View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2170_high_6 (Length: 238)

Name: NF2170_high_6
Description: NF2170
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2170_high_6
NF2170_high_6
[»] scaffold0140 (1 HSPs)
scaffold0140 (85-223)||(33893-34031)
[»] chr8 (25 HSPs)
chr8 (87-161)||(6849255-6849329)
chr8 (92-161)||(44380613-44380682)
chr8 (96-164)||(12697716-12697784)
chr8 (102-161)||(36497664-36497723)
chr8 (87-161)||(6004947-6005021)
chr8 (87-161)||(12045647-12045721)
chr8 (96-161)||(9985681-9985746)
chr8 (106-161)||(14531624-14531679)
chr8 (87-149)||(30578269-30578331)
chr8 (99-161)||(35500959-35501021)
chr8 (99-161)||(40380284-40380346)
chr8 (92-154)||(40464966-40465028)
chr8 (96-161)||(6161951-6162016)
chr8 (99-164)||(14228707-14228772)
chr8 (96-161)||(21648934-21648999)
chr8 (92-161)||(27630900-27630969)
chr8 (120-161)||(31731450-31731491)
chr8 (93-154)||(33415711-33415772)
chr8 (92-161)||(37562140-37562209)
chr8 (96-161)||(42012593-42012658)
chr8 (93-148)||(145767-145823)
chr8 (93-149)||(1332468-1332524)
chr8 (100-160)||(22999559-22999619)
chr8 (93-161)||(34996360-34996428)
chr8 (93-161)||(42443107-42443175)
[»] chr5 (29 HSPs)
chr5 (87-161)||(29803228-29803302)
chr5 (92-166)||(41460114-41460188)
chr5 (93-161)||(17063868-17063936)
chr5 (87-161)||(7144580-7144654)
chr5 (95-149)||(38690968-38691022)
chr5 (92-161)||(26627333-26627402)
chr5 (87-166)||(15639383-15639462)
chr5 (92-142)||(3960168-3960218)
chr5 (96-166)||(12718383-12718453)
chr5 (92-161)||(582866-582935)
chr5 (92-161)||(5996670-5996739)
chr5 (92-149)||(19437272-19437329)
chr5 (89-161)||(16292245-16292316)
chr5 (99-154)||(32379935-32379990)
chr5 (96-166)||(12779609-12779679)
chr5 (99-161)||(14914375-14914437)
chr5 (87-161)||(20040792-20040865)
chr5 (87-161)||(34428163-34428237)
chr5 (96-161)||(1107984-1108049)
chr5 (92-161)||(2456029-2456098)
chr5 (99-160)||(3154649-3154710)
chr5 (96-161)||(6538873-6538938)
chr5 (96-161)||(8897385-8897450)
chr5 (92-161)||(18638824-18638893)
chr5 (92-161)||(31025004-31025073)
chr5 (92-161)||(34400621-34400690)
chr5 (96-161)||(36572694-36572759)
chr5 (93-134)||(39032821-39032862)
chr5 (93-161)||(34952406-34952474)
[»] chr4 (35 HSPs)
chr4 (87-161)||(44272804-44272878)
chr4 (93-161)||(11012144-11012212)
chr4 (93-161)||(42853942-42854010)
chr4 (93-166)||(23220333-23220406)
chr4 (99-161)||(3475872-3475934)
chr4 (87-161)||(18874916-18874989)
chr4 (87-161)||(23094379-23094453)
chr4 (95-161)||(35017156-35017222)
chr4 (107-161)||(47014942-47014996)
chr4 (87-161)||(54801001-54801075)
chr4 (93-154)||(8455871-8455932)
chr4 (96-161)||(41609682-41609747)
chr4 (96-161)||(51039119-51039184)
chr4 (118-166)||(12074470-12074518)
chr4 (96-160)||(37775430-37775494)
chr4 (85-161)||(46566932-46567008)
chr4 (99-166)||(925068-925135)
chr4 (125-164)||(52430877-52430916)
chr4 (92-166)||(14090049-14090123)
chr4 (96-166)||(25523201-25523271)
chr4 (100-154)||(25936250-25936304)
chr4 (92-166)||(34114116-34114190)
chr4 (127-161)||(45764422-45764456)
chr4 (96-165)||(51908577-51908647)
chr4 (96-161)||(12241061-12241126)
chr4 (98-163)||(12694433-12694498)
chr4 (93-166)||(18568815-18568888)
chr4 (92-149)||(18880800-18880857)
chr4 (96-161)||(22071499-22071564)
chr4 (95-136)||(24337358-24337399)
chr4 (96-161)||(33820339-33820404)
chr4 (92-161)||(46912798-46912867)
chr4 (96-161)||(53781840-53781904)
chr4 (92-164)||(40308441-40308513)
chr4 (93-161)||(52456927-52456994)
[»] chr3 (36 HSPs)
chr3 (92-166)||(37134605-37134679)
chr3 (87-161)||(45150260-45150334)
chr3 (87-161)||(7867705-7867779)
chr3 (87-161)||(36869831-36869905)
chr3 (92-161)||(36799401-36799470)
chr3 (85-141)||(40785691-40785747)
chr3 (99-166)||(50280093-50280160)
chr3 (87-161)||(1295335-1295409)
chr3 (87-161)||(1901920-1901994)
chr3 (87-161)||(1911366-1911440)
chr3 (95-161)||(28300650-28300716)
chr3 (92-161)||(462400-462469)
chr3 (92-161)||(12094388-12094457)
chr3 (95-166)||(14957834-14957905)
chr3 (87-166)||(50294106-50294185)
chr3 (87-161)||(275229-275303)
chr3 (87-161)||(41717266-41717340)
chr3 (87-161)||(45528936-45529010)
chr3 (96-166)||(51464275-51464345)
chr3 (92-161)||(7213-7282)
chr3 (93-154)||(622460-622521)
chr3 (93-154)||(32981121-32981182)
chr3 (92-149)||(35425671-35425728)
chr3 (92-141)||(42102260-42102309)
chr3 (93-142)||(43333670-43333719)
chr3 (92-161)||(43900756-43900825)
chr3 (96-161)||(47988488-47988553)
chr3 (96-161)||(47997775-47997840)
chr3 (96-161)||(48007062-48007127)
chr3 (92-161)||(52678576-52678645)
chr3 (93-161)||(27198160-27198228)
chr3 (93-161)||(34628070-34628138)
chr3 (114-154)||(35987258-35987298)
chr3 (93-141)||(42755678-42755726)
chr3 (93-161)||(44334801-44334869)
chr3 (102-142)||(55196530-55196570)
[»] chr1 (40 HSPs)
chr1 (92-166)||(20268512-20268586)
chr1 (93-161)||(30530574-30530642)
chr1 (87-161)||(40238441-40238515)
chr1 (87-160)||(5043096-5043169)
chr1 (92-161)||(23554754-23554823)
chr1 (93-161)||(31184284-31184352)
chr1 (87-167)||(32821632-32821712)
chr1 (93-161)||(34395919-34395987)
chr1 (93-153)||(47138030-47138090)
chr1 (93-161)||(50118896-50118964)
chr1 (87-161)||(9882653-9882727)
chr1 (87-161)||(25702209-25702283)
chr1 (87-161)||(30687055-30687129)
chr1 (96-166)||(31703481-31703551)
chr1 (92-161)||(43640984-43641051)
chr1 (92-161)||(7078499-7078568)
chr1 (92-161)||(30530398-30530467)
chr1 (92-136)||(44950420-44950464)
chr1 (92-164)||(48576504-48576576)
chr1 (93-165)||(52417530-52417602)
chr1 (93-148)||(18954300-18954355)
chr1 (87-142)||(51168762-51168817)
chr1 (99-161)||(18610776-18610838)
chr1 (87-141)||(21255779-21255833)
chr1 (96-134)||(24158680-24158718)
chr1 (87-161)||(25988978-25989052)
chr1 (87-161)||(27352633-27352707)
chr1 (95-161)||(33675903-33675969)
chr1 (87-136)||(6954310-6954359)
chr1 (92-161)||(11097883-11097952)
chr1 (96-161)||(18541054-18541119)
chr1 (92-161)||(26547237-26547306)
chr1 (96-161)||(30439253-30439318)
chr1 (85-142)||(34941912-34941969)
chr1 (87-164)||(36930748-36930824)
chr1 (92-161)||(49596238-49596307)
chr1 (93-161)||(12999822-12999890)
chr1 (93-161)||(48872382-48872450)
chr1 (93-161)||(51037980-51038048)
chr1 (93-164)||(51172307-51172376)
[»] chr7 (31 HSPs)
chr7 (92-161)||(37392046-37392115)
chr7 (87-168)||(26123362-26123444)
chr7 (85-161)||(4971293-4971369)
chr7 (93-166)||(40760770-40760841)
chr7 (92-161)||(22692087-22692156)
chr7 (93-166)||(28109955-28110028)
chr7 (87-164)||(34304672-34304749)
chr7 (92-161)||(45154539-45154607)
chr7 (93-161)||(40693528-40693596)
chr7 (87-142)||(44187713-44187768)
chr7 (87-161)||(8061738-8061812)
chr7 (96-166)||(42640841-42640911)
chr7 (92-161)||(26153649-26153717)
chr7 (92-161)||(44564722-44564790)
chr7 (92-160)||(5724042-5724110)
chr7 (92-164)||(5868301-5868373)
chr7 (93-137)||(43107637-43107681)
chr7 (95-142)||(5978601-5978648)
chr7 (87-165)||(18925991-18926067)
chr7 (95-161)||(28824506-28824572)
chr7 (96-161)||(30769664-30769727)
chr7 (99-161)||(37385239-37385301)
chr7 (92-142)||(46148188-46148238)
chr7 (107-161)||(47530305-47530359)
chr7 (92-161)||(16567319-16567388)
chr7 (92-161)||(16598274-16598343)
chr7 (92-161)||(17500700-17500769)
chr7 (92-161)||(17552445-17552514)
chr7 (96-161)||(19426583-19426648)
chr7 (96-136)||(35098785-35098825)
chr7 (106-154)||(46456647-46456695)
[»] chr6 (14 HSPs)
chr6 (93-161)||(12044335-12044403)
chr6 (87-161)||(9188938-9189012)
chr6 (87-161)||(32729892-32729966)
chr6 (87-154)||(30744247-30744314)
chr6 (96-148)||(14803376-14803428)
chr6 (85-161)||(20712070-20712145)
chr6 (98-161)||(35077126-35077190)
chr6 (99-161)||(6435039-6435101)
chr6 (99-161)||(29376721-29376783)
chr6 (92-161)||(11785358-11785427)
chr6 (96-161)||(21506339-21506404)
chr6 (93-161)||(8173312-8173380)
chr6 (92-136)||(18792431-18792475)
chr6 (125-161)||(32621804-32621840)
[»] chr2 (29 HSPs)
chr2 (87-161)||(1052490-1052564)
chr2 (96-161)||(9202519-9202584)
chr2 (96-161)||(36816419-36816484)
chr2 (87-142)||(6742404-6742459)
chr2 (95-161)||(14713989-14714055)
chr2 (87-161)||(23358573-23358647)
chr2 (87-161)||(30856810-30856884)
chr2 (87-161)||(36763518-36763591)
chr2 (106-160)||(43621961-43622015)
chr2 (116-161)||(3299128-3299173)
chr2 (93-161)||(546385-546453)
chr2 (93-161)||(7497991-7498059)
chr2 (92-164)||(35965575-35965647)
chr2 (87-161)||(8352838-8352912)
chr2 (92-142)||(14954598-14954648)
chr2 (87-161)||(15283244-15283318)
chr2 (92-166)||(28165127-28165201)
chr2 (96-149)||(39147780-39147834)
chr2 (92-161)||(2308321-2308390)
chr2 (92-161)||(3959897-3959966)
chr2 (96-161)||(6746220-6746285)
chr2 (119-168)||(22303199-22303248)
chr2 (92-161)||(42554779-42554848)
chr2 (92-136)||(4842519-4842563)
chr2 (93-161)||(6666023-6666091)
chr2 (92-132)||(9449414-9449454)
chr2 (118-154)||(20508384-20508420)
chr2 (93-164)||(27939157-27939229)
chr2 (93-161)||(37966588-37966655)
[»] scaffold0024 (1 HSPs)
scaffold0024 (92-161)||(60472-60541)
[»] scaffold0002 (1 HSPs)
scaffold0002 (87-161)||(440721-440795)
[»] scaffold0662 (1 HSPs)
scaffold0662 (107-161)||(1081-1135)
[»] scaffold0003 (1 HSPs)
scaffold0003 (87-161)||(337121-337195)
[»] scaffold0252 (1 HSPs)
scaffold0252 (119-163)||(8001-8045)
[»] scaffold0041 (1 HSPs)
scaffold0041 (95-161)||(34411-34477)
[»] scaffold0020 (1 HSPs)
scaffold0020 (92-166)||(155904-155978)
[»] scaffold0154 (1 HSPs)
scaffold0154 (92-161)||(4318-4387)
[»] scaffold0511 (1 HSPs)
scaffold0511 (92-136)||(11666-11710)


Alignment Details
Target: scaffold0140 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 85 - 223
Target Start/End: Original strand, 33893 - 34031
Alignment:
Q  85 atagtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaagagatttagcaaaccatt 184  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33893 atagtaggattataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttctagagatttagcaaaccatt 33992  T
Q  185 tctctatgtcaaaaattgaagaggtggttacgtagtgtg 223  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33993 tctctatgtcaaaaattgaagaggtggttacgtagtgtg 34031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 2e-20; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 6849255 - 6849329
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||| |||||||||||||||||| |||||||||||| ||||| ||||||||||| ||||||    
T  6849255 agtaagaatataatgtgagtatgaaagataaagttgtctaaaagttgtcacaaaatggttgtataaatatcattt 6849329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 44380613 - 44380682
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| ||||| ||| ||||||||||||| ||||||| ||||| |||||| |||| ||||||    
