View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21692_high_7 (Length: 359)
Name: NF21692_high_7
Description: NF21692
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21692_high_7 |
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Alignment Details
Target: chr4 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 10 - 348
Target Start/End: Original strand, 27581340 - 27581678
Alignment:
| Q |
10 |
gtttcaggccttgttgtgttgtgctgaggaagagtttggttttgaacacccaatgggaaatattgttattccatgttccattgactattttgttactctt |
109 |
Q |
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| T |
27581340 |
gtttcaggccttgttgtgttgtgctgaggaagagtttggttttgaacatccaatgggaaatattgttattccatgttccattgactattttgttactctt |
27581439 |
T |
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| Q |
110 |
acttctcgtttcaatgtctcataagtatatatataccacactaatttgtatttgatgtatatgatatgtgagaaaaataagatcgtgtatatctcactct |
209 |
Q |
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| T |
27581440 |
acttctcgtttcaatgtctcataagtatatatataccacactaatttgtatttgatgtatatgatatgtgagaaaaataagatcgtgtatatctcactct |
27581539 |
T |
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| Q |
210 |
tttgaagtgagtaattatcgtttcaatggttgatttttgtcattaannnnnnncttttaaggtgaattactatttaattgcttttagatgaatgaaacta |
309 |
Q |
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| T |
27581540 |
tttgaagtgagtaattatcgtttcaatggttgatttttgtcattaatttttttcttttaaggtgaattactatttaattgcttttagatgaatgaaacta |
27581639 |
T |
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| Q |
310 |
atactccaaatgttattttattcatagcattccttctct |
348 |
Q |
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| T |
27581640 |
atactccaaatgttattttattcatagcattccttctct |
27581678 |
T |
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