View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21698_high_8 (Length: 342)

Name: NF21698_high_8
Description: NF21698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21698_high_8
NF21698_high_8
[»] scaffold0061 (2 HSPs)
scaffold0061 (1-77)||(68514-68590)
scaffold0061 (271-334)||(68328-68392)
[»] chr8 (30 HSPs)
chr8 (1-77)||(21974142-21974218)
chr8 (1-77)||(21978252-21978328)
chr8 (1-77)||(43250246-43250322)
chr8 (1-75)||(14399053-14399127)
chr8 (1-75)||(21409945-21410019)
chr8 (1-75)||(21804437-21804511)
chr8 (262-334)||(22110936-22111009)
chr8 (262-334)||(43250696-43250769)
chr8 (262-334)||(21973689-21973762)
chr8 (273-334)||(21977780-21977842)
chr8 (1-78)||(23427870-23427945)
chr8 (1-78)||(23913309-23913384)
chr8 (1-78)||(44385793-44385868)
chr8 (1-78)||(21386203-21386278)
chr8 (262-336)||(18863811-18863889)
chr8 (262-336)||(30941271-30941349)
chr8 (35-77)||(21829430-21829472)
chr8 (279-334)||(21829139-21829195)
chr8 (269-315)||(15924297-15924344)
chr8 (35-77)||(22110668-22110710)
chr8 (35-75)||(18864076-18864116)
chr8 (35-75)||(30941536-30941576)
chr8 (268-308)||(20983485-20983525)
chr8 (262-325)||(38550618-38550681)
chr8 (1-31)||(18864109-18864139)
chr8 (1-31)||(21829465-21829495)
chr8 (1-31)||(30941569-30941599)
chr8 (262-295)||(21977839-21977872)
chr8 (262-303)||(38550705-38550746)
chr8 (268-308)||(20983551-20983591)
[»] chr7 (70 HSPs)
chr7 (1-77)||(31769-31845)
chr7 (1-77)||(12706081-12706157)
chr7 (1-77)||(12713584-12713660)
chr7 (1-77)||(12717331-12717407)
chr7 (1-77)||(12722242-12722318)
chr7 (1-77)||(16908468-16908544)
chr7 (1-77)||(18278038-18278114)
chr7 (1-77)||(18282002-18282078)
chr7 (1-75)||(2833442-2833516)
chr7 (1-75)||(15083270-15083344)
chr7 (1-75)||(39721240-39721314)
chr7 (262-334)||(31994-32067)
chr7 (262-334)||(12713809-12713882)
chr7 (262-334)||(12717633-12717706)
chr7 (262-334)||(12722544-12722617)
chr7 (1-78)||(25928330-25928406)
chr7 (1-75)||(2531293-2531367)
chr7 (1-75)||(7520176-7520250)
chr7 (1-78)||(20486786-20486861)
chr7 (1-78)||(10607280-10607355)
chr7 (1-78)||(9752467-9752542)
chr7 (1-78)||(16582465-16582540)
chr7 (1-74)||(18301395-18301466)
chr7 (262-315)||(2833200-2833253)
chr7 (262-315)||(18278264-18278317)
chr7 (262-315)||(18282227-18282280)
chr7 (1-54)||(26291201-26291254)
chr7 (278-334)||(18278344-18278401)
chr7 (262-336)||(45171207-45171285)
chr7 (1-78)||(1859980-1860056)
chr7 (1-78)||(13919371-13919447)
chr7 (35-77)||(72341-72383)
chr7 (35-77)||(76450-76492)
chr7 (262-315)||(2531050-2531104)
chr7 (277-334)||(18282306-18282364)
chr7 (262-315)||(26291374-26291428)
chr7 (279-334)||(71970-72026)
chr7 (279-334)||(76079-76135)
chr7 (271-334)||(12705815-12705879)
chr7 (1-48)||(39268301-39268348)
chr7 (277-314)||(18282274-18282311)
chr7 (1-45)||(11660326-11660370)
chr7 (1-45)||(13891674-13891718)
chr7 (35-75)||(45171472-45171512)
chr7 (277-314)||(18278311-18278348)
chr7 (268-308)||(6170760-6170800)
chr7 (1-41)||(13892057-13892097)
chr7 (262-321)||(15112352-15112412)
chr7 (262-321)||(15115924-15115984)
chr7 (270-306)||(18424601-18424637)
chr7 (270-306)||(18424714-18424750)
chr7 (262-310)||(25928194-25928242)
chr7 (262-308)||(6170826-6170872)
chr7 (262-308)||(9390377-9390423)
chr7 (262-315)||(16582665-16582719)
chr7 (1-43)||(18424279-18424321)
chr7 (1-31)||(45171505-45171535)
chr7 (277-310)||(2833173-2833206)
chr7 (262-303)||(8467864-8467905)
chr7 (262-303)||(10502048-10502089)
chr7 (270-307)||(10607142-10607179)
chr7 (262-303)||(14270754-14270795)
chr7 (262-303)||(17231859-17231900)
chr7 (262-303)||(17231924-17231965)
chr7 (262-303)||(17231989-17232030)
chr7 (262-303)||(17232054-17232095)
chr7 (1-45)||(14420831-14420875)
chr7 (1-45)||(16005048-16005092)
chr7 (1-45)||(18606382-18606426)
chr7 (1-45)||(18871341-18871385)
[»] chr6 (44 HSPs)
chr6 (1-77)||(8242456-8242532)
chr6 (1-77)||(11565445-11565521)
chr6 (1-77)||(12620292-12620368)
chr6 (1-77)||(22861799-22861875)
chr6 (1-77)||(23988347-23988423)
chr6 (1-78)||(11716898-11716975)
chr6 (1-75)||(27555583-27555657)
chr6 (262-334)||(8242759-8242832)
chr6 (262-334)||(11565747-11565820)
chr6 (262-334)||(12619990-12620063)
chr6 (262-334)||(23988845-23988918)
chr6 (262-333)||(22948002-22948074)
chr6 (262-333)||(22951958-22952030)
chr6 (262-333)||(23870446-23870518)
chr6 (262-333)||(23874402-23874474)
chr6 (1-75)||(22075347-22075425)
chr6 (3-78)||(2076332-2076405)
chr6 (1-78)||(18918540-18918615)
chr6 (1-54)||(23400722-23400775)
chr6 (262-336)||(19869481-19869559)
chr6 (262-336)||(23393935-23394013)
chr6 (262-336)||(23413843-23413921)
chr6 (262-315)||(1643552-1643606)
chr6 (1-78)||(14470925-14471000)
chr6 (271-336)||(14471234-14471300)
chr6 (35-77)||(22947734-22947776)
chr6 (35-77)||(22951690-22951732)
chr6 (35-77)||(23870178-23870220)
chr6 (35-77)||(23874134-23874176)
chr6 (262-310)||(22075110-22075158)
chr6 (279-334)||(16759139-16759195)
chr6 (35-77)||(16758782-16758824)
chr6 (262-315)||(18918416-18918469)
chr6 (26-78)||(1643321-1643371)
chr6 (1-54)||(18953465-18953518)
chr6 (35-75)||(19869254-19869294)
chr6 (35-75)||(23393708-23393748)
chr6 (35-75)||(23413616-23413656)
chr6 (268-310)||(22075077-22075119)
chr6 (270-306)||(16623154-16623190)
chr6 (262-290)||(18953242-18953270)
chr6 (1-45)||(23538025-23538069)
chr6 (1-45)||(27222876-27222920)
chr6 (3-43)||(31479455-31479495)
[»] chr5 (40 HSPs)
chr5 (1-77)||(19474131-19474207)
chr5 (1-77)||(20294558-20294634)
chr5 (1-75)||(18354841-18354915)
chr5 (2-68)||(24768530-24768596)
chr5 (262-336)||(19473830-19473905)
chr5 (262-334)||(20294786-20294859)
chr5 (1-78)||(20912212-20912287)
chr5 (1-78)||(15238077-15238152)
chr5 (1-78)||(22108409-22108484)
chr5 (262-315)||(18355055-18355108)
chr5 (271-336)||(11226427-11226493)
chr5 (262-315)||(24768237-24768290)
chr5 (1-78)||(22120551-22120626)
chr5 (1-78)||(40727359-40727434)
chr5 (262-336)||(11219849-11219927)
chr5 (262-336)||(11224435-11224513)
chr5 (262-336)||(11230247-11230325)
chr5 (282-336)||(18355179-18355234)
chr5 (282-334)||(40727069-40727122)
chr5 (262-330)||(11228257-11228329)
chr5 (35-75)||(11219622-11219662)
chr5 (35-75)||(11224208-11224248)
chr5 (35-75)||(11226224-11226264)
chr5 (35-75)||(11228030-11228070)
chr5 (35-75)||(11230020-11230060)
chr5 (262-302)||(20912104-20912144)
chr5 (270-310)||(22108196-22108236)
chr5 (262-308)||(5889817-5889863)
chr5 (1-43)||(10751861-10751903)
chr5 (270-315)||(22120335-22120381)
chr5 (276-308)||(5889886-5889918)
chr5 (1-45)||(19510506-19510550)
chr5 (263-307)||(20912132-20912176)
chr5 (1-45)||(22339056-22339100)
chr5 (1-45)||(23113393-23113437)
chr5 (1-45)||(28372072-28372116)
chr5 (1-45)||(37599999-37600043)
chr5 (1-45)||(38146409-38146453)
chr5 (6-42)||(39362991-39363027)
chr5 (1-45)||(41878642-41878686)
[»] chr4 (43 HSPs)
chr4 (1-77)||(9555113-9555189)
chr4 (1-77)||(14758950-14759026)
chr4 (1-77)||(14955718-14955794)
chr4 (1-77)||(17807098-17807174)
chr4 (1-77)||(25688486-25688562)
chr4 (1-77)||(4562732-4562808)
chr4 (1-77)||(5758414-5758490)
chr4 (1-77)||(33740880-33740956)
chr4 (1-75)||(20158408-20158482)
chr4 (1-75)||(20161084-20161158)
chr4 (1-75)||(20163859-20163933)
chr4 (1-77)||(12486315-12486388)
chr4 (262-334)||(4562433-4562506)
chr4 (262-334)||(9555415-9555488)
chr4 (262-334)||(14758574-14758647)
chr4 (262-334)||(14955339-14955412)
chr4 (262-334)||(33741185-33741258)
chr4 (262-333)||(25688788-25688860)
chr4 (1-75)||(10711869-10711943)
chr4 (1-75)||(10925639-10925713)
chr4 (1-78)||(12422987-12423062)
chr4 (1-78)||(17052405-17052480)
chr4 (1-78)||(23996926-23997001)
chr4 (262-334)||(5757958-5758031)
chr4 (1-74)||(631711-631782)
chr4 (1-78)||(22634886-22634961)
chr4 (1-78)||(27532796-27532871)
chr4 (262-336)||(12486537-12486615)
chr4 (1-48)||(13813820-13813867)
chr4 (1-48)||(13818308-13818355)
chr4 (262-315)||(27532942-27532995)
chr4 (1-45)||(24048375-24048419)
chr4 (262-336)||(631561-631636)
chr4 (262-308)||(15189737-15189783)
chr4 (262-308)||(15189770-15189816)
chr4 (270-306)||(15223912-15223948)
chr4 (1-43)||(15223590-15223632)
chr4 (263-308)||(12423189-12423234)
chr4 (262-303)||(15481998-15482039)
chr4 (262-303)||(19857007-19857048)