T  44380613 gaatataatgtgagtatgagagagaaagttgtttaaaggttgtcacaaaatggttgtacaaatatcattt 44380682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 12697716 - 12697784
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttc 164  Q
    ||||||||| | ||| ||| ||||||||| |||| || ||||||||||||||||||||| |||||||||    
T  12697716 ataatgtgagtgtgagagagaaagttgttcaaaaattatcataaaatagttgtataaatatcatttttc 12697784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 36497723 - 36497664
Alignment:
Q  102 tgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||| ||| |||||||| |||||||||||| |||||||||||| |||| ||||||    
T  36497723 tgaatatgagagagaaagttgtctaaaagttgtcacaaaatagttgtacaaatatcattt 36497664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 6005021 - 6004947
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||| ||||| ||| |||||||| ||||| |||||| ||| |||||||| |||| ||||||    
T  6005021 agtaagaatataatgtgagtatgagagagaaagttgtctaaaaattgtcacaaagtagttgtacaaatatcattt 6004947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 12045647 - 12045721
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||| ||||| ||| |||||||| ||||||||||||  |||| |||||| |||| ||||||    
T  12045647 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcactaaatggttgtacaaatatcattt 12045721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 9985681 - 9985746
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||| ||||| ||| || ||||| |||||||||||||||||||| |||| |||| ||||||    
T  9985681 ataatgtgagtatgagagagaatgttgtataaaagttgtcataaaatagatgtacaaatatcattt 9985746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 161
Target Start/End: Complemental strand, 14531679 - 14531624
Alignment:
Q  106 tatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||| ||||||||  ||||||| |||||||||||||||| |||| ||||||    
T  14531679 tatgaaagagaaagttgtacaaaagttatcataaaatagttgtacaaatatcattt 14531624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 149
Target Start/End: Complemental strand, 30578331 - 30578269
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgta 149  Q
    |||| |||||||| |||| ||||| | | ||||||||||||||||||||| ||||| ||||||    
T  30578331 agtaagaatataacgtgagtatgagaaagaaagttgtttaaaagttgtcaaaaaatggttgta 30578269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 35500959 - 35501021
Alignment:
Q  99 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||| ||||| |||||||||||||  |||||||||| ||| | ||||||||||| ||||||    
T  35500959 atgtgagtatgagagataaagttgttataaagttgtcaaaaagtggttgtataaatatcattt 35501021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 40380346 - 40380284
Alignment:
Q  99 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||| ||||| ||| ||||||||  ||||||||||||||||||| |||| |||| ||||||    
T  40380346 atgtgagtatgagagagaaagttgtacaaaagttgtcataaaatagatgtacaaatatcattt 40380284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 154
Target Start/End: Complemental strand, 40465028 - 40464966
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaat 154  Q
    ||||||||||||| ||||| ||| ||||||||  |||| || ||||||| |||||||||||||    
T  40465028 gaatataatgtgagtatgagagagaaagttgtcaaaaatttatcataaagtagttgtataaat 40464966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 6162016 - 6161951
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||| ||||||||| | ||||||  ||| ||||||||||||| |||||| |||| ||||||    
T  6162016 ataatgtgagtatgaaagagagagttgtcaaaaggttgtcataaaatggttgtacaaatatcattt 6161951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 14228772 - 14228707
Alignment:
Q  99 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttc 164  Q
    |||||| ||||| ||| ||||||||  ||||||| ||| |||||||||||| |||| |||||||||    
T  14228772 atgtgagtatgagagagaaagttgtacaaaagttatcacaaaatagttgtacaaatatcatttttc 14228707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 21648934 - 21648999
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||| ||||| ||| ||||||||| ||||||||||| ||| | |||||| |||| ||||||    
T  21648934 ataatgtgagtatgagagagaaagttgttaaaaagttgtcacaaattggttgtacaaatatcattt 21648999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 27630969 - 27630900
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| ||||| ||| ||||||||  |||| |||||||||||| | |||| |||| ||||||    
T  27630969 gaatataatgtgagtatgagagagaaagttgtcaaaaaattgtcataaaatggatgtacaaatatcattt 27630900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 31731450 - 31731491
Alignment:
Q  120 ttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||| |||||||||||||| ||||||||||||| ||||||    
T  31731450 ttgtttcaaagttgtcataaattagttgtataaatatcattt 31731491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 154
Target Start/End: Original strand, 33415711 - 33415772
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaat 154  Q
    |||||||||||| ||| ||||| | ||||||  || ||||||||||||||||||||| ||||    
T  33415711 aatataatgtgagtataaaagagagagttgtcaaagagttgtcataaaatagttgtacaaat 33415772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 37562140 - 37562209
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||| ||| || ||||| ||| |||||||| |||||||||||| | |||||||||| |||| ||||||    
T  37562140 gaatatcatgcgagtatgagagagaaagttgtctaaaagttgtcacataatagttgtacaaatatcattt 37562209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 42012593 - 42012658
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| |||| ||||| ||| ||||||||  ||||||| ||||||| ||||||||||||| ||||||    
T  42012593 ataacgtgagtatgagagagaaagttgtcaaaaagttatcataaagtagttgtataaatatcattt 42012658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 145767 - 145823
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtt-taaaagttgtcataaaatagttgt 148  Q
    |||||||| ||||||||||| ||||| ||||  |||||||||||| |||||||||||    
T  145767 aatataatatgaatatgaaacataaaattgtcataaaagttgtcacaaaatagttgt 145823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 1332468 - 1332524
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgta 149  Q
    ||||| |||||||||||||||| ||||||||  |||| |||| ||||||| ||||||    
T  1332468 aatatcatgtgaatatgaaagagaaagttgtcaaaaaattgttataaaatggttgta 1332524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 22999559 - 22999619
Alignment:
Q  100 tgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatt 160  Q
    ||||| ||||||||||||||||||| ||||||||||  |||||| || || |||| |||||    
T  22999559 tgtgagtatgaaagataaagttgttcaaaagttgtcgcaaaataattttaaaaatatcatt 22999619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 34996360 - 34996428
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||||||||||||| ||| ||||||||  |||| |||| ||||| | |||||| |||| ||||||    
T  34996360 aatataatgtgaatatgagagagaaagttgtcaaaaaattgtaataaagtggttgtacaaatatcattt 34996428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 42443175 - 42443107
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||||||| ||||| ||| |||||||| ||||||||||||  ||||  ||||| |||| ||||||    
T  42443175 aatataatgtgagtatgagagagaaagttgtctaaaagttgtcactaaatgattgtacaaatatcattt 42443107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 2e-20; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 29803302 - 29803228
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||| |||| ||||||    
T  29803302 agtaagaatataatgtgaatatgagagagaaagttgtttaaaagttgtcaaaaaatagttgtacaaatatcattt 29803228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 166
Target Start/End: Complemental strand, 41460188 - 41460114
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 166  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||| |||||  |||||||||| |||||| ||||    
T  41460188 gaatataatgtgagtatgagagataaagttgtttaaaagttgtcaaaaaatgattgtataaatatcatttctcaa 41460114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 17063936 - 17063868
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| |||||  ||||| |||| ||||||    
T  17063936 aatataatgtgagtatgagagataaagttgtttaaaagttgtcaaaaaatgattgtacaaatatcattt 17063868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 7144654 - 7144580
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||| ||| ||||| ||| ||||||||||||||||| ||||||||| |||||| |||| ||||||    
T  7144654 agtaagaatataatatgagtatgagagagaaagttgtttaaaagttatcataaaatggttgtacaaatatcattt 7144580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 38690968 - 38691022
Alignment:
Q  95 tataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgta 149  Q
    |||||||||||||||||||| |||||||||||||| |||||| |||||| |||||    
T  38690968 tataatgtgaatatgaaagagaaagttgtttaaaaattgtcacaaaataattgta 38691022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 26627402 - 26627333
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| ||||||||| |||||||| |||||||||  | |||||||||||| |||| ||||||    
T  26627402 gaatataatgtgagtatgaaagagaaagttgtctaaaagttgataaaaaatagttgtacaaatatcattt 26627333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 15639462 - 15639383
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 166  Q
    |||| ||||||||||||| ||||| ||| |||||||| ||||||||||||  |||| |||||| |||| |||||| ||||    
T  15639462 agtaagaatataatgtgagtatgagagaaaaagttgtctaaaagttgtcaccaaatggttgtacaaatatcatttctcaa 15639383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 142
Target Start/End: Original strand, 3960168 - 3960218
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaat 142  Q
    ||||||||||||| ||||| | ||||||||||||||||||||||| |||||    
T  3960168 gaatataatgtgagtatgagatataaagttgtttaaaagttgtcaaaaaat 3960218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 12718383 - 12718453
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 166  Q
    ||||||||||||||| ||||||||||||  ||||||||||| ||| | |||||| |||| |||||| ||||    
T  12718383 ataatgtgaatatgagagataaagttgtcaaaaagttgtcacaaattggttgtacaaatatcatttctcaa 12718453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 582866 - 582935
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||| ||| ||||| ||| ||| ||||||||||||| ||| |||||||||||| |||| ||||||    
T  582866 gaatataatatgagtatgagagagaaaattgtttaaaagttatcacaaaatagttgtaaaaatatcattt 582935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 5996739 - 5996670
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||||||||| ||| ||| |||| ||||| |||| | |||||||||||| |||| ||||||    
T  5996739 gaatataatgtgaatatgagagagaaaattgtctaaaaattgttaaaaaatagttgtacaaatatcattt 5996670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 19437329 - 19437272
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgta 149  Q
    ||||||||||||||||||| ||| ||||||||||||| ||| ||| ||||| ||||||    
