View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21695_high_2 (Length: 384)

Name: NF21695_high_2
Description: NF21695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21695_high_2
NF21695_high_2
[»] chr3 (38 HSPs)
chr3 (207-384)||(14764447-14764624)
chr3 (207-384)||(3802220-3802397)
chr3 (207-384)||(23372195-23372372)
chr3 (207-384)||(51299783-51299960)
chr3 (207-384)||(12304424-12304609)
chr3 (272-384)||(20249455-20249567)
chr3 (207-302)||(54519847-54519942)
chr3 (207-300)||(9532508-9532601)
chr3 (272-384)||(29545471-29545583)
chr3 (287-384)||(9532612-9532709)
chr3 (272-384)||(38312468-38312580)
chr3 (209-267)||(18899719-18899777)
chr3 (209-270)||(20249665-20249726)
chr3 (209-265)||(10834711-10834767)
chr3 (212-279)||(17548768-17548835)
chr3 (209-279)||(1989791-1989861)
chr3 (209-279)||(38312643-38312713)
chr3 (209-270)||(29545683-29545744)
chr3 (212-279)||(13026887-13026954)
chr3 (212-279)||(34853095-34853162)
chr3 (272-326)||(18888834-18888888)
chr3 (262-326)||(18899863-18899927)
chr3 (209-270)||(180069-180130)
chr3 (209-264)||(23396572-23396627)
chr3 (339-384)||(11306058-11306103)
chr3 (212-270)||(18958287-18958345)
chr3 (210-268)||(54972689-54972747)
chr3 (210-268)||(54975299-54975357)
chr3 (210-268)||(54977909-54977967)
chr3 (339-384)||(2270548-2270593)
chr3 (339-384)||(12356288-12356333)
chr3 (339-384)||(12362837-12362882)
chr3 (339-383)||(18130127-18130171)
chr3 (339-383)||(18136603-18136647)
chr3 (209-268)||(55292996-55293055)
chr3 (340-382)||(19443324-19443366)
chr3 (341-382)||(11965184-11965225)
chr3 (339-384)||(12202170-12202215)
[»] chr5 (31 HSPs)
chr5 (207-384)||(41878303-41878480)
chr5 (207-384)||(23113054-23113231)
chr5 (207-384)||(38146070-38146247)
chr5 (210-384)||(22339331-22339505)
chr5 (210-384)||(22335793-22335967)
chr5 (267-384)||(22749494-22749611)
chr5 (272-384)||(28371744-28371856)
chr5 (267-384)||(9775210-9775327)
chr5 (272-384)||(37599612-37599724)
chr5 (272-384)||(42959828-42959940)
chr5 (272-384)||(19510776-19510888)
chr5 (207-280)||(9775101-9775174)
chr5 (209-279)||(19510664-19510734)
chr5 (209-270)||(22469508-22469569)
chr5 (212-279)||(10816060-10816127)
chr5 (212-279)||(23538059-23538126)
chr5 (209-279)||(22358456-22358526)
chr5 (209-279)||(22749363-22749433)
chr5 (209-279)||(24277902-24277972)
chr5 (209-279)||(24384241-24384311)
chr5 (209-270)||(42959717-42959778)
chr5 (209-267)||(37599777-37599835)
chr5 (339-384)||(22232922-22232967)
chr5 (210-268)||(29325941-29325999)
chr5 (270-325)||(10034977-10035032)
chr5 (209-268)||(43120581-43120640)
chr5 (209-268)||(43124114-43124173)
chr5 (340-382)||(6728542-6728584)
chr5 (340-382)||(22008206-22008248)
chr5 (278-326)||(21888417-21888465)
chr5 (340-384)||(34828841-34828885)
[»] chr2 (29 HSPs)
chr2 (210-384)||(19663143-19663317)
chr2 (207-384)||(20260507-20260684)
chr2 (207-384)||(10685941-10686118)
chr2 (210-384)||(6261865-6262039)
chr2 (272-384)||(9241079-9241191)
chr2 (272-384)||(6482098-6482210)
chr2 (272-384)||(6485565-6485677)
chr2 (212-279)||(26895971-26896038)
chr2 (209-279)||(6481986-6482056)
chr2 (209-279)||(6485453-6485523)
chr2 (212-279)||(6478596-6478663)
chr2 (209-279)||(9240919-9240989)
chr2 (267-326)||(21074235-21074294)
chr2 (212-279)||(22702738-22702805)
chr2 (209-279)||(23374666-23374736)
chr2 (214-279)||(10040507-10040572)
chr2 (224-270)||(19803523-19803569)
chr2 (287-329)||(29753004-29753046)
chr2 (339-384)||(23290778-23290823)
chr2 (225-270)||(24275940-24275985)
chr2 (212-270)||(22109202-22109260)
chr2 (339-384)||(22796959-22797004)
chr2 (209-268)||(31502927-31502986)
chr2 (209-268)||(31505493-31505552)
chr2 (346-382)||(20723893-20723929)
chr2 (278-326)||(20914594-20914642)
chr2 (346-382)||(22809742-22809778)
chr2 (287-323)||(23148437-23148473)
chr2 (287-323)||(23560227-23560263)
[»] chr7 (52 HSPs)
chr7 (207-384)||(29795413-29795590)
chr7 (207-384)||(29799232-29799409)
chr7 (207-384)||(18871547-18871724)
chr7 (209-384)||(146752-146927)
chr7 (272-384)||(15166520-15166632)
chr7 (272-384)||(16007830-16007942)
chr7 (267-384)||(23666144-23666261)
chr7 (274-383)||(10897501-10897610)
chr7 (272-384)||(14421101-14421212)
chr7 (272-384)||(14565456-14565568)
chr7 (267-381)||(11302596-11302710)
chr7 (207-279)||(18606588-18606660)
chr7 (207-280)||(23666297-23666370)
chr7 (209-279)||(11660569-11660639)
chr7 (209-279)||(13255217-13255287)
chr7 (207-279)||(14565338-14565410)
chr7 (209-279)||(14420989-14421059)
chr7 (212-279)||(16109729-16109796)
chr7 (212-279)||(29003578-29003645)
chr7 (212-279)||(34956892-34956959)
chr7 (212-279)||(48742929-48742996)
chr7 (209-279)||(11302465-11302535)
chr7 (209-270)||(10897662-10897723)
chr7 (210-279)||(16572857-16572926)
chr7 (210-279)||(16592736-16592805)
chr7 (212-279)||(833753-833820)
chr7 (212-279)||(1198933-1199000)
chr7 (267-326)||(18606729-18606788)
chr7 (209-279)||(15166408-15166478)
chr7 (211-279)||(13850332-13850400)
chr7 (219-270)||(16007681-16007732)
chr7 (212-270)||(837791-837849)
chr7 (212-270)||(1202971-1203029)
chr7 (317-381)||(16109355-16109419)
chr7 (317-384)||(837227-837294)
chr7 (317-384)||(1202407-1202474)
chr7 (317-384)||(833231-833298)
chr7 (317-384)||(1198411-1198478)
chr7 (339-384)||(3290065-3290110)
chr7 (209-268)||(35365639-35365698)
chr7 (210-268)||(4992853-4992911)
chr7 (210-268)||(16005682-16005740)
chr7 (209-270)||(14189719-14189780)
chr7 (209-270)||(14192474-14192535)
chr7 (340-381)||(14946125-14946166)
chr7 (340-381)||(15373718-15373759)
chr7 (279-326)||(13678156-13678204)
chr7 (209-268)||(8775664-8775723)
chr7 (209-268)||(21744005-21744064)
chr7 (339-384)||(15437902-15437947)
chr7 (278-323)||(16668811-16668856)
chr7 (278-327)||(45185326-45185375)
[»] chr4 (36 HSPs)
chr4 (207-384)||(15533469-15533646)
chr4 (207-384)||(36037202-36037379)
chr4 (207-302)||(49548816-49548911)
chr4 (209-279)||(18211877-18211947)
chr4 (209-279)||(24048106-24048176)
chr4 (209-270)||(15989484-15989545)
chr4 (212-279)||(4831994-4832061)
chr4 (212-279)||(4835289-4835356)
chr4 (212-279)||(14047474-14047541)
chr4 (212-279)||(30146038-30146105)
chr4 (317-384)||(30146601-30146668)
chr4 (317-384)||(14047854-14047921)
chr4 (279-326)||(18212014-18212061)
chr4 (209-265)||(33685124-33685180)
chr4 (209-264)||(20900137-20900192)
chr4 (209-264)||(27027292-27027347)
chr4 (339-384)||(2585452-2585497)
chr4 (209-270)||(3336815-3336876)
chr4 (212-270)||(4828705-4828766)
chr4 (340-382)||(16221083-16221125)
chr4 (209-243)||(17142574-17142608)
chr4 (340-382)||(41529367-41529409)
chr4 (213-270)||(13877452-13877509)
chr4 (209-270)||(13881147-13881208)
chr4 (209-268)||(4170366-4170425)
chr4 (209-268)||(14698091-14698150)
chr4 (212-267)||(28916798-28916853)
chr4 (209-268)||(31131995-31132054)
chr4 (339-382)||(40908435-40908478)
chr4 (209-268)||(41791042-41791101)
chr4 (209-268)||(43258613-43258672)
chr4 (340-382)||(16156477-16156519)
chr4 (339-383)||(14556368-14556412)
chr4 (346-382)||(15324736-15324772)
chr4 (346-382)||(26077993-26078029)
chr4 (212-272)||(28382271-28382331)
[»] chr6 (24 HSPs)
chr6 (207-384)||(4476046-4476223)
chr6 (207-384)||(12941471-12941660)
chr6 (267-384)||(28290523-28290640)
chr6 (209-268)||(24266445-24266504)
chr6 (209-279)||(221392-221462)
chr6 (209-267)||(23351758-23351816)
chr6 (212-279)||(29848909-29848976)
chr6 (209-279)||(13763617-13763687)
chr6 (209-279)||(28290701-28290771)
chr6 (212-279)||(16133862-16133929)
chr6 (212-279)||(29417306-29417373)
chr6 (212-279)||(19444538-19444605)
chr6 (340-384)||(14582137-14582181)
chr6 (340-382)||(14616553-14616595)
chr6 (212-270)||(23621625-23621683)
chr6 (279-328)||(25395873-25395922)
chr6 (209-268)||(2288561-2288620)
chr6 (212-270)||(8717439-8717496)
chr6 (339-384)||(17413840-17413885)
chr6 (285-322)||(22346441-22346478)
chr6 (346-382)||(8760715-8760751)
chr6 (346-382)||(14724222-14724258)
chr6 (209-277)||(15538629-15538697)
chr6 (278-322)||(25749581-25749625)
[»] scaffold0544 (1 HSPs)
scaffold0544 (207-384)||(3168-3345)
[»] scaffold0026 (2 HSPs)
scaffold0026 (267-384)||(109934-110051)
scaffold0026 (209-279)||(109803-109873)
[»] scaffold0124 (2 HSPs)
scaffold0124 (272-384)||(37136-37248)
scaffold0124 (209-279)||(37383-37453)
[»] chr8 (29 HSPs)
chr8 (272-384)||(8729331-8729443)
chr8 (267-384)||(27942492-27942609)
chr8 (272-384)||(44476013-44476125)
chr8 (272-384)||(44479275-44479387)
chr8 (209-279)||(20453899-20453969)
chr8 (209-279)||(21862045-21862115)
chr8 (209-267)||(44475901-44475959)
chr8 (209-267)||(44479163-44479221)
chr8 (209-270)||(8729469-8729530)
chr8 (209-267)||(20459521-20459579)
chr8 (209-279)||(43111685-43111755)
chr8 (209-270)||(44431311-44431372)
chr8 (209-267)||(32949394-32949452)
chr8 (209-270)||(19881557-19881618)
chr8 (219-279)||(38186330-38186390)
chr8 (209-268)||(28853317-28853376)
chr8 (340-382)||(21322543-21322585)
chr8 (340-382)||(21327131-21327173)
chr8 (209-266)||(365349-365406)
chr8 (339-384)||(19988476-19988521)
chr8 (339-384)||(21300461-21300506)
chr8 (209-268)||(6608941-6609000)
chr8 (209-268)||(7301840-7301899)
chr8 (211-270)||(15005088-15005147)
chr8 (209-268)||(45135627-45135686)
chr8 (212-270)||(24708418-24708476)
chr8 (346-382)||(20974311-20974347)
chr8 (346-382)||(22176183-22176219)
chr8 (346-382)||(41009740-41009776)
[»] chr1 (30 HSPs)
chr1 (272-384)||(16371283-16371395)
chr1 (272-384)||(20438850-20438962)
chr1 (209-279)||(19209253-19209323)
chr1 (209-279)||(28311850-28311920)
chr1 (212-279)||(13529104-13529171)
chr1 (209-268)||(16371127-16371186)
chr1 (209-270)||(20439012-20439073)
chr1 (212-279)||(29534179-29534246)
chr1 (317-384)||(29534763-29534830)
chr1 (317-384)||(32649926-32649993)
chr1 (212-279)||(32649529-32649596)
chr1 (209-279)||(16400393-16400463)
chr1 (209-270)||(28204955-28205016)
chr1 (209-264)||(18251856-18251911)
chr1 (209-264)||(18269859-18269914)
chr1 (209-264)||(18274537-18274592)
chr1 (209-268)||(20578831-20578890)
chr1 (209-268)||(20586524-20586583)
chr1 (209-264)||(20900680-20900735)
chr1 (340-382)||(20824634-20824676)
chr1 (212-270)||(21181812-21181870)
chr1 (209-258)||(16397625-16397674)
chr1 (209-268)||(293531-293590)
chr1 (341-384)||(16883827-16883870)
chr1 (340-382)||(19778742-19778784)
chr1 (340-382)||(20838453-20838495)
chr1 (210-268)||(45306662-45306720)
chr1 (339-384)||(11141292-11141337)
chr1 (339-384)||(19667021-19667066)
chr1 (339-384)||(20942143-20942188)
[»] scaffold1427 (1 HSPs)
scaffold1427 (207-302)||(429-524)
[»] scaffold0337 (2 HSPs)
scaffold0337 (209-279)||(10581-10651)
scaffold0337 (278-326)||(10512-10560)
[»] scaffold0216 (1 HSPs)
scaffold0216 (209-279)||(20968-21038)
[»] scaffold0607 (1 HSPs)
scaffold0607 (209-279)||(2406-2476)
[»] scaffold0338 (1 HSPs)
scaffold0338 (209-270)||(4428-4489)
[»] scaffold0012 (1 HSPs)
scaffold0012 (209-269)||(223874-223934)
[»] scaffold0117 (1 HSPs)
scaffold0117 (212-270)||(41535-41593)
[»] scaffold0021 (1 HSPs)
scaffold0021 (212-270)||(145780-145838)
[»] scaffold0188 (1 HSPs)
scaffold0188 (212-267)||(887-942)
[»] scaffold0089 (2 HSPs)
scaffold0089 (209-263)||(1558-1612)
scaffold0089 (267-326)||(1758-1817)
[»] scaffold0447 (1 HSPs)
scaffold0447 (214-279)||(13666-13731)
[»] scaffold0383 (1 HSPs)
scaffold0383 (214-279)||(11661-11726)
[»] scaffold0042 (1 HSPs)
scaffold0042 (209-270)||(50454-50515)
[»] scaffold0825 (1 HSPs)
scaffold0825 (209-279)||(2138-2208)
[»] scaffold0003 (1 HSPs)
scaffold0003 (209-279)||(137279-137349)
[»] scaffold0034 (1 HSPs)
scaffold0034 (209-270)||(35262-35323)
[»] scaffold0970 (1 HSPs)
scaffold0970 (212-260)||(3752-3800)
[»] scaffold0635 (1 HSPs)
scaffold0635 (214-279)||(6498-6563)
[»] scaffold0139 (1 HSPs)
scaffold0139 (279-326)||(16301-16348)
[»] scaffold0004 (2 HSPs)
scaffold0004 (224-270)||(59012-59058)
scaffold0004 (340-382)||(320915-320957)
[»] scaffold0243 (1 HSPs)
scaffold0243 (339-384)||(8315-8360)
[»] scaffold0001 (1 HSPs)
scaffold0001 (339-384)||(95694-95739)
[»] scaffold0413 (1 HSPs)
scaffold0413 (232-279)||(10316-10363)
[»] scaffold0151 (1 HSPs)
scaffold0151 (212-270)||(1753-1811)
[»] scaffold0126 (1 HSPs)
scaffold0126 (340-382)||(38195-38237)
[»] scaffold0072 (1 HSPs)
scaffold0072 (340-382)||(55762-55804)
[»] scaffold0011 (3 HSPs)
scaffold0011 (340-382)||(258345-258387)
scaffold0011 (339-384)||(146852-146897)
scaffold0011 (339-384)||(197725-197770)
[»] scaffold0556 (2 HSPs)
scaffold0556 (339-384)||(5246-5291)
scaffold0556 (209-267)||(9162-9220)
[»] scaffold0500 (1 HSPs)
scaffold0500 (209-270)||(12075-12136)
[»] scaffold0381 (1 HSPs)
scaffold0381 (209-270)||(14334-14395)
[»] scaffold0278 (1 HSPs)
scaffold0278 (209-270)||(22511-22572)
[»] scaffold0192 (1 HSPs)
scaffold0192 (339-384)||(6441-6486)
[»] scaffold0169 (1 HSPs)
scaffold0169 (279-328)||(5800-5849)
[»] scaffold0106 (2 HSPs)
scaffold0106 (339-384)||(47044-47089)
scaffold0106 (339-384)||(51317-51362)
[»] scaffold0094 (1 HSPs)
scaffold0094 (279-328)||(51004-51053)
[»] scaffold0066 (1 HSPs)
scaffold0066 (212-265)||(47934-47987)
[»] scaffold0058 (1 HSPs)
scaffold0058 (209-270)||(40663-40724)
[»] scaffold0022 (2 HSPs)
scaffold0022 (339-384)||(38984-39029)
scaffold0022 (339-384)||(137044-137089)
[»] scaffold0317 (1 HSPs)
scaffold0317 (279-326)||(49-97)
[»] scaffold0077 (2 HSPs)
scaffold0077 (340-384)||(24077-24121)
scaffold0077 (339-384)||(18451-18496)
[»] scaffold0610 (1 HSPs)
scaffold0610 (339-382)||(5361-5404)
[»] scaffold0525 (1 HSPs)
scaffold0525 (209-264)||(11546-11601)
[»] scaffold0407 (1 HSPs)
scaffold0407 (339-382)||(4648-4691)
[»] scaffold0141 (1 HSPs)
scaffold0141 (209-268)||(32531-32590)
[»] scaffold0107 (1 HSPs)
scaffold0107 (209-268)||(2524-2583)
[»] scaffold0049 (1 HSPs)
scaffold0049 (209-268)||(82222-82281)
[»] scaffold0044 (1 HSPs)
scaffold0044 (209-268)||(6376-6435)
[»] scaffold0506 (1 HSPs)
scaffold0506 (340-382)||(8265-8307)
[»] scaffold0309 (1 HSPs)
scaffold0309 (340-382)||(20650-20692)
[»] scaffold0167 (1 HSPs)
scaffold0167 (322-376)||(19623-19677)
[»] scaffold0102 (1 HSPs)
scaffold0102 (285-327)||(44458-44500)
[»] scaffold0074 (1 HSPs)
scaffold0074 (346-384)||(16794-16832)
[»] scaffold0008 (1 HSPs)
scaffold0008 (340-382)||(29398-29440)
[»] scaffold1290 (1 HSPs)
scaffold1290 (278-327)||(1527-1576)
[»] scaffold0574 (1 HSPs)
scaffold0574 (338-382)||(6190-6235)
[»] scaffold0348 (1 HSPs)
scaffold0348 (339-384)||(2012-2057)
[»] scaffold0061 (1 HSPs)
scaffold0061 (339-384)||(57519-57564)
[»] scaffold0020 (1 HSPs)
scaffold0020 (278-323)||(177752-177797)
[»] scaffold0017 (1 HSPs)
scaffold0017 (339-384)||(141069-141114)
[»] scaffold0326 (1 HSPs)
scaffold0326 (278-326)||(5673-5721)
[»] scaffold0301 (1 HSPs)
scaffold0301 (346-382)||(13700-13736)
[»] scaffold0244 (2 HSPs)
scaffold0244 (278-326)||(9394-9442)
scaffold0244 (278-326)||(13467-13515)
[»] scaffold0097 (1 HSPs)
scaffold0097 (346-382)||(27722-27758)
[»] scaffold0025 (1 HSPs)
scaffold0025 (346-382)||(70944-70980)


Alignment Details
Target: chr3 (Bit Score: 170; Significance: 4e-91; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 207 - 384
Target Start/End: Complemental strand, 14764624 - 14764447
Alignment:
Q  207 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcata 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14764624 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcata 14764525  T
Q  307 atcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  14764524 atcaacaatatcatcaataatagatatctaactcatcaattaaatctatcaccctgtcataataataattcatcaata 14764447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 207 - 384
Target Start/End: Original strand, 3802220 - 3802397
Alignment:
Q  207 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcata 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  3802220 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattacctaatatatgtatatatttcata 3802319  T
Q  307 atcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    ||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  3802320 atcaacaatatcatcaataatagatttctaactcatcaattaaatctatcaccctgtcataataataattcatcaata 3802397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 207 - 384
Target Start/End: Complemental strand, 23372372 - 23372195
Alignment:
Q  207 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcata 306  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23372372 ttaacaataatgttcttacttcttaatctttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcata 23372273  T
Q  307 atcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||||||||||||||||| ||| |||||| |||||  |||||||||||  ||||||||||||||||    
T  23372272 atcaacaatatcatcaataatagatatctaactcttcaatttaatcttacaccctgtcatcgtaataattcatcaata 23372195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 207 - 384
Target Start/End: Original strand, 51299783 - 51299960
Alignment:
Q  207 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcata 306  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51299783 ttaacaataatgttcttacttcttaatctttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcata 51299882  T
Q  307 atcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||||||||||||||||| ||| |||||| |||||  |||||||||||  ||||||||||||||||    
T  51299883 atcaacaatatcatcaataatagatatctaactcttcaatttaatcttacaccctgtcatcgtaataattcatcaata 51299960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 207 - 384
Target Start/End: Original strand, 12304424 - 12304609
Alignment:
Q  207 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatcca--------atatatgtatat 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||| |||||    
T  12304424 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatatatatatatatat 12304523  T
Q  299 atttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  12304524 atttcataatcaacaatatcatcaataataaatatctaactcatcaattaaatctatcaccctgtcataataataattcatcaata 12304609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 272 - 384
Target Start/End: Complemental strand, 20249567 - 20249455
Alignment:
Q  272 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataa 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||| ||||||||||||||||    
T  20249567 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctaattcatcaattaaatctaacaccctgtcataataa 20249468  T
Q  372 taattcatcaata 384  Q
    |||||||||||||    
T  20249467 taattcatcaata 20249455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 207 - 302
Target Start/End: Original strand, 54519847 - 54519942
Alignment:
Q  207 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatattt 302  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54519847 ttaacaataatgttcttacttctttacctttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatattt 54519942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 207 - 300
Target Start/End: Original strand, 9532508 - 9532601
Alignment:
Q  207 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatat 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9532508 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatatatatat 9532601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 272 - 384
Target Start/End: Complemental strand, 29545583 - 29545471
Alignment:
Q  272 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataa 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||| ||||||||||||||||    
T  29545583 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctaattcatcaattaaatctaacaccctgtcataataa 29545484  T
Q  372 taattcatcaata 384  Q
    | |||| ||||||    
T  29545483 tgattcgtcaata 29545471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 287 - 384
Target Start/End: Original strand, 9532612 - 9532709
Alignment:
Q  287 atatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||| || |||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  9532612 atatatgtatatatctcttaatcaacaatatcatcaataataaatatctaactcatcaattaaatctatcaccctgtcataataataattcatcaata 9532709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 272 - 384
Target Start/End: Complemental strand, 38312580 - 38312468
Alignment:
Q  272 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataa 371  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||| |||||| |||| |||||||||||    
T  38312580 aactacaattatttaatatatgtatatatttcataatcaacaatatcatcattaatagatatctaattcatcaattaaatctaacaccttgtcataataa 38312481  T
Q  372 taattcatcaata 384  Q
    ||| |||||||||    
T  38312480 taactcatcaata 38312468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 18899719 - 18899777
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacga 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18899719 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacga 18899777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 20249726 - 20249665
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20249726 aacaataatgttcttacttctttaactttagtaacacttgctaattcaaccaacaacgacga 20249665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 10834767 - 10834711
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaac 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10834767 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaac 10834711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 212 - 279
Target Start/End: Complemental strand, 17548835 - 17548768
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  17548835 aataatgttcctacttctttaactttagtaacacttactaattcaaccaacaacgacgacaacaacaa 17548768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 279
Target Start/End: Complemental strand, 1989861 - 1989791
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||    
T  1989861 aacaataatattcttacttctttaactttattaacacttactaattcaaccaacaacgacgacaacaacaa 1989791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 279
Target Start/End: Complemental strand, 38312713 - 38312643
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||| ||||    
T  38312713 aacaataatgttcttacttctttaactttagtaacacttgttaattcaaccaacaacgacgacaacaacaa 38312643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 29545744 - 29545683
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  29545744 aacaataatgttcttacttctttaactttagtaacacttgctaattcaaccagcaacgacga 29545683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 279
Target Start/End: Complemental strand, 13026954 - 13026887
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||    
T  13026954 aataatattcttacttctttaactttagtaacacttactaattcaaccaacaaagacgacaacgacaa 13026887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 279
Target Start/End: Complemental strand, 34853162 - 34853095
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||    
T  34853162 aataatattcttacttctttaattttagtaacacttactaattcaaccaacaacgacgacaacaacaa 34853095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 272 - 326
Target Start/End: Original strand, 18888834 - 18888888
Alignment:
Q  272 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataa 326  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18888834 aactacaattatccaatatatgtatatatttcataatcaacaacatcatcaataa 18888888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 262 - 326
Target Start/End: Original strand, 18899863 - 18899927
Alignment:
Q  262 caacgacgataactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataa 326  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  18899863 caacaacgacaactacaattatccaatatatgtatatatttcataatcaacaacatgatcaataa 18899927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 180130 - 180069
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    |||||||||||||  ||||||| | ||||| |||||||||||||||||||||||||||||||    
T  180130 aacaataatgttcacacttcttcagctttaataacacttactaattcaaccaacaacgacga 180069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 23396627 - 23396572
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaa 264  Q
    ||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||||    
T  23396627 aacaataatgttcatacttcttcaactttaataacacttattaattcaaccaacaa 23396572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 11306103 - 11306058
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||    
T  11306103 tcatcaattgaatctaacaccctgacataataataattcatcaata 11306058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 270
Target Start/End: Original strand, 18958287 - 18958345
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    |||||| ||| |||||||| || |||| |||||||||||||||||||||||||| ||||    
T  18958287 aataatattcatacttcttcaattttaataacacttactaattcaaccaacaacaacga 18958345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 268
Target Start/End: Original strand, 54972689 - 54972747
Alignment:
Q  210 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    |||||||| ||| |||||||| ||||||| |||| |||||||| |||||||||||||||    
T  54972689 acaataatattcatacttcttcaactttaataactcttactaaatcaaccaacaacgac 54972747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 268
Target Start/End: Original strand, 54975299 - 54975357
Alignment:
Q  210 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    |||||||| ||| |||||||| ||||||| |||| |||||||| |||||||||||||||    
T  54975299 acaataatattcatacttcttcaactttaataactcttactaaatcaaccaacaacgac 54975357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 268
Target Start/End: Original strand, 54977909 - 54977967
Alignment:
Q  210 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    |||||||| ||| |||||||| ||||||| |||| |||||||| |||||||||||||||    
T  54977909 acaataatattcatacttcttcaactttaataactcttactaaatcaaccaacaacgac 54977967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 2270593 - 2270548
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||    
T  2270593 tcatcaattgaatctaacaccctaacataataataattcatcaata 2270548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 12356333 - 12356288
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||    
T  12356333 tcatcaattgaatctaacaccctaacataataataattcatcaata 12356288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 12362882 - 12362837
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||    
T  12362882 tcatcaattgaatctaacaccctaacataataataattcatcaata 12362837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 339 - 383
Target Start/End: Complemental strand, 18130171 - 18130127
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaat 383  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||    
T  18130171 tcatcaattgaatctaacaccctaacataataataattcatcaat 18130127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 339 - 383
Target Start/End: Complemental strand, 18136647 - 18136603
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaat 383  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||    
T  18136647 tcatcaattgaatctaacaccctaacataataataattcatcaat 18136603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 55293055 - 55292996
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    ||||||||| ||| |||||||| | |||||| |||||||||||| ||||||||| |||||    
T  55293055 aacaataatattcatacttcttcatctttagaaacacttactaaatcaaccaacgacgac 55292996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 340 - 382
Target Start/End: Original strand, 19443324 - 19443366
Alignment:
Q  340 catcaattgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||||||||| |||||| | ||||||||||||||||||    
T  19443324 catcaattgaatctaacaccctattataataataattcatcaa 19443366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 382
Target Start/End: Complemental strand, 11965225 - 11965184
Alignment:
Q  341 atcaattgaatctatcaccctgtcataataataattcatcaa 382  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  11965225 atcaattgaatctaacactctatcataataataattcatcaa 11965184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 384
Target Start/End: Original strand, 12202170 - 12202215
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| ||||||  ||||||||| |||||||||||    
T  12202170 tcatcaattgaatctaacaccctaacataataatgattcatcaata 12202215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 166; Significance: 9e-89; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 207 - 384
Target Start/End: Complemental strand, 41878480 - 41878303
Alignment:
Q  207 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcata 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41878480 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcata 41878381  T
Q  307 atcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||    
T  41878380 atcaacaatatcatcaataatagatatctaactcatcaattaaatctatcaccctgtcataaaaataattcatcaata 41878303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 207 - 384
Target Start/End: Complemental strand, 23113231 - 23113054
Alignment:
Q  207 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcata 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23113231 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcata 23113132  T
Q  307 atcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    ||||||||||||||||||||||||||| || |||||||||| |||||| |||||||||||||||||||||||||||||    
T  23113131 atcaacaatatcatcaataatagatatataactcatcaattaaatctaacaccctgtcataataataattcatcaata 23113054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 207 - 384
Target Start/End: Complemental strand, 38146247 - 38146070
Alignment:
Q  207 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcata 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  38146247 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataacttaaattatccaatatatgtatatatttcata 38146148  T
Q  307 atcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||| |||||| ||||||||||||||||||||||    
T  38146147 atcaacaatatcatcaataatagatatctaactcatcaattaaatctaacaccctatcataataataattcatcaata 38146070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 210 - 384
Target Start/End: Original strand, 22339331 - 22339505
Alignment:
Q  210 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcataatc 309  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  22339331 acaataatgttcttactcctttaactttagtaacagttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcataatg 22339430  T
Q  310 aacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    ||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||    
T  22339431 aacaatatcatcaataatagatatctaactcatcaattaaatctaacaccctgtcataataataattcatcaata 22339505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 210 - 384
Target Start/End: Original strand, 22335793 - 22335967
Alignment:
Q  210 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcataatc 309  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  22335793 acaataatgttcttactcctttaactttagtaacagttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcataatg 22335892  T
Q  310 aacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    ||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||| ||||||||||||    
T  22335893 aacaatatcatcaataatagatatctaactcatcaattaaatctaacaccctgtcataataacaattcatcaata 22335967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 267 - 384
Target Start/End: Original strand, 22749494 - 22749611
Alignment:
Q  267 acgataactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcat 366  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||| |||||||||||    
T  22749494 acgacaactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctaattcatcaattaaatctaacaccctgtcat 22749593  T
Q  367 aataataattcatcaata 384  Q
