View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21693_high_8 (Length: 388)

Name: NF21693_high_8
Description: NF21693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21693_high_8
NF21693_high_8
[»] chr1 (12 HSPs)
chr1 (22-388)||(4048443-4048809)
chr1 (86-176)||(43427401-43427491)
chr1 (36-83)||(28037679-28037726)
chr1 (22-99)||(7386682-7386759)
chr1 (30-107)||(39501135-39501212)
chr1 (30-100)||(14651010-14651077)
chr1 (30-100)||(14660801-14660868)
chr1 (34-101)||(49508557-49508624)
chr1 (38-101)||(45432812-45432875)
chr1 (34-100)||(33978180-33978246)
chr1 (22-99)||(27643355-27643432)
chr1 (54-107)||(38599037-38599090)
[»] chr2 (12 HSPs)
chr2 (22-107)||(37670695-37670780)
chr2 (42-99)||(4244397-4244454)
chr2 (30-95)||(8323530-8323595)
chr2 (30-107)||(10748060-10748137)
chr2 (85-153)||(17247364-17247432)
chr2 (34-100)||(36756954-36757020)
chr2 (22-83)||(33054866-33054927)
chr2 (34-101)||(43115039-43115106)
chr2 (37-101)||(648532-648596)
chr2 (39-101)||(30928232-30928294)
chr2 (36-101)||(4017117-4017182)
chr2 (36-101)||(24467313-24467378)
[»] chr8 (8 HSPs)
chr8 (30-107)||(9180724-9180801)
chr8 (30-107)||(11629510-11629587)
chr8 (22-100)||(10394649-10394727)
chr8 (30-107)||(34752683-34752760)
chr8 (25-101)||(5896301-5896377)
chr8 (22-153)||(32229983-32230114)
chr8 (22-99)||(16484140-16484217)
chr8 (36-101)||(35613624-35613689)
[»] chr6 (4 HSPs)
chr6 (30-107)||(10158948-10159025)
chr6 (30-72)||(14453394-14453436)
chr6 (30-100)||(21729825-21729895)
chr6 (39-108)||(25357649-25357718)
[»] chr4 (11 HSPs)
chr4 (30-107)||(42327896-42327973)
chr4 (145-346)||(26021769-26021970)
chr4 (45-158)||(39956211-39956324)
chr4 (22-99)||(43733928-43734005)
chr4 (34-107)||(32499556-32499629)
chr4 (49-101)||(42440985-42441038)
chr4 (36-83)||(5185480-5185527)
chr4 (39-113)||(16430971-16431045)
chr4 (34-100)||(54421407-54421473)
chr4 (34-98)||(23600141-23600205)
chr4 (41-89)||(38761389-38761437)
[»] chr7 (10 HSPs)
chr7 (25-153)||(31403776-31403904)
chr7 (61-167)||(3897948-3898054)
chr7 (86-179)||(3884123-3884216)
chr7 (39-99)||(18221472-18221532)
chr7 (34-107)||(41147764-41147837)
chr7 (34-98)||(43970061-43970125)
chr7 (22-89)||(27745716-27745783)
chr7 (34-100)||(31802482-31802548)
chr7 (85-179)||(42304924-42305018)
chr7 (34-107)||(12350734-12350807)
[»] chr3 (5 HSPs)
chr3 (34-107)||(4741588-4741661)
chr3 (36-89)||(54548327-54548380)
chr3 (41-95)||(38475633-38475687)
chr3 (36-83)||(52964150-52964197)
chr3 (30-71)||(51140164-51140205)
[»] chr5 (5 HSPs)
chr5 (36-100)||(10813145-10813209)
chr5 (34-107)||(23151279-23151352)
chr5 (34-107)||(28499186-28499259)
chr5 (36-101)||(6292456-6292521)
chr5 (22-98)||(3722730-3722806)
[»] scaffold0027 (1 HSPs)
scaffold0027 (22-81)||(140408-140466)
[»] scaffold0024 (1 HSPs)
scaffold0024 (22-101)||(69040-69119)
[»] scaffold0996 (1 HSPs)
scaffold0996 (34-100)||(1546-1612)
[»] scaffold0067 (1 HSPs)
scaffold0067 (34-107)||(10982-11055)