T  19437329 gaatataatgtgaatatgagagagaaagttgtttaaaggttatcacaaaatggttgta 19437272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 16292245 - 16292316
Alignment:
Q  89 taggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||||||||| | ||||||||| ||||||||| ||||||| |||| ||||| ||||| |||| ||||||    
T  16292245 taggaatataatgtaagtatgaaagagaaagttgttaaaaagttatcat-aaataattgtacaaatatcattt 16292316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 154
Target Start/End: Original strand, 32379935 - 32379990
Alignment:
Q  99 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaat 154  Q
    |||||| ||||| ||| ||||||||| ||||||||||||||| |||||||| ||||    
T  32379935 atgtgagtatgagagagaaagttgttcaaaagttgtcataaactagttgtacaaat 32379990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 12779609 - 12779679
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 166  Q
    ||||||||| ||||| ||||||||||||  ||||||||||| ||| | |||||| |||| |||||| ||||    
T  12779609 ataatgtgagtatgagagataaagttgtcaaaaagttgtcacaaattggttgtacaaatatcatttctcaa 12779679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 14914437 - 14914375
Alignment:
Q  99 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||| |||| ||||||||  ||||||||||| ||||| |||||| |||| ||||||    
T  14914437 atgtgaatatgtaagagaaagttgtccaaaagttgtcacaaaatggttgtacaaatatcattt 14914375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 20040865 - 20040792
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||| ||||||| | |||||||| ||||||||||||  |||| |||||| |||| ||||||    
T  20040865 agtaagaatataatgtgagtatgaaaaagaaagttgtgtaaaagttgtcactaaat-gttgtacaaatatcattt 20040792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 34428237 - 34428163
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| |||| |||||||| ||| | | | |||||||| |||||||||||| |||||||||||| |||| ||||||    
T  34428237 agtaagaatctaatgtgagtataagaaaaaaagttgtctaaaagttgtcaaaaaatagttgtacaaatatcattt 34428163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 1108049 - 1107984
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||| ||||| ||||||||||||  ||||||||| | |||||||| ||| |||| ||||||    
T  1108049 ataatgtgagtatgagagataaagttgtacaaaagttgtaacaaaatagtcgtacaaatatcattt 1107984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 2456098 - 2456029
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| ||||| | | ||||||||  |||| |||| |||||||||||||||| || ||||||    
T  2456098 gaatataatgtgagtatgagatagaaagttgtcaaaaaattgttataaaatagttgtatagatatcattt 2456029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 3154649 - 3154710
Alignment:
Q  99 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatt 160  Q
    |||||| ||||| ||| ||||||||  ||||||| |||||||||||||||| |||| |||||    
T  3154649 atgtgattatgagagagaaagttgtacaaaagttatcataaaatagttgtacaaatatcatt 3154710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 6538938 - 6538873
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||||||||| ||||||||  |||| || ||| |||||| ||||| |||| ||||||    
T  6538938 ataatgtgaatatgaaagagaaagttgtcaaaaaattatcacaaaataattgtacaaatatcattt 6538873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 8897450 - 8897385
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||| ||||||||| | ||||||  ||| ||||||||||||| |||||| |||| ||||||    
T  8897450 ataatgtgagtatgaaagagagagttgtcaaaaggttgtcataaaatggttgtacaaatatcattt 8897385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 18638824 - 18638893
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| ||||| ||||||| ||||  ||||||||| ||||||| |||||  |||| ||||||    
T  18638824 gaatataatgtgagtatgagagataaatttgtcaaaaagttgtaataaaatggttgtgcaaatatcattt 18638893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 31025004 - 31025073
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| ||||| ||| ||||||||| |||| |||||||||  | |||||| |||| ||||||    
T  31025004 gaatataatgtgagtatgagagagaaagttgttaaaaaattgtcataatgtggttgtacaaatatcattt 31025073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 34400690 - 34400621
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| ||||| ||| || |||||| |||| ||||||||||||  ||||| |||| ||||||    
T  34400690 gaatataatgtgagtatgagagagaaggttgttaaaaaattgtcataaaatgattgtacaaatatcattt 34400621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 36572759 - 36572694
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||| ||||||||| | ||||||  ||||||||||| ||||||||| || |||| ||||||    
T  36572759 ataatgtgagtatgaaagagagagttgtcaaaaagttgtcacaaaatagttatacaaatatcattt 36572694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 39032821 - 39032862
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgt 134  Q
    |||||||| ||| ||||||| |||||||||||||||||||||    
T  39032821 aatataatatgagtatgaaaaataaagttgtttaaaagttgt 39032862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 34952406 - 34952474
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||||||||||||| ||| ||||||||  ||| ||||| ||||| | |||||| |||| ||||||    
T  34952406 aatataatgtgaatatgagagagaaagttgtgaaaatgttgtaataaagtggttgtacaaatatcattt 34952474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 6e-18; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 44272804 - 44272878
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||| ||||| ||| ||||||||||||||||||||| |||||||||||| |||| ||||||    
T  44272804 agtaagaatataatgtgagtatgagagagaaagttgtttaaaagttgtcaaaaaatagttgtacaaatatcattt 44272878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 11012212 - 11012144
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||||| | ||||| ||||||||||||| ||||||||||||||||| |||||| |||| ||||||    
T  11012212 aatataatgtaagtatgagagataaagttgttaaaaagttgtcataaaatggttgtacaaatatcattt 11012144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 42854010 - 42853942
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||||||| ||||| ||| |||||||| |||||||||||| |||||||||||| |||| ||||||    
T  42854010 aatataatgtgagtatgatagagaaagttgtctaaaagttgtcaaaaaatagttgtacaaatatcattt 42853942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 23220406 - 23220333
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 166  Q
    |||||||||||| ||| | |||||||||| |||||||||||||| ||||| |||||| |||| |||||| ||||    
T  23220406 aatataatgtgagtataagagataaagttatttaaaagttgtcaaaaaatggttgtacaaatatcatttctcaa 23220333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 3475934 - 3475872
Alignment:
Q  99 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||||||| ||| ||||||||  ||||||||||||||||| |||||| |||| ||||||    
T  3475934 atgtgaatatgagagagaaagttgtacaaaagttgtcataaaatggttgtacaaatatcattt 3475872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 18874916 - 18874989
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||||| |||||| |||| ||||||    
T  18874916 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcaaaaaat-gttgtacaaatatcattt 18874989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 23094453 - 23094379
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||| ||||||||||| |||||||| |||||||| ||| |||||  ||||| |||| ||||||    
T  23094453 agtaagaatataatgtaaatatgaaagagaaagttgtctaaaagttatcacaaaatgattgtacaaatatcattt 23094379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 161
Target Start/End: Complemental strand, 35017222 - 35017156
Alignment:
Q  95 tataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||| | ||||| ||||||||||||  ||||||||||| |||||||||||| |||| ||||||    
T  35017222 tataatgttagtatgagagataaagttgtaaaaaagttgtcacaaaatagttgtacaaatatcattt 35017156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 47014996 - 47014942
Alignment:
Q  107 atgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||| ||||||||||||||||||||| |||||||||||| |||| ||||||    
T  47014996 atgagagagaaagttgtttaaaagttgtcacaaaatagttgtacaaatatcattt 47014942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 54801075 - 54801001
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||| ||||||||||||| |||| |||||||| ||| ||| | |||||| |||| ||||||    
T  54801075 agtaagaatataatgtgagtatgaaagataaaattgtctaaaagttatcacaaagtggttgtacaaatatcattt 54801001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 154
Target Start/End: Complemental strand, 8455932 - 8455871
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaat 154  Q
    |||||||||||| ||| | ||| ||||||||| ||||||||||| |||||||||||| ||||    
T  8455932 aatataatgtgagtattagagagaaagttgttcaaaagttgtcacaaaatagttgtacaaat 8455871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 41609682 - 41609747
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||| ||||| ||||||||||||  ||||||||||||||||| | |||| |||| ||||||    
T  41609682 ataatgtgagtatgagagataaagttgtacaaaagttgtcataaaatggatgtacaaatatcattt 41609747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 51039119 - 51039184
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||| ||||| ||||||||||||  ||||||||||| ||| |||||||| |||| ||||||    
T  51039119 ataatgtgattatgagagataaagttgtcaaaaagttgtcacaaagtagttgtacaaatatcattt 51039184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 12074518 - 12074470
Alignment:
Q  118 agttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 166  Q
    ||||||| |||| || ||||||||||||||||||||| |||||||||||    
T  12074518 agttgttcaaaaattatcataaaatagttgtataaatatcatttttcaa 12074470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 37775430 - 37775494
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatt 160  Q
    ||||||||  ||||||||| ||||||||  ||||||||| |||||||||||||| |||| |||||    
T  37775430 ataatgtgtgtatgaaagagaaagttgtacaaaagttgtaataaaatagttgtagaaatatcatt 37775494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 161
Target Start/End: Complemental strand, 46567008 - 46566932
Alignment:
Q  85 atagtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||| | | |||| |||| ||||||    
T  46567008 atagtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaagtggatgtacaaatatcattt 46566932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 925068 - 925135
Alignment:
Q  99 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 166  Q
    |||||| ||||| ||| ||| |||| |||||||||||| ||||| ||||||||||| |||||| ||||    
T  925068 atgtgagtatgagagagaaaattgtctaaaagttgtcacaaaatggttgtataaatatcatttatcaa 925135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 164
Target Start/End: Complemental strand, 52430916 - 52430877
Alignment:
Q  125 taaaagttgtcataaaatagttgtataaatgtcatttttc 164  Q
    ||||||||||||||||||||||||| |||| |||||||||    
T  52430916 taaaagttgtcataaaatagttgtacaaatatcatttttc 52430877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 166
Target Start/End: Original strand, 14090049 - 14090123