    ||||||||||||||||||    
T  22749594 aataataattcatcaata 22749611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 272 - 384
Target Start/End: Complemental strand, 28371856 - 28371744
Alignment:
Q  272 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataa 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||    
T  28371856 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctaactcatcaattaaatctaacaccctgtcataataa 28371757  T
Q  372 taattcatcaata 384  Q
    ||||| |||||||    
T  28371756 taatttatcaata 28371744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 267 - 384
Target Start/End: Original strand, 9775210 - 9775327
Alignment:
Q  267 acgataactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcat 366  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||| ||| ||||||||||||||    
T  9775210 acgacaactacaattatccaatatatgtatatatttcataatcaataatatcatcaataatagatatctaactcaccaattaaatatatcaccctgtcat 9775309  T
Q  367 aataataattcatcaata 384  Q
    ||||||||||||||||||    
T  9775310 aataataattcatcaata 9775327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 272 - 384
Target Start/End: Complemental strand, 37599724 - 37599612
Alignment:
Q  272 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataa 371  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||| |||||| ||||||||||||||||    
T  37599724 aactacaattatccaatatatgtatatatttcatagtcaacaatatcatcaataatagatatctaattcatcaattaaatctaacaccctgtcataataa 37599625  T
Q  372 taattcatcaata 384  Q
    |||||||||||||    
T  37599624 taattcatcaata 37599612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 272 - 384
Target Start/End: Original strand, 42959828 - 42959940
Alignment:
Q  272 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataa 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||| |||||| ||||||||||||||||    
T  42959828 aactacaattatccaatatatgtatatatttcataatcaacaatatcaccaataatagatatctaattcatcaattaaatctaacaccctgtcataataa 42959927  T
Q  372 taattcatcaata 384  Q
    |||||||||||||    
T  42959928 taattcatcaata 42959940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 272 - 384
Target Start/End: Original strand, 19510776 - 19510888
Alignment:
Q  272 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataa 371  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |  ||||||||| |||||| || |||||||||||||    
T  19510776 aactacaattatccaatatatgtatatatttcatgatcaacaatatcatcaataatagatatccaattcatcaattaaatctaacatcctgtcataataa 19510875  T
Q  372 taattcatcaata 384  Q
    |||||||||||||    
T  19510876 taattcatcaata 19510888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 207 - 280
Target Start/End: Original strand, 9775101 - 9775174
Alignment:
Q  207 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaat 280  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9775101 ttaacaataatgttattacttctttaactttagtaacacttactaattcaaccaacaacgacgataacaacaat 9775174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 19510664 - 19510734
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||    
T  19510664 aacaataatgttcttacttctttaactttagtaacacttgctaattcaaccaacaacgacgacaacaacaa 19510734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 22469508 - 22469569
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22469508 aacaataatattcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 22469569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 212 - 279
Target Start/End: Original strand, 10816060 - 10816127
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  10816060 aataatattcttacttctttaactttagtaacacttactaattcaaccaacaacgacgacaacgacaa 10816127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 212 - 279
Target Start/End: Original strand, 23538059 - 23538126
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  23538059 aataatattcttacttctttaactttagtaacacttactaattcaaccaacaacgacgacaacaacaa 23538126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 279
Target Start/End: Complemental strand, 22358526 - 22358456
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||| ||||    
T  22358526 aacaataatgttcttacttctttaactttagtaacacttactaattcaattaacaacgacgacaacaacaa 22358456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 22749363 - 22749433
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||    
T  22749363 aacaataatattcttacttctttaactttagtaacactttctaattcaaccaacaacgacgacaacaacaa 22749433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 279
Target Start/End: Complemental strand, 24277972 - 24277902
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||| ||||    
T  24277972 aacaataatgttcttacttcttcaactttaataacacttactaattcaaccaacaacgacgacaacaacaa 24277902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 24384241 - 24384311
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||| ||||    
T  24384241 aacaataatgttcttacttcttcaactttaataacacttactaattcaaccaacaacgacgacaacaacaa 24384311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 42959717 - 42959778
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  42959717 aacaataatgttcttacttctttaactttagtaacactttctaattcaaccagcaacgacga 42959778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 37599835 - 37599777
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacga 267  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  37599835 aacaataatgttcttacttctttaactttagtaacacttgctaattcaaccatcaacga 37599777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 22232967 - 22232922
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||    
T  22232967 tcatcaattgaatctaacaccctatcataataataattcatcaata 22232922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 268
Target Start/End: Complemental strand, 29325999 - 29325941
Alignment:
Q  210 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    |||||||| ||| |||||||| ||||||| |||| |||||||| |||||||||||||||    
T  29325999 acaataatattcatacttcttcaactttaataactcttactaaatcaaccaacaacgac 29325941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 325
Target Start/End: Original strand, 10034977 - 10035032
Alignment:
Q  270 ataactacaattatccaatatatgtatatatttcataatcaacaatatcatcaata 325  Q
    ||||| |||||||| |||||||  ||||||||||||||| ||||| ||||||||||    
T  10034977 ataacaacaattattcaatatacatatatatttcataattaacaacatcatcaata 10035032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 43120581 - 43120640
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    ||||||||| ||| ||||||||  |||||| |||| |||||||| |||||||||||||||    
T  43120581 aacaataatattcatacttcttcgactttaataactcttactaaatcaaccaacaacgac 43120640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 43124114 - 43124173
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    ||||||||| ||| ||||||||  |||||| |||| |||||||| |||||||||||||||    
T  43124114 aacaataatattcatacttcttcgactttaataactcttactaaatcaaccaacaacgac 43124173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 340 - 382
Target Start/End: Complemental strand, 6728584 - 6728542
Alignment:
Q  340 catcaattgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||||||||| ||| || ||||||||||||||||||||    
T  6728584 catcaattgaatctaacactctatcataataataattcatcaa 6728542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 340 - 382
Target Start/End: Complemental strand, 22008248 - 22008206
Alignment:
Q  340 catcaattgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||||||||| |||||| ||| ||||||||||||||||    
T  22008248 catcaattgaatctaacaccctatcaaaataataattcatcaa 22008206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 326
Target Start/End: Original strand, 21888417 - 21888465
Alignment:
Q  278 aattatccaatatatgtatatatttcataatcaacaatatcatcaataa 326  Q
    |||||| |||||||  ||||||||||||||| ||||| |||||||||||    
T  21888417 aattattcaatatacatatatatttcataattaacaacatcatcaataa 21888465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 384
Target Start/End: Original strand, 34828841 - 34828885
Alignment:
Q  340 catcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||    
T  34828841 catcaaatgaatctaacaccctatcatcataataattcatcaata 34828885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 163; Significance: 6e-87; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 210 - 384
Target Start/End: Complemental strand, 19663317 - 19663143
Alignment:
Q  210 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcataatc 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19663317 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcataatc 19663218  T
Q  310 aacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    ||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||    
T  19663217 aacaatatcatcaataatagatatctaactcatcaattaaatctaacaccctgtcataataataattcatcaata 19663143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 207 - 384
Target Start/End: Original strand, 20260507 - 20260684
Alignment:
Q  207 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcata 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20260507 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacgacgacgataactacaattatccaatatatgtatatatttcata 20260606  T
Q  307 atcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||    
T  20260607 atcaacaatatcatcaataatagatatctaactcatcaattaaatatatcaccctgtcataataataattcatcaata 20260684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 207 - 384
Target Start/End: Complemental strand, 10686118 - 10685941
Alignment:
Q  207 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcata 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10686118 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacgacgacgataactacaattatccaatatatgtatatatttcata 10686019  T
Q  307 atcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||| ||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  10686018 atcaacaatatcgtcaataataaatatctaactcatcaattaaatctatcaccctgtcataataataattcatcaata 10685941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 210 - 384
Target Start/End: Complemental strand, 6262039 - 6261865
Alignment:
Q  210 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcataatc 309  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6262039 acaataatgttcttacttctttaactttagtaacagttactaattcaaccaacaacgacgataactacaattattcaatatatgtatatatttcataatc 6261940  T
Q  310 aacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    ||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||| |||||||    
T  6261939 aacaatatcatcaataatagatatctaactcatcaattaaatctaacaccctgtcataataataatttatcaata 6261865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 272 - 384
Target Start/End: Original strand, 9241079 - 9241191
Alignment:
Q  272 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataa 371  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||| ||||||||||||||||    
T  9241079 aactacaaatatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctaattcatcaattaaatctaacaccctgtcataataa 9241178  T
Q  372 taattcatcaata 384  Q
    |||||||||||||    
T  9241179 taattcatcaata 9241191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 272 - 384
Target Start/End: Original strand, 6482098 - 6482210
Alignment:
Q  272 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataa 371  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |  ||||||||| |||||| || |||||||||||||    
T  6482098 aactacaattatccaatatatgtatatatttcatgatcaacaatatcatcaataatagatatccaattcatcaattaaatctaacatcctgtcataataa 6482197  T
Q  372 taattcatcaata 384  Q
    |||||||||||||    
T  6482198 taattcatcaata 6482210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 272 - 384
Target Start/End: Original strand, 6485565 - 6485677
Alignment:
Q  272 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataa 371  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |  ||||||||| |||||| || |||||||||||||    
T  6485565 aactacaattatccaatatatgtatatatttcatgatcaacaatatcatcaataatagatatccaattcatcaattaaatctaacatcctgtcataataa 6485664  T
Q  372 taattcatcaata 384  Q
    |||||||||||||    
T  6485665 taattcatcaata 6485677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 212 - 279
Target Start/End: Original strand, 26895971 - 26896038
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  26895971 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgacaacaacaa 26896038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 6481986 - 6482056
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||    
T  6481986 aacaataatgttcttacttctttaactttagtaacacttgctaattcaaccaacaacgacgacaacaacaa 6482056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 6485453 - 6485523
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||    
T  6485453 aacaataatgttcttacttctttaactttagtaacacttgctaattcaaccaacaacgacgacaacaacaa 6485523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 212 - 279
Target Start/End: Complemental strand, 6478663 - 6478596
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  6478663 aataatgttcctacttctttaactttagtaacacttactaattcaaccaacaacgacgacaacaacaa 6478596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 9240919 - 9240989
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||| ||||    
T  9240919 aacaataatgttcttacttctttaactttagtaacacttgctagttcaaccaacaacgacgacaacaacaa 9240989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 267 - 326
Target Start/End: Complemental strand, 21074294 - 21074235
Alignment:
Q  267 acgataactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataa 326  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21074294 acgacaactacaattatccaatatatgtatatatttcataatcaacaacatcatcaataa 21074235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 279
Target Start/End: Original strand, 22702738 - 22702805
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||    
T  22702738 aataatattcttacttctttaactttagtaacacttactaattcaatcaacaacgacgacaacaacaa 22702805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 23374666 - 23374736
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    ||||| ||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||| ||| ||||    
T  23374666 aacaaaaatgttcatacttcttcaactttaataacacttactaattcaaccaacaacgacgacaacaacaa 23374736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 214 - 279
Target Start/End: Complemental strand, 10040572 - 10040507
Alignment:
Q  214 taatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||| ||| |||||||  ||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  10040572 taatattcatacttctacaactttagtaacacttactaattcaaccaacaacgacgacaaccacaa 10040507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 19803523 - 19803569
Alignment:
Q  224 acttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  19803523 acttcttcaactttaataacacttactaattcaaccaacaacgacga 19803569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 329
Target Start/End: Complemental strand, 29753046 - 29753004
Alignment:
Q  287 atatatgtatatatttcataatcaacaatatcatcaataatag 329  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  29753046 atatatatatatatttcataatcaacaatatcatcaataatag 29753004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 339 - 384
Target Start/End: Original strand, 23290778 - 23290823
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||    
T  23290778 tcatcaattgaatctaacaccctatcataataataattcatcaata 23290823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 24275985 - 24275940
Alignment:
Q  225 cttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||    
T  24275985 cttcttcaactttaataacacttactaattcaaccaacaacgacga 24275940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 270
Target Start/End: Original strand, 22109202 - 22109260
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    |||||||||| |||||||| || |||| |||||||||||||| ||| ||||||||||||    