Alignment Details
Target: chr1 (Bit Score: 303; Significance: 1e-170; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 22 - 388
Target Start/End: Original strand, 4048443 - 4048809
Alignment:
Q  22 acatcatcaaagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacataactaacaataaaat 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||||||||||||||||||||||    
T  4048443 acatcataaaagatatgggggctaggatgagataaagatgctctaactatagtgtgaacaactttatttgcttgcctcctgacataactaacaataaaat 4048542  T
Q  122 tattgcgagttgacaaaagattctgacatctactaatagtatctcctaattcattatggggaactgaagatgagtttactgcatctacaacaagcttgca 221  Q
    ||||||||||||||||||| | ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4048543 tattgcgagttgacaaaaggtcctgacatctactaattgtatctcctaattcattgtggggaactgaagatgagtttactgcatctacaacaagcttgca 4048642  T
Q  222 atcaaactaaaaaagaactgattgatagccatgtgtgatagcaatcttgattgcttctaacaaccccaatgcttcagcttcagtaggagaggaggaaaag 321  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  4048643 atcagactaaaaaagaactgattgatagccatgtgtgatagcaatcttgattgcttctaacagccccaatgctttagcttcagtaggagaggaggaaaag 4048742  T
Q  322 ggagcataatttgacattcctaacaagagctgatcggagaaatcatgaatgcagcagccataaccag 388  Q
    |||||||||||||||||||||||||| |||||| |||||||||||  ||||||||||||||||||||    
T  4048743 ggagcataatttgacattcctaacaatagctgaccggagaaatcacaaatgcagcagccataaccag 4048809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 43427491 - 43427401
Alignment:
Q  86 tatttgtttgcctcctgacataactaacaataaaattattgcgagttgacaaaagattctgacatctactaatagtatctcctaattcatt 176  Q
    |||||||||||||||||||||| || ||||||||||||||||||| |||||| ||||||| |||||||  |||| ||||||| || |||||    
T  43427491 tatttgtttgcctcctgacatagctcacaataaaattattgcgagatgacaatagattcttacatctagaaataatatctccaaactcatt 43427401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 28037726 - 28037679
Alignment:
Q  36 atgggggctaggatgagataaagatgctctagctatagtatgagcaac 83  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  28037726 atgggggctaggatgagataaagaagctctagctatactatgagcaac 28037679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 7386759 - 7386682
Alignment:
Q  22 acatcatcaaagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctc 99  Q
    ||||||| ||| | |||||||||||||| ||||||||| |||||||| ||  ||||||| |||||||||| |||||||    
T  7386759 acatcataaaaaacatgggggctaggattagataaagaggctctagcaatgctatgagctactttatttgcttgcctc 7386682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 39501212 - 39501135
Alignment:
Q  30 aaagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 107  Q
    |||||||||| ||||||| |||||||  ||||||||||| ||| ||| ||||||| |||||| ||||||||| |||||    
T  39501212 aaagatatggaggctagggtgagatagtgatgctctagcaatactataagcaactctatttgcttgcctcctaacata 39501135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 14651077 - 14651010
Alignment:
Q  30 aaagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcc 100  Q
    ||||||||||||||||||||||||||   |||||||||||||  |||| ||||| ||||||| ||||||||    
T  14651077 aaagatatgggggctaggatgagata---atgctctagctatgctatgtgcaaccttatttgcttgcctcc 14651010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 14660868 - 14660801
Alignment:
Q  30 aaagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcc 100  Q
    ||||||||||||||||||||||||||   |||||||||||||  |||| ||||| ||||||| ||||||||    
T  14660868 aaagatatgggggctaggatgagata---atgctctagctatgctatgtgcaaccttatttgcttgcctcc 14660801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 49508624 - 49508557
Alignment:
Q  34 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcct 101  Q
    |||||||||||||| || ||||| || |||||||||||  ||||||| || |||||||||||||||||    
T  49508624 atatgggggctagggtgggataaggaagctctagctatgttatgagctaccttatttgtttgcctcct 49508557  T