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 166  Q
    |||| |||||||| ||||| ||| |||||||||||||||||||   ||||| |||| |||||| |||||| ||||    
T  14090049 gaatctaatgtgagtatgagagagaaagttgtttaaaagttgtacaaaaatggttggataaatatcatttctcaa 14090123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 25523201 - 25523271
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 166  Q
    ||||||||| ||||| ||| ||||||||  ||||||||| | |||||||||||| |||| |||||| ||||    
T  25523201 ataatgtgagtatgagagagaaagttgtcaaaaagttgtgagaaaatagttgtacaaatatcatttctcaa 25523271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 154
Target Start/End: Complemental strand, 25936304 - 25936250
Alignment:
Q  100 tgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaat 154  Q
    ||||| ||||| ||| ||||||||  ||||||||||| |||||||||||||||||    
T  25936304 tgtgagtatgagagagaaagttgtgcaaaagttgtcaaaaaatagttgtataaat 25936250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 166
Target Start/End: Original strand, 34114116 - 34114190
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 166  Q
    |||||||| |||| ||||| ||| ||||||||  ||||||| | |||||||||||||| |||| |||||| ||||    
T  34114116 gaatataacgtgagtatgagagaaaaagttgtcaaaaagttataataaaatagttgtacaaatatcatttatcaa 34114190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 45764422 - 45764456
Alignment:
Q  127 aaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||||||||||||||||||||||| ||||||    
T  45764422 aaagttgtcataaaatagttgtataaatatcattt 45764456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 165
Target Start/End: Original strand, 51908577 - 51908647
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgt-ttaaaagttgtcataaaatagttgtataaatgtcatttttca 165  Q
    ||||||||||||||||||| ||||||||  | |||||||||| ||| || ||||| |||| ||||||||||    
T  51908577 ataatgtgaatatgaaagagaaagttgtcattaaagttgtcacaaattaattgtacaaatatcatttttca 51908647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 12241126 - 12241061
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||| ||||| ||| ||||||||  ||||||||| | |||||||||||| |||| ||||||    
T  12241126 ataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcattt 12241061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 12694433 - 12694498
Alignment:
Q  98 aatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattttt 163  Q
    ||||||||||||| ||| |||||| |  ||||||||||| ||||| |||||| |||| ||||||||    
T  12694433 aatgtgaatatgagagagaaagttatcaaaaagttgtcacaaaatggttgtacaaatatcattttt 12694498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 18568815 - 18568888
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 166  Q
    ||||| |||||| ||| | ||| ||||||||  ||||||||||| ||||| ||||||||||| |||||| ||||    
T  18568815 aatatcatgtgagtataagagaaaaagttgtccaaaagttgtcacaaaatggttgtataaatatcatttctcaa 18568888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 18880857 - 18880800
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgta 149  Q
    ||||||||||||| ||||| ||| ||| |||| |||||||| ||||||||| ||||||    
T  18880857 gaatataatgtgagtatgagagagaaaattgtctaaaagttatcataaaattgttgta 18880800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 22071564 - 22071499
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||||||||| | ||||||  |||||||||||  ||||| ||||| |||| ||||||    
T  22071564 ataatgtgaatatgaaagagatagttgtcaaaaagttgtcactaaataattgtacaaatatcattt 22071499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 136
Target Start/End: Original strand, 24337358 - 24337399
Alignment:
Q  95 tataatgtgaatatgaaagataaagttgtttaaaagttgtca 136  Q
    |||||||||| ||||| ||||||||||||| |||||||||||    
T  24337358 tataatgtgagtatgagagataaagttgttaaaaagttgtca 24337399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 33820339 - 33820404
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||| ||||| ||| ||||||||  ||||||||| | |||||||||||| |||| ||||||    
T  33820339 ataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcattt 33820404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 46912798 - 46912867
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| ||||| ||| ||||||||| |||| |||| ||||| | |||||| |||| ||||||    
T  46912798 gaatataatgtgagtatgagagagaaagttgttaaaaaattgtaataaagtggttgtacaaatatcattt 46912867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 53781840 - 53781904
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||| ||||||||| ||| |||| |||||||||| | |||||||||||| |||| ||||||    
T  53781840 ataatgtgagtatgaaagagaaaattgtataaaagttgt-acaaaatagttgtacaaatatcattt 53781904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 40308513 - 40308441
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttc 164  Q
    ||||||||||||| ||||||||| ||||||||  |||| || | |||||||  ||||| |||| |||||||||    
T  40308513 gaatataatgtgagtatgaaagagaaagttgtcaaaaaattattataaaatgattgtacaaatatcatttttc 40308441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 52456927 - 52456994
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||||||| ||||| ||| ||| |||| |||||||||||| |||||| ||||| |||| ||||||    
T  52456927 aatataatgtgagtatgagagagaaaattgtctaaaagttgtcaaaaaata-ttgtacaaatatcattt 52456994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 6e-18; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 166
Target Start/End: Original strand, 37134605 - 37134679
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 166  Q
    ||||||||| ||||||||||||| ||||||||| |||| ||||||||||||||||||| |||| |||||| ||||    
T  37134605 gaatataatatgaatatgaaagagaaagttgttaaaaaattgtcataaaatagttgtacaaatatcatttctcaa 37134679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 45150260 - 45150334
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||||||||||||||| | ||||||    
T  45150260 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaaatagttgtataagtatcattt 45150334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 7867705 - 7867779
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||| ||||| | | ||| ||||||||||||||||| |||||||||||| |||| ||||||    
T  7867705 agtaagaatataatgtgagtatgagaaagaaaattgtttaaaagttgtcacaaaatagttgtacaaatatcattt 7867779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 36869831 - 36869905
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||||| |||||| |||| ||||||    
T  36869831 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcaaaaaatggttgtacaaatatcattt 36869905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 36799470 - 36799401
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| ||||| | ||||| ||||||||||||| ||| |||||||||||| |||| ||||||    
T  36799470 gaatataatgtgagtatgagaaataaaattgtttaaaagttatcaaaaaatagttgtacaaatatcattt 36799401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 40785691 - 40785747
Alignment:
Q  85 atagtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaa 141  Q
    |||||| ||||||||||||| ||||| ||| ||||||||||||||||||||| ||||    
T  40785691 atagtaagaatataatgtgagtatgagagagaaagttgtttaaaagttgtcaaaaaa 40785747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 50280093 - 50280160
Alignment:
Q  99 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 166  Q
    |||||||||||||||| ||||||||  ||||||||||||| ||| |||||| |||| |||||| ||||    
T  50280093 atgtgaatatgaaagagaaagttgtacaaaagttgtcatagaatggttgtacaaatatcatttctcaa 50280160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 1295409 - 1295335
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||| ||||| ||| ||||||||  ||||||| ||| |||||||||||| |||| ||||||    
T  1295409 agtaagaatataatgtgagtatgagagaaaaagttgtccaaaagttatcacaaaatagttgtacaaatatcattt 1295335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 1901920 - 1901994
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||| | |||||| |||| ||||||    
T  1901920 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaagtggttgtacaaatatcattt 1901994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 1911366 - 1911440
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||| | |||||| |||| ||||||    
T  1911366 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaagtggttgtacaaatatcattt 1911440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 161
Target Start/End: Original strand, 28300650 - 28300716
Alignment:
Q  95 tataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||| ||||||||| ||| ||||||||| ||||||||||||||| | |||||| |||| ||||||    
T  28300650 tataatatgaatatgagagagaaagttgttaaaaagttgtcataaagtggttgtacaaatatcattt 28300716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 462400 - 462469
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||| |||| ||||| ||| |||||||| |||||||||||| ||||| |||||| |||| ||||||    
T  462400 gaatataacgtgagtatgagagagaaagttgtctaaaagttgtcacaaaatggttgtacaaatatcattt 462469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 12094388 - 12094457
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| ||||| ||| | | || || |||| |||||||||||||||||||||||| ||||||    
T  12094388 gaatataatgtgagtatgagagagacattttttaaaaaattgtcataaaatagttgtataaatatcattt 12094457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 14957905 - 14957834
Alignment:
Q  95 tataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 166  Q
    |||||||||||||||| ||| ||| ||||| ||||||||||| ||| | |||||| |||| |||||| ||||    
T  14957905 tataatgtgaatatgagagaaaaaattgttaaaaagttgtcacaaagtggttgtacaaatatcatttctcaa 14957834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 50294106 - 50294185
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 166  Q
    |||| ||||||||||||| | ||| ||||||| ||||||||||||||||  ||| | |||||| |||| |||||| ||||    
T  50294106 agtaagaatataatgtgagtgtgagagataaaattgtttaaaagttgtcgcaaagtggttgtacaaatatcatttctcaa 50294185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 275303 - 275229
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||| |||| |||| |||||| ||||||||||||||  ||||  ||||| |||| ||||||    
T  275303 agtaagaatataatgtgagtatggaagagaaagttttttaaaagttgtcaataaatgattgtacaaatatcattt 275229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 41717340 - 41717266
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| |||||||| |||| ||||| | | |||||||||||||||||||||  ||||| ||||| |||| ||||||    
T  41717340 agtaagaatataacgtgagtatgagatagaaagttgtttaaaagttgtcactaaataattgtacaaatatcattt 41717266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 45528936 - 45529010
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| |||| |||||||| ||||| | | ||| |||| |||||||||||| |||||||||||| |||| ||||||    