T  22109202 aataatgttcatacttcttcaattttaataacacttactaatccaatcaacaacgacga 22109260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 22797004 - 22796959
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||    
T  22797004 tcatcaattgaatctaacaccctaacataataataattcatcaata 22796959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 31502927 - 31502986
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    ||||||||| ||| ||||||||  |||||| |||| |||||||| |||||||||||||||    
T  31502927 aacaataatattcatacttcttcgactttaataactcttactaaatcaaccaacaacgac 31502986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 31505493 - 31505552
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    ||||||||| ||| ||||||||  |||||| |||| |||||||| |||||||||||||||    
T  31505493 aacaataatattcatacttcttcgactttaataactcttactaaatcaaccaacaacgac 31505552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 382
Target Start/End: Original strand, 20723893 - 20723929
Alignment:
Q  346 ttgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  20723893 ttgaatctaacaccctatcataataataattcatcaa 20723929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 326
Target Start/End: Complemental strand, 20914642 - 20914594
Alignment:
Q  278 aattatccaatatatgtatatatttcataatcaacaatatcatcaataa 326  Q
    |||||| |||||||  ||||||||||||||| ||||| |||||||||||    
T  20914642 aattattcaatatacatatatatttcataattaacaacatcatcaataa 20914594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 382
Target Start/End: Original strand, 22809742 - 22809778
Alignment:
Q  346 ttgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  22809742 ttgaatctaacaccctatcataataataattcatcaa 22809778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 23148437 - 23148473
Alignment:
Q  287 atatatgtatatatttcataatcaacaatatcatcaa 323  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  23148437 atatatatatatatttcataatcaacaacatcatcaa 23148473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 23560227 - 23560263
Alignment:
Q  287 atatatgtatatatttcataatcaacaatatcatcaa 323  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  23560227 atatatatatatatttcataatcaacaacatcatcaa 23560263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 162; Significance: 2e-86; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 207 - 384
Target Start/End: Original strand, 29795413 - 29795590
Alignment:
Q  207 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcata 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  29795413 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacgacgacgataactacaattatccaatatatgtatatatttcata 29795512  T
Q  307 atcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||    
T  29795513 atcaacaatatcatcaataatagatatctaactcatcaattaaatatatcaccctgtcataataataattcatcaata 29795590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 207 - 384
Target Start/End: Original strand, 29799232 - 29799409
Alignment:
Q  207 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcata 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  29799232 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacgacgacgataactacaattatccaatatatgtatatatttcata 29799331  T
Q  307 atcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||    
T  29799332 atcaacaatatcatcaataatagatatctaactcatcaattaaatatatcaccctgtcataataataattcatcaata 29799409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 207 - 384
Target Start/End: Original strand, 18871547 - 18871724
Alignment:
Q  207 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcata 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18871547 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcata 18871646  T
Q  307 atcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||||||||||||||||| ||| |||||| |||||| |||||||||||| ||||||||||||||||    
T  18871647 atcaacaatatcatcaataatagatatctaactcttcaatttaatctaacaccctgtcatagtaataattcatcaata 18871724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 209 - 384
Target Start/End: Original strand, 146752 - 146927
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcataat 308  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  146752 aacaataatgttcttacttctttaactttagtaacacttgctaattcaatcaacaacgacgataactacaattatccaatatatgtatatatttcataat 146851  T
Q  309 caacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||||||| ||||||| |||||||||| |||||| |||||| ||||||||||||||||||||||    
T  146852 caacaatatcatcaataatatatatctaactcatcaattaaatctaacaccctatcataataataattcatcaata 146927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 272 - 384
Target Start/End: Original strand, 15166520 - 15166632
Alignment:
Q  272 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataa 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||| ||||||||||||||||    
T  15166520 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctaattcatcaattaaatctaacaccctgtcataataa 15166619  T
Q  372 taattcatcaata 384  Q
    |||||||||||||    
T  15166620 taattcatcaata 15166632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 272 - 384
Target Start/End: Original strand, 16007830 - 16007942
Alignment:
Q  272 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataa 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||| ||||||||||||||||    
T  16007830 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctaattcatcaattaaatctaacaccctgtcataataa 16007929  T
Q  372 taattcatcaata 384  Q
    |||||||||||||    
T  16007930 taattcatcaata 16007942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 267 - 384
Target Start/End: Complemental strand, 23666261 - 23666144
Alignment:
Q  267 acgataactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcat 366  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||| ||| ||||||||||||||    
T  23666261 acgacaactacaattatccaatatatgtatatatttcataatcaataatatcatcaataatagatatctaactcaccaattaaatatatcaccctgtcat 23666162  T
Q  367 aataataattcatcaata 384  Q
    ||||||||||||||||||    
T  23666161 aataataattcatcaata 23666144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 274 - 383
Target Start/End: Complemental strand, 10897610 - 10897501
Alignment:
Q  274 ctacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataata 373  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||| ||| ||||||||||||||    
T  10897610 ctacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctaattcatcaattaaatctaacactctgtcataataata 10897511  T
Q  374 attcatcaat 383  Q
    ||||||||||    
T  10897510 attcatcaat 10897501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 272 - 384
Target Start/End: Original strand, 14421101 - 14421212
Alignment:
Q  272 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataa 371  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||| |||||| ||||||||||||||||    
T  14421101 aactacaattatccagtatatgtatatatttcataatcaacaatatcatcaataatagatatc-aaatcatcaattaaatctaacaccctgtcataataa 14421199  T
Q  372 taattcatcaata 384  Q
    |||||||||||||    
T  14421200 taattcatcaata 14421212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 272 - 384
Target Start/End: Original strand, 14565456 - 14565568
Alignment:
Q  272 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataa 371  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||  ||||||||| |||||| ||||||| ||||||||    
T  14565456 aactacaattatccaatatatgtatacatttcataatcaacaatatcattaataatagatatctaattcatcaattaaatctaacaccctgacataataa 14565555  T
Q  372 taattcatcaata 384  Q
    |||||||||||||    
T  14565556 taattcatcaata 14565568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 267 - 381
Target Start/End: Original strand, 11302596 - 11302710
Alignment:
Q  267 acgataactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcat 366  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||| ||  ||||| ||||||| |||    
T  11302596 acgacaactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatccaattcatcatttacatctaacaccctgccat 11302695  T
Q  367 aataataattcatca 381  Q
    |||||||||||||||    
T  11302696 aataataattcatca 11302710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 207 - 279
Target Start/End: Original strand, 18606588 - 18606660
Alignment:
Q  207 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18606588 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataacaacaa 18606660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 207 - 280
Target Start/End: Complemental strand, 23666370 - 23666297
Alignment:
Q  207 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaat 280  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23666370 ttaacaataatgttattacttctttaactttagtaacacttactaattcaaccaacaacgacgataacaacaat 23666297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 11660569 - 11660639
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  11660569 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgacaacaacaa 11660639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 13255217 - 13255287
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  13255217 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgacaacaacaa 13255287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 207 - 279
Target Start/End: Original strand, 14565338 - 14565410
Alignment:
Q  207 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||    
T  14565338 ttaacaataatgttcttacttctttaactttagtaatacttactaattcaaccaacaacaacgataacaacaa 14565410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 14420989 - 14421059
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||    
T  14420989 aacaataatgttcttacttctttaactttagtaacacttgctaattcaaccaacaacgacgacaacaacaa 14421059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 212 - 279
Target Start/End: Complemental strand, 16109796 - 16109729
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  16109796 aataatattcttacttctttaactttagtaacacttactaattcaaccaacaacgacgacaacaacaa 16109729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 212 - 279
Target Start/End: Original strand, 29003578 - 29003645
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  29003578 aataatattcttacttctttaactttagtaacacttactaattcaaccaacaacgacgacaacaacaa 29003645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 212 - 279
Target Start/End: Original strand, 34956892 - 34956959
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  34956892 aataatattcttacttctttaactttagtaacacttactaattcaaccaacaacgacgacaacaacaa 34956959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 212 - 279
Target Start/End: Original strand, 48742929 - 48742996
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||    
T  48742929 aataatgttcttacttctttaactttagtaacacttactaattcaaccgacaacgacgacaacaacaa 48742996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 11302465 - 11302535
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||| ||||    
T  11302465 aacaataatgttcttacttctttaactttagtaacgcttgctaattcaaccaacaacgacgacaacaacaa 11302535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 10897723 - 10897662
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  10897723 aacaataatgttcttacttctttaactttagtaacacttgctaattcaaccatcaacgacga 10897662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 210 - 279
Target Start/End: Original strand, 16572857 - 16572926
Alignment:
Q  210 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||| ||||    
T  16572857 acaataatgttcttacttcttcaactttaataacacttactaattcaaccaacaacgacgacaacaacaa 16572926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 210 - 279
Target Start/End: Complemental strand, 16592805 - 16592736
Alignment:
Q  210 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||| ||||    
T  16592805 acaataatgttcttacttcttcaactttaataacacttactaattcaaccaacaacgacgacaacaacaa 16592736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 279
Target Start/End: Complemental strand, 833820 - 833753
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||    
T  833820 aataatattcttacttctttaactttagtaacacttattaattcaaccaacaacgacgacaacaacaa 833753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 279
Target Start/End: Complemental strand, 1199000 - 1198933
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||    
T  1199000 aataatattcttacttctttaactttagtaacacttattaattcaaccaacaacgacgacaacaacaa 1198933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 267 - 326
Target Start/End: Original strand, 18606729 - 18606788
Alignment:
Q  267 acgataactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataa 326  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18606729 acgacaactacaattatccaatatatgtatatatttcataatcaacaacatcatcaataa 18606788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 15166408 - 15166478
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| ||||    
T  15166408 aacaataatattcttacttctttaactttagtaacacttgctaattcaatcaacaacgacgacaacaacaa 15166478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 211 - 279
Target Start/End: Complemental strand, 13850400 - 13850332
Alignment:
Q  211 caataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||| ||| ||||    
T  13850400 caataatgttcatacttcttcaactttaataacacttactaattcaaccaacaacgacgacaaccacaa 13850332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 16007681 - 16007732
Alignment:
Q  219 ttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16007681 ttcttacttctttaactttagtaacacttgctaattcaaccaacaacgacga 16007732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 270
Target Start/End: Complemental strand, 837849 - 837791
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    |||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  837849 aataatattcttacttctttaactttattaacacttattaattcaaccaacaacgacga 837791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 270
Target Start/End: Complemental strand, 1203029 - 1202971
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    |||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  1203029 aataatattcttacttctttaactttattaacacttattaattcaaccaacaacgacga 1202971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 317 - 381
Target Start/End: Complemental strand, 16109419 - 16109355
Alignment:
Q  317 tcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatca 381  Q
    ||||||||||||||||| ||| ||||||||| |||||| |||||| |||||||||||||||||||    
T  16109419 tcatcaataatagatatatagttcatcaattaaatctaacaccctttcataataataattcatca 16109355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 317 - 384
Target Start/End: Complemental strand, 837294 - 837227
Alignment:
Q  317 tcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    ||||||||||||||||| ||  ||||||||| |||||| |||||| ||||||||||||||||||||||    
T  837294 tcatcaataatagatatataattcatcaattaaatctaacaccctatcataataataattcatcaata 837227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 317 - 384
Target Start/End: Complemental strand, 1202474 - 1202407
Alignment:
Q  317 tcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    ||||||||||||||||| ||  ||||||||| |||||| |||||| ||||||||||||||||||||||    
T  1202474 tcatcaataatagatatataattcatcaattaaatctaacaccctatcataataataattcatcaata 1202407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 317 - 384
Target Start/End: Complemental strand, 833298 - 833231
Alignment:
Q  317 tcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    ||||||||||||||||| ||  ||||||||| |||||| ||| || ||||||||||||||||||||||    
T  833298 tcatcaataatagatatataattcatcaattaaatctaacactctatcataataataattcatcaata 833231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 317 - 384
Target Start/End: Complemental strand, 1198478 - 1198411
Alignment:
Q  317 tcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    ||||||||||||||||| ||  ||||||||| |||||| ||| || ||||||||||||||||||||||    
T  1198478 tcatcaataatagatatataattcatcaattaaatctaacactctatcataataataattcatcaata 1198411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 3290110 - 3290065
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||    
T  3290110 tcatcaattgaatctaacaccctatcataataataattcatcaata 3290065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 35365639 - 35365698
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    ||||||||| ||| |||||||| ||||||| |||| |||||||| |||||||||||||||    
T  35365639 aacaataatattcctacttcttcaactttaataactcttactaaatcaaccaacaacgac 35365698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 268
Target Start/End: Original strand, 4992853 - 4992911
Alignment:
Q  210 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    |||||||| ||| |||||||| ||||||| |||| |||||||| |||||||||||||||    
T  4992853 acaataatattcatacttcttcaactttaataactcttactaaatcaaccaacaacgac 4992911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 268
Target Start/End: Original strand, 16005682 - 16005740
Alignment:
Q  210 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    |||||||| ||| |||||||| ||||||| |||| |||||||| |||||||||||||||    
T  16005682 acaataatattcatacttcttcaactttaataactcttactaaatcaaccaacaacgac 16005740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 14189780 - 14189719
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    ||||||||||||| | || ||| || |||| |||||||||||||| ||||||||||||||||    
T  14189780 aacaataatgttcatcctccttcaattttaataacacttactaatccaaccaacaacgacga 14189719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 14192535 - 14192474
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    ||||||||||||| | || ||| || |||| |||||||||||||| ||||||||||||||||    
T  14192535 aacaataatgttcatcctccttcaattttaataacacttactaatccaaccaacaacgacga 14192474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 340 - 381
Target Start/End: Complemental strand, 14946166 - 14946125
Alignment:
Q  340 catcaattgaatctatcaccctgtcataataataattcatca 381  Q
    ||||||||||||||| |||||| |||||||||||||||||||    
T  14946166 catcaattgaatctaacaccctatcataataataattcatca 14946125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 340 - 381
Target Start/End: Complemental strand, 15373759 - 15373718
Alignment:
Q  340 catcaattgaatctatcaccctgtcataataataattcatca 381  Q
    ||||||||||||||| |||||| |||||||||||||||||||    
T  15373759 catcaattgaatctaacaccctatcataataataattcatca 15373718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 326
Target Start/End: Original strand, 13678156 - 13678204
Alignment:
Q  279 attatccaatatatgtatatattt-cataatcaacaatatcatcaataa 326  Q
    ||||||||||||||||||| |||| |||||||||||| |||||||||||    
T  13678156 attatccaatatatgtataaattttcataatcaacaacatcatcaataa 13678204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 8775664 - 8775723
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    ||||||||| ||| ||||||||  |||||| |||| |||||||| |||||||||||||||    
T  8775664 aacaataatattcatacttcttcgactttaataactcttactaaatcaaccaacaacgac 8775723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 21744064 - 21744005
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    ||||||||| ||| ||||||||  |||||| |||| |||||||| |||||||||||||||    
T  21744064 aacaataatattcatacttcttcgactttaataactcttactaaatcaaccaacaacgac 21744005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 15437947 - 15437902
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| ||||||  ||| |||||||||||||||||    
T  15437947 tcatcaattgaatctaacaccctaacattataataattcatcaata 15437902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 323
Target Start/End: Complemental strand, 16668856 - 16668811
Alignment:
Q  278 aattatccaatatatgtatatatttcataatcaacaatatcatcaa 323  Q
    |||| |||||||||  ||||||||||||||||||||| ||||||||    
T  16668856 aattctccaatatacatatatatttcataatcaacaacatcatcaa 16668811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 327
Target Start/End: Original strand, 45185326 - 45185375
Alignment:
Q  278 aattatccaatatatgtatatatttcataatcaacaatatcatcaataat 327  Q
    |||||| |||||||  ||||||||||||||||||||| |||| |||||||    
T  45185326 aattattcaatataaatatatatttcataatcaacaacatcaacaataat 45185375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 162; Significance: 2e-86; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 207 - 384
Target Start/End: Original strand, 15533469 - 15533646
Alignment:
Q  207 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcata 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15533469 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacgacgacgataactacaattatccaatatatgtatatatttcata 15533568  T
Q  307 atcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||    
T  15533569 atcaacaatatcatcaataatagatatctaactcatcaattaaatatatcaccctgtcataataataattcatcaata 15533646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 207 - 384
Target Start/End: Original strand, 36037202 - 36037379
Alignment:
Q  207 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcata 306  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36037202 ttaacaataatgttcttacctctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcata 36037301  T
Q  307 atcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  36037302 atcaacaatatcatcaataaaagatatctaactcatcaattaaatctatcaccctgtcataataataattcatcaata 36037379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 207 - 302
Target Start/End: Complemental strand, 49548911 - 49548816
Alignment:
Q  207 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatattt 302  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49548911 ttaacaataatgttcttacttctttacctttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatattt 49548816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 18211877 - 18211947
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18211877 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataacaacaa 18211947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 209 - 279
Target Start/End: Complemental strand, 24048176 - 24048106
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  24048176 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgacaacaacaa 24048106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 15989484 - 15989545
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15989484 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 15989545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 212 - 279
Target Start/End: Complemental strand, 4832061 - 4831994
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  4832061 aataatattcttacttctttaactttagtaacacttactaattcaaccaacaacgacgacaacaacaa 4831994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 212 - 279
Target Start/End: Complemental strand, 4835356 - 4835289
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  4835356 aataatattcttacttctttaactttagtaacacttactaattcaaccaacaacgacgacaacaacaa 4835289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 279
Target Start/End: Original strand, 14047474 - 14047541
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  14047474 aataatattcttaattctttaactttagtaacacttactaattcaaccaacaacgacgacaacaacaa 14047541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 279
Target Start/End: Original strand, 30146038 - 30146105
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  30146038 aataatattcttccttctttaactttagtaacacttactaattcaaccaacaacgacgacaacaacaa 30146105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 317 - 384
Target Start/End: Original strand, 30146601 - 30146668
Alignment:
Q  317 tcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    ||||||||||||||||||||  ||||||||| |||||| |||||||||||||||||||||||||||||    
T  30146601 tcatcaataatagatatctaattcatcaattaaatctaacaccctgtcataataataattcatcaata 30146668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 317 - 384
Target Start/End: Original strand, 14047854 - 14047921
Alignment:
Q  317 tcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    ||||||||||||||||| ||| ||||||||| |||||| |||||| ||||||||||||||||||||||    
T  14047854 tcatcaataatagatatatagttcatcaattaaatctaacaccctatcataataataattcatcaata 14047921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 279 - 326
Target Start/End: Original strand, 18212014 - 18212061
Alignment:
Q  279 attatccaatatatgtatatatttcataatcaacaatatcatcaataa 326  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||    
T  18212014 attatccaatatatgtatatatttcataatcaacaacatcatcaataa 18212061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 33685180 - 33685124
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaac 265  Q
    ||||||||||||| |||||||| ||||||| |||||||||||||| |||||||||||    
T  33685180 aacaataatgttcatacttcttcaactttaataacacttactaatccaaccaacaac 33685124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 20900192 - 20900137
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaa 264  Q
    ||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||||    
T  20900192 aacaataatgttcatacttcttcaactttaataacacttattaattcaaccaacaa 20900137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 27027292 - 27027347
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaa 264  Q
    ||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||||    
T  27027292 aacaataatgttcatacttcttcaactttaataacacttattaattcaaccaacaa 27027347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 2585497 - 2585452
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||    
T  2585497 tcatcaattgaatctaacaccctatcataataataattcatcaata 2585452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 3336815 - 3336876
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    |||||||||||||   |||||| ||||||| ||||||||||||||||||||| |||||||||    
T  3336815 aacaataatgttcacgcttcttcaactttaataacacttactaattcaaccagcaacgacga 3336876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 212 - 270
Target Start/End: Complemental strand, 4828766 - 4828705
Alignment:
Q  212 aataatgttcttacttct---ttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    |||||| |||||||||||   |||||||||| | ||||||||||||||||||||||||||||    
T  4828766 aataatattcttacttctaatttaactttagaatcacttactaattcaaccaacaacgacga 4828705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 340 - 382
Target Start/End: Original strand, 16221083 - 16221125
Alignment:
Q  340 catcaattgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  16221083 catcaattgaatctaacaccctatcataataataattcatcaa 16221125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 17142574 - 17142608
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaac 243  Q
    |||||||||||||||||||||||||||||||||||    
T  17142574 aacaataatgttcttacttctttaactttagtaac 17142608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 340 - 382
Target Start/End: Complemental strand, 41529409 - 41529367
Alignment:
Q  340 catcaattgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  41529409 catcaattgaatctaacaccctatcataataataattcatcaa 41529367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 13877452 - 13877509
Alignment:
Q  213 ataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    ||||||||| |||||||| || |||| |||||||||||||| ||| ||||||||||||    
T  13877452 ataatgttcatacttcttcaattttaataacacttactaatccaatcaacaacgacga 13877509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 13881147 - 13881208
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    ||||||||||||| |||||||| || |||| |||||||||||||| ||| |||||| |||||    
T  13881147 aacaataatgttcatacttcttcaattttaataacacttactaatccaatcaacaatgacga 13881208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 4170366 - 4170425
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    ||||||||| ||| ||||||||  |||||| |||| |||||||| |||||||||||||||    
T  4170366 aacaataatattcatacttcttcgactttaataactcttactaaatcaaccaacaacgac 4170425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 14698091 - 14698150
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    ||||||||| ||| ||||||||  |||||| |||| |||||||| |||||||||||||||    
T  14698091 aacaataatattcatacttcttcgactttaataactcttactaaatcaaccaacaacgac 14698150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 267
Target Start/End: Original strand, 28916798 - 28916853
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacga 267  Q
    |||||||||| |||||||| || |||| |||||||||||||| ||| |||||||||    
T  28916798 aataatgttcatacttcttcaattttaataacacttactaatccaatcaacaacga 28916853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 31132054 - 31131995
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    ||||||||| ||| ||||||||  |||||| |||| |||||||| |||||||||||||||    
T  31132054 aacaataatattcatacttcttcgactttaataactcttactaaatcaaccaacaacgac 31131995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 382
Target Start/End: Original strand, 40908435 - 40908478
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaa 382  Q
    |||||||||||||||| |||||| |||| |||||||||||||||    
T  40908435 tcatcaattgaatctaacaccctatcatgataataattcatcaa 40908478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 41791042 - 41791101
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    ||||||||| ||| |||||||| || |||| |||| |||||||| |||||||||||||||    
T  41791042 aacaataatattcatacttcttcaattttaataactcttactaaatcaaccaacaacgac 41791101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 43258672 - 43258613
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    |||| |||| ||| |||||||| ||||||| ||||||||||||| ||||||||| |||||    
T  43258672 aacattaatattcatacttcttcaactttaataacacttactaaatcaaccaacgacgac 43258613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 340 - 382
Target Start/End: Original strand, 16156477 - 16156519
Alignment:
Q  340 catcaattgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||||||||| |||||| |||||||||||| |||||||    
T  16156477 catcaattgaatctaacaccctatcataataataaatcatcaa 16156519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 339 - 383
Target Start/End: Complemental strand, 14556412 - 14556368
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaat 383  Q
    |||||||||||||||| |||| |  ||||||||||||||||||||    
T  14556412 tcatcaattgaatctaacaccataacataataataattcatcaat 14556368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 382
Target Start/End: Original strand, 15324736 - 15324772
Alignment:
Q  346 ttgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  15324736 ttgaatctagcaccctatcataataataattcatcaa 15324772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 382
Target Start/End: Complemental strand, 26078029 - 26077993
Alignment:
Q  346 ttgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  26078029 ttgaatctaacaccctatcataataataattcatcaa 26077993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 272
Target Start/End: Original strand, 28382271 - 28382331
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgata 272  Q
    |||||| ||| |||||||| || |||| |||||||||||||| ||| ||||||| ||||||    
T  28382271 aataatattcatacttcttcaattttaataacacttactaatccaatcaacaacaacgata 28382331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 146; Significance: 8e-77; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 207 - 384
Target Start/End: Original strand, 4476046 - 4476223
Alignment:
Q  207 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcata 306  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4476046 ttaacaataatgttcttacttcttaatctttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcata 4476145  T