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Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 45432875 - 45432812
Alignment:
Q  38 gggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcct 101  Q
    |||||||||| || ||||| || |||||||||||  ||||||| || |||||||||||||||||    
T  45432875 gggggctagggtgggataaggaagctctagctatgttatgagctaccttatttgtttgcctcct 45432812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 33978180 - 33978246
Alignment:
Q  34 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcc 100  Q
    |||||||||||||||||| |||| || |||||||| ||| ||||||||||  |||| | ||||||||    
T  33978180 atatgggggctaggatgacataaggaagctctagcaatactatgagcaaccctattagcttgcctcc 33978246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 27643355 - 27643432
Alignment:
Q  22 acatcatcaaagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctc 99  Q
    ||||||| ||| | || ||| ||||| |||||||| ||||||||||| ||| |||||||||| ||||| | |||||||    
T  27643355 acatcattaaaaacatagggactagggtgagataaggatgctctagcaatactatgagcaaccttattagcttgcctc 27643432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 107
Target Start/End: Complemental strand, 38599090 - 38599037
Alignment:
Q  54 taaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 107  Q
    ||||||||||||||| ||| ||||||||||||||||   ||||||||| |||||    
T  38599090 taaagatgctctagcaatactatgagcaactttattatcttgcctcctaacata 38599037  T

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Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 37670695 - 37670780
Alignment:
Q  22 acatcatcaaagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 107  Q
    ||||||| ||| |||||||||||||| || ||||||||||||||||| ||| ||||| ||||||||||||||||||| || |||||    
T  37670695 acatcataaaaaatatgggggctagggtgggataaagatgctctagcaatactatgaacaactttatttgtttgccttctaacata 37670780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 4244454 - 4244397
Alignment:
Q  42 gctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctc 99  Q
    ||||||||||||||||||||||||||||||| |||||||| || |||||| |||||||    
T  4244454 gctaggatgagataaagatgctctagctatactatgagcagctctatttgcttgcctc 4244397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 8323530 - 8323595
Alignment:
Q  30 aaagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttg 95  Q
    ||||||||||||| ||||||||||||| |||||||||| |||  |||| |||||||||||||||||    
T  8323530 aaagatatgggggttaggatgagataaggatgctctagttatgctatgtgcaactttatttgtttg 8323595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 10748137 - 10748060
Alignment:
Q  30 aaagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 107  Q
    ||||||||| |||||||| |||||||  ||||||||||| ||| ||||||||||| |||||| ||||||||| |||||    
T  10748137 aaagatatgagggctagggtgagatagtgatgctctagcaatattatgagcaactctatttgcttgcctcctaacata 10748060  T

