||||||    
T  37222118 taggcttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaac 37222040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 247 - 388
Target Start/End: Original strand, 23227261 - 23227396
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    ||||| ||||| |||||||||||  |||||||||| || |||||||| |||||||       | ||||||||||||   ||| | ||||| |||||||||    
T  23227261 aggctcaattagacttttggtctctgtgttttggcttactcacgaaaatggtcctc------tgaaacagaacaaatttgtcctccaattttcatttttg 23227354  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacg 388  Q
    |||||||||||||||| | ||||||||||| |||||||||||    
T  23227355 ttgcatttttcgtccttctccccattttatcctccaaaaacg 23227396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 364 - 415
Target Start/End: Original strand, 29801532 - 29801583
Alignment:
Q  364 ccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 415  Q
    |||||||||||||||| |||||| | ||||||||||||||||||||| ||||    
T  29801532 ccccccattttattcttcaaaaatgcagagaaatgacagttttagacatacc 29801583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 424
Target Start/End: Original strand, 49407793 - 49407971
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| |||  ||||| ||   |||||||| ||||| ||||  ||| ||| |||||||||| |||  | || | |   |||    
T  49407793 ttaggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaactttatgttt 49407892  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||  || |||| ||| |||| || |||||   ||||||||||| |||||||||||| ||||||||||||||||| ||||    
T  49407893 tgta-cagttttagtcatacctcctattttcaactccaaaaacgcagagaaatgacaattttagacctaccccctatgct 49407971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 424
Target Start/End: Original strand, 55192222 - 55192293
Alignment:
Q  353 ttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||| |||||||| || |||||   ||||| ||||| |||||||||||||||||||||||||||||| ||||    
T  55192222 ttttagtcctacctcctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 55192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 417
Target Start/End: Complemental strand, 27200240 - 27200069
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| | |  ||||| ||   |||||||| |||| |||||  ||| |||  |||||| || ||| |  || |||||| ||    
T  27200240 ttaggcttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgtccta-aactatcatgtt 27200142  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 417  Q
    | ||||| |||| ||| |||| || |||||   ||||| ||||| ||||||||||||| ||||||||||||||    
T  27200141 ttttgcagttttagtcatacctcctattttcaactccagaaacgcagagaaatgacaggtttagacctacccc 27200069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 375
Target Start/End: Original strand, 32695706 - 32695830
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    ||||||||| |||||||| || | |||||||||| | |||||| || |  || | ||||||||||||||||||  ||| | | ||||| |||||||||||    
T  32695706 ttaattacatttttggtcctcatattttggcctacttacgaaattgattatgtctttttaaaacagaacaaaattgtcctacgattattatttttgttgc 32695805  T
Q  351 atttttcgtcctaccccccatttta 375  Q
    | |||| |||||  ||| |||||||    
T  32695806 aattttagtccttaccctcatttta 32695830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 424
Target Start/End: Original strand, 37075781 - 37075864
Alignment:
Q  341 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||| ||||| |||| |||||||| |  |||||   ||||| ||||| ||||||||||| |||||||||||||||||| ||||    
T  37075781 ttttttttgcagttttagtcctacctcttattttcaactccagaaacgcagagaaatgaccgttttagacctaccccctatgct 37075864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 301
Target Start/End: Complemental strand, 52375880 - 52375824
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcct 301  Q
    |||||||||||||||||||||||| |||  ||||| || | |||||||| |||||||    
T  52375880 ttaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcct 52375824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 301
Target Start/End: Complemental strand, 55390146 - 55390090
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcct 301  Q
    |||||||||||||||||||||||| |||  ||||  || |||||||||| |||||||    
T  55390146 ttaggcttaattacacttttggtcctcgcattttaaccaattcacgaaaatggtcct 55390090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 146; Significance: 9e-77; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 246 - 419
Target Start/End: Original strand, 1665 - 1838
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||    
T  1665 taggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcattttt 1764  T
Q  346 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccct 419  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1765 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccct 1838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 242 - 408
Target Start/End: Complemental strand, 2218 - 2051
Alignment:
Q  242 aacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcat 341  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2218 aacttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcat 2119  T
Q  342 ttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    |||||||||||||||||||||||| || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  2118 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 245 - 424
Target Start/End: Complemental strand, 134221 - 134042
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| ||| ||||||||||| ||||||||||||| || |||||||| ||||||    
T  134221 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacatttt 134122  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  134121 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 134042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 139; Significance: 1e-72; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 247 - 425