chr4 (1-45)||(15533263-15533307)
chr4 (1-45)||(18211648-18211692)
chr4 (1-45)||(49549073-49549117)
[»] chr3 (71 HSPs)
chr3 (1-77)||(7108282-7108358)
chr3 (1-77)||(7112217-7112293)
chr3 (1-77)||(11068657-11068733)
chr3 (1-77)||(22320173-22320249)
chr3 (1-77)||(22335228-22335304)
chr3 (1-77)||(55021420-55021496)
chr3 (1-77)||(11167052-11167128)
chr3 (1-77)||(14497991-14498067)
chr3 (1-77)||(15616221-15616297)
chr3 (1-77)||(28948505-28948581)
chr3 (1-75)||(5219891-5219965)
chr3 (1-75)||(11853750-11853824)
chr3 (1-75)||(37440641-37440715)
chr3 (1-75)||(11301626-11301700)
chr3 (1-75)||(14664469-14664543)
chr3 (1-75)||(14667633-14667707)
chr3 (262-336)||(11069036-11069111)
chr3 (262-334)||(7108584-7108657)
chr3 (262-334)||(7112519-7112592)
chr3 (262-334)||(14498293-14498366)
chr3 (262-334)||(15616523-15616596)
chr3 (262-334)||(22320552-22320625)
chr3 (262-334)||(22335607-22335680)
chr3 (262-334)||(28948730-28948803)
chr3 (262-334)||(30064735-30064808)
chr3 (262-334)||(55021873-55021946)
chr3 (1-78)||(16795547-16795622)
chr3 (262-334)||(11166676-11166749)
chr3 (1-76)||(12853325-12853398)
chr3 (262-336)||(14067672-14067747)
chr3 (1-54)||(18933337-18933390)
chr3 (1-54)||(30064429-30064482)
chr3 (262-310)||(11301389-11301437)
chr3 (1-74)||(4590124-4590195)
chr3 (3-78)||(14068022-14068095)
chr3 (262-310)||(14664735-14664783)
chr3 (262-310)||(14667899-14667947)
chr3 (1-78)||(14670070-14670142)
chr3 (262-336)||(15963791-15963869)
chr3 (262-336)||(15967715-15967793)
chr3 (262-336)||(15971639-15971717)
chr3 (1-78)||(15463922-15463998)
chr3 (35-77)||(4112607-4112649)
chr3 (1-78)||(17318469-17318544)
chr3 (35-76)||(4108759-4108800)
chr3 (279-334)||(4108387-4108443)
chr3 (279-334)||(4112239-4112295)
chr3 (1-51)||(12337300-12337348)
chr3 (262-306)||(4589893-4589936)
chr3 (35-75)||(15963564-15963604)
chr3 (35-75)||(15967488-15967528)
chr3 (35-75)||(15971412-15971452)
chr3 (262-310)||(14067732-14067777)
chr3 (262-308)||(18440583-18440629)
chr3 (262-308)||(19485657-19485703)
chr3 (262-308)||(49390328-49390374)
chr3 (1-42)||(10834935-10834976)
chr3 (1-78)||(14681594-14681664)
chr3 (1-45)||(8928858-8928902)
chr3 (1-45)||(13435862-13435906)
chr3 (270-306)||(16751580-16751616)
chr3 (270-306)||(19774548-19774584)
chr3 (262-308)||(18440505-18440551)
chr3 (262-308)||(19485579-19485625)
chr3 (1-42)||(16751895-16751936)
chr3 (1-45)||(3802014-3802058)
chr3 (1-45)||(14764786-14764830)
chr3 (1-45)||(20249840-20249884)
chr3 (262-290)||(27410959-27410987)
chr3 (1-45)||(29545929-29545973)
chr3 (1-45)||(54519641-54519685)
[»] chr2 (29 HSPs)
chr2 (1-77)||(24630006-24630082)
chr2 (1-77)||(24645195-24645271)
chr2 (1-77)||(24647971-24648047)
chr2 (1-77)||(27600415-27600491)
chr2 (1-77)||(30346616-30346692)
chr2 (1-77)||(10103255-10103331)
chr2 (1-77)||(12902565-12902641)
chr2 (1-77)||(27380952-27381028)
chr2 (1-77)||(27384922-27384998)
chr2 (1-75)||(31343961-31344035)
chr2 (262-334)||(10102956-10103029)
chr2 (262-334)||(24629627-24629700)
chr2 (262-334)||(27600717-27600790)
chr2 (262-334)||(30346163-30346236)
chr2 (262-334)||(27384546-27384619)
chr2 (264-334)||(27380500-27380571)
chr2 (1-78)||(9784038-9784113)
chr2 (262-315)||(31344221-31344274)
chr2 (262-336)||(41532149-41532227)
chr2 (262-336)||(1282318-1282396)
chr2 (271-334)||(24648249-24648313)
chr2 (35-75)||(41532414-41532454)
chr2 (1-31)||(41532447-41532477)
chr2 (1-45)||(6481828-6481872)
chr2 (1-45)||(6485295-6485339)
chr2 (1-45)||(19663548-19663592)
chr2 (1-45)||(20260301-20260345)
chr2 (1-45)||(21074498-21074542)
chr2 (1-29)||(24647138-24647166)
[»] chr1 (35 HSPs)
chr1 (1-77)||(1009306-1009382)
chr1 (1-77)||(1926754-1926830)
chr1 (1-77)||(16376774-16376850)
chr1 (1-77)||(20925768-20925844)
chr1 (1-77)||(52634312-52634388)
chr1 (1-75)||(33796077-33796151)
chr1 (262-334)||(1009608-1009681)
chr1 (262-334)||(1926301-1926374)
chr1 (262-334)||(16376552-16376625)
chr1 (262-334)||(20925315-20925388)
chr1 (262-334)||(52634694-52634767)
chr1 (1-78)||(22132058-22132133)
chr1 (262-315)||(33796291-33796344)
chr1 (1-78)||(21406297-21406372)
chr1 (1-78)||(41801238-41801313)
chr1 (1-54)||(20230120-20230173)
chr1 (262-316)||(21406553-21406608)
chr1 (270-336)||(33796436-33796503)
chr1 (262-315)||(20229941-20229995)
chr1 (262-308)||(28195107-28195153)
chr1 (262-308)||(35982340-35982386)
chr1 (262-303)||(21740484-21740525)
chr1 (262-321)||(12271028-12271088)
chr1 (270-306)||(39244891-39244927)
chr1 (270-306)||(39248446-39248482)
chr1 (270-306)||(41389339-41389375)
chr1 (262-310)||(41801091-41801139)
chr1 (1-43)||(39245163-39245205)
chr1 (1-43)||(39248718-39248760)
chr1 (1-43)||(41389657-41389699)
chr1 (262-303)||(20315609-20315650)
chr1 (262-303)||(41306242-41306283)
chr1 (1-45)||(16370969-16371013)
chr1 (268-308)||(21740349-21740389)
chr1 (262-310)||(41801124-41801171)
[»] scaffold0372 (2 HSPs)
scaffold0372 (1-77)||(6279-6355)
scaffold0372 (263-334)||(6167-6239)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-77)||(60283-60360)
[»] scaffold0349 (2 HSPs)
scaffold0349 (1-77)||(11095-11170)
scaffold0349 (262-334)||(11402-11475)
[»] scaffold1852 (1 HSPs)
scaffold1852 (1-75)||(781-855)
[»] scaffold0410 (1 HSPs)
scaffold0410 (1-75)||(14888-14962)
[»] scaffold0166 (2 HSPs)
scaffold0166 (2-68)||(11027-11093)
scaffold0166 (262-315)||(10734-10787)
[»] scaffold0486 (2 HSPs)
scaffold0486 (1-75)||(8621-8695)
scaffold0486 (262-310)||(8885-8933)
[»] scaffold0157 (2 HSPs)
scaffold0157 (1-77)||(34089-34162)
scaffold0157 (262-336)||(33862-33940)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-75)||(11821-11895)
[»] scaffold0293 (2 HSPs)
scaffold0293 (1-78)||(21298-21374)
scaffold0293 (262-310)||(21162-21210)
[»] scaffold0575 (2 HSPs)
scaffold0575 (1-78)||(6920-6995)
scaffold0575 (262-310)||(6842-6889)
[»] scaffold0124 (2 HSPs)
scaffold0124 (1-78)||(25527-25602)
scaffold0124 (263-308)||(25446-25491)
[»] scaffold0525 (2 HSPs)
scaffold0525 (262-334)||(5006-5079)
scaffold0525 (1-78)||(5490-5565)
[»] scaffold0142 (2 HSPs)
scaffold0142 (2-78)||(8699-8773)
scaffold0142 (277-331)||(8445-8500)
[»] scaffold0029 (5 HSPs)
scaffold0029 (262-315)||(79428-79481)
scaffold0029 (277-336)||(79475-79535)
scaffold0029 (1-54)||(62821-62874)
scaffold0029 (262-315)||(62568-62621)
scaffold0029 (262-315)||(66484-66537)
[»] scaffold0327 (3 HSPs)
scaffold0327 (262-310)||(19128-19176)
scaffold0327 (262-310)||(19232-19280)
scaffold0327 (1-78)||(18867-18942)
[»] scaffold0200 (3 HSPs)
scaffold0200 (262-310)||(11061-11109)
scaffold0200 (35-75)||(10834-10874)
scaffold0200 (262-315)||(11094-11148)
[»] scaffold0380 (2 HSPs)
scaffold0380 (262-315)||(955-1009)
scaffold0380 (1-78)||(4018-4093)
[»] scaffold0013 (2 HSPs)
scaffold0013 (1-78)||(74291-74366)
scaffold0013 (276-315)||(74077-74117)
[»] scaffold0141 (3 HSPs)
scaffold0141 (262-336)||(15281-15359)
scaffold0141 (35-75)||(15546-15586)
scaffold0141 (1-31)||(15579-15609)
[»] scaffold0109 (1 HSPs)
scaffold0109 (1-54)||(37179-37232)
[»] scaffold0299 (1 HSPs)
scaffold0299 (1-51)||(5869-5917)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-78)||(37161-37237)
[»] scaffold0080 (2 HSPs)
scaffold0080 (1-45)||(28516-28560)
scaffold0080 (1-45)||(33981-34025)
[»] scaffold0484 (1 HSPs)
scaffold0484 (279-336)||(76-134)
[»] scaffold1873 (1 HSPs)
scaffold1873 (16-78)||(691-752)
[»] scaffold0601 (2 HSPs)
scaffold0601 (270-308)||(8555-8593)
scaffold0601 (262-308)||(8621-8667)
[»] scaffold0278 (1 HSPs)
scaffold0278 (262-303)||(6963-7004)
[»] scaffold0116 (2 HSPs)
scaffold0116 (262-303)||(44439-44480)
scaffold0116 (262-303)||(44504-44545)
[»] scaffold0043 (1 HSPs)
scaffold0043 (262-303)||(9072-9113)
[»] scaffold0001 (1 HSPs)
scaffold0001 (8-45)||(153803-153840)
[»] scaffold1427 (1 HSPs)
scaffold1427 (1-45)||(244-288)
[»] scaffold0842 (1 HSPs)
scaffold0842 (1-45)||(5286-5330)
[»] scaffold0337 (1 HSPs)
scaffold0337 (1-45)||(10812-10856)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-45)||(109645-109689)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-45)||(224133-224177)
[»] scaffold0004 (1 HSPs)
scaffold0004 (268-308)||(362226-362266)