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Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 17247432 - 17247364
Alignment:
Q  85 ttatttgtttgcctcctgacataactaacaataaaattattgcgagttgacaaaagattctgacatcta 153  Q
    |||||||||||||| ||||||||| | ||||||||||||||||||| |||||| |||| || |||||||    
T  17247432 ttatttgtttgccttctgacataattcacaataaaattattgcgagatgacaatagatccttacatcta 17247364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 36756954 - 36757020
Alignment:
Q  34 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcc 100  Q
    ||||||||||||||||| ||||| || |||||||| ||| |||||||||||||||| | ||||||||    
T  36756954 atatgggggctaggatgtgataaggaagctctagcaatactatgagcaactttattagcttgcctcc 36757020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 33054927 - 33054866
Alignment:
Q  22 acatcatcaaagatatgggggctaggatgagataaagatgctctagctatagtatgagcaac 83  Q
    |||||||||||||||| ||||||||| |||||||  ||||||||||||||||  ||||||||    
T  33054927 acatcatcaaagatataggggctagggtgagatagggatgctctagctatagagtgagcaac 33054866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 43115106 - 43115039
Alignment:
Q  34 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcct 101  Q
    |||||||||||||| || ||||| || |||||||||||  ||||||| || |||||||||||||||||    
T  43115106 atatgggggctagggtgggataaggaagctctagctatgttatgagctaccttatttgtttgcctcct 43115039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 648596 - 648532
Alignment:
Q  37 tgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcct 101  Q
    ||||||||||| || |||||||| |||||||||||  ||||||| ||| |||||| |||||||||    
T  648596 tgggggctaggttgtgataaagaagctctagctatgctatgagccactctatttgcttgcctcct 648532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 30928294 - 30928232
Alignment:
Q  39 ggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcct 101  Q
    ||||| |||||||||||| |  |||||||| ||| |||||||||| |||||| ||||||||||    
T  30928294 ggggcgaggatgagataaggcggctctagcaatactatgagcaaccttatttatttgcctcct 30928232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 4017117 - 4017182
Alignment:
Q  36 atgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcct 101  Q
    |||||||||||| | |||||| |||||||| ||||| | ||||||||| | ||||| |||||||||    
T  4017117 atgggggctagggttagataaggatgctcttgctatggaatgagcaacctcatttgcttgcctcct 4017182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 24467378 - 24467313
Alignment:
Q  36 atgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcct 101  Q
    |||||||||||| | |||||| |||||||| ||||| | ||||||||| | ||||| |||||||||    
T  24467378 atgggggctagggttagataaggatgctcttgctatggaatgagcaacctcatttgcttgcctcct 24467313  T

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Target: chr8 (Bit Score: 46; Significance: 4e-17; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 9180724 - 9180801
Alignment:
Q  30 aaagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 107  Q
    |||||||||||||||||| |||||||  ||||||||||| ||| ||||||||||| |||||| ||||||||| |||||    
T  9180724 aaagatatgggggctagggtgagatagtgatgctctagcaatattatgagcaactctatttgcttgcctcctaacata 9180801  T