T  45528936 agtaagaatctaatgtgagtatgagaaagaaatttgtctaaaagttgtcaaaaaatagttgtacaaatatcattt 45529010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 51464275 - 51464345
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 166  Q
    ||||||||| ||||| ||||||||||||  ||||||||||| ||| | |||||| |||| |||||| ||||    
T  51464275 ataatgtgagtatgagagataaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctcaa 51464345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 7213 - 7282
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| ||||| ||| ||||||||  ||||||||||| |||||  ||||| |||| ||||||    
T  7213 gaatataatgtgagtatgagagagaaagttgtccaaaagttgtcagaaaatgattgtacaaatatcattt 7282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 154
Target Start/End: Original strand, 622460 - 622521
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaat 154  Q
    |||||||||||| ||||| ||| ||||||||  ||||||||| ||||||| |||||| ||||    
T  622460 aatataatgtgagtatgagagagaaagttgtcaaaaagttgtaataaaatggttgtacaaat 622521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 154
Target Start/End: Original strand, 32981121 - 32981182
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaat 154  Q
    |||||||||||| ||||| ||| |||||||| ||||||||||||  |||| |||||| ||||    
T  32981121 aatataatgtgagtatgagagagaaagttgtctaaaagttgtcactaaatggttgtacaaat 32981182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 149
Target Start/End: Original strand, 35425671 - 35425728
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgta 149  Q
    ||||||||||||| ||||| ||||||||||||  ||||||||| ||||| | ||||||    
T  35425671 gaatataatgtgagtatgagagataaagttgtcaaaaagttgtaataaagtggttgta 35425728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 141
Target Start/End: Complemental strand, 42102309 - 42102260
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaa 141  Q
    ||||||||| ||| ||||  ||||||||||||||||||||||||| ||||    
T  42102309 gaatataatctgagtatgtgagataaagttgtttaaaagttgtcaaaaaa 42102260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 43333670 - 43333719
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaat 142  Q
    |||||||||||| ||||||||| | ||||||  |||||||||||||||||    
T  43333670 aatataatgtgagtatgaaagagagagttgtcaaaaagttgtcataaaat 43333719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 43900756 - 43900825
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| ||||| ||| ||||||||  ||||||||| ||||| | |||||| |||| ||||||    
T  43900756 gaatataatgtgagtatgagagagaaagttgtcaaaaagttgtaataaagtggttgtacaaatatcattt 43900825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 47988488 - 47988553
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||| ||||| ||| ||||||||  ||||||||| | |||||||||||| |||| ||||||    
T  47988488 ataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcattt 47988553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 47997775 - 47997840
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||| ||||| ||| ||||||||  ||||||||| | |||||||||||| |||| ||||||    
T  47997775 ataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcattt 47997840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 48007062 - 48007127
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||| ||||| ||| ||||||||  ||||||||| | |||||||||||| |||| ||||||    
T  48007062 ataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcattt 48007127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 52678576 - 52678645
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||||||||||||| ||||||||  |||| || | | ||| | |||||| |||||||||||    
T  52678576 gaatataatgtgaatatgaaagagaaagttgtcaaaaaattattagaaattggttgtacaaatgtcattt 52678645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 27198160 - 27198228
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||| ||| ||||| ||||||| ||||||||||||| ||| |||||  ||||| |||| ||||||    
T  27198160 aatataatatgagtatgagagataaaattgtttaaaagttatcaaaaaatgattgtacaaatatcattt 27198228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 34628070 - 34628138
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||||||| ||||| | |||||||| | |||||||||| | ||||| |||||| |||| ||||||    
T  34628070 aatataatgtgagtatgagaaataaagttatctaaaagttgttaaaaaatggttgtacaaatatcattt 34628138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 154
Target Start/End: Complemental strand, 35987298 - 35987258
Alignment:
Q  114 ataaagttgtttaaaagttgtcataaaatagttgtataaat 154  Q
    ||||||||||||||||||| ||| |||||||||||| ||||    
T  35987298 ataaagttgtttaaaagttatcacaaaatagttgtacaaat 35987258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 42755726 - 42755678
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaa 141  Q
    |||||||||||| ||||| ||| ||| ||||||||||||||||| ||||    
T  42755726 aatataatgtgagtatgagagagaaaattgtttaaaagttgtcaaaaaa 42755678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 44334801 - 44334869
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||||||| ||||| ||| ||||||||  ||||||||| ||||| | |||||| |||| ||||||    
T  44334801 aatataatgtgagtatgagagagaaagttgtcaaaaagttgtaataaagtggttgtacaaatatcattt 44334869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 55196530 - 55196570
Alignment:
Q  102 tgaatatgaaagataaagttgtttaaaagttgtcataaaat 142  Q
    ||||||||| ||||||| ||||| |||||||||||||||||    
T  55196530 tgaatatgagagataaaattgttaaaaagttgtcataaaat 55196570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 6e-18; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 166
Target Start/End: Original strand, 20268512 - 20268586
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 166  Q
    ||||||||| ||||| ||||||||||||||||| |||| |||| |||||||||||||| |||| |||||||||||    
T  20268512 gaatataatatgaatgtgaaagataaagttgttaaaaaattgttataaaatagttgtacaaatatcatttttcaa 20268586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 30530574 - 30530642
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||||||| ||||| ||| |||||||| |||||||||||| ||||| ||||||||||| ||||||    
T  30530574 aatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaaatggttgtataaatatcattt 30530642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 40238515 - 40238441
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||||||||| ||| ||| ||||||||||||||||| |||||  ||||| |||| ||||||    
T  40238515 agtaagaatataatgtgaatatgagagaaaaaattgtttaaaagttgtcaaaaaatgattgtacaaatatcattt 40238441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 5043169 - 5043096
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatt 160  Q
    |||| ||||||||||||||||||||||| |||||| ||||||| || ||| |||||| ||||| |||| |||||    
T  5043169 agtaagaatataatgtgaatatgaaagagaaagttatttaaaaattatcacaaaataattgtacaaatatcatt 5043096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 23554823 - 23554754
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| ||||| |||||||||||||||||| || ||| ||||| |||||| |||| ||||||    
T  23554823 gaatataatgtgagtatgagagataaagttgtttaaaaattatcaaaaaatggttgtacaaatatcattt 23554754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 31184352 - 31184284
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||| |||  |||| ||||||||||||| ||||||||||||||||| |||||| |||| ||||||    
T  31184352 aatataatttgagcatgagagataaagttgttaaaaagttgtcataaaatggttgtacaaatatcattt 31184284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 167
Target Start/End: Complemental strand, 32821712 - 32821632
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaag 167  Q
    |||| ||||||||||||| ||||| ||| ||| ||||||||||||||||| ||| | |||||| |||| |||||| |||||    
T  32821712 agtaagaatataatgtgagtatgagagagaaaattgtttaaaagttgtcacaaagtggttgtacaaatatcatttctcaag 32821632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 34395919 - 34395987
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||| |||||| ||||| ||| ||||||||| ||||||||||||||||||| |||| |||| ||||||    
T  34395919 aatattatgtgagtatgagagagaaagttgttcaaaagttgtcataaaatagatgtacaaatatcattt 34395987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 153
Target Start/End: Original strand, 47138030 - 47138090
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaa 153  Q
    |||||||||||||||||| | | ||||||||| ||||||| | ||||||||||||||||||    
T  47138030 aatataatgtgaatatgagataaaaagttgttcaaaagttataataaaatagttgtataaa 47138090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 50118896 - 50118964
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||||||||||||| ||||||||||||  ||||||||| ||||| | ||| ||||||| ||||||    
T  50118896 aatataatgtgaatatgagagataaagttgtcaaaaagttgtaataaagtggttatataaatatcattt 50118964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 9882653 - 9882727
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||| ||||| ||||||||| ||||||||||||  ||| ||||||| |||||||||||| |||| ||||||    
T  9882653 agtaagaacataatatgaatatgagagataaagttgtcaaaatgttgtcacaaaatagttgtacaaatatcattt 9882727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 25702209 - 25702283
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||| ||||| |||||||||||| || ||||||| | |||||| ||||| |||| ||||||    
T  25702209 agtaagaatataatgtgagtatgagagataaagttgtctacaagttgttaaaaaataattgtagaaatatcattt 25702283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 30687129 - 30687055
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||| ||||| ||| |||||||| ||||||||||||  |||| |||||| |||| ||||||    
T  30687129 agtaagaatataatgtgagtatgatagaaaaagttgtctaaaagttgtcactaaatggttgtacaaatatcattt 30687055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 31703481 - 31703551
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 166  Q
    ||||||||| ||||| ||| ||||||||| |||| |||||| |||||| |||| ||||| |||||||||||    
T  31703481 ataatgtgagtatgagagagaaagttgttaaaaaattgtcaaaaaataattgtctaaatatcatttttcaa 31703551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 43640984 - 43641051
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||  ||||| |||||||||||||||||||| |||| ||||| |||||| |||| ||||||    
T  43640984 gaatataatgtg--tatgagagataaagttgtttaaaagtagtcaaaaaatggttgtacaaatatcattt 43641051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 7078499 - 7078568
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||| |||||| ||||| ||| ||||||||| ||||||||||| ||||||| |||| |||| ||||||    
T  7078499 gaatattatgtgagtatgagagagaaagttgttcaaaagttgtcacaaaatagatgtacaaatatcattt 7078568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 30530398 - 30530467
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| ||||| ||| ||||||||| ||||||||| ||||| | |||||| |||| ||||||    