Q  307 atcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||||||||||||||||| ||| |||||| |||||| |||| ||||||| ||||||||||||||||    
T  4476146 atcaacaatatcatcaataatagatatctaactcttcaatttaatctaacaccatgtcatagtaataattcatcaata 4476223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 207 - 384
Target Start/End: Original strand, 12941471 - 12941660
Alignment:
Q  207 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatcca------------atatatgt 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            |||||| |    
T  12941471 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatatatatatatatat 12941570  T
Q  295 atatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  12941571 atatatttcataatcaacaatatcatcaataataaatatctaactcatcaattaaatctatcaccctgtcataataataattcatcaata 12941660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 267 - 384
Target Start/End: Complemental strand, 28290640 - 28290523
Alignment:
Q  267 acgataactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcat 366  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||  ||||| ||| ||| |||    
T  28290640 acgacaactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatccaattcatcaattacatctaacactctgccat 28290541  T
Q  367 aataataattcatcaata 384  Q
    |||||||||||| |||||    
T  28290540 aataataattcaccaata 28290523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 24266445 - 24266504
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24266445 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 24266504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 221392 - 221462
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||    
T  221392 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacaacgacaacaacaa 221462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 23351758 - 23351816
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacga 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23351758 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacga 23351816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 212 - 279
Target Start/End: Complemental strand, 29848976 - 29848909
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  29848976 aataatgtttttacttctttaactttagtaacacttactaattcaaccaacaacgacgacaacaacaa 29848909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 13763617 - 13763687
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||| ||||    
T  13763617 aacaataatgttcttacttctttaactttagcaacacttactaatttaaccaacaacgacgacaacaacaa 13763687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 279
Target Start/End: Complemental strand, 28290771 - 28290701
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||| ||||    
T  28290771 aacaataatgttcttacttctttaactttagtaacgcttgctaattcaaccaacaacgacgacaacaacaa 28290701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 279
Target Start/End: Complemental strand, 16133929 - 16133862
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||    
T  16133929 aataatgttcctacttctttaactttagtaacacttattaattcaaccaacaacgacgacaacaacaa 16133862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 279
Target Start/End: Complemental strand, 29417373 - 29417306
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||    
T  29417373 aataatattcttacttctttaattttagtaacacttactaattcaaccaacaacgacgacaacaacaa 29417306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 212 - 279
Target Start/End: Complemental strand, 19444605 - 19444538
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||    
T  19444605 aataatcttcctacttctttaactttagtaacacttactaattcaaccaacaacaacgacaacaacaa 19444538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 340 - 384
Target Start/End: Complemental strand, 14582181 - 14582137
Alignment:
Q  340 catcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||    
T  14582181 catcaattaaatctatcaccctatcataataataattcatcaata 14582137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 340 - 382
Target Start/End: Complemental strand, 14616595 - 14616553
Alignment:
Q  340 catcaattgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  14616595 catcaattgaatctaacaccctatcataataataattcatcaa 14616553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 270
Target Start/End: Complemental strand, 23621683 - 23621625
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    |||||||||| |||||||| || |||| |||||||||||||| ||| ||||||||||||    
T  23621683 aataatgttcatacttcttcaattttaataacacttactaatccaatcaacaacgacga 23621625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 328
Target Start/End: Original strand, 25395873 - 25395922
Alignment:
Q  279 attatccaatatatgtatatatttcataatcaacaatatcatcaataata 328  Q
    |||||||||||||  ||||||| ||||||||||||| |||||||||||||    
T  25395873 attatccaatatacatatatatctcataatcaacaacatcatcaataata 25395922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 2288620 - 2288561
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    ||||||||| ||| |||||||| | |||||| |||||||||||| ||||||||| |||||    
T  2288620 aacaataatattcatacttcttcatctttagaaacacttactaaatcaaccaacgacgac 2288561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 270
Target Start/End: Complemental strand, 8717496 - 8717439
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    |||||| ||| |||||||| || |||| |||||||||||||||||||||||||| ||||    
T  8717496 aataatattcatacttcttcaa-tttaataacacttactaattcaaccaacaacaacga 8717439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 384
Target Start/End: Original strand, 17413840 - 17413885
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| ||||||  |||||||||||||| ||||||    
T  17413840 tcatcaattgaatctaacaccctaacataataataattcctcaata 17413885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Original strand, 22346441 - 22346478
Alignment:
Q  285 caatatatgtatatatttcataatcaacaatatcatca 322  Q
    |||||||  |||||||||||||||||||||||||||||    
T  22346441 caatatacatatatatttcataatcaacaatatcatca 22346478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 382
Target Start/End: Complemental strand, 8760751 - 8760715
Alignment:
Q  346 ttgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  8760751 ttgaatctaacaccctatcataataataattcatcaa 8760715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 382
Target Start/End: Original strand, 14724222 - 14724258
Alignment:
Q  346 ttgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  14724222 ttgaatctaacaccctatcataataataattcatcaa 14724258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 277
Target Start/End: Original strand, 15538629 - 15538697
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactac 277  Q
    ||||||||| ||| |||||||| | |||||  |||||||||||| ||||||||| ||||| | ||||||    
T  15538629 aacaataatattcatacttcttcatctttaaaaacacttactaaatcaaccaacgacgacaacaactac 15538697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 25749581 - 25749625
Alignment:
Q  278 aattatccaatatatgtatatatttcataatcaacaatatcatca 322  Q
    |||||| |||||||  ||||||||||||||||||||| |||||||    
T  25749581 aattattcaatatacatatatatttcataatcaacaacatcatca 25749625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 207 - 384
Target Start/End: Complemental strand, 3345 - 3168
Alignment:
Q  207 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcata 306  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3345 ttaacaataatgttcttacttcttaatctttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatatttcata 3246  T
Q  307 atcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||||||||||||||||| ||| |||||| |||||  |||||||||||  ||||||||||||||||    
T  3245 atcaacaatatcatcaataatagatatctaactcttcaatttaatcttacaccctgtcatcgtaataattcatcaata 3168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 267 - 384
Target Start/End: Original strand, 109934 - 110051
Alignment:
Q  267 acgataactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcat 366  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||    
T  109934 acgacaactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctaactcatcaattaaatctaacaccctgtcat 110033  T
Q  367 aataataattcatcaata 384  Q
    ||||||||||||||||||    
T  110034 aataataattcatcaata 110051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 109803 - 109873
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||    
T  109803 aacaataatgttcttacttctttaactttagtaacacttgctaattcaaccaacaacgacgacaacaacaa 109873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 272 - 384
Target Start/End: Complemental strand, 37248 - 37136
Alignment:
Q  272 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataa 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||| |||||||||    
T  37248 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctaactcatcaattaaatctaacaccctatcataataa 37149  T
Q  372 taattcatcaata 384  Q
    |||||||||||||    
T  37148 taattcatcaata 37136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 279
Target Start/End: Complemental strand, 37453 - 37383
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||| ||||    
T  37453 aacaataatgttcttacttctttaactttagtaacacttgttaattcaaccaacaacgacgacaacaacaa 37383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 1e-47; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 272 - 384
Target Start/End: Complemental strand, 8729443 - 8729331
Alignment:
Q  272 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataa 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||| ||||||||||||||||    
T  8729443 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctaattcatcaattaaatctaacaccctgtcataataa 8729344  T
Q  372 taattcatcaata 384  Q
    |||||||||||||    
T  8729343 taattcatcaata 8729331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 267 - 384
Target Start/End: Complemental strand, 27942609 - 27942492
Alignment:
Q  267 acgataactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcat 366  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||| |||||||||||    
T  27942609 acgacaactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctaattcatcaattaaatctaacaccctgtcat 27942510  T
Q  367 aataataattcatcaata 384  Q
    | ||||||||||||||||    
T  27942509 attaataattcatcaata 27942492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 272 - 384
Target Start/End: Original strand, 44476013 - 44476125
Alignment:
Q  272 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataa 371  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |  ||||||||| |||||| ||||||||||||||||    
T  44476013 aactacaattatccaatatatgtatatatttcatgatcaacaatatcatcaataatagatatccaattcatcaattaaatctaacaccctgtcataataa 44476112  T
Q  372 taattcatcaata 384  Q
    |||||||||||||    
T  44476113 taattcatcaata 44476125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 272 - 384
Target Start/End: Original strand, 44479275 - 44479387
Alignment:
Q  272 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataa 371  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |  ||||||||| |||||| ||||||||||||||||    
T  44479275 aactacaattatccaatatatgtatatatttcatgatcaacaatatcatcaataatagatatccaattcatcaattaaatctaacaccctgtcataataa 44479374  T
Q  372 taattcatcaata 384  Q
    |||||||||||||    
T  44479375 taattcatcaata 44479387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 20453899 - 20453969
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||    
T  20453899 aacaataatgttcttacttctttaactttagtagcacttactaattcaaccaacaacgacgaaaacaacaa 20453969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 279
Target Start/End: Complemental strand, 21862115 - 21862045
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  21862115 aacaataatgttcttacttctttccctttagtaacacttactaattcaaccaacaacgacgacaacaacaa 21862045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 44475901 - 44475959
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacga 267  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  44475901 aacaataatgttcttacttctttaactttagtaacacttgctaattcaaccaacaacga 44475959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 44479163 - 44479221
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacga 267  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  44479163 aacaataatgttcttacttctttaactttagtaacacttgctaattcaaccaacaacga 44479221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 8729530 - 8729469
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  8729530 aacaataatattcttacttctttaactttagtaacacttgctaattcaatcaacaacgacga 8729469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 20459521 - 20459579
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacga 267  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||    
T  20459521 aacaataatgttgttacttctttaactttagtaacacttactaattcaagaaacaacga 20459579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 43111685 - 43111755
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    ||||||||||||| |||||||| ||||| | ||||||||||||||||||||||||||||||| ||| ||||    
T  43111685 aacaataatgttcatacttcttcaacttaaataacacttactaattcaaccaacaacgacgacaacaacaa 43111755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 44431311 - 44431372
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    |||| |||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  44431311 aacattaatattcatacttcttcaactttagtaacacttactaattcaaccaacaacgacga 44431372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 32949394 - 32949452
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacga 267  Q
    |||||||||||||  ||||||| ||||||| ||||||||||||||||||||||||||||    
T  32949394 aacaataatgttcacacttcttcaactttaataacacttactaattcaaccaacaacga 32949452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 19881557 - 19881618
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    ||||||||| |||  ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  19881557 aacaataatattcacacttcttcaactttaataacacttactaattcaaccaacaacgacga 19881618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 38186390 - 38186330
Alignment:
Q  219 ttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||||||| |||||||| |||||||||||||||||||||||||| ||||| ||| ||||    
T  38186390 ttcttacttcattaactttggtaacacttactaattcaaccaacaatgacgacaacaacaa 38186330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 28853317 - 28853376
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    ||||||||| ||| |||||||| |||||||||||| |||||||| |||||||||||||||    
T  28853317 aacaataatattcatacttcttcaactttagtaactcttactaaatcaaccaacaacgac 28853376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 340 - 382
Target Start/End: Complemental strand, 21322585 - 21322543
Alignment:
Q  340 catcaattgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  21322585 catcaattgaatctaacaccctatcataataataattcatcaa 21322543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 340 - 382
Target Start/End: Complemental strand, 21327173 - 21327131
Alignment:
Q  340 catcaattgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  21327173 catcaattgaatctaacaccctatcataataataattcatcaa 21327131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 266
Target Start/End: Complemental strand, 365406 - 365349
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacg 266  Q
    ||||||||||||| || ||||| ||||||| || ||||||||||| ||||||||||||    
T  365406 aacaataatgttcatatttcttaaactttaatagcacttactaatccaaccaacaacg 365349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 19988521 - 19988476
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| |||||| ||||||||||||||| ||||||    
T  19988521 tcatcaattgaatctaacaccctatcataataataattcttcaata 19988476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 21300506 - 21300461
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||    