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Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 11629587 - 11629510
Alignment:
Q  30 aaagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 107  Q
    |||||||||||| ||||| |||||||| ||||||||||| ||| ||||||||||| |||||| ||||||||| |||||    
T  11629587 aaagatatggggcctagggtgagataatgatgctctagcaatactatgagcaactctatttgcttgcctcctaacata 11629510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 10394727 - 10394649
Alignment:
Q  22 acatcatcaaagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcc 100  Q
    ||||||| ||| |||| |||| ||||||||||||||||||| ||||| ||| |||||| ||| ||||||||||||||||    
T  10394727 acatcatgaaaaatataggggttaggatgagataaagatgcgctagcaatactatgagtaaccttatttgtttgcctcc 10394649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 34752683 - 34752760
Alignment:
Q  30 aaagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 107  Q
    |||||||||||||||||| |||||||  ||||||||||| ||| ||||||||| | |||||| ||||||||| |||||    
T  34752683 aaagatatgggggctagggtgagatagtgatgctctagcaatactatgagcaattctatttgcttgcctcctaacata 34752760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 5896301 - 5896377
Alignment:
Q  25 tcatcaaagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcct 101  Q
    |||| ||| ||||||||||||||||||||||| |  |||||||| ||| ||||||| ||| |||||  |||||||||    
T  5896301 tcatgaaaaatatgggggctaggatgagataaggcagctctagcaatactatgagctactatattttcttgcctcct 5896377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 153
Target Start/End: Original strand, 32229983 - 32230114
Alignment:
Q  22 acatcatcaaagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacataactaacaataaaat 121  Q
    ||||||| ||| |||||  ||||||| |||||||| || |||||||||||||| ||||| ||  |||||  || |||||  ||||  || ||||||||||    
T  32229983 acatcattaaaaatatgaaggctagggtgagataaggaagctctagctatagtgtgagcgaccctatttacttacctccgaacatgcctcacaataaaat 32230082  T
Q  122 tattgcgagttgacaaaagattctgacatcta 153  Q
    ||||||| | || ||| |||| || |||||||    
T  32230083 tattgcgggctgccaatagatccttacatcta 32230114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 16484140 - 16484217
Alignment:
Q  22 acatcatcaaagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctc 99  Q
    ||||||| ||| | || ||| ||||| |||||||| ||||||||||| ||| |||||||||| ||||| | |||||||    
T  16484140 acatcattaaaaacatagggactagggtgagataaggatgctctagcaatactatgagcaaccttattagcttgcctc 16484217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 35613689 - 35613624
Alignment:
Q  36 atgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcct 101  Q
    |||||||||||| | |||||| |||||||| ||||| | ||||||||| | ||||| |||||||||    
T  35613689 atgggggctagggttagataaggatgctcttgctatggaatgagcaacctcatttgcttgcctcct 35613624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 10158948 - 10159025
Alignment:
Q  30 aaagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 107  Q
    |||||||||||||||||| |||||||  ||||||||||| ||| ||||||||||| |||||| ||||||||| |||||    
T  10158948 aaagatatgggggctagggtgagatagtgatgctctagcaatattatgagcaactctatttgcttgcctcctaacata 10159025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 14453394 - 14453436
Alignment:
Q  30 aaagatatgggggctaggatgagataaagatgctctagctata 72  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  14453394 aaagatatgggggctaggatgagataaggatgctctagctata 14453436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 21729825 - 21729895
Alignment:
Q  30 aaagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcc 100  Q
    ||||||||||||||||||||||||||| |||| | |||||||  |||| ||||| ||||||| ||||||||    
T  21729825 aaagatatgggggctaggatgagataaggatgttgtagctatgctatgtgcaaccttatttggttgcctcc 21729895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 108
Target Start/End: Complemental strand, 25357718 - 25357649
Alignment:
Q  39 ggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacataa 108  Q
    ||||||||||||||||||  |  |||||||||   ||||||| || ||||||| ||||||||||||||||    
T  25357718 ggggctaggatgagataagaaaactctagctaagttatgagctaccttatttgcttgcctcctgacataa 25357649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 4e-17; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 42327896 - 42327973
Alignment:
Q  30 aaagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 107  Q
    |||||||||||||||||| |||||||  ||||||||||| ||| ||||||||||| |||||| ||||||||| |||||    