T  30530398 gaatataatgtgagtatgagagagaaagttgttaaaaagttgtaataaagtggttgtacaaatatcattt 30530467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 44950420 - 44950464
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtca 136  Q
    ||||||||||||| ||||||||| ||||||||| |||||||||||    
T  44950420 gaatataatgtgagtatgaaagagaaagttgttaaaaagttgtca 44950464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 48576504 - 48576576
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttc 164  Q
    |||||||||| |||||||| ||| |||||| |  ||||||||||||||||| ||| || |||| |||||||||    
T  48576504 gaatataatgcgaatatgagagagaaagttatcaaaaagttgtcataaaatggttatacaaatatcatttttc 48576576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 52417602 - 52417530
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttca 165  Q
    |||||||||||| ||||| ||| ||||||||  ||||||||| ||||| |||||||  |||| ||||||||||    
T  52417602 aatataatgtgagtatgagagagaaagttgtcaaaaagttgtaataaagtagttgtccaaatatcatttttca 52417530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 18954300 - 18954355
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgt 148  Q
    |||||||||| ||||||| ||||||||||||| |||| |||||| ||||| |||||    
T  18954300 aatataatgtaaatatgagagataaagttgttaaaaaattgtcacaaaatggttgt 18954355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 142
Target Start/End: Original strand, 51168762 - 51168817
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaat 142  Q
    |||| ||||||||||||||||||| ||| |||||||| |||||||| ||| |||||    
T  51168762 agtaagaatataatgtgaatatgagagaaaaagttgtctaaaagttatcacaaaat 51168817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 18610838 - 18610776
Alignment:
Q  99 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||| ||||| ||| ||||||||  ||||||||||| |||||||||||| |||| ||||||    
T  18610838 atgtgagtatgagagagaaagttgtaaaaaagttgtcacaaaatagttgtacaaatatcattt 18610776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 21255779 - 21255833
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaa 141  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||||    
T  21255779 agtaagaatataatgtgagtatgagagaaaaagttgtctaaaagttgtcaaaaaa 21255833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 24158718 - 24158680
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgt 134  Q
    ||||||||| |||||||||||||||||| ||||||||||    
T  24158718 ataatgtgagtatgaaagataaagttgtataaaagttgt 24158680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 25988978 - 25989052
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||| ||||| ||| ||| |||| |||||||||| | ||||| |||||| |||| ||||||    
T  25988978 agtaagaatataatgtgagtatgagagagaaaattgtctaaaagttgttaaaaaatggttgtacaaatatcattt 25989052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 27352707 - 27352633
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||| ||||| ||| ||||||||  ||||||| ||| ||||| |||||| |||| ||||||    
T  27352707 agtaagaatataatgtgagtatgagagagaaagttgtccaaaagttatcacaaaatggttgtacaaatatcattt 27352633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 161
Target Start/End: Complemental strand, 33675969 - 33675903
Alignment:
Q  95 tataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||||| ||||| ||| |||||||||  |||||||||| ||| | |||||| |||||||||||    
T  33675969 tataatgtgagtatgagagagaaagttgttacaaagttgtcaaaaagtggttgtacaaatgtcattt 33675903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 136
Target Start/End: Complemental strand, 6954359 - 6954310
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtca 136  Q
    |||| ||| ||||||||||||||| ||||||  |||||||||||||||||    
T  6954359 agtaagaacataatgtgaatatgagagataatattgtttaaaagttgtca 6954310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 11097883 - 11097952
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||| |||||| ||||| ||| ||||||||| ||||||||||| ||||| | |||| |||| ||||||    
T  11097883 gaatattatgtgagtatgagagagaaagttgttcaaaagttgtcacaaaatggatgtacaaatatcattt 11097952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 18541054 - 18541119
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||||| ||| ||||||||  ||||||||| | ||||| |||||| |||| ||||||    
T  18541054 ataatgtgaatatgagagagaaagttgtcaaaaagttgttagaaaatggttgtacaaatatcattt 18541119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 26547306 - 26547237
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||| |||||||||||| ||| ||||||||| |||| |||||| ||||||  |||| |||| ||||||    
T  26547306 gaatattatgtgaatatgagagagaaagttgttcaaaaattgtcacaaaatatatgtacaaatatcattt 26547237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 30439318 - 30439253
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||| ||||| ||||||||||||  |||| |||||||||| | |||||| |||| ||||||    
T  30439318 ataatgtgagtatgagagataaagttgtcaaaaaattgtcataaattggttgtacaaatatcattt 30439253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 142
Target Start/End: Original strand, 34941912 - 34941969
Alignment:
Q  85 atagtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaat 142  Q
    |||||| ||||||||||||| ||||| ||| |||||||| ||||| |||||| |||||    
T  34941912 atagtaagaatataatgtgagtatgagagagaaagttgtctaaaaattgtcacaaaat 34941969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 164
Target Start/End: Original strand, 36930748 - 36930824
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttc 164  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||| ||| |||||  ||||| |||| |||||||||    
T  36930748 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagtt-tcacaaaatgattgtacaaatatcatttttc 36930824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 49596307 - 49596238
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| ||||| ||| ||||||||  |||| |||| ||||||| |||||| |||| ||||||    
T  49596307 gaatataatgtgagtatgagagagaaagttgtcaaaaaattgtaataaaatggttgtacaaatatcattt 49596238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 12999822 - 12999890
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||||||| ||||| ||| ||||||||  ||||||||| | ||||| |||||| |||| ||||||    
T  12999822 aatataatgtgagtatgagagagaaagttgtacaaaagttgttagaaaatggttgtacaaatatcattt 12999890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 48872450 - 48872382
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||| |||||| ||||| ||| || ||||| |||||||||||||||| | |||||| |||| ||||||    
T  48872450 aatatgatgtgagtatgagagagaaggttgtctaaaagttgtcataaagtggttgtacaaatatcattt 48872382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 51038048 - 51037980
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| |||||| | |||||| | |||| ||||||| |||||  |||||||||| ||||||    
T  51038048 aatataatgtgaacatgaaaaagaaagttatctaaatgttgtcaaaaaatgattgtataaatatcattt 51037980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 164
Target Start/End: Original strand, 51172307 - 51172376
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttc 164  Q
    |||||||||||| ||||| |||  ||||||||||||||||||||  || | |||||| |||| |||||||||    
T  51172307 aatataatgtgagtatgagaga--aagttgtttaaaagttgtcacgaagtggttgtacaaatatcatttttc 51172376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 37392115 - 37392046
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||| ||||| |||||| |||| ||||||    
T  37392115 gaatataatgtgagtatgagagataaagttgtttaaaagttgtcaaaaaatggttgtacaaatatcattt 37392046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 168
Target Start/End: Complemental strand, 26123444 - 26123362
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtc-ataaaatagttgtataaatgtcatttttcaaga 168  Q
    |||| ||||||||||||||||||| ||| |||||||| ||||||||||| | |||||||||||| |||| ||||| |||||||    
T  26123444 agtaagaatataatgtgaatatgagagagaaagttgtctaaaagttgtcaaaaaaatagttgtacaaatatcattcttcaaga 26123362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 161
Target Start/End: Complemental strand, 4971369 - 4971293
Alignment:
Q  85 atagtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||||| |||||| |||| ||||||    
T  4971369 atagtaagaatataatgtgagtatgagagagaaagttgtataaaagttgtcacaaaatggttgtacaaatatcattt 4971293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 40760770 - 40760841
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 166  Q
    |||| ||||| |||||||||||  |||||||| ||||||| ||| ||||||||||||||||| |||||||||||    
T  40760770 aatacaatgtaaatatgaaaga--aagttgttcaaaagttatcacaaaatagttgtataaatatcatttttcaa 40760841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 22692156 - 22692087
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||| | ||||| ||| ||| ||||||||||||||||||||||| |||||| |||| ||||||    
T  22692156 gaatataatgtaagtatgagagagaaaattgtttaaaagttgtcataaaatggttgtacaaatatcattt 22692087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 28110028 - 28109955
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 166  Q
    |||||||||||| ||||  ||||||||||||||||||||||||| ||| | |||||| |||| |||||| ||||    
T  28110028 aatataatgtgagtatgtgagataaagttgtttaaaagttgtcaaaaagtggttgtacaaatatcatttctcaa 28109955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 164
Target Start/End: Original strand, 34304672 - 34304749
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttc 164  Q
    |||| ||||||||||||| ||||| ||| ||| |||| ||||| |||||| |||||||||||| |||| |||||||||    
T  34304672 agtaagaatataatgtgagtatgagagagaaaattgtctaaaaattgtcaaaaaatagttgtacaaatatcatttttc 34304749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 45154539 - 45154607
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| ||||||||| |||||| | |||||||||||| |||||||||||| |||| ||||||    
T  45154539 gaatataatgtgagtatgaaagagaaagttatctaaaagttgtca-aaaatagttgtacaaatatcattt 45154607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 40693528 - 40693596
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||||| | ||||| ||| |||||||| |||||||||||| |||||||||||| |||| ||||||    
T  40693528 aatataatgtaagtatgagagagaaagttgtctaaaagttgtcaaaaaatagttgtacaaatatcattt 40693596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 44187768 - 44187713
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaat 142  Q
    |||| ||||||||||||| ||||| | ||||||||||||||||||||||| |||||    
T  44187768 agtaagaatataatgtgagtatgagaaataaagttgtttaaaagttgtcaaaaaat 44187713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 8061738 - 8061812
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||||||||||||| ||| || | ||||| || ||||||||| |||||| |||| ||||||    
T  8061738 agtaagaatataatgtgaatatgaaagagaaaattatctaaaatttttcataaaatggttgtagaaatatcattt 8061812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 166
Target Start/End: Complemental strand, 42640911 - 42640841