Target Start/End: Original strand, 64301 - 64479
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||||||||||||||||||| |||||||||| | || ||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  64301 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcatttttg 64400  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgctt 425  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  64401 ttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgctt 64479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 251 - 363
Target Start/End: Complemental strand, 64847 - 64735
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||    
T  64847 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 64748  T
Q  351 atttttcgtccta 363  Q
    |||||||||||||    
T  64747 atttttcgtccta 64735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 424
Target Start/End: Complemental strand, 205911 - 205738
Alignment:
Q  250 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 349  Q
    ||||||||||||||| ||| ||   ||||| || | |||||||| ||||||||||  ||| |||  ||||||||| |||  | || |||||| ||| |||    
T  205911 cttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatgttt-ttg 205813  T
Q  350 catttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    || |||| |||||||  || |||||   ||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  205812 cagttttagtcctacgtcctattttcaactccaaaaacgcagagaaatggcagttttagacctaccccctatgct 205738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 136; Significance: 8e-71; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 250 - 417
Target Start/End: Original strand, 755 - 921
Alignment:
Q  250 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 349  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  755 cttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttgttg 853  T
Q  350 catttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 417  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||    
T  854 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacatacccc 921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 248 - 417
Target Start/End: Complemental strand, 1286 - 1116
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||| ||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1286 ggcttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 1187  T
Q  348 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctacccc 417  Q
    ||||| |||||||||||| || ||||| |  | ||| ||||| ||| ||||| |||||||||||| |||||    
T  1186 tgcatctttcgtcctacctcctattttcaaaccccagaaacgcagaaaaatggcagttttagacccacccc 1116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 121; Significance: 8e-62; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 245 - 424
Target Start/End: Complemental strand, 42706 - 42528
Alignment:
Q  245 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 344  Q
    ||||||||||||| |||||||| | ||||||||||| ||| ||| ||||||| | ||||||||||||||||||||||||||||| |||| ||||||||||    
T  42706 ttaggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcatttt 42607  T
Q  345 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  42606 tgtttcatttttcgtcctac-ccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 42528  T

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Target: scaffold0027; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 251 - 417
Target Start/End: Original strand, 42172 - 42339
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    |||||||||||||| ||  ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  42172 ttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttgc 42271  T
Q  351 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctacccc 417  Q
    |||||| ||| |||| || ||||| |  || || ||||| ||||||||||||||||||||||||||||    
T  42272 attttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacctacccc 42339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 118; Significance: 5e-60; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 251 - 424
Target Start/End: Complemental strand, 10414 - 10242
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    |||||||||||||||||| ||||||||||| ||| |||||||||||||  | |||||||||||||||||||||||||| |||||||||||||||||||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  351 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    |||||||||||||| |||||||||||||||||||||   |||||||||||||||||| ||||||||||| ||||    
T  10314 atttttcgtcctac-ccccattttattctccaaaaattcagagaaatgacagttttaaacctaccccctatgct 10242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 251 - 355
Target Start/End: Original strand, 9935 - 10039
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    ||||||||| |||||||| ||||||||| ||||||||||||||||| || ||||||||||| | ||||||||| |||| ||||||||||| ||||||| |    
T  9935 ttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaattttgttac 10034  T
Q  351 atttt 355  Q
    |||||    
T  10035 atttt 10039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 115; Significance: 3e-58; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 270 - 424
Target Start/End: Original strand, 10643 - 10797
Alignment:
Q  270 tcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctacccccc 369  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||| ||    
T  10643 tcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccctcc 10742  T
Q  370 attttattctccaaaaacgtagagaaatgacagttttagacctaccccctttgct 424  Q
    ||||||||||||||||| | ||||||||||||||||||||| |||||||| ||||    
T  10743 attttattctccaaaaatgcagagaaatgacagttttagacgtaccccctatgct 10797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 248 - 374