T  42327896 aaagatatgggggctagggtgagatagtgatgctctagcaatattatgagcaactctatttgcttgcctcctaacata 42327973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 145 - 346
Target Start/End: Complemental strand, 26021970 - 26021769
Alignment:
Q  145 tgacatctactaatagtatctcctaattcattatggggaactgaagatgagtttactgcatctacaacaagcttgcaatcaaactaaaaaagaactgatt 244  Q
    ||||| ||||||||| ||||||| | |||||| |||||||||   || || ||||| | ||| |||||||||||||| || |||| ||| | ||| |||     
T  26021970 tgacacctactaataatatctccaacttcattctggggaacttgtgaagaatttaccgtatcaacaacaagcttgcagtctaactcaaatataacagatg 26021871  T
Q  245 gatagccatgtgtgatagcaatcttgattgcttctaacaaccccaatgcttcagcttcagtaggagaggaggaaaagggagcataatttgacattcctaa 344  Q
    || | ||| ||   ||||||| ||| ||||||||||||||||||||| | || |||||||  ||| | ||||| |||| |||||| |  |||||||||||    
T  26021870 gaaaaccacgttcaatagcaagctttattgcttctaacaaccccaatccctcggcttcaggtggaaaagaggataaggaagcatagtcggacattcctaa 26021771  T
Q  345 ca 346  Q
    ||    
T  26021770 ca 26021769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 39956324 - 39956211
Alignment:
Q  45 aggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacataactaacaataaaattattgcgagttgacaaaagattc 144  Q
    |||||||||||| || | |||||||||| |||||  ||||||||||||||| || ||||||||||| ||||||||  ||||| ||| ||| || |||| |    
T  39956324 aggatgagataaggaggatctagctatattatgaataactttatttgtttgtcttctgacataactcacaataaaggtattgtgagatgataatagatcc 39956225  T
Q  145 tgacatctactaat 158  Q
    | ||||||| ||||    
T  39956224 ttacatctagtaat 39956211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 43734005 - 43733928
Alignment:
Q  22 acatcatcaaagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctc 99  Q
    ||||||| ||||||||||||||||||||||||||| |  |||||||| ||| ||||||| ||  |||||| |||||||    
T  43734005 acatcatgaaagatatgggggctaggatgagataaggcagctctagcaatactatgagctaccatatttgcttgcctc 43733928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 32499629 - 32499556
Alignment:
Q  34 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 107  Q
    ||||||||||||||||||||||  || |||| ||| ||| ||||||||||  |||||| ||||||||| |||||    
T  32499629 atatgggggctaggatgagatagcgaagctcgagcaatactatgagcaacactatttgcttgcctcctaacata 32499556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 42440985 - 42441038
Alignment:
Q  49 tgagataaagatgctctagctatagtatgagcaactttatttg-tttgcctcct 101  Q
    |||||||||||||||||||| | |||||||||||||||||| | ||||||||||    
T  42440985 tgagataaagatgctctagcaacagtatgagcaactttattagctttgcctcct 42441038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 5185480 - 5185527
Alignment:
Q  36 atgggggctaggatgagataaagatgctctagctatagtatgagcaac 83  Q
    |||||||||| |||||||||| || |||||||||||| ||||||||||    
T  5185480 atgggggctaagatgagataaggaagctctagctatactatgagcaac 5185527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 16431045 - 16430971
Alignment:
Q  39 ggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacataactaac 113  Q
    |||||||||||||||||| ||  ||| |||||   |||||||||| ||||||| ||||||||| |||| ||||||    
T  16431045 ggggctaggatgagataaggaacctcgagctaacatatgagcaaccttatttgcttgcctcctaacatgactaac 16430971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 54421407 - 54421473
Alignment:
Q  34 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcc 100  Q
    ||||||||||||||||| ||||| || |||||||| ||| ||||| |||| ||||| | ||||||||    
T  54421407 atatgggggctaggatgtgataaggaagctctagcaatactatgaccaaccttattagcttgcctcc 54421473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 23600141 - 23600205
Alignment:
Q  34 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcct 98  Q
    |||||||||||||  ||| |||  ||||||||||||||| |||||||||   |||||||||||||    
T  23600141 atatgggggctagtgtgatatagggatgctctagctatattatgagcaataatatttgtttgcct 23600205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 38761389 - 38761437
Alignment:
Q  41 ggctaggatgagataaagatgctctagctatagtatgagcaactttatt 89  Q
    ||||||| |||||||| ||||||||||| ||| |||||||||| |||||    
T  38761389 ggctagggtgagataaggatgctctagcaatactatgagcaaccttatt 38761437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 153
Target Start/End: Complemental strand, 31403904 - 31403776
Alignment:
Q  25 tcatcaaagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacataactaacaataaaattat 124  Q
    |||| ||| |||||| ||||||| ||||||||  | |||||||||||  ||||||| ||  |||||||||| ||||||||||| || |||||||||||||    
T  31403904 tcatgaaaaatatggaggctagggtgagataagaaagctctagctatgttatgagctaccctatttgtttgtctcctgacatagctcacaataaaattat 31403805  T