Alignment Details
Target: scaffold0061 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 68590 - 68514
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  68590 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 68514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 68392 - 68328
Alignment:
Q  271 tatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  68392 tataataatataacaacaacatattcatcatcttatgaaaatataatcaacacatactaacacca 68328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 21974218 - 21974142
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21974218 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 21974142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 21978328 - 21978252
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21978328 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 21978252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 43250246 - 43250322
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  43250246 agtacacttaacaactcatagatatcatcatgtaatcatcatcattaataactttaaaacaacacaatataatcatc 43250322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 14399127 - 14399053
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14399127 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14399053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 21409945 - 21410019
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21409945 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 21410019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 21804437 - 21804511
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21804437 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 21804511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 22110936 - 22111009
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22110936 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 22111009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 43250696 - 43250769
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  43250696 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 43250769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 262 - 334
Target Start/End: Complemental strand, 21973762 - 21973689
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  21973762 tcatcttcttgtattaatataacaacaaggtattcatcatcttatgaaaatataatcaacacatactaacacca 21973689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 273 - 334
Target Start/End: Complemental strand, 21977842 - 21977780
Alignment:
Q  273 tattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21977842 tattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 21977780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 23427870 - 23427945
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||  | ||||||||||||||||||||    
T  23427870 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--agacaacacaatataatcatca 23427945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 23913309 - 23913384
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| ||||||||| ||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  23913309 agtacatttaacaacttatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 23913384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 44385868 - 44385793
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  44385868 agtacatttaacaactcatagataacatcatgtaatcatcatcactaacaactt--aaacaacacaatataatcatca 44385793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 21386203 - 21386278
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||||||  |||| |||||||||||||||||    
T  21386203 agtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatcatca 21386278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 336
Target Start/End: Complemental strand, 18863889 - 18863811
Alignment:
Q  262 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  18863889 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 18863811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 336
Target Start/End: Complemental strand, 30941349 - 30941271
Alignment:
Q  262 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  30941349 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 30941271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 77
Target Start/End: Complemental strand, 21829472 - 21829430
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  21829472 atcatcatcactaataactttaaaacaacacaatataatcatc 21829430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 334
Target Start/End: Complemental strand, 21829195 - 21829139
Alignment:
Q  279 tataacaacaacgtattcatcatcttataaaa-tataatcaacacatactaacacca 334  Q
    ||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  21829195 tataataacaacatattcatcatcttataaaaatataatcaacacatactaacacca 21829139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 315
Target Start/End: Complemental strand, 15924344 - 15924297
Alignment:
Q  269 cttatattaatataacaacaacgtattcatcatcttat-aaaatataa 315  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  15924344 cttatattaatataacaacaacgtattcatcatcttatgaaaatataa 15924297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 22110668 - 22110710
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  22110668 atcatcatcactaataactttaaaacaacataatataatcatc 22110710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 18864116 - 18864076
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  18864116 atcatcatcactaataactttaaaacaacacaatgtaatca 18864076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 30941576 - 30941536
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  30941576 atcatcatcactaataactttaaaacaacacaatgtaatca 30941536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 20983525 - 20983485
Alignment:
Q  268 tcttatattaatataacaacaacgtattcatcatcttataa 308  Q
    ||||||| ||||||||||||||| |||||||||||||||||    
T  20983525 tcttataataatataacaacaacatattcatcatcttataa 20983485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 325
Target Start/End: Complemental strand, 38550681 - 38550618
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacata 325  Q
    ||||| ||||||| ||||||||||||||| |||||||||||| || ||||||||| |||||||||    
T  38550681 tcatcatcttataataatataacaacaacatattcatcatctcatcaaaatataa-caacacata 38550618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 18864139 - 18864109
Alignment:
Q  1 agtacacttaacaactcatagatatcatcat 31  Q
    |||||||||||||||||||||||||||||||    
T  18864139 agtacacttaacaactcatagatatcatcat 18864109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 21829495 - 21829465
Alignment:
Q  1 agtacacttaacaactcatagatatcatcat 31  Q
    |||||||||||||||||||||||||||||||    
T  21829495 agtacacttaacaactcatagatatcatcat 21829465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 30941599 - 30941569
Alignment:
Q  1 agtacacttaacaactcatagatatcatcat 31  Q
    |||||||||||||||||||||||||||||||    
T  30941599 agtacacttaacaactcatagatatcatcat 30941569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 295
Target Start/End: Complemental strand, 21977872 - 21977839
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtatt 295  Q
    |||||||||| |||||||||||||||||||||||    
T  21977872 tcatcttcttgtattaatataacaacaacgtatt 21977839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 38550746 - 38550705
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatct 303  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  38550746 tcatcatcttataataatataacaacaacatattcatcatct 38550705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 20983591 - 20983551
Alignment:
Q  268 tcttatattaatataacaacaacgtattcatcatcttataa 308  Q
    ||||||| ||||||||| ||||| |||||||||||||||||    
T  20983591 tcttataataatataaccacaacatattcatcatcttataa 20983551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 1e-35; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 31769 - 31845
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31769 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 31845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 12706157 - 12706081
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12706157 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12706081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 12713584 - 12713660
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12713584 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12713660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 12717331 - 12717407
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12717331 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12717407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 12722242 - 12722318
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12722242 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12722318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 16908544 - 16908468
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16908544 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 16908468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 18278038 - 18278114
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18278038 agtacacttaacaactcatagatatcatcatgcaatcatcatcactaataactttaaaacaacacaatataatcatc 18278114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 18282002 - 18282078
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18282002 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaaaaactttaaaacaacacaatataatcatc 18282078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 2833516 - 2833442
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2833516 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 2833442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 15083270 - 15083344
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15083270 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 15083344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 39721240 - 39721314
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  39721240 agtacatttaacaactcatagatatcatcatgtaatcatcattactaataactttaaaacaacacaatgtaatca 39721314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 31994 - 32067
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  31994 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 32067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 12713809 - 12713882
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12713809 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 12713882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 12717633 - 12717706
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12717633 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 12717706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 12722544 - 12722617
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12722544 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 12722617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 25928406 - 25928330
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25928406 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataacttt-aaacaacacaatataatcatca 25928330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 2531367 - 2531293
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    ||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||    
T  2531367 agtacacctaacaactcatagatatcttcatataatcatcatcactaataactttaaaacaacacaatgtaatca 2531293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 7520250 - 7520176
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  7520250 agtacatttaacaactcatagataacatcatgtaatcatcatcactgataactttaaaacaacacaatgtaatca 7520176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 20486786 - 20486861
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  20486786 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 20486861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10607355 - 10607280
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  10607355 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcatca 10607280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9752542 - 9752467
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||||||||||||  |||||||||||||| |||||||    
T  9752542 agtacatttaacaactcatagataacatcatgtaattatcatcactaataactt--aaacaacacaatatgatcatca 9752467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16582465 - 16582540
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| ||||||||||||| ||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  16582465 agtacatttaacaactcataaataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcatca 16582540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 18301395 - 18301466
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatc 74  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||||||  ||||||||||||||||||    
T  18301395 agtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatc 18301466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 262 - 315
Target Start/End: Complemental strand, 2833253 - 2833200
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 315  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2833253 tcatcttcttataataatataacaacaacgtattcatcatcttataaaatataa 2833200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 262 - 315
Target Start/End: Original strand, 18278264 - 18278317
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 315  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18278264 tcatcttcttatattaatataacaacaatgtattcatcatcttataaaatataa 18278317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 262 - 315
Target Start/End: Original strand, 18282227 - 18282280
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 315  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18282227 tcatcttcttatattaatataacaacaatgtattcatcatcttataaaatataa 18282280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26291201 - 26291254
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26291201 agtacacttaacaactcatagataacatcatgtaatcatcatcactaataactt 26291254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 278 - 334
Target Start/End: Original strand, 18278344 - 18278401
Alignment:
Q  278 atataacaacaacgtattcatcatcttata-aaatataatcaacacatactaacacca 334  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18278344 atatagcaacaacgtattcatcatcttatataaatataatcaacacatactaacacca 18278401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 336
Target Start/End: Complemental strand, 45171285 - 45171207
Alignment:
Q  262 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  45171285 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 45171207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 1860056 - 1859980
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatc-atcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| ||||||||||||| ||| |||| |||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  1860056 agtacatttaacaactcatatataacatcctgtaatcatcaatcactaataactt--aaacaacacaatataatcatca 1859980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13919447 - 13919371
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatc-atcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| ||||||||||||| ||| |||| |||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  13919447 agtacatttaacaactcatatataacatcctgtaatcatcaatcactaataactt--aaacaacacaatataatcatca 13919371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 77
Target Start/End: Complemental strand, 72383 - 72341
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  72383 atcatcatcactaataactttaaaacaacacaatataatcatc 72341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 77
Target Start/End: Complemental strand, 76492 - 76450
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  76492 atcatcatcactaataactttaaaacaacacaatataatcatc 76450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 315
Target Start/End: Complemental strand, 2531104 - 2531050
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 315  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  2531104 tcatcttcttatattaatataacaacaacgtaatcatcatcttatgaaaatataa 2531050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 18282306 - 18282364
Alignment:
Q  277 aatataacaacaacgtattcatcatcttata-aaatataatcaacacatactaacacca 334  Q
    |||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  18282306 aatatagcaacgacgtattcatcatcttatataaatataatcaacacatactaacacca 18282364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 315
Target Start/End: Original strand, 26291374 - 26291428
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 315  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26291374 tcattttcttatattaatataacaacaacgtattcatcatcttatgaaaatataa 26291428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 334
Target Start/End: Complemental strand, 72026 - 71970
Alignment:
Q  279 tataacaacaacgtattcatcatcttataaaa-tataatcaacacatactaacacca 334  Q
    ||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  72026 tataataacaacatattcatcatcttataaaaatataatcaacacatactaacacca 71970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 334
Target Start/End: Complemental strand, 76135 - 76079
Alignment:
Q  279 tataacaacaacgtattcatcatcttataaaa-tataatcaacacatactaacacca 334  Q
    ||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  76135 tataataacaacatattcatcatcttataaaaatataatcaacacatactaacacca 76079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 12705879 - 12705815
Alignment:
Q  271 tatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||| ||||||||||||||| |||||||| | |||| ||||||||||||||||||||||||||||    
T  12705879 tataataatataacaacaacatattcatctttttatgaaaatataatcaacacatactaacacca 12705815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 39268348 - 39268301
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaa 48  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||    
T  39268348 agtacatttaacaactcatagataacatcatgtaatcatcatcactaa 39268301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 314
Target Start/End: Original strand, 18282274 - 18282311
Alignment:
Q  277 aatataacaacaacgtattcatcatcttataaaatata 314  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18282274 aatataacaacaacgtattcatcatcttataaaatata 18282311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 11660326 - 11660370
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||    
T  11660326 agtacatttaacaactcatagataacatcatgtaatcatcatcac 11660370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 13891674 - 13891718
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||    
T  13891674 agtacatttaacaactcatagataacatcatgtaatcatcatcac 13891718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 45171512 - 45171472
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  45171512 atcatcatcactaataactttaaaacaacacaatgtaatca 45171472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 314
Target Start/End: Original strand, 18278311 - 18278348
Alignment:
Q  277 aatataacaacaacgtattcatcatcttataaaatata 314  Q
    |||||||||||||||||||||||||||||||| |||||    
T  18278311 aatataacaacaacgtattcatcatcttataagatata 18278348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 6170800 - 6170760
Alignment:
Q  268 tcttatattaatataacaacaacgtattcatcatcttataa 308  Q
    ||||||| ||||||||||||||| |||||||||||||||||    
T  6170800 tcttataataatataacaacaacatattcatcatcttataa 6170760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 13892057 - 13892097
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatca 41  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
T  13892057 agtacatttaacaactcatagataacatcatgtaatcatca 13892097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 321
Target Start/End: Original strand, 15112352 - 15112412
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataa-aatataatcaaca 321  Q
    ||||| ||| ||| ||||||||||||||| ||||||||||||||||| ||||||| |||||    
T  15112352 tcatcatctcataataatataacaacaacatattcatcatcttataataatataagcaaca 15112412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 321
Target Start/End: Original strand, 15115924 - 15115984
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataa-aatataatcaaca 321  Q
    ||||| ||| ||| ||||||||||||||| ||||||||||||||||| ||||||| |||||    
T  15115924 tcatcatctcataataatataacaacaacatattcatcatcttataataatataagcaaca 15115984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 18424601 - 18424637
Alignment:
Q  270 ttatattaatataacaacaacgtattcatcatcttat 306  Q
    ||||| |||||||||||||||||||||||||||||||    
T  18424601 ttataataatataacaacaacgtattcatcatcttat 18424637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 18424714 - 18424750
Alignment:
Q  270 ttatattaatataacaacaacgtattcatcatcttat 306  Q
    ||||| |||||||||||||||||||||||||||||||    
T  18424714 ttataataatataacaacaacgtattcatcatcttat 18424750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 25928242 - 25928194
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 310  Q
    ||||| |||||||  |||||||||||||| |||||||||||||||||||    
T  25928242 tcatcatcttataaaaatataacaacaacatattcatcatcttataaaa 25928194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 308
Target Start/End: Complemental strand, 6170872 - 6170826
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 308  Q
    ||||| ||||||| |||||| |||||||| |||||||||||||||||    
T  6170872 tcatcatcttataataatatgacaacaacatattcatcatcttataa 6170826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 308
Target Start/End: Complemental strand, 9390423 - 9390377
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 308  Q
    ||||| ||||||| ||||||||||||| | |||||||||||||||||    
T  9390423 tcatcatcttataataatataacaacatcatattcatcatcttataa 9390377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 315
Target Start/End: Original strand, 16582665 - 16582719
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttata-aaatataa 315  Q
    ||||| ||||||| ||||||||||||||| |||||| ||||||||| ||||||||    
T  16582665 tcatcatcttataataatataacaacaacatattcaccatcttatagaaatataa 16582719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 18424279 - 18424321
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatc 43  Q
    |||||| |||||||||||||||||  |||||||||||||||||    
T  18424279 agtacatttaacaactcatagataatatcatgtaatcatcatc 18424321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 45171535 - 45171505
Alignment:
Q  1 agtacacttaacaactcatagatatcatcat 31  Q
    |||||||||||||||||||||||||||||||    
T  45171535 agtacacttaacaactcatagatatcatcat 45171505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 310
Target Start/End: Complemental strand, 2833206 - 2833173
Alignment:
Q  277 aatataacaacaacgtattcatcatcttataaaa 310  Q
    |||||||||||||| |||||||||||||||||||    
T  2833206 aatataacaacaacatattcatcatcttataaaa 2833173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 8467864 - 8467905
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatct 303  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  8467864 tcatcatcttataataatataacaacaacatattcatcatct 8467905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 10502089 - 10502048
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatct 303  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||    
T  10502089 tcatcatcttatattaatataacaacaacatattcctcatct 10502048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 10607179 - 10607142
Alignment:
Q  270 ttatattaatataacaacaacgtattcatcatcttata 307  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  10607179 ttataataatataacaacaacatattcatcatcttata 10607142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 14270795 - 14270754
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatct 303  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  14270795 tcatcatcttataataatataacaacaacatattcatcatct 14270754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 17231859 - 17231900
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatct 303  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  17231859 tcatcatcttataataatataacaacaacatattcatcatct 17231900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 17231924 - 17231965
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatct 303  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  17231924 tcatcatcttataataatataacaacaacatattcatcatct 17231965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 17231989 - 17232030
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatct 303  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  17231989 tcatcatcttataataatataacaacaacatattcatcatct 17232030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 17232054 - 17232095
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatct 303  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  17232054 tcatcatcttataataatataacaacaacatattcatcatct 17232095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 14420831 - 14420875
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  14420831 agtacatttaacaactcatagataacatcacataatcatcatcac 14420875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 16005048 - 16005092
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  16005048 agtacatttaacaactcatagataacatcacataatcatcatcac 16005092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 18606382 - 18606426
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  18606382 agtacatttaacaactcatagataacatcacataatcatcatcac 18606426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 18871341 - 18871385