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 166  Q
    ||||||||| |||| |||| ||||||||  ||||||||| | |||||||||||| |||| |||||||||||    
T  42640911 ataatgtgagtatgtaagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcatttttcaa 42640841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 26153717 - 26153649
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| ||||| ||| ||| ||||  |||||||||||||||||||||||| |||| ||||||    
T  26153717 gaatataatgtgagtatgagagagaaaattgtc-aaaagttgtcataaaatagttgtacaaatatcattt 26153649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 44564722 - 44564790
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| ||||||| | |||||||| ||||| |||||| |||||||||||| |||| ||||||    
T  44564722 gaatataatgtgagtatgaaataaaaagttgtctaaaaattgtca-aaaatagttgtacaaatatcattt 44564790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 5724110 - 5724042
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatt 160  Q
    ||||||||||||| ||||| ||| ||||||||| ||||||||| ||||| | |||||| |||| |||||    
T  5724110 gaatataatgtgagtatgagagagaaagttgttaaaaagttgtaataaagtggttgtacaaatatcatt 5724042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 5868301 - 5868373
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttc 164  Q
    |||||| |||||| ||| ||||| ||||||||| ||||||||| | |||||||||||| |||| || ||||||    
T  5868301 gaatatcatgtgagtataaaagaaaaagttgttcaaaagttgttacaaaatagttgtacaaatatcgtttttc 5868373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 43107681 - 43107637
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcat 137  Q
    |||||||||||| ||||| |||||||||||| |||||||||||||    
T  43107681 aatataatgtgagtatgagagataaagttgtctaaaagttgtcat 43107637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 142
Target Start/End: Complemental strand, 5978648 - 5978601
Alignment:
Q  95 tataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaat 142  Q
    |||||||||| ||||||||| ||| ||||| |||||||||||||||||    
T  5978648 tataatgtgagtatgaaagagaaaattgttaaaaagttgtcataaaat 5978601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 165
Target Start/End: Original strand, 18925991 - 18926067
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttca 165  Q
    |||| ||||||||||||| ||||| ||| ||||||||| ||||||||||  |||| | ||||| |||| ||||||||||    
T  18925991 agtaagaatataatgtgagtatgagagagaaagttgttcaaaagttgtc--aaaaaaattgtacaaatatcatttttca 18926067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 161
Target Start/End: Complemental strand, 28824572 - 28824506
Alignment:
Q  95 tataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||||||||||| ||| ||||||||  ||||||||||| ||| | |||||| |||| ||||||    
T  28824572 tataatgtgaatatgagagagaaagttgtcaaaaagttgtcagaaagtggttgtacaaatatcattt 28824506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 30769664 - 30769727
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||| ||||| ||||||||||||  |||||||||  ||||||||||||| |||| ||||||    
T  30769664 ataatgtgagtatgagagataaagttgtcaaaaagttgt--taaaatagttgtacaaatatcattt 30769727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 37385239 - 37385301
Alignment:
Q  99 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||| ||||| ||| ||||||||  ||||||||||| |||||||||||| |||| ||||||    
T  37385239 atgtgagtatgagagagaaagttgtacaaaagttgtcaaaaaatagttgtacaaatatcattt 37385301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 142
Target Start/End: Complemental strand, 46148238 - 46148188
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaat 142  Q
    ||||||||||||| ||||| ||||||| |||||| |||||||||| |||||    
T  46148238 gaatataatgtgagtatgagagataaacttgtttcaaagttgtcaaaaaat 46148188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 47530305 - 47530359
Alignment:
Q  107 atgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||| ||| ||||| ||||||||||||||||| ||||||||||| ||||||    
T  47530305 atgagagagaaaattgttcaaaagttgtcataaaatggttgtataaatatcattt 47530359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 16567388 - 16567319
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| ||||||||| ||| ||||  ||||||| | ||||||| |||||| |||| ||||||    
T  16567388 gaatataatgtgagtatgaaagagaaaattgtcaaaaagttataataaaatggttgtacaaatatcattt 16567319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 16598274 - 16598343
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| ||||||||| ||| ||||  ||||||| | ||||||| |||||| |||| ||||||    
T  16598274 gaatataatgtgagtatgaaagagaaaattgtcaaaaagttataataaaatggttgtacaaatatcattt 16598343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 17500769 - 17500700
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| ||||| ||||||||||||  ||||||| | ||||| | |||||| |||| ||||||    
T  17500769 gaatataatgtgagtatgagagataaagttgtcaaaaagttataataaagtggttgtacaaatatcattt 17500700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 17552445 - 17552514
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| ||||| ||||||||||||  ||||||| | ||||| | |||||| |||| ||||||    
T  17552445 gaatataatgtgagtatgagagataaagttgtcaaaaagttataataaagtggttgtacaaatatcattt 17552514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 19426648 - 19426583
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||| ||||| ||| ||||||||  ||||||||||| ||||| |||||| |||| ||||||    
T  19426648 ataatgtgagtatgagagagaaagttgtcaaaaagttgtcacaaaatggttgtacaaatatcattt 19426583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 35098785 - 35098825
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtca 136  Q
    |||| |||| ||||||||| |||||||||||||||||||||    
T  35098785 ataacgtgagtatgaaagagaaagttgtttaaaagttgtca 35098825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 154
Target Start/End: Original strand, 46456647 - 46456695
Alignment:
Q  106 tatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaat 154  Q
    ||||| ||| ||||||||| ||||||||| ||||||| |||||||||||    
T  46456647 tatgagagaaaaagttgttaaaaagttgtaataaaatggttgtataaat 46456695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 9e-17; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 12044403 - 12044335
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||||||| ||||| ||| |||||||| |||||||||||| ||||||||||||||||| ||||||    
T  12044403 aatataatgtgagtatgagagagaaagttgtctaaaagttgtcaaaaaatagttgtataaatatcattt 12044335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 9188938 - 9189012
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||| ||||| |||||||||||| |||||||||| | ||||| |||||| |||| ||||||    
T  9188938 agtaagaatataatgtgagtatgagagataaagttgtctaaaagttgttaaaaaatggttgtacaaatatcattt 9189012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 32729966 - 32729892
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||||| |||||| |||| ||||||    
T  32729966 agtaagaatataatgtgagtatgagagagaaagttgtataaaagttgtcagaaaatggttgtacaaatatcattt 32729892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 30744314 - 30744247
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaat 154  Q
    |||| ||||||||||||| ||||| ||| ||||||||||||||| ||||| ||||| |||||| ||||    
T  30744314 agtaagaatataatgtgagtatgagagacaaagttgtttaaaaggtgtcacaaaatggttgtacaaat 30744247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 14803376 - 14803428
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgt 148  Q
    ||||||||| ||||||||| | ||||||| ||||||||||| |||||||||||    
T  14803376 ataatgtgagtatgaaagagagagttgttaaaaagttgtcacaaaatagttgt 14803428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 161
Target Start/End: Complemental strand, 20712145 - 20712070
Alignment:
Q  85 atagtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||| ||||||||||||  ||||| ||| |||||||| |||||||||| | |||||||||||| |||| ||||||    
T  20712145 atagtaagaatataatgtgcgtatgagagagaaagttgtctaaaagttgtta-aaaatagttgtacaaatatcattt 20712070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 35077190 - 35077126
Alignment:
Q  98 aatgtgaatatgaaagataaagttgtt-taaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||| ||||||||||||||||||| |||||||||||| ||||| |||||  |||| ||||||    
T  35077190 aatgtgagtatgaaagataaagttgttataaaagttgtcaaaaaattgttgttcaaatatcattt 35077126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 6435101 - 6435039
Alignment:
Q  99 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||| ||||| |||||||||||| |||||||||||| ||| | |||||| |||| ||||||    
T  6435101 atgtgagtatgagagataaagttgtctaaaagttgtcacaaagtggttgtacaaatatcattt 6435039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 29376721 - 29376783
Alignment:
Q  99 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||| ||||| ||| ||||||||| ||||||||||| ||||| |||||| |||| ||||||    
T  29376721 atgtgactatgatagagaaagttgttaaaaagttgtcacaaaatggttgtaaaaatatcattt 29376783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 11785427 - 11785358
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||||||||| | | ||||||||  |||| |||||| ||||| |||||| |||| ||||||    
T  11785427 gaatataatgtgaatatgagatagaaagttgtcaaaaaattgtcacaaaatggttgtacaaatatcattt 11785358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 21506404 - 21506339
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||| ||||| ||| ||||||||  ||||||||||| ||||| |||||| |||| ||||||    
T  21506404 ataatgtgagtatgagagagaaagttgtcaaaaagttgtcaaaaaatggttgtacaaatatcattt 21506339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 8173312 - 8173380
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||||||||||||||||| ||| |||| |||||||| ||| ||| | |||| | |||| ||||||    
T  8173312 aatataatgtgaatatgaaagagaaaattgtctaaaagttatcacaaagtggttgcacaaatatcattt 8173380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 18792431 - 18792475
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtca 136  Q
    ||||||||||||| ||||| ||| ||||||||| |||||||||||    
T  18792431 gaatataatgtgagtatgagagagaaagttgttaaaaagttgtca 18792475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 32621840 - 32621804
Alignment:
Q  125 taaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||||||||||||| ||||||||||| ||||||    
T  32621840 taaaagttgtcataaaatggttgtataaatatcattt 32621804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 1052490 - 1052564
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||||||||| |||||||||||| |||||||||| | ||||| |||||| |||| ||||||    
T  1052490 agtaagaatataatgtgaatatgagagataaagttgtctaaaagttgttaaaaaatggttgtacaaatatcattt 1052564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 9202519 - 9202584
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||||||||| ||||||||  |||| |||||||||||| |||||| |||| ||||||    