T  21300506 tcatcaattgaatctaacaccctaacataataataattcatcaata 21300461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 6609000 - 6608941
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    ||||||||| ||| ||||||||  |||||| |||| |||||||| |||||||||||||||    
T  6609000 aacaataatattcatacttcttcgactttaataactcttactaaatcaaccaacaacgac 6608941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 7301899 - 7301840
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    ||||| ||| ||| |||||||| ||||||| |||| |||||||| |||||||||||||||    
T  7301899 aacaaaaatattcatacttcttcaactttaataactcttactaaatcaaccaacaacgac 7301840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 270
Target Start/End: Complemental strand, 15005147 - 15005088
Alignment:
Q  211 caataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    ||||||||||| |||||||| || |||| |||||||||||||| ||| ||||||| ||||    
T  15005147 caataatgttcatacttcttcaattttaataacacttactaatccaatcaacaacaacga 15005088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 45135686 - 45135627
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    ||||||||| ||| ||||||||  |||||| |||| |||||||| |||||||||||||||    
T  45135686 aacaataatattcatacttcttcgactttaataactcttactaaatcaaccaacaacgac 45135627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 270
Target Start/End: Complemental strand, 24708476 - 24708418
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    |||||| ||| |||||||| || |||| |||||||||||||| ||| ||||||||||||    
T  24708476 aataatattcatacttcttcaattttaataacacttactaatccaatcaacaacgacga 24708418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 382
Target Start/End: Complemental strand, 20974347 - 20974311
Alignment:
Q  346 ttgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  20974347 ttgaatctaacaccctatcataataataattcatcaa 20974311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 382
Target Start/End: Complemental strand, 22176219 - 22176183
Alignment:
Q  346 ttgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  22176219 ttgaatctaacaccctatcataataataattcatcaa 22176183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 382
Target Start/End: Complemental strand, 41009776 - 41009740
Alignment:
Q  346 ttgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  41009776 ttgaatctaacaccctatcataataataattcatcaa 41009740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 1e-47; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 272 - 384
Target Start/End: Original strand, 16371283 - 16371395
Alignment:
Q  272 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataa 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||| ||||||||||||||||    
T  16371283 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctaattcatcaattaaatctaacaccctgtcataataa 16371382  T
Q  372 taattcatcaata 384  Q
    |||||||||||||    
T  16371383 taattcatcaata 16371395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 272 - 384
Target Start/End: Complemental strand, 20438962 - 20438850
Alignment:
Q  272 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataa 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||| |||||| ||| ||||||||||||    
T  20438962 aactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataatagatatccaattcatcaattaaatctaacactctgtcataataa 20438863  T
Q  372 taattcatcaata 384  Q
    |||||||||||||    
T  20438862 taattcatcaata 20438850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 19209253 - 19209323
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  19209253 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgacaacaacaa 19209323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 28311850 - 28311920
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  28311850 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgacaacaacaa 28311920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 212 - 279
Target Start/End: Complemental strand, 13529171 - 13529104
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  13529171 aataatgttcctacttctttaactttagtaacacttactaattcaaccaacaacgacgacaacaacaa 13529104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 16371127 - 16371186
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16371127 aacaataatgttcttacttctttaactttagtaacacttgctaattcaaccaacaacgac 16371186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 20439073 - 20439012
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  20439073 aacaataatgttctaacttctttaactttagtaacacttgctaattcaaccaacaacgacga 20439012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 279
Target Start/End: Original strand, 29534179 - 29534246
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||    
T  29534179 aataatattcttacttctttaactttagtaacacttactaattaaaccaacaacgacgacaacaacaa 29534246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 317 - 384
Target Start/End: Original strand, 29534763 - 29534830
Alignment:
Q  317 tcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    ||||||||||||||||||||  ||||||||| |||||| |||||||||||||||||||||||||||||    
T  29534763 tcatcaataatagatatctaattcatcaattaaatctaacaccctgtcataataataattcatcaata 29534830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 317 - 384
Target Start/End: Original strand, 32649926 - 32649993
Alignment:
Q  317 tcatcaataatagatatctagctcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    ||||||||||||||||||||  ||||||||| |||||| |||||||||||||||||||||||||||||    
T  32649926 tcatcaataatagatatctaattcatcaattaaatctaacaccctgtcataataataattcatcaata 32649993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 212 - 279
Target Start/End: Original strand, 32649529 - 32649596
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||| ||| ||||    
T  32649529 aataatattcttaattctttaattttagtaacacttactaattcaaccaacaacgacgacaacaacaa 32649596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 16400393 - 16400463
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||||||||||| ||||||| ||||||| || |||||||||||||||||||||||||||| ||| ||||    
T  16400393 aacaataatgttctcacttcttcaactttaatagcacttactaattcaaccaacaacgacgacaacaacaa 16400463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 28205016 - 28204955
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    ||||||||||||| |||||||| || |||| |||||||||||||| ||||||||||||||||    
T  28205016 aacaataatgttcatacttcttcaaatttaataacacttactaatccaaccaacaacgacga 28204955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 18251856 - 18251911
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaa 264  Q
    ||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||||    
T  18251856 aacaataatgttcatacttcttcaactttaataacacttattaattcaaccaacaa 18251911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 18269859 - 18269914
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaa 264  Q
    ||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||||    
T  18269859 aacaataatgttcatacttcttcaactttaataacacttattaattcaaccaacaa 18269914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 18274537 - 18274592
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaa 264  Q
    ||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||||    
T  18274537 aacaataatgttcatacttcttcaactttaataacacttattaattcaaccaacaa 18274592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 20578831 - 20578890
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    ||||||||| ||| |||||||| ||||||| |||| |||||||| |||||||||||||||    
T  20578831 aacaataatattcatacttcttcaactttaataactcttactaaatcaaccaacaacgac 20578890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 20586524 - 20586583
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    ||||||||| ||| |||||||| ||||||| |||| |||||||| |||||||||||||||    
T  20586524 aacaataatattcatacttcttcaactttaataactcttactaaatcaaccaacaacgac 20586583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 20900680 - 20900735
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaa 264  Q
    ||||||||||||| ||| |||| ||||||| ||||||||| |||||||||||||||    
T  20900680 aacaataatgttcatacctcttcaactttaataacacttattaattcaaccaacaa 20900735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 340 - 382
Target Start/End: Complemental strand, 20824676 - 20824634
Alignment:
Q  340 catcaattgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  20824676 catcaattgaatctaacaccctatcataataataattcatcaa 20824634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 270
Target Start/End: Complemental strand, 21181870 - 21181812
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    ||||||||||  ||||||| ||||||| |||||||||||| |||||||||||| |||||    
T  21181870 aataatgttcaaacttcttcaactttaataacacttactatttcaaccaacaatgacga 21181812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 16397674 - 16397625
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaac 258  Q
    ||||||||||||| |||||||| ||||||| || ||||||||||||||||    
T  16397674 aacaataatgttcatacttcttcaactttaatagcacttactaattcaac 16397625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 293531 - 293590
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    |||| |||| ||| |||||||| ||||||| ||||||||||||| ||||||||| |||||    
T  293531 aacattaatattcatacttcttcaactttaataacacttactaaatcaaccaacgacgac 293590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 341 - 384
Target Start/End: Complemental strand, 16883870 - 16883827
Alignment:
Q  341 atcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||    
T  16883870 atcaattgaatctaacaccctatcataataataattcatgaata 16883827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 340 - 382
Target Start/End: Complemental strand, 19778784 - 19778742
Alignment:
Q  340 catcaattgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||||||||| |||||| |||||| |||||||||||||    
T  19778784 catcaattgaatctaacaccctatcataaaaataattcatcaa 19778742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 340 - 382
Target Start/End: Complemental strand, 20838495 - 20838453
Alignment:
Q  340 catcaattgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||||||||| ||| || ||||||||||||||||||||    
T  20838495 catcaattgaatctaacactctatcataataataattcatcaa 20838453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 268
Target Start/End: Original strand, 45306662 - 45306720
Alignment:
Q  210 acaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    |||||||| ||  |||||||| ||||||| |||| |||||||| |||||||||||||||    
T  45306662 acaataatatttatacttcttcaactttaataactcttactaaatcaaccaacaacgac 45306720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 11141337 - 11141292
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| ||||||  |||||||| ||||||||||||    
T  11141337 tcatcaattgaatctaacaccctaacataataacaattcatcaata 11141292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 19667066 - 19667021
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| ||||||  |||||| ||||||||||||||    
T  19667066 tcatcaattgaatctaacaccctaacataattataattcatcaata 19667021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 20942188 - 20942143
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| |||||| |||||| || ||||||||||||    
T  20942188 tcatcaattgaatctaacaccctatcataaaaacaattcatcaata 20942143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 207 - 302
Target Start/End: Original strand, 429 - 524
Alignment:
Q  207 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaattatccaatatatgtatatattt 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  429 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgaaaactacaattatccaatatatgtatatattt 524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 209 - 279
Target Start/End: Complemental strand, 10651 - 10581
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10651 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataacaacaa 10581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 278 - 326
Target Start/End: Complemental strand, 10560 - 10512
Alignment:
Q  278 aattatccaatatatgtatatatttcataatcaacaatatcatcaataa 326  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10560 aattatccaatatatgtatatatttcataatcaacaacatcatcaataa 10512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 20968 - 21038
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  20968 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgacaacaacaa 21038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 2406 - 2476
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||    
T  2406 aacaataatgttcttacttctttaactttagaaacacttactaattcaaccaacaacgacgacaacaacaa 2476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 4489 - 4428
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4489 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacaacga 4428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 223934 - 223874
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacg 269  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  223934 aacaataatgttcttacttctttaactttagtaactcttactaattcaaccaacaacgacg 223874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 212 - 270
Target Start/End: Complemental strand, 41593 - 41535
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41593 aataatgttcctacttctttaactttagtaacacttactaattcaaccaacaacgacga 41535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 212 - 270
Target Start/End: Original strand, 145780 - 145838
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  145780 aataatattcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 145838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 267
Target Start/End: Complemental strand, 942 - 887
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacga 267  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  942 aataattttcttacttctttaactttagtaacacttactaattcaaccaacaacga 887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 1558 - 1612
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaaca 263  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1558 aacaataatgttcttacttctttaactttagtaacacttgctaattcaaccaaca 1612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 267 - 326
Target Start/End: Original strand, 1758 - 1817
Alignment:
Q  267 acgataactacaattatccaatatatgtatatatttcataatcaacaatatcatcaataa 326  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  1758 acgacaacaacaattatccaatatatgtatatatttcataatcaacaacatcatcaataa 1817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 214 - 279
Target Start/End: Original strand, 13666 - 13731
Alignment:
Q  214 taatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  13666 taatgttcatacttcttcaactttagtaacacttactaattcaaccaacaacgacgaaaaccacaa 13731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 214 - 279
Target Start/End: Original strand, 11661 - 11726
Alignment:
Q  214 taatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  11661 taatgttcatacttcttcaactttagtaacacttactaattcaaccaacaacgacgaaaaccacaa 11726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 50454 - 50515
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    |||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||    
T  50454 aacaataatgttcacacttcttcaactttagtaacacttactaattcaaccaacaacgacga 50515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 279
Target Start/End: Complemental strand, 2208 - 2138
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    ||||||||||||| || ||||| ||||||| ||||||||||||||||||||||||||||||| ||| ||||    
T  2208 aacaataatgttcataattcttcaactttaataacacttactaattcaaccaacaacgacgacaacaacaa 2138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 137279 - 137349