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  18871341 agtacatttaacaactcatagataacatcacataatcatcatcac 18871385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 1e-35; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 8242456 - 8242532
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8242456 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 8242532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 11565445 - 11565521
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11565445 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 11565521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 12620368 - 12620292
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12620368 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12620292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 22861799 - 22861875
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22861799 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 22861875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 23988347 - 23988423
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23988347 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 23988423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 11716975 - 11716898
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  11716975 agtacacttaacaactcatagatatcatcatgtaatcatcatcattaataactttaaaacaacacaatataaacatca 11716898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 27555583 - 27555657
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  27555583 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaactcaatgtaatca 27555657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 8242759 - 8242832
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8242759 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 8242832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 11565747 - 11565820
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11565747 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 11565820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Complemental strand, 12620063 - 12619990
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12620063 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 12619990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 23988845 - 23988918
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23988845 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 23988918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 22948002 - 22948074
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacc 333  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22948002 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacc 22948074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 22951958 - 22952030
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacc 333  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22951958 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacc 22952030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 23870446 - 23870518
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacc 333  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23870446 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacc 23870518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 23874402 - 23874474
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacc 333  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23874402 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacc 23874474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 22075425 - 22075347
Alignment:
Q  1 agtacacttaacaactcatagatat----catcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22075425 agtacacttaacaactcatagatatatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 22075347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 2076332 - 2076405
Alignment:
Q  3 tacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  2076332 tacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 2076405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 18918615 - 18918540
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||||||  |||| | |||||||||||||||    
T  18918615 agtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaactatacaatataatcatca 18918540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23400722 - 23400775
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 54  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  23400722 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt 23400775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 336
Target Start/End: Original strand, 19869481 - 19869559
Alignment:
Q  262 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  19869481 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 19869559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 336
Target Start/End: Original strand, 23393935 - 23394013
Alignment:
Q  262 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  23393935 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 23394013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 336
Target Start/End: Original strand, 23413843 - 23413921
Alignment:
Q  262 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  23413843 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 23413921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 315
Target Start/End: Original strand, 1643552 - 1643606
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 315  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  1643552 tcatctccttatattaatataacaacaacgtattcatcatcttatgaaaatataa 1643606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14470925 - 14471000
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    ||||||| |||||||||||| ||||| |||| ||||| ||||||||||||||||  |||| |||||||||||||||||    
T  14470925 agtacacctaacaactcataaatatcttcatataatcttcatcactaataactt--aaactacacaatataatcatca 14471000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 271 - 336
Target Start/End: Original strand, 14471234 - 14471300
Alignment:
Q  271 tatattaatataacaacaacgtattcatcatcttataa-aatataatcaacacatactaacaccata 336  Q
    |||| ||||||||||||||| |||||||| |||||||  ||||||||||||||||||||||||||||    
T  14471234 tataataatataacaacaacatattcatcttcttatattaatataatcaacacatactaacaccata 14471300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 22947734 - 22947776
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22947734 atcatcatcactaataactttaaaacaacacaatataatcatc 22947776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 22951690 - 22951732
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22951690 atcatcatcactaataactttaaaacaacacaatataatcatc 22951732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 23870178 - 23870220
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23870178 atcatcatcactaataactttaaaacaacacaatataatcatc 23870220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 23874134 - 23874176
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23874134 atcatcatcactaataactttaaaacaacacaatataatcatc 23874176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 22075158 - 22075110
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 310  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  22075158 tcatcttcttatattaatataacaacaacntattaatcatcttataaaa 22075110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 334
Target Start/End: Original strand, 16759139 - 16759195
Alignment:
Q  279 tataacaacaacgtattcatcatcttataaaa-tataatcaacacatactaacacca 334  Q
    ||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  16759139 tataataacaacatattcatcatcttataaaaatataatcaacacatactaacacca 16759195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 16758782 - 16758824
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  16758782 atcatcatcactaataaatttaaaacaacacaatataatcatc 16758824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 315
Target Start/End: Complemental strand, 18918469 - 18918416
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 315  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  18918469 tcatcttcttatatta-tataacaacaacgtattcatcatcttatgaaaatataa 18918416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 1643321 - 1643371
Alignment:
Q  26 catcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||||||||||||||||||||||||||  |||| |||||||||||||||||    
T  1643321 catcatgtaatcatcatcactaataactt--aaactacacaatataatcatca 1643371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18953518 - 18953465
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 54  Q
    |||||| |||||||||| |||||  |||||||||||||||||||||||||||||    
T  18953518 agtacatttaacaactcctagatgacatcatgtaatcatcatcactaataactt 18953465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 19869254 - 19869294
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  19869254 atcatcatcactaataactttaaaacaacacaatgtaatca 19869294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 23393708 - 23393748
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  23393708 atcatcatcactaataactttaaaacaacacaatgtaatca 23393748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 23413616 - 23413656
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  23413616 atcatcatcactaataactttaaaacaacacaatgtaatca 23413656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 310
Target Start/End: Complemental strand, 22075119 - 22075077
Alignment:
Q  268 tcttatattaatataacaacaacgtattcatcatcttataaaa 310  Q
    |||||||  |||||||||||||| |||||||||||||||||||    
T  22075119 tcttataaaaatataacaacaacatattcatcatcttataaaa 22075077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 16623154 - 16623190
Alignment:
Q  270 ttatattaatataacaacaacgtattcatcatcttat 306  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  16623154 ttataataatataacaacaacatattcatcatcttat 16623190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 290
Target Start/End: Complemental strand, 18953270 - 18953242
Alignment:
Q  262 tcatcttcttatattaatataacaacaac 290  Q
    |||||||||||||||||||||||||||||    
T  18953270 tcatcttcttatattaatataacaacaac 18953242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 23538025 - 23538069
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||| | |||||||||||||| |||||    
T  23538025 agtacatttaacaactcatagacaacatcatgtaatcattatcac 23538069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27222876 - 27222920
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  27222876 agtacatttaacaactcatagataacatcacataatcatcatcac 27222920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 31479495 - 31479455
Alignment:
Q  3 tacacttaacaactcatagatatcatcatgtaatcatcatc 43  Q
    |||| |||||||||||||||||  |||||||||||||||||    
T  31479495 tacatttaacaactcatagataatatcatgtaatcatcatc 31479455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 19474207 - 19474131
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19474207 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 19474131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 20294558 - 20294634
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20294558 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 20294634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 18354841 - 18354915
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18354841 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 18354915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 24768596 - 24768530
Alignment:
Q  2 gtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaat 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24768596 gtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaat 24768530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 262 - 336
Target Start/End: Complemental strand, 19473905 - 19473830
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19473905 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacaccata 19473830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 20294786 - 20294859
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20294786 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 20294859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 20912287 - 20912212
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  20912287 agtacacttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaatacaatataatcatca 20912212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 15238152 - 15238077
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||  |||| |||||||||||||||||    
T  15238152 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatcatca 15238077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22108484 - 22108409
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||| ||||||||    
T  22108484 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatagaatcatca 22108409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 262 - 315
Target Start/End: Original strand, 18355055 - 18355108
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18355055 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 18355108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 271 - 336
Target Start/End: Original strand, 11226427 - 11226493
Alignment:
Q  271 tatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  11226427 tataataatataacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 11226493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 262 - 315
Target Start/End: Complemental strand, 24768290 - 24768237
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24768290 tcatcttcttatattaatataacaacaacgtattcatcatcttataaagtataa 24768237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22120626 - 22120551
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||||||||| ||  ||| ||||||||||||||||||    
T  22120626 agtacatttaacaactcatagataacatcatataatcatcatcactaataaatt--aaataacacaatataatcatca 22120551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 40727434 - 40727359
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||||  ||||||| ||||||||| |||||||||||||||||||||||||||  |||| |||||||||||||||||    
T  40727434 agtacaccaaacaacttatagatatcttcatgtaatcatcatcactaataactt--aaactacacaatataatcatca 40727359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 336
Target Start/End: Original strand, 11219849 - 11219927
Alignment:
Q  262 tcatcttcttatattaatataaca---acaacgtattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    |||||||| |||| ||||||||||   ||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  11219849 tcatcttcatataataatataacagcaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 11219927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 336
Target Start/End: Original strand, 11224435 - 11224513
Alignment:
Q  262 tcatcttcttatattaatataaca---acaacgtattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    |||||||| |||| ||||||||||   ||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  11224435 tcatcttcatataataatataacagcaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 11224513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 336
Target Start/End: Original strand, 11230247 - 11230325
Alignment:
Q  262 tcatcttcttatattaatataaca---acaacgtattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    |||||||| |||| ||||||||||   ||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  11230247 tcatcttcatataataatataacagcaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 11230325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 18355179 - 18355234
Alignment:
Q  282 aacaacaacgtattcatcatcttataaaa-tataatcaacacatactaacaccata 336  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  18355179 aacaacaacatattcatcatcttataaaaatataatcaacacatactaacaccata 18355234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 282 - 334
Target Start/End: Complemental strand, 40727122 - 40727069
Alignment:
Q  282 aacaacaacgtattcatcatcttataaaa-tataatcaacacatactaacacca 334  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  40727122 aacaacaacatattcatcatcttataaaaatataatcaacacatactaacacca 40727069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 330
Target Start/End: Original strand, 11228257 - 11228329
Alignment:
Q  262 tcatcttcttatattaatataaca---acaacgtattcatcatcttat-aaaatataatcaacacatactaac 330  Q
    |||||||| |||| ||||||||||   ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  11228257 tcatcttcatataataatataacagcaacaacatattcatcatcttatcaaaatataatcaacacatactaac 11228329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 11219622 - 11219662
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  11219622 atcatcatcactaataactttaaaacaacacaatgtaatca 11219662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 11224208 - 11224248
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  11224208 atcatcatcactaataactttaaaacaacacaatgtaatca 11224248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 11226224 - 11226264
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  11226224 atcatcatcactaataactttaaaacaacacaatgtaatca 11226264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 11228030 - 11228070
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  11228030 atcatcatcactaataactttaaaacaacacaatgtaatca 11228070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 11230020 - 11230060
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  11230020 atcatcatcactaataactttaaaacaacacaatgtaatca 11230060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 20912144 - 20912104
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatc 302  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  20912144 tcatcttcttatattaatataacaacaatatattcatcatc 20912104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 310
Target Start/End: Complemental strand, 22108236 - 22108196
Alignment:
Q  270 ttatattaatataacaacaacgtattcatcatcttataaaa 310  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  22108236 ttataataatataacaacaacatattcatcatcttataaaa 22108196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 308
Target Start/End: Complemental strand, 5889863 - 5889817
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 308  Q
    ||||| ||||||| ||||||||||||| | |||||||||||||||||    
T  5889863 tcatcatcttataataatataacaacatcatattcatcatcttataa 5889817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10751861 - 10751903
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatc 43  Q
    |||||| |||||||||||||||||  |||||||||||||||||    
T  10751861 agtacatttaacaactcatagataatatcatgtaatcatcatc 10751903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 315
Target Start/End: Complemental strand, 22120381 - 22120335
Alignment:
Q  270 ttatattaatataacaacaacgtattcatcatcttata-aaatataa 315  Q
    ||||| ||||||||||||||| |||||||||||||||| ||||||||    
T  22120381 ttataataatataacaacaacatattcatcatcttatagaaatataa 22120335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 308
Target Start/End: Complemental strand, 5889918 - 5889886
Alignment:
Q  276 taatataacaacaacgtattcatcatcttataa 308  Q
    ||||||||||||||| |||||||||||||||||    
T  5889918 taatataacaacaacatattcatcatcttataa 5889886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19510506 - 19510550
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  19510506 agtacatttaacaactcatagataacatcacataatcatcatcac 19510550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 307
Target Start/End: Complemental strand, 20912176 - 20912132
Alignment:
Q  263 catcttcttatattaatataacaacaacgtattcatcatcttata 307  Q
    |||| ||||||| ||||||||||||||| |||||||| |||||||    
T  20912176 catcatcttataataatataacaacaacatattcatcttcttata 20912132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 22339056 - 22339100
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  22339056 agtacatttaacaactcatagataacatcacataatcatcatcac 22339100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 23113437 - 23113393
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  23113437 agtacatttaacaactcatagataacatcacataatcatcatcac 23113393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 28372116 - 28372072
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  28372116 agtacatttaacaactcatagataacatcacataatcatcatcac 28372072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37600043 - 37599999
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  37600043 agtacatttaacaactcatagataacatcacataatcatcatcac 37599999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 38146453 - 38146409
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  38146453 agtacatttaacaactcatagataacatcacataatcatcatcac 38146409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 39362991 - 39363027
Alignment:
Q  6 acttaacaactcatagatatcatcatgtaatcatcat 42  Q
    ||||||||||||||||| | |||||||||||||||||    
T  39362991 acttaacaactcatagacaacatcatgtaatcatcat 39363027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 41878686 - 41878642
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  41878686 agtacatttaacaactcatagataacatcacataatcatcatcac 41878642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 1e-35; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 9555113 - 9555189
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9555113 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 9555189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 14759026 - 14758950
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14759026 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 14758950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 14955794 - 14955718
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14955794 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 14955718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 17807098 - 17807174
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17807098 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 17807174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 25688486 - 25688562
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25688486 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 25688562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 4562808 - 4562732
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4562808 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacccaatataatcatc 4562732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 5758490 - 5758414
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5758490 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatagaatcatc 5758414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 33740880 - 33740956
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  33740880 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataattttaaaacaacacaatataatcatc 33740956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 20158482 - 20158408
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20158482 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 20158408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 20161158 - 20161084
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  20161158 agtacacttaacaactcatagatatcatcatgtaatcgtcatcactaataactttaaaacaacacaatgtaatca 20161084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 20163933 - 20163859
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  20163933 agtacacttaacaactcatagatatcatcatgtaatcgtcatcactaataactttaaaacaacacaatgtaatca 20163859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 12486315 - 12486388
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||    
T  12486315 agtacacttaacaactcatagatatcatcatgta---atcatcactaataactttaaaacaacacaatataatcatc 12486388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Complemental strand, 4562506 - 4562433
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4562506 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 4562433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 9555415 - 9555488
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9555415 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 9555488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Complemental strand, 14758647 - 14758574
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14758647 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 14758574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Complemental strand, 14955412 - 14955339
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14955412 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 14955339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 33741185 - 33741258
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  33741185 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 33741258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 25688788 - 25688860
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacc 333  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25688788 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacc 25688860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 10711869 - 10711943
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10711869 agtacatttaacaactcctagataacatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 10711943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 10925639 - 10925713
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10925639 agtacatttaacaactcctagataacatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 10925713  T

