View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21693_high_12 (Length: 358)
Name: NF21693_high_12
Description: NF21693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21693_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 324; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 1 - 343
Target Start/End: Complemental strand, 107136 - 106793
Alignment:
| Q |
1 |
gcggaaggcaaggctctttcttgcttgtagcaagtgaggagggaaattttaagcgacctaacgaatgatatttatagtttgagatgaaattttcgatgat |
100 |
Q |
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| T |
107136 |
gcggaaggcaaggctctttcttgcttgtagcaagtgaggagggaaattttaagcgacctaacgaatgatatttatagtttgagatgaaattttcgatgat |
107037 |
T |
|
| Q |
101 |
tataatttcagagacgaaattgtctattcactccattaatgttttgttggatgtatttgagactcgagtaatattatgaataagattgaaaagaaaagag |
200 |
Q |
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|||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
107036 |
tataatttcagagacgaaattgtccattctctccattaatgttttgttggatgtatttgagactcgagtaatattatgaataagattgaaaagaaaagag |
106937 |
T |
|
| Q |
201 |
ttaaacatctgtcaaaaaataatgagacaaaaagatagcagtggtc-atggtctaagtctgaattctccaatatcacttcttttaatgaagagatgatga |
299 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
106936 |
ttaaacatctgtcaaaaaataatgagacaaaaagatagcagtggtctatggtctaagtctgaattctccaatatcacttcttttaatgaagagatgatga |
106837 |
T |
|
| Q |
300 |
tataggactacaaaggtaaatctttggtgctgatgatgtccatc |
343 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
106836 |
tataggactacaaaggtaaatctttggtgctgttgatgtccatc |
106793 |
T |
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