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||| |||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  137279 aacattaatattcatacttcttcaactttagtaacacttactaattcaaccaacaacgacgacaaccacaa 137349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 35323 - 35262
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    ||||||||||||| |||||||| ||||||| |||||||||||||| ||||||||||||||||    
T  35323 aacaataatgttcatacttcttcaactttaataacacttactaatccaaccaacaacgacga 35262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 3752 - 3800
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaacca 260  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3752 aataatgttcctacttctttaactttagtaacacttactaattcaacca 3800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 214 - 279
Target Start/End: Original strand, 6498 - 6563
Alignment:
Q  214 taatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    |||| ||| |||||||  ||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  6498 taatattcatacttctacaactttagtaacacttactaattcaaccaacaacgacgacaaccacaa 6563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 279 - 326
Target Start/End: Complemental strand, 16348 - 16301
Alignment:
Q  279 attatccaatatatgtatatatttcataatcaacaatatcatcaataa 326  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  16348 attatccaatatatgtatatatttcataatcaacaacttcatcaataa 16301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 59012 - 59058
Alignment:
Q  224 acttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  59012 acttcttcaactttaataacacttactaattcaaccaacaacgacga 59058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 340 - 382
Target Start/End: Original strand, 320915 - 320957
Alignment:
Q  340 catcaattgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||    
T  320915 catcaattgaatctaacaccctatcataataatatttcatcaa 320957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 8360 - 8315
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||    
T  8360 tcatcaattgaatctaacaccctatcataataataattcatcaata 8315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 339 - 384
Target Start/End: Original strand, 95694 - 95739
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||    
T  95694 tcatcaattgaatctaacaccctatcataataataattcatcaata 95739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 10316 - 10363
Alignment:
Q  232 aactttagtaacacttactaattcaaccaacaacgacgataactacaa 279  Q
    ||||||||||| ||||||||||||||||||||||||||| ||| ||||    
T  10316 aactttagtaatacttactaattcaaccaacaacgacgacaaccacaa 10363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 270
Target Start/End: Original strand, 1753 - 1811
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    |||||||||| || ||||| ||||||| || ||||||||||| ||||||||||||||||    
T  1753 aataatgttcatatttcttaaactttaatagcacttactaatccaaccaacaacgacga 1811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 340 - 382
Target Start/End: Original strand, 38195 - 38237
Alignment:
Q  340 catcaattgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  38195 catcaattgaatctaacaccctatcataataataattcatcaa 38237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 340 - 382
Target Start/End: Original strand, 55762 - 55804
Alignment:
Q  340 catcaattgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  55762 catcaattgaatctaacaccctatcataataataattcatcaa 55804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 340 - 382
Target Start/End: Original strand, 258345 - 258387
Alignment:
Q  340 catcaattgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  258345 catcaattgaatctaacaccctatcataataataattcatcaa 258387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 339 - 384
Target Start/End: Original strand, 146852 - 146897
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||    
T  146852 tcatcaattgaatctaacaccctaacataataataattcatcaata 146897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 197770 - 197725
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| |||||| ||||||||| ||||||||||||    
T  197770 tcatcaattgaatctaacaccctatcataataacaattcatcaata 197725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 5291 - 5246
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||    
T  5291 tcatcaattgaatctaacaccctaacataataataattcatcaata 5246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 9162 - 9220
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacga 267  Q
    ||||||||||||| |||| ||| || |||| |||||||||||||| |||| ||||||||    
T  9162 aacaataatgttcatactccttcaattttaataacacttactaatccaactaacaacga 9220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 12136 - 12075
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    ||||||| ||||| |||||||| || |||| |||||||||||||| ||| ||||||||||||    
T  12136 aacaatactgttcatacttcttcaattttaataacacttactaatccaatcaacaacgacga 12075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 14395 - 14334
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    ||||||| ||||| |||||||| || |||| |||||||||||||| ||| ||||||||||||    
T  14395 aacaatactgttcatacttcttcaattttaataacacttactaatccaatcaacaacgacga 14334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 22572 - 22511
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    ||||||||||||| || ||||| ||||||| || || |||||||| ||||||||||||||||    
T  22572 aacaataatgttcatatttcttaaactttaatagcatttactaatccaaccaacaacgacga 22511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 339 - 384
Target Start/End: Original strand, 6441 - 6486
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||    
T  6441 tcatcaattgaatctaacaccctaacataataataattcatcaata 6486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 328
Target Start/End: Original strand, 5800 - 5849
Alignment:
Q  279 attatccaatatatgtatatatttcataatcaacaatatcatcaataata 328  Q
    |||||||||||||  ||||||||||||||||||||| |||||||| ||||    
T  5800 attatccaatatacatatatatttcataatcaacaacatcatcaacaata 5849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 47089 - 47044
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| |||||| ||||||||||||||| ||||||    
T  47089 tcatcaattgaatctaacaccctatcataataataattcttcaata 47044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 51362 - 51317
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| |||||| ||||||||||||||| ||||||    
T  51362 tcatcaattgaatctaacaccctatcataataataattcttcaata 51317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 328
Target Start/End: Original strand, 51004 - 51053
Alignment:
Q  279 attatccaatatatgtatatatttcataatcaacaatatcatcaataata 328  Q
    |||||||||||||  ||||||| ||||||||||||| |||||||||||||    
T  51004 attatccaatatacatatatatctcataatcaacaacatcatcaataata 51053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 47934 - 47987
Alignment:
Q  212 aataatgttcttacttctttaactttagtaacacttactaattcaaccaacaac 265  Q
    |||||| ||||||||||||||||||||  | |||||||||||| ||||||||||    
T  47934 aataatattcttacttctttaactttaaaatcacttactaatttaaccaacaac 47987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 40724 - 40663
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgacga 270  Q
    ||||||||||||| || ||||| ||||||| || |||||||||||  |||||||||||||||    
T  40724 aacaataatgttcatatttcttcaactttaatagcacttactaatctaaccaacaacgacga 40663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 39029 - 38984
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||    
T  39029 tcatcaattgaatctaacaccctaacataataataattcatcaata 38984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 137089 - 137044
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||    
T  137089 tcatcaattgaatctaacaccctaacataataataattcatcaata 137044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 326
Target Start/End: Original strand, 49 - 97
Alignment:
Q  279 attatccaatatatgtatatattt-cataatcaacaatatcatcaataa 326  Q
    ||||||||||||||||||| |||| |||||||||||| |||||||||||    
T  49 attatccaatatatgtataaattttcataatcaacaacatcatcaataa 97  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 384
Target Start/End: Complemental strand, 24121 - 24077
Alignment:
Q  340 catcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    ||||||||||||| | |||||| ||||||||||||||||||||||    
T  24121 catcaattgaatccaacaccctatcataataataattcatcaata 24077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 18496 - 18451
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| |||||| | ||||||| ||||||||||||    
T  18496 tcatcaattgaatctaacaccctatgataataacaattcatcaata 18451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 382
Target Start/End: Original strand, 5361 - 5404
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaa 382  Q
    |||||||||||||||| ||||||  |||||||||||||||||||    
T  5361 tcatcaattgaatctaacaccctaacataataataattcatcaa 5404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 11601 - 11546
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaa 264  Q
    ||||||||| ||| |||||||| ||||||| |||| |||||||| |||||||||||    
T  11601 aacaataatattcatacttcttcaactttaataactcttactaaatcaaccaacaa 11546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 382
Target Start/End: Complemental strand, 4691 - 4648
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaa 382  Q
    |||||||||||||||| ||||||  |||||||||||||||||||    
T  4691 tcatcaattgaatctaacaccctaacataataataattcatcaa 4648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 32531 - 32590
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    ||||||||| ||| ||||||||  |||||| |||| |||||||| |||||||||||||||    
T  32531 aacaataatattcatacttcttcgactttaataactcttactaaatcaaccaacaacgac 32590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 2524 - 2583
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    |||| |||| ||| |||||||| ||||||| ||||||||||||| ||||||||| |||||    
T  2524 aacattaatattcatacttcttcaactttaataacacttactaaatcaaccaacgacgac 2583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 82281 - 82222
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    ||||||||| ||| ||||||||  |||||| |||| |||||||| |||||||||||||||    
T  82281 aacaataatattcatacttcttcgactttaataactcttactaaatcaaccaacaacgac 82222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 6435 - 6376
Alignment:
Q  209 aacaataatgttcttacttctttaactttagtaacacttactaattcaaccaacaacgac 268  Q
    |||||| || ||| |||||||| ||||||| ||||||||||||| ||||||||| |||||    
T  6435 aacaatgatattcatacttcttcaactttaataacacttactaaatcaaccaacgacgac 6376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 340 - 382
Target Start/End: Original strand, 8265 - 8307
Alignment:
Q  340 catcaattgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||||||||| |||||| |||||| |||||||||||||    
T  8265 catcaattgaatctaacaccctatcataaaaataattcatcaa 8307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 340 - 382
Target Start/End: Original strand, 20650 - 20692
Alignment:
Q  340 catcaattgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||||||||| |||||| |||||||||||| |||||||    
T  20650 catcaattgaatctaacaccctatcataataataaatcatcaa 20692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 322 - 376
Target Start/End: Original strand, 19623 - 19677
Alignment:
Q  322 aataatagatatctagctcatcaattgaatctatcaccctgtcataataataatt 376  Q
    ||||||||||||  |  |||||||||||||||| |||||| ||||||||||||||    
T  19623 aataatagatataaaattcatcaattgaatctaacaccctatcataataataatt 19677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 327
Target Start/End: Original strand, 44458 - 44500
Alignment:
Q  285 caatatatgtatatatttcataatcaacaatatcatcaataat 327  Q
    |||||||  |||||||||||||||||||||||||| |||||||    
T  44458 caatatacatatatatttcataatcaacaatatcaacaataat 44500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 346 - 384
Target Start/End: Original strand, 16794 - 16832
Alignment:
Q  346 ttgaatctatcaccctgtcataataataattcatcaata 384  Q
    ||||||||| |||||| ||||||||||||||||||||||    
T  16794 ttgaatctaacaccctatcataataataattcatcaata 16832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 340 - 382
Target Start/End: Original strand, 29398 - 29440
Alignment:
Q  340 catcaattgaatctatcaccctgtcataataataattcatcaa 382  Q
    |||||||| |||||| |||||| ||||||||||||||||||||    
T  29398 catcaattaaatctaacaccctatcataataataattcatcaa 29440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1290 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1290
Description:

Target: scaffold1290; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 327
Target Start/End: Complemental strand, 1576 - 1527
Alignment:
Q  278 aattatccaatatatgtatatatttcataatcaacaatatcatcaataat 327  Q
    |||||| |||||||  ||||||||||||||||||||| |||| |||||||    
T  1576 aattattcaatataaatatatatttcataatcaacaacatcaacaataat 1527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 382
Target Start/End: Complemental strand, 6235 - 6190
Alignment:
Q  338 ctcatcaatt-gaatctatcaccctgtcataataataattcatcaa 382  Q
    |||||||||| ||||||| |||||| ||||||||||||||||||||    
T  6235 ctcatcaatttgaatctaacaccctatcataataataattcatcaa 6190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 2057 - 2012
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||||||||||||| |||||| ||||||||||| ||||| ||||    
T  2057 tcatcaattgaatctaacaccctatcataataatatttcatgaata 2012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 57564 - 57519
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||| ||||||||| ||||||  |||||||||||||||||||||    
T  57564 tcatcagttgaatctaacaccctaacataataataattcatcaata 57519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 323
Target Start/End: Original strand, 177752 - 177797
Alignment:
Q  278 aattatccaatatatgtatatatttcataatcaacaatatcatcaa 323  Q
    |||| |||||||||  ||||||||||||||||||||| ||||||||    
T  177752 aattctccaatatacatatatatttcataatcaacaacatcatcaa 177797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 384
Target Start/End: Original strand, 141069 - 141114
Alignment:
Q  339 tcatcaattgaatctatcaccctgtcataataataattcatcaata 384  Q
    |||||| ||||||||| ||||||  |||||||||||||||||||||    
T  141069 tcatcagttgaatctaacaccctaacataataataattcatcaata 141114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 326
Target Start/End: Complemental strand, 5721 - 5673
Alignment:
Q  278 aattatccaatatatgtatatatttcataatcaacaatatcatcaataa 326  Q
    ||||||||||||||  ||||||||||||||| ||||| |||| ||||||    
T  5721 aattatccaatatacatatatatttcataattaacaacatcaacaataa 5673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 382
Target Start/End: Complemental strand, 13736 - 13700
Alignment:
Q  346 ttgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  13736 ttgaatctaacaccctatcataataataattcatcaa 13700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 326
Target Start/End: Original strand, 9394 - 9442
Alignment:
Q  278 aattatccaatatatgtatatatttcataatcaacaatatcatcaataa 326  Q
    |||||| |||||||  ||||||||||||||| ||||| |||||||||||    
T  9394 aattattcaatatacatatatatttcataattaacaacatcatcaataa 9442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 326
Target Start/End: Original strand, 13467 - 13515
Alignment:
Q  278 aattatccaatatatgtatatatttcataatcaacaatatcatcaataa 326  Q
    |||||| |||||||  ||||||||||||||| ||||| |||||||||||    
T  13467 aattattcaatatacatatatatttcataattaacaacatcatcaataa 13515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 382
Target Start/End: Original strand, 27722 - 27758
Alignment:
Q  346 ttgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  27722 ttgaatctaacaccctatcataataataattcatcaa 27758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 382
Target Start/End: Original strand, 70944 - 70980
Alignment:
Q  346 ttgaatctatcaccctgtcataataataattcatcaa 382  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  70944 ttgaatctaacaccctatcataataataattcatcaa 70980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University