Q  125 tgcgagttgacaaaagattctgacatcta 153  Q
    || ||| ||| || |||| || |||||||    
T  31403804 tgtgagatgataatagatccttacatcta 31403776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 61 - 167
Target Start/End: Original strand, 3897948 - 3898054
Alignment:
Q  61 gctctagctatagtatgagcaactttatttgtttgcctcctgacataactaacaataaaattattgcgagttgacaaaagattctgacatctactaatag 160  Q
    |||||||||||  ||||||| || |||||| ||||||| ||||||| ||| ||||||||||||||  ||| |||||| |||| || |||||||  ||||     
T  3897948 gctctagctatgttatgagctaccttatttatttgccttctgacattactcacaataaaattattatgagatgacaatagatccttacatctataaataa 3898047  T
Q  161 tatctcc 167  Q
    |||||||    
T  3898048 tatctcc 3898054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 3884123 - 3884216
Alignment:
Q  86 tatttgtttgcctcctgacataactaacaataaaattattgcgagttgacaaaagattctgacatctactaatagtatctcctaattcattatg 179  Q
    |||||| ||| |||||||||| ||| ||||||||||||||| ||| |||||| |||| || |||||||  |||| ||||||| || ||||||||    
T  3884123 tatttgcttgtctcctgacattactcacaataaaattattgtgagatgacaatagatccttacatctagaaataatatctccgaactcattatg 3884216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 39 - 99
Target Start/End: Original strand, 18221472 - 18221532
Alignment:
Q  39 ggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctc 99  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||| ||||| | |||||||    
T  18221472 ggggctagggtgagataaggatgctctagcaatagtatgagcaaccttattagcttgcctc 18221532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 41147837 - 41147764
Alignment:
Q  34 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 107  Q
    ||||||||||||||||||||||  || |||| ||| ||| ||||||||||  |||||| ||||||||| |||||    
T  41147837 atatgggggctaggatgagatagcgaagctcgagcaatactatgagcaacactatttgcttgcctcctaacata 41147764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 43970125 - 43970061
Alignment:
Q  34 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcct 98  Q
    ||||||||||||||||  ||||| || |||||||| ||| |||||||||| ||||||| ||||||    
T  43970125 atatgggggctaggattggataaggacgctctagcaatactatgagcaaccttatttgcttgcct 43970061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 27745716 - 27745783
Alignment:
Q  22 acatcatcaaagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatt 89  Q
    ||||||| ||| | || ||||||||| |||||||| ||||||||||| ||| |||||||||| |||||    
T  27745716 acatcattaaaaacataggggctagggtgagataaggatgctctagcgatactatgagcaaccttatt 27745783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 31802548 - 31802482
Alignment:
Q  34 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcc 100  Q
    |||||| ||||||||||| |||| || |||||||| ||| |||||||||| ||||| | ||||||||    
T  31802548 atatggaggctaggatgacataaggaagctctagcaatactatgagcaaccttattagcttgcctcc 31802482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 42304924 - 42305018
Alignment:
Q  85 ttatttgtttgcctcctgacataactaacaataaaattattgcgagttgacaaaagattctgacatctactaatagtatctcctaattcattatg 179  Q
    ||||||||||||||||| ||||| || | ||||||||||||| ||| |||||| |||| |  |||||||  ||||  |||||| || ||||||||    
T  42304924 ttatttgtttgcctcctcacatagctcaaaataaaattattgtgagatgacaatagatccatacatctagaaataacatctccgaactcattatg 42305018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 12350734 - 12350807
Alignment:
Q  34 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 107  Q
    ||||||||| ||||||||||||  || |||| ||| ||| ||||||||||  |||||| ||||||||| |||||    
T  12350734 atatgggggataggatgagatagcgaagctcgagcaatactatgagcaacaatatttgcttgcctcctaacata 12350807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 4741588 - 4741661
Alignment:
Q  34 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 107  Q
    |||||||||||||| |  ||||||||||||||||| ||| |||||||||||||||| |  |||||||| |||||    
T  4741588 atatgggggctagggttggataaagatgctctagcaatactatgagcaactttattagcgtgcctcctaacata 4741661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 54548327 - 54548380
Alignment:
Q  36 atgggggctaggatgagataaagatgctctagctatagtatgagcaactttatt 89  Q
    ||||||||||||||||||||| || |||||||||||| ||||||||||| ||||    
T  54548327 atgggggctaggatgagataaggaagctctagctatactatgagcaactctatt 54548380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 38475687 - 38475633
Alignment:
Q  41 ggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttg 95  Q
    ||||||| |||||||| |||||||||| |||| |||| |||||||||||||||||    
T  38475687 ggctagggtgagataaggatgctctagttatactatgtgcaactttatttgtttg 38475633  T