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Target: chr4; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 12422987 - 12423062
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  12422987 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 12423062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17052480 - 17052405
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  17052480 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 17052405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 23997001 - 23996926
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  23997001 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 23996926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 262 - 334
Target Start/End: Complemental strand, 5758031 - 5757958
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  5758031 tcatcttcttgtattaatataacaacaacatattcatcatcttatgaaaatataatcaacacatactaacacca 5757958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 631782 - 631711
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatc 74  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||    
T  631782 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatc 631711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22634961 - 22634886
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||| |||||||    
T  22634961 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatatgatcatca 22634886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 27532796 - 27532871
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||||||  |||| |||||||||||||||||    
T  27532796 agtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatcatca 27532871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 336
Target Start/End: Original strand, 12486537 - 12486615
Alignment:
Q  262 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  12486537 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 12486615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 13813867 - 13813820
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaa 48  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||    
T  13813867 agtacatttaacaactcatagataacatcatgtaatcatcatcactaa 13813820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 13818355 - 13818308
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaa 48  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||    
T  13818355 agtacatttaacaactcatagataacatcatgtaatcatcatcactaa 13818308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 315
Target Start/End: Original strand, 27532942 - 27532995
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 315  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  27532942 tcatcttcttatatta-tataacaacaacgtattcatcatcttatgaaaatataa 27532995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 24048419 - 24048375
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||    
T  24048419 agtacatttaacaactcatagataacatcatgtaatcatcatcac 24048375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 336
Target Start/End: Complemental strand, 631636 - 631561
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataa-aatataatcaacacatactaacaccata 336  Q
    ||||||| ||||| ||||||||||||||| |||||||||| |||||| ||||||| || |||||| ||||| ||||    
T  631636 tcatctttttataataatataacaacaacatattcatcattttataataatataaacagcacataataacatcata 631561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 308
Target Start/End: Original strand, 15189737 - 15189783
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 308  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  15189737 tcatcatcttataataatataacaacaacatattcatcatcttataa 15189783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 308
Target Start/End: Original strand, 15189770 - 15189816
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 308  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  15189770 tcatcatcttataataatataacaacaacatattcatcatcttataa 15189816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 15223912 - 15223948
Alignment:
Q  270 ttatattaatataacaacaacgtattcatcatcttat 306  Q
    ||||| |||||||||||||||||||||||||||||||    
T  15223912 ttataataatataacaacaacgtattcatcatcttat 15223948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 15223590 - 15223632
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatc 43  Q
    |||||| |||||||||||||||||  |||||||||||||||||    
T  15223590 agtacatttaacaactcatagataatatcatgtaatcatcatc 15223632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 308
Target Start/End: Original strand, 12423189 - 12423234
Alignment:
Q  263 catcttcttatattaatataacaacaacgtattcatcatcttataa 308  Q
    |||| ||||||| ||||||||||||||| |||||||||| ||||||    
T  12423189 catcgtcttataataatataacaacaacatattcatcattttataa 12423234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 15482039 - 15481998
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatct 303  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  15482039 tcatcatcttataataatataacaacaacatattcatcatct 15481998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 19857007 - 19857048
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatct 303  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  19857007 tcatcatcttataataatataacaacaacatattcatcatct 19857048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15533263 - 15533307
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  15533263 agtacatttaacaactcatagataacatcacataatcatcatcac 15533307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 18211648 - 18211692
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  18211648 agtacatttaacaactcatagataacatcacataatcatcatcac 18211692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 49549117 - 49549073
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  49549117 agtacatttaacaactcatagataacatcacataatcatcatcac 49549073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 1e-35; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 7108282 - 7108358
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7108282 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 7108358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 7112217 - 7112293
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7112217 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 7112293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 11068657 - 11068733
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11068657 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 11068733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 22320173 - 22320249
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22320173 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 22320249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 22335228 - 22335304
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22335228 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 22335304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 55021420 - 55021496
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55021420 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 55021496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 11167128 - 11167052
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11167128 agtaaacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 11167052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 14497991 - 14498067
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14497991 agtacacttaacaactcatagatatcatcatgtaatcatcatcgctaataactttaaaacaacacaatataatcatc 14498067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 15616221 - 15616297
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15616221 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacattataatcatc 15616297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 28948505 - 28948581
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28948505 agtacacttaacaacttatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 28948581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 5219891 - 5219965
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5219891 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 5219965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 11853750 - 11853824
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11853750 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 11853824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 37440715 - 37440641
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37440715 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 37440641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 11301700 - 11301626
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  11301700 agtacacttaacaactcatagatatcatcatgcaatcatcatcactaataactttaaaacaacacaatgtaatca 11301626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 14664469 - 14664543
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  14664469 agtacacttaacaactcatagatatcattatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14664543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 14667633 - 14667707
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14667633 agtacacttaacaactcatagatctcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14667707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 262 - 336
Target Start/End: Original strand, 11069036 - 11069111
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11069036 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacaccata 11069111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 7108584 - 7108657
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7108584 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 7108657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 7112519 - 7112592
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7112519 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 7112592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 14498293 - 14498366
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14498293 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 14498366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 15616523 - 15616596
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15616523 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 15616596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 22320552 - 22320625
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22320552 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 22320625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 22335607 - 22335680
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22335607 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 22335680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 28948730 - 28948803
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  28948730 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 28948803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 30064735 - 30064808
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30064735 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 30064808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 55021873 - 55021946
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  55021873 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 55021946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16795547 - 16795622
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  16795547 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 16795622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 262 - 334
Target Start/End: Complemental strand, 11166749 - 11166676
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    ||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11166749 tcatcctcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 11166676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 12853398 - 12853325
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 76  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  12853398 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 12853325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 262 - 336
Target Start/End: Complemental strand, 14067747 - 14067672
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttata-aaatataatcaacacatactaacaccata 336  Q
    ||||| |||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  14067747 tcatcatcttataaaaatataacaacaacgtattcatcatcttatataaatataatcaacacatactgacaccata 14067672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18933390 - 18933337
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18933390 agtacacttaacaactcatagataacatcatgtaatcatcatcactaataactt 18933337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30064429 - 30064482
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  30064429 agtacacttaacaactcatagataacatcatgtaatcatcatcactaataactt 30064482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 11301437 - 11301389
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11301437 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 11301389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 4590195 - 4590124
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatc 74  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||||||  |||| |||||||||||||    
T  4590195 agtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatc 4590124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 14068095 - 14068022
Alignment:
Q  3 tacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||| ||| |||||| |||||| |||||||||||||||||||||||||||||  |||| |||||||||||||||||    
T  14068095 tacatttagcaactcctagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatcatca 14068022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 14664735 - 14664783
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 310  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14664735 tcatcttcttatattaatataacaaaaacgtattcatcatcttataaaa 14664783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 14667899 - 14667947
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 310  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14667899 tcatcttcttatattaatataacaacaacatattcatcatcttataaaa 14667947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14670070 - 14670142
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||   |||||||||||||||||  ||||||||||||||||||||||    
T  14670070 agtacatttaacaactcatagataacatcatgta---atcatcactaataactt--aaacaacacaatataatcatca 14670142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 336
Target Start/End: Original strand, 15963791 - 15963869
Alignment:
Q  262 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  15963791 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 15963869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 336
Target Start/End: Original strand, 15967715 - 15967793
Alignment:
Q  262 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  15967715 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 15967793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 336
Target Start/End: Original strand, 15971639 - 15971717
Alignment:
Q  262 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  15971639 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 15971717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 15463922 - 15463998
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatc-atcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| ||||||||||||| ||| |||| |||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  15463922 agtacatttaacaactcatatataacatcctgtaatcatcaatcactaataactt--aaacaacacaatataatcatca 15463998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 77
Target Start/End: Complemental strand, 4112649 - 4112607
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4112649 atcatcatcactaataactttaaaacaacacaatataatcatc 4112607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17318544 - 17318469
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| |||||||||| |||||| | ||||||| |||||||||||||||||||  |||| |||||||||||||||||    
T  17318544 agtacatttaacaactcctagataacttcatgtattcatcatcactaataactt--aaactacacaatataatcatca 17318469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 4108800 - 4108759
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatcat 76  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4108800 atcatcatcactaataactttaaaacaacacaatataatcat 4108759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 334
Target Start/End: Complemental strand, 4108443 - 4108387
Alignment:
Q  279 tataacaacaacgtattcatcatcttataaaa-tataatcaacacatactaacacca 334  Q
    ||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  4108443 tataataacaacatattcatcatcttataaaaatataatcaacacatactaacacca 4108387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 334
Target Start/End: Complemental strand, 4112295 - 4112239
Alignment:
Q  279 tataacaacaacgtattcatcatcttataaaa-tataatcaacacatactaacacca 334  Q
    ||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  4112295 tataataacaacatattcatcatcttataaaaatataatcaacacatactaacacca 4112239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12337300 - 12337348
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataa 51  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  12337300 agtacacttaacaactcata--tatcatcatgtaatcatcatcactaataa 12337348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 4589936 - 4589893
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  4589936 tcatcttcttatatta-tataacaacaacgtattcatcatcttat 4589893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 15963564 - 15963604
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  15963564 atcatcatcactaataactttaaaacaacacaatgtaatca 15963604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 15967488 - 15967528
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  15967488 atcatcatcactaataactttaaaacaacacaatgtaatca 15967528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 15971412 - 15971452
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  15971412 atcatcatcactaataactttaaaacaacacaatgtaatca 15971452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 14067777 - 14067732
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 310  Q
    |||||||||||||||||||   |||||||||||||||||||||||||||    
T  14067777 tcatcttcttatattaata---caacaacgtattcatcatcttataaaa 14067732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 308
Target Start/End: Complemental strand, 18440629 - 18440583
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 308  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  18440629 tcatcatcttataataatataacaacaacatattcatcatcttataa 18440583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 308
Target Start/End: Complemental strand, 19485703 - 19485657
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 308  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  19485703 tcatcatcttataataatataacaacaacatattcatcatcttataa 19485657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 308
Target Start/End: Complemental strand, 49390374 - 49390328
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 308  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  49390374 tcatcatcttataataatataacaacaacatattcatcatcttataa 49390328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10834976 - 10834935
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcat 42  Q
    |||||| ||||||||||||||||| |||||||||||||||||    
T  10834976 agtacatttaacaactcatagataacatcatgtaatcatcat 10834935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14681594 - 14681664
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| |||||||||||  |||| ||||||||||||||||   ||||||||||  ||||||||||||||||||||||    
T  14681594 agtacatttaacaactca--gataacatcatgtaatcatca---ctaataactt--aaacaacacaatataatcatca 14681664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8928902 - 8928858
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| ||||||| ||||||||||||    
T  8928902 agtacatttaacaactcatagataacatcatgcaatcatcatcac 8928858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 13435862 - 13435906
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||| ||| ||||||||||||||||||||    
T  13435862 agtacatttaacaactcatatataacatcatgtaatcatcatcac 13435906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 306
Target Start/End: Complemental strand, 16751616 - 16751580
Alignment:
Q  270 ttatattaatataacaacaacgtattcatcatcttat 306  Q
    ||||| |||||||||||||||||||||||||||||||    
T  16751616 ttataataatataacaacaacgtattcatcatcttat 16751580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 19774548 - 19774584
Alignment:
Q  270 ttatattaatataacaacaacgtattcatcatcttat 306  Q
    ||||| |||||||||||||||||||||||||||||||    
T  19774548 ttataataatataacaacaacgtattcatcatcttat 19774584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 308
Target Start/End: Complemental strand, 18440551 - 18440505
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 308  Q
    ||||| ||||||| ||||||| ||||||| |||||||||||||||||    
T  18440551 tcatcatcttataataatatagcaacaacatattcatcatcttataa 18440505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 308
Target Start/End: Complemental strand, 19485625 - 19485579
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 308  Q
    ||||| ||||||| ||||||| ||||||| |||||||||||||||||    
T  19485625 tcatcatcttataataatatagcaacaacatattcatcatcttataa 19485579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16751936 - 16751895
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcat 42  Q
    |||||| |||||||||||||||||  ||||||||||||||||    
T  16751936 agtacatttaacaactcatagataatatcatgtaatcatcat 16751895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 3802014 - 3802058
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  3802014 agtacatttaacaactcatagataacatcacataatcatcatcac 3802058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 14764830 - 14764786
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  14764830 agtacatttaacaactcatagataacatcacataatcatcatcac 14764786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20249884 - 20249840
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  20249884 agtacatttaacaactcatagataacatcacataatcatcatcac 20249840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 290
Target Start/End: Complemental strand, 27410987 - 27410959
Alignment:
Q  262 tcatcttcttatattaatataacaacaac 290  Q
    |||||||||||||||||||||||||||||    
T  27410987 tcatcttcttatattaatataacaacaac 27410959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29545973 - 29545929
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  29545973 agtacatttaacaactcatagataacatcacataatcatcatcac 29545929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 54519641 - 54519685
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  54519641 agtacatttaacaactcatagataacatcacataatcatcatcac 54519685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 1e-35; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 24630082 - 24630006
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24630082 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 24630006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 24645195 - 24645271
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24645195 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 24645271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 24647971 - 24648047
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24647971 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 24648047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 27600415 - 27600491
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27600415 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 27600491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 30346692 - 30346616
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30346692 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 30346616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 10103331 - 10103255
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10103331 agtacacttaacaactcatagatatcaacatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 10103255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 12902641 - 12902565
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12902641 agtacacttaacaactcatagatatcattatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12902565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 27381028 - 27380952
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27381028 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacaccatataatcatc 27380952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 27384998 - 27384922
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27384998 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacaccatataatcatc 27384922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 31343961 - 31344035
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31343961 agtacacctaacaactcatagatatcttcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 31344035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Complemental strand, 10103029 - 10102956
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10103029 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 10102956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Complemental strand, 24629700 - 24629627
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24629700 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 24629627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 27600717 - 27600790
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27600717 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 27600790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Complemental strand, 30346236 - 30346163
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30346236 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 30346163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 262 - 334
Target Start/End: Complemental strand, 27384619 - 27384546
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27384619 tcatcttcttgtattaatataacgacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 27384546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 264 - 334
Target Start/End: Complemental strand, 27380571 - 27380500
Alignment:
Q  264 atcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27380571 atcttcttgtattaatataacgacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 27380500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9784038 - 9784113
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| | ||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||| ||||    
T  9784038 agtacattaaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataattatca 9784113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 262 - 315
Target Start/End: Original strand, 31344221 - 31344274
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 315  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  31344221 tcatcttcttgtattaatataacaataacgtattcatcatcttataaaatataa 31344274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 336
Target Start/End: Complemental strand, 41532227 - 41532149
Alignment:
Q  262 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  41532227 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 41532149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 262 - 336
Target Start/End: Original strand, 1282318 - 1282396
Alignment:
Q  262 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||| ||||||||||||||||||||||||    
T  1282318 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatgtaatcaacacatactaacaccata 1282396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 24648249 - 24648313
Alignment:
Q  271 tatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||| ||||||||||||||| |||||||| | |||| ||||||||||||||||||||||||||||    
T  24648249 tataataatataacaacaacatattcatctttttatgaaaatataatcaacacatactaacacca 24648313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 41532454 - 41532414
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  41532454 atcatcatcactaataactttaaaacaacacaatgtaatca 41532414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 41532477 - 41532447
Alignment:
Q  1 agtacacttaacaactcatagatatcatcat 31  Q
    |||||||||||||||||||||||||||||||    
T  41532477 agtacacttaacaactcatagatatcatcat 41532447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6481828 - 6481872
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  6481828 agtacatttaacaactcatagataacatcacataatcatcatcac 6481872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6485295 - 6485339
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  6485295 agtacatttaacaactcatagataacatcacataatcatcatcac 6485339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19663592 - 19663548
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  19663592 agtacatttaacaactcatagataacatcacataatcatcatcac 19663548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 20260301 - 20260345
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  20260301 agtacatttaacaactcatagataacatcacataatcatcatcac 20260345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 21074542 - 21074498
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| ||||||||  ||||||||||    
T  21074542 agtacatttaacaactcatagataacatcatgttgtcatcatcac 21074498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 24647138 - 24647166
Alignment:
Q  1 agtacacttaacaactcatagatatcatc 29  Q
    |||||||||||||||||||||||||||||    
T  24647138 agtacacttaacaactcatagatatcatc 24647166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 1e-35; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 1009306 - 1009382
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1009306 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 1009382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 1926830 - 1926754
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1926830 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 1926754  T