Target Start/End: Complemental strand, 11168 - 11042
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 347  Q
    ||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  11168 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgt 11069  T
Q  348 tgcatttttcgtcctaccccccatttt 374  Q
    |||||||||||||||||| || |||||    
T  11068 tgcatttttcgtcctacctcctatttt 11042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 109; Significance: 1e-54; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 247 - 415
Target Start/End: Original strand, 18834 - 19001
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||||| ||||||||||||||| |  |||||||||||| |||||||||||||| ||||||||||||||| |||||||||||  |||||||||||||||||    
T  18834 aggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcatttttg 18933  T
Q  347 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 415  Q
    ||||||||||| ||||| |||||||||||||||||||||||| |||||||| |||||||||||| ||||    
T  18934 ttgcatttttcatccta-cccccattttattctccaaaaacgcagagaaataacagttttagacttacc 19001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 248 - 345
Target Start/End: Complemental strand, 19166 - 19069
Alignment:
Q  248 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 345  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19166 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 247 - 374
Target Start/End: Complemental strand, 28789 - 28662
Alignment:
Q  247 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 346  Q
    |||| ||||||||||||||||| ||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  28789 aggcataattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 28690  T
Q  347 ttgcatttttcgtcctaccccccatttt 374  Q
    ||||| |||||||||| |||||||||||    
T  28689 ttgcagttttcgtccttccccccatttt 28662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 89; Significance: 9e-43; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 316 - 424
Target Start/End: Original strand, 16564 - 16672
Alignment:
Q  316 gaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 415  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16564 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 16663  T
Q  416 ccctttgct 424  Q
    |||| ||||    
T  16664 ccctatgct 16672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 265 - 408
Target Start/End: Complemental strand, 17024 - 16880
Alignment:
Q  265 ggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctac 364  Q
    |||| |||||||||| | || ||||||||||| ||| ||| ||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||    
T  17024 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 16925  T
Q  365 cccccatttt-attctccaaaaacgtagagaaatgacagttttag 408  Q
    | || ||||| |  ||||| ||||| |||||||| ||||||||||    
T  16924 ctcctattttcaaactccagaaacgcagagaaattacagttttag 16880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 84; Significance: 9e-40; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 249 - 388
Target Start/End: Original strand, 568 - 707
Alignment:
Q  249 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 348  Q
    ||||||||||||||||| || ||||||||||||||| |||||||| || || |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  568 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgtt 667  T
Q  349 gcatttttcgtcctaccccccattttattctccaaaaacg 388  Q
    | ||||||||||  ||| ||||||| || |||||||||||    
T  668 gtatttttcgtctcacctcccatttgatcctccaaaaacg 707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 251 - 388
Target Start/End: Complemental strand, 62000 - 61863
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    ||||||||||||||| || ||||||||||| ||| |||||||| ||||||| ||||||||||| |||||||||   |||||||| |||||||||||||      
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgttat 61901  T
Q  351 atttttcgtcctaccccccattttattctccaaaaacg 388  Q
    |||||||||||||||||||||||| | |||||||||||    
T  61900 atttttcgtcctaccccccattttgtcctccaaaaacg 61863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 61026 - 61102
Alignment:
Q  246 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaa 322  Q
    ||||||||| |||||||||| || ||||||||||||||| |||||||| || ||||||| |||||||| ||||||||    
T  61026 taggcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaa 61102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 252 - 388
Target Start/End: Original strand, 454 - 588
Alignment:
Q  252 taattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgca 351  Q
    |||||||| |||||||||||||||||||||||| |||||||| ||||| ||  ||||||||||| |||| ||  ||| ||||||||||||||||||||||    
T  454 taattaca-ttttggtcttcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgca 552  T
Q  352 tttttcgtcctaccccccattttattctccaaaaacg 388  Q
    |||||||||||| | |||||||||| ||| |||||||    
T  553 tttttcgtccta-cacccattttatcctcaaaaaacg 588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 251 - 351
Target Start/End: Complemental strand, 8551 - 8451
Alignment:
Q  251 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 350  Q
    ||||||||||||||||||||| |||||||| ||| | |||||||||||||| ||||||||||||| | |||||||||| |||||||||||||||||||||    
T  8551 ttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcatttttgttgc 8452  T
Q  351 a 351  Q
    |    
T  8451 a 8451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 297 - 388
Target Start/End: Complemental strand, 7784 - 7693
Alignment:
Q  297 gtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 388  Q
    ||||| |||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  7784 gtccttcccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctaccccctattttatcctccaaaaacg 7693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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