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Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 52964150 - 52964197
Alignment:
Q  36 atgggggctaggatgagataaagatgctctagctatagtatgagcaac 83  Q
    ||||||||||||||||||||| || | |||||||||| ||||||||||    
T  52964150 atgggggctaggatgagataaggaagatctagctatactatgagcaac 52964197  T

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Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 51140164 - 51140205
Alignment:
Q  30 aaagatatgggggctaggatgagataaagatgctctagctat 71  Q
    |||||||||||||||||||||  |||| ||||||||||||||    
T  51140164 aaagatatgggggctaggatggcataaggatgctctagctat 51140205  T

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Target: chr5 (Bit Score: 37; Significance: 0.000000000009; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 10813145 - 10813209
Alignment:
Q  36 atgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcc 100  Q
    ||||||||||||||||||||| || |||||||||||| ||||||||||  |||| | ||||||||    
T  10813145 atgggggctaggatgagataaggaagctctagctatactatgagcaaccctattagcttgcctcc 10813209  T

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Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 23151352 - 23151279
Alignment:
Q  34 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 107  Q
    ||||||||||||||||||||||  || |||| ||| ||| ||||||||||  |||||| ||||||||| |||||    
T  23151352 atatgggggctaggatgagatagcgaagctcgagcaatactatgagcaacactatttgcttgcctcctaacata 23151279  T

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Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 28499259 - 28499186
Alignment:
Q  34 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 107  Q
    ||||||||||||||||||||||  || |||| ||| ||| ||||||||||  |||||| ||||||||| |||||    
T  28499259 atatgggggctaggatgagatagcgaagctcgagcaatactatgagcaacactatttgcttgcctcctaacata 28499186  T

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Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 6292456 - 6292521
Alignment:
Q  36 atgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcct 101  Q
    |||||||||||| | |||||| |||||||| ||||| | ||||||||| | ||||| |||||||||    
T  6292456 atgggggctagggttagataaggatgctcttgctatggaatgagcaacctcatttgcttgcctcct 6292521  T

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Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 3722806 - 3722730
Alignment:
Q  22 acatcatcaaagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcct 98  Q
    ||||||||||| ||||  ||||||   ||||||| |||||||||||||||||  ||||||||  |||||| ||||||    
T  3722806 acatcatcaaatatatatgggctaacgtgagatagagatgctctagctatagagtgagcaaccatatttgcttgcct 3722730  T

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Target: scaffold0027 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 140408 - 140466
Alignment:
Q  22 acatcatcaaagatatgggggctaggatgagataaagatgctctagctatagtatgagca 81  Q
    ||||||| ||||| |||||||||||||||||||||| | |||||| ||||| ||||||||    
T  140408 acatcataaaagacatgggggctaggatgagataaa-aggctctatctatactatgagca 140466  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 69040 - 69119
Alignment:
Q  22 acatcatcaaagatatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcct 101  Q
    ||||||| ||| |||||| ||||| | ||  ||||||| |||||||| ||| |||||||||||||||||| ||| |||||    
T  69040 acatcataaaaaatatggaggctatggtggaataaagacgctctagcgatactatgagcaactttatttgcttgtctcct 69119  T

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Target: scaffold0996 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0996
Description:

Target: scaffold0996; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 1546 - 1612
Alignment:
Q  34 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcc 100  Q
    |||||||||||||||||| |||| || |||||||| ||| ||||||||||  |||| | ||||||||    
T  1546 atatgggggctaggatgacataaggaagctctagcaatactatgagcaaccctattagcttgcctcc 1612  T

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Target: scaffold0067 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 10982 - 11055
Alignment:
Q  34 atatgggggctaggatgagataaagatgctctagctatagtatgagcaactttatttgtttgcctcctgacata 107  Q
    ||||||||||||||||||||||  || |||| ||| ||| || |||||||  |||||| ||||||||| |||||    
T  10982 atatgggggctaggatgagatagcgaagctcgagcaatactacgagcaacactatttgcttgcctcctaacata 11055  T

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