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Target: chr1; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 16376850 - 16376774
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16376850 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 16376774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 20925844 - 20925768
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20925844 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 20925768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 52634312 - 52634388
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52634312 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 52634388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 33796077 - 33796151
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  33796077 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 33796151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 1009608 - 1009681
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1009608 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 1009681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Complemental strand, 1926374 - 1926301
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1926374 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 1926301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Complemental strand, 16376625 - 16376552
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16376625 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 16376552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Complemental strand, 20925388 - 20925315
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20925388 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 20925315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 52634694 - 52634767
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  52634694 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 52634767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22132133 - 22132058
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  22132133 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 22132058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 262 - 315
Target Start/End: Original strand, 33796291 - 33796344
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33796291 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 33796344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 21406297 - 21406372
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||||||  |||| |||||||||||||||||    
T  21406297 agtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatcatca 21406372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 41801313 - 41801238
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| |||||||||||||||||  ||||||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  41801313 agtacatttaacaactcatagataatatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcatca 41801238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 20230173 - 20230120
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20230173 agtacacttaacaactcatagataacatcatgtaatcatcatcactaataactt 20230120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 21406553 - 21406608
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataat 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21406553 tcatcttcttatattaatataacaacaacgtattcatcatcttatgaaaatataat 21406608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 336
Target Start/End: Original strand, 33796436 - 33796503
Alignment:
Q  270 ttatattaatataacaacaacgtattcatcatcttataaaa-tataatcaacacatactaacaccata 336  Q
    ||||| ||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||    
T  33796436 ttataataatataacaacaacatatacatcatcttataaaaatataatcaacacatactaacaccata 33796503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 262 - 315
Target Start/End: Complemental strand, 20229995 - 20229941
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20229995 tcatcttcttatattaatataacaacaacgtattcatcatcttatgaaaatataa 20229941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 308
Target Start/End: Complemental strand, 28195153 - 28195107
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 308  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  28195153 tcatcatcttataataatataacaacaacatattcatcatcttataa 28195107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 308
Target Start/End: Complemental strand, 35982386 - 35982340
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 308  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  35982386 tcatcatcttataataatataacaacaacatattcatcatcttataa 35982340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 21740525 - 21740484
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatct 303  Q
    ||||| ||||||| ||||||||||||||||||||||||||||    
T  21740525 tcatcatcttataataatataacaacaacgtattcatcatct 21740484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 321
Target Start/End: Original strand, 12271028 - 12271088
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataa-aatataatcaaca 321  Q
    ||||| ||| ||| ||||||||||||||| ||||||||||||||||| ||||||| |||||    
T  12271028 tcatcatctcataataatataacaacaacatattcatcatcttataataatataagcaaca 12271088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 306
Target Start/End: Complemental strand, 39244927 - 39244891
Alignment:
Q  270 ttatattaatataacaacaacgtattcatcatcttat 306  Q
    ||||| |||||||||||||||||||||||||||||||    
T  39244927 ttataataatataacaacaacgtattcatcatcttat 39244891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 306
Target Start/End: Complemental strand, 39248482 - 39248446
Alignment:
Q  270 ttatattaatataacaacaacgtattcatcatcttat 306  Q
    ||||| |||||||||||||||||||||||||||||||    
T  39248482 ttataataatataacaacaacgtattcatcatcttat 39248446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 306
Target Start/End: Complemental strand, 41389375 - 41389339
Alignment:
Q  270 ttatattaatataacaacaacgtattcatcatcttat 306  Q
    ||||| |||||||||||||||||||||||||||||||    
T  41389375 ttataataatataacaacaacgtattcatcatcttat 41389339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 41801139 - 41801091
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 310  Q
    ||||| |||||||  |||||||||||||| |||||||||||||||||||    
T  41801139 tcatcatcttataaaaatataacaacaacatattcatcatcttataaaa 41801091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 39245205 - 39245163
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatc 43  Q
    |||||| |||||||||||||||||  |||||||||||||||||    
T  39245205 agtacatttaacaactcatagataatatcatgtaatcatcatc 39245163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 39248760 - 39248718
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatc 43  Q
    |||||| |||||||||||||||||  |||||||||||||||||    
T  39248760 agtacatttaacaactcatagataatatcatgtaatcatcatc 39248718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 41389699 - 41389657
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatc 43  Q
    |||||| |||||||||||||||||  |||||||||||||||||    
T  41389699 agtacatttaacaactcatagataatatcatgtaatcatcatc 41389657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 20315609 - 20315650
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatct 303  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  20315609 tcatcatcttataataatataacaacaacatattcatcatct 20315650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 41306283 - 41306242
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatct 303  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  41306283 tcatcatcttataataatataacaacaacatattcatcatct 41306242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 16370969 - 16371013
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  16370969 agtacatttaacaactcatagataacatcacataatcatcatcac 16371013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 21740389 - 21740349
Alignment:
Q  268 tcttatattaatataacaacaacgtattcatcatcttataa 308  Q
    ||||||| ||||||||||||||| |||||||||||| ||||    
T  21740389 tcttataataatataacaacaacatattcatcatctcataa 21740349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 41801171 - 41801124
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 310  Q
    ||||| ||||||| ||||||| ||||||| |||||||||||||||||||    
T  41801171 tcatcatcttataataatatatcaacaac-tattcatcatcttataaaa 41801124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 6355 - 6279
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6355 agtacacttaacaactcatagatatcatcatgtaatcatcatcgctaataactttaaaacaacacaatataatcatc 6279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 263 - 334
Target Start/End: Complemental strand, 6239 - 6167
Alignment:
Q  263 catcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6239 catcttcttatattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 6167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 60360 - 60283
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataac-tttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  60360 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataacttttaaaacaacacaatataatcatc 60283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 11095 - 11170
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11095 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaa-ataatcatc 11170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 11402 - 11475
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11402 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 11475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 855 - 781
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  855 agtacacttaacaactcatagatatcatcatgcaatcatcatcactaataactttaaaacaacacaatgtaatca 781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 14888 - 14962
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14888 agtacacttaacaactcatagatatcttcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 11093 - 11027
Alignment:
Q  2 gtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaat 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11093 gtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaat 11027  T

