View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21692_high_23 (Length: 313)
Name: NF21692_high_23
Description: NF21692
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21692_high_23 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 5 - 313
Target Start/End: Complemental strand, 11462839 - 11462531
Alignment:
| Q |
5 |
aggaggagcacagacaaaccagagaaggtaaaaaactcgtcttctagtaatggtggcgatatgttggagaaattgagaatgacatttgatcataaagaga |
104 |
Q |
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| T |
11462839 |
aggaagagcacagacaaaccagagaaggtaaaaaactcgtcttccagtaatggtggtgatatgttggagaaattaagaatgacgtttgatcataaagaga |
11462740 |
T |
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| Q |
105 |
gatctcggagaagtgtcgactgtcatgaaaagtctcgaaaaagcgttgatcatcaattagaaaaaggaaggaagagcgttgacagactcgacagaataag |
204 |
Q |
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| T |
11462739 |
gatctcggagaagtgttgactgtcatgaaaagtctcgaaaaagtgttgatcatcaattagaaaaaggaaggaagagcgttgaccgactcgacagaataag |
11462640 |
T |
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| Q |
205 |
gactggttaattcttcttgtattgaagttatattcgtgcgcacgggattggtcttttttgttaattttttatattggtctaattgctgtgtagtatacta |
304 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11462639 |
gactggttaattcttcttgtattgaagttatattcgtgcacacgggattggtcttttttgttaattttttatattggtctaattgctgtgtagtatactg |
11462540 |
T |
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| Q |
305 |
cactttggc |
313 |
Q |
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| T |
11462539 |
cactttggc |
11462531 |
T |
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