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Target: scaffold0166; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 262 - 315
Target Start/End: Complemental strand, 10787 - 10734
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10787 tcatcttcttatattaatataacaacaacgtattcatcatcttataaagtataa 10734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 8621 - 8695
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||    
T  8621 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaaaaacactatgtaatca 8695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 8885 - 8933
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 310  Q
    ||||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  8885 tcatctttttatattaatataacaaaaacgtattcatcattttataaaa 8933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 34162 - 34089
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 77  Q
    |||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  34162 agtacacttaacaactcatagatatcatcatgtaatc---atcactaataactttaaaacaacacaatataatcatc 34089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 336
Target Start/End: Complemental strand, 33940 - 33862
Alignment:
Q  262 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  33940 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 33862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 11821 - 11895
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 75  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  11821 agtacacttaacaactcatagatttcatcatgtaatcatcatcactaataattttaaaacaacacaatgtaatca 11895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 21374 - 21298
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21374 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataacttt-aaacaacacaatataatcatca 21298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 21210 - 21162
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 310  Q
    ||||| |||||||  |||||||||||||| |||||||||||||||||||    
T  21210 tcatcatcttataaaaatataacaacaacatattcatcatcttataaaa 21162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 6995 - 6920
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  6995 agtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 6920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 6889 - 6842
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 310  Q
    ||||| ||||||| ||||||| ||||||| |||||||||||||||||||    
T  6889 tcatcatcttataataatatatcaacaac-tattcatcatcttataaaa 6842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 25602 - 25527
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| ||||||||||||||||| ||||||||| |||||||||||||||||||  ||||||||||||||||||||||    
T  25602 agtacatttaacaactcatagataacatcatgtattcatcatcactaataactt--aaacaacacaatataatcatca 25527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 308
Target Start/End: Complemental strand, 25491 - 25446
Alignment:
Q  263 catcttcttatattaatataacaacaacgtattcatcatcttataa 308  Q
    |||| ||||||| ||||||||||||||| ||||||||||| |||||    
T  25491 catcatcttatagtaatataacaacaacatattcatcatcatataa 25446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 262 - 334
Target Start/End: Complemental strand, 5079 - 5006
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 334  Q
    ||||||| || |||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||    
T  5079 tcatctttttgtattaatataacaacaacatattcatcatcttatgaaaacataatcaacacatactaacacca 5006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 5565 - 5490
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    ||||||| ||| |||||||| ||||| |||| ||||||||||||||||||||||    || |||||||||||||||||    
T  5565 agtacacctaagaactcataaatatcttcatataatcatcatcactaataactt--ggactacacaatataatcatca 5490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 8773 - 8699
Alignment:
Q  2 gtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    ||||| |||||||||| |||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  8773 gtacatttaacaactcgtagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcatca 8699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 331
Target Start/End: Complemental strand, 8500 - 8445
Alignment:
Q  277 aatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaaca 331  Q
    |||||||||||||| ||||||||||||||| ||||||||| || |||||| |||||    
T  8500 aatataacaacaacatattcatcatcttataaaaatataaacatcacataataaca 8445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 50; Significance: 1e-19; HSPs: 5)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 262 - 315
Target Start/End: Original strand, 79428 - 79481
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 315  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  79428 tcatcttcttatattaatataacaacaatgtattcatcatcttataaaatataa 79481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 277 - 336
Target Start/End: Original strand, 79475 - 79535
Alignment:
Q  277 aatataacaacaacgtattcatcatcttata-aaatataatcaacacatactaacaccata 336  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  79475 aatataacaacaacgtattcatcatcttacataaatataatcaacacatactaacaccata 79535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 62874 - 62821
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 54  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||||||    
T  62874 agtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt 62821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 315
Target Start/End: Complemental strand, 62621 - 62568
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 315  Q
    |||||||||||||||| ||||||||||||||||||| |||||||| |||||||||    
T  62621 tcatcttcttatatta-tataacaacaacgtattcaacatcttatgaaaatataa 62568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 315
Target Start/End: Complemental strand, 66537 - 66484
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 315  Q
    |||||||||||||||| ||||||||||||||||||| |||||||| |||||||||    
T  66537 tcatcttcttatatta-tataacaacaacgtattcaacatcttatgaaaatataa 66484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 19128 - 19176
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19128 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 19176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 19232 - 19280
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 310  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19232 tcatcttcttatattaatctaacaacaacgtattcatcatcttataaaa 19280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 18867 - 18942
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| ||||||||| ||||||| |||||  ||||||||||||||||||||  | ||||||||||||||||||||||    
T  18867 agtacatttaacaacttatagataacatcacataatcatcatcactaataac--tgaaacaacacaatataatcatca 18942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 11061 - 11109
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11061 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 11109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 10834 - 10874
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  10834 atcatcatcactaataactttaaaacaacacaatgtaatca 10874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 315
Target Start/End: Original strand, 11094 - 11148
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 315  Q
    ||||| |||||||  ||||||||||||| |||||||||||||||| |||||||||    
T  11094 tcatcatcttataaaaatataacaacaatgtattcatcatcttatgaaaatataa 11148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 262 - 315
Target Start/End: Original strand, 955 - 1009
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  955 tcatcttcttatattaatataacaacaacgtattcatcatcttatgaaaatataa 1009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 4018 - 4093
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| |||||||||| |||||| |||||||||||||| ||||||||||||||  |||| |||||||||||||||||    
T  4018 agtacatttaacaactcctagataacatcatgtaatcataatcactaataactt--aaactacacaatataatcatca 4093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 74366 - 74291
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 78  Q
    |||||| ||||||||||||||||| ||||||||||||||| |||||||||| ||  ||||||||| ||||||||||||    
T  74366 agtacatttaacaactcatagataacatcatgtaatcatcttcactaataaatt--aaacaacaccatataatcatca 74291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 74117 - 74077
Alignment:
Q  276 taatataacaacaacgtattcatcatcttata-aaatataa 315  Q
    ||||||||||||||| |||||||||||||||| ||||||||    
T  74117 taatataacaacaacatattcatcatcttatagaaatataa 74077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 336
Target Start/End: Complemental strand, 15359 - 15281
Alignment:
Q  262 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  15359 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 15281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 15586 - 15546
Alignment:
Q  35 atcatcatcactaataactttaaaacaacacaatataatca 75  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  15586 atcatcatcactaataactttaaaacaacacaatgtaatca 15546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 15609 - 15579
Alignment:
Q  1 agtacacttaacaactcatagatatcatcat 31  Q
    |||||||||||||||||||||||||||||||    
T  15609 agtacacttaacaactcatagatatcatcat 15579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 37232 - 37179
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 54  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||||||    
T  37232 agtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt 37179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 5869 - 5917
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcactaataa 51  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  5869 agtacacttaacaactcata--tatcatcatgtaatcatcatcactaataa 5917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37237 - 37161
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac-taataactttaaaacaacacaatataatcatca 78  Q
    |||||| ||||||||||||||||| |||||||||||||||||| | |||||||||  | || |||||||||||||||||    
T  37237 agtacatttaacaactcatagataacatcatgtaatcatcatctcataataactt--agaccacacaatataatcatca 37161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28516 - 28560
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||    
T  28516 agtacatttaacaactcatagataacatcatgtaatcatcatcac 28560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 33981 - 34025
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||    
T  33981 agtacatttaacaactcatagataacatcatgtaatcatcatcac 34025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 76 - 134
Alignment:
Q  279 tataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacaccata 336  Q
    |||||||||||| ||||||||||||||| ||||||||| ||||||||| ||||| ||||    
T  76 tataacaacaacatattcatcatcttataaaaatataaacaacacataataacatcata 134  T

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Target: scaffold1873 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1873
Description:

Target: scaffold1873; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 691 - 752
Alignment:
Q  16 tcatagatatcatcatgtaatcatca-tcactaataactttaaaacaacacaatataatcatca 78  Q
    |||| |||| ||||||||||||| || |||||||||||||  ||||||||||||||||||||||    
T  691 tcatggataacatcatgtaatcaccaatcactaataactt--aaacaacacaatataatcatca 752  T

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Target: scaffold0601 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 308
Target Start/End: Complemental strand, 8593 - 8555
Alignment:
Q  270 ttatattaatataacaacaacgtattcatcatcttataa 308  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  8593 ttataataatataacaacaacatattcatcatcttataa 8555  T

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Target: scaffold0601; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 308
Target Start/End: Complemental strand, 8667 - 8621
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 308  Q
    ||||| |||| || ||||||||||||||| |||||||||||||||||    
T  8667 tcatcatcttctaataatataacaacaacatattcatcatcttataa 8621  T

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Target: scaffold0278 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 6963 - 7004
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatct 303  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  6963 tcatcatcttataataatataacaacaacatattcatcatct 7004  T

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Target: scaffold0116 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 44480 - 44439
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatct 303  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  44480 tcatcatcttataataatataacaacaacatattcatcatct 44439  T

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Target: scaffold0116; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 44545 - 44504
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatct 303  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  44545 tcatcatcttataataatataacaacaacatattcatcatct 44504  T

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Target: scaffold0043 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 9072 - 9113
Alignment:
Q  262 tcatcttcttatattaatataacaacaacgtattcatcatct 303  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  9072 tcatcatcttataataatataacaacaacatattcatcatct 9113  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 153840 - 153803
Alignment:
Q  8 ttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  153840 ttaacaactcatagatgacatcatgtaatcatcatcac 153803  T

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Target: scaffold1427 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 244 - 288
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  244 agtacatttaacaactcatagataacatcacataatcatcatcac 288  T

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Target: scaffold0842 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5286 - 5330
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  5286 agtacatttaacaactcatagataacatcacataatcatcatcac 5330  T

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Target: scaffold0337 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10856 - 10812
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  10856 agtacatttaacaactcatagataacatcacataatcatcatcac 10812  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 109645 - 109689
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  109645 agtacatttaacaactcatagataacatcacataatcatcatcac 109689  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 224177 - 224133
Alignment:
Q  1 agtacacttaacaactcatagatatcatcatgtaatcatcatcac 45  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||    
T  224177 agtacatttaacaactcatagataacatcacataatcatcatcac 224133  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 362226 - 362266
Alignment:
Q  268 tcttatattaatataacaacaacgtattcatcatcttataa 308  Q
    ||||||| ||||||||||||||| |||||||||||| ||||    
T  362226 tcttataataatataacaacaacatattcatcatctcataa 362266  T

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