T  9202519 ataatgtgaatatgaaagagaaagttgtcaaaaaattgtcataaaatggttgtagaaatatcattt 9202584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 36816419 - 36816484
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||||||||| | ||||||  |||| || ||||||||||||||||||||| ||||||    
T  36816419 ataatgtgaatatgaaagagagagttgtcaaaaaattatcataaaatagttgtataaatatcattt 36816484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 142
Target Start/End: Original strand, 6742404 - 6742459
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaat 142  Q
    |||| ||| ||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  6742404 agtaagaagataatgtgaatatgaaagagaaagttgttcaaaagttgtcacaaaat 6742459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 161
Target Start/End: Complemental strand, 14714055 - 14713989
Alignment:
Q  95 tataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||||| ||||| ||| || |||||||||||||||||||||||| | |||| |||| ||||||    
T  14714055 tataatgtgagtatgagagagaatgttgtttaaaagttgtcataaaattgatgtacaaatatcattt 14713989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 23358573 - 23358647
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||| | ||||| || |||||||| ||||||    
T  23358573 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgttaaaaaattgtagtataaatatcattt 23358647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 30856884 - 30856810
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||| | |||||| |||| ||||||    
T  30856884 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaagtggttgtacaaatatcattt 30856810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 36763518 - 36763591
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||| ||||||||| |||||||| |||||||| ||| |||| ||||||| |||| ||||||    
T  36763518 agtaagaatataatgtgagtatgaaagagaaagttgtataaaagttatca-aaaaaagttgtacaaatatcattt 36763591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 43621961 - 43622015
Alignment:
Q  106 tatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatt 160  Q
    ||||| ||| ||||||||| |||||||||||||||||||||||| |||| |||||    
T  43621961 tatgagagagaaagttgttcaaaagttgtcataaaatagttgtacaaatatcatt 43622015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 161
Target Start/End: Original strand, 3299128 - 3299173
Alignment:
Q  116 aaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||||||||||||||||| |||||| |||| ||||||    
T  3299128 aaagttgtttaaaagttgtcataaaatggttgtacaaatatcattt 3299173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 546385 - 546453
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||||||| ||||| ||| ||||||||| ||||||||| ||||| | |||||| |||| ||||||    
T  546385 aatataatgtgagtatgagagagaaagttgttaaaaagttgtaataaagtggttgtacaaatatcattt 546453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 7497991 - 7498059
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||||||| ||||| ||| ||||||||  ||||||||| ||||||| |||||| |||| ||||||    
T  7497991 aatataatgtgagtatgagagagaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcattt 7498059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 35965647 - 35965575
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttc 164  Q
    ||||||||||||| ||||||||| ||||||||  |||| |||| ||||| | |||||| |||| |||||||||    
T  35965647 gaatataatgtgagtatgaaagagaaagttgtcaaaaaattgtaataaagtggttgtacaaatatcatttttc 35965575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 8352912 - 8352838
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||| ||||| ||| ||| |||| |||||||| | | |||||||||||| |||| ||||||    
T  8352912 agtaagaatataatgtgagtatgagagagaaaattgtctaaaagttattaaaaaatagttgtacaaatatcattt 8352838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 142
Target Start/End: Original strand, 14954598 - 14954648
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaat 142  Q
    |||||| |||||||||||| ||| ||||||||| ||||||||||| |||||    
T  14954598 gaatattatgtgaatatgagagagaaagttgttcaaaagttgtcacaaaat 14954648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 15283244 - 15283318
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||| ||||| ||| |||||||| ||||| |||||| ||| | |||||| |||| ||||||    
T  15283244 agtaagaatataatgtgagtatgagagagaaagttgtctaaaaattgtcacaaagtggttgtacaaatatcattt 15283318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 166
Target Start/End: Complemental strand, 28165201 - 28165127
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 166  Q
    ||||||||||||| ||||| ||| ||| |||| |||||||||||| ||||| |||||| || | |||||| ||||    
T  28165201 gaatataatgtgagtatgagagagaaaattgtctaaaagttgtcacaaaatggttgtacaagtatcatttctcaa 28165127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 39147834 - 39147780
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtt-taaaagttgtcataaaatagttgta 149  Q
    ||||||||||||||||||| |||||||||  ||||||||| | ||||||||||||    
T  39147834 ataatgtgaatatgaaagagaaagttgttacaaaagttgtaaaaaaatagttgta 39147780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 2308321 - 2308390
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| ||||| ||||||||||||  ||| ||||||| ||| | |||||| |||| ||||||    
T  2308321 gaatataatgtgagtatgagagataaagttgtcaaaaggttgtcaaaaattggttgtacaaatatcattt 2308390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 3959966 - 3959897
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| ||||| ||| ||| |||| |||||||||||| ||||  |||||| |||| ||||||    
T  3959966 gaatataatgtgagtatgagagagaaaattgtgtaaaagttgtcaaaaaaaggttgtacaaatatcattt 3959897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 6746285 - 6746220
Alignment:
Q  96 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||| ||||||||| ||| ||| ||||| ||||||||| | ||| ||||||||||||| ||||||    
T  6746285 ataatatgaatatgagagagaaaattgttaaaaagttgttaaaaattagttgtataaatatcattt 6746220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 22303248 - 22303199
Alignment:
Q  119 gttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaaga 168  Q
    |||||| ||||||||||| |||||||||||| |||| |||||| ||||||    
T  22303248 gttgttcaaaagttgtcaaaaaatagttgtacaaatatcatttctcaaga 22303199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 42554848 - 42554779
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| ||||| ||| ||||||||  ||||||||| ||||| | |||||| |||| ||||||    
T  42554848 gaatataatgtgagtatgagagagaaagttgtaaaaaagttgtaataaagtggttgtacaaatatcattt 42554779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 4842519 - 4842563
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtca 136  Q
    ||||||||||||| ||||| ||| |||||||| ||||||||||||    
T  4842519 gaatataatgtgagtatgagagagaaagttgtctaaaagttgtca 4842563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 6666091 - 6666023
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||||||| ||||| ||| ||||| ||  ||||||||| ||||||| |||||| |||| ||||||    
T  6666091 aatataatgtgagtatgagagagaaagtcgtaaaaaagttgtaataaaatggttgtacaaatatcattt 6666023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 9449414 - 9449454
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagtt 132  Q
    ||||||||||||||||||| ||| ||||||||| |||||||    
T  9449414 gaatataatgtgaatatgagagagaaagttgttaaaaagtt 9449454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 20508384 - 20508420
Alignment:
Q  118 agttgtttaaaagttgtcataaaatagttgtataaat 154  Q
    |||||| |||||||||| |||||||||||||||||||    
T  20508384 agttgtataaaagttgttataaaatagttgtataaat 20508420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 27939229 - 27939157
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtt-taaaagttgtcataaaatagttgtataaatgtcatttttc 164  Q
    |||||||| ||| ||||| |||||| ||| |  ||||| |||||| ||||||||||||||||| |||||||||    
T  27939229 aatataatatgagtatgagagataatgttatcataaaaattgtcacaaaatagttgtataaatatcatttttc 27939157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 37966655 - 37966588
Alignment:
Q  93 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||||||| ||||||||| ||| ||||  |||||||||  |||||| ||||||||||| ||||||    
T  37966655 aatataatgtgagtatgaaagagaaaattgtc-aaaagttgttttaaaatggttgtataaatatcattt 37966588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 60541 - 60472
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||||||||||||| ||||||||  ||||||||| ||||||| |||||| |||| ||||||    
T  60541 gaatataatgtgaatatgaaagaaaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcattt 60472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 440795 - 440721
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||| ||||||| ||||| ||| |||||||| |||||||||||||||| |||||||| |||| ||||||    
T  440795 agtaagaatagaatgtgagtatgagagagaaagttgtctaaaagttgtcataaagtagttgtacaaatatcattt 440721  T

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Target: scaffold0662 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 1135 - 1081
Alignment:
Q  107 atgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||| ||||||||||||||||||||| |||||||||||| |||| ||||||    
T  1135 atgagagagaaagttgtttaaaagttgtcacaaaatagttgtacaaatatcattt 1081  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 337195 - 337121
Alignment:
Q  87 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||| ||||||||||||| ||||| ||| |||||| || ||||||||||| ||||| |||||| |||| ||||||    
T  337195 agtaagaatataatgtgagtatgagagagaaagttattcaaaagttgtcagaaaatggttgtacaaatatcattt 337121  T

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Target: scaffold0252 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 8001 - 8045
Alignment:
Q  119 gttgtttaaaagttgtcataaaatagttgtataaatgtcattttt 163  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||||    
T  8001 gttgttcaaaagttgtcataaaatggttgtataaatatcattttt 8045  T

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Target: scaffold0041 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 161
Target Start/End: Complemental strand, 34477 - 34411
Alignment:
Q  95 tataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    |||||||||| ||||| ||| ||||||||   |||||||||| |||||||||||| |||| ||||||    
T  34477 tataatgtgagtatgagagagaaagttgtcacaaagttgtcaaaaaatagttgtacaaatatcattt 34411  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 166
Target Start/End: Complemental strand, 155978 - 155904
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 166  Q
    ||||||||||||| || || ||| ||||||||  ||||||||| ||||||| |||||| |||| |||||| ||||    
T  155978 gaatataatgtgagtacgagagagaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctcaa 155904  T

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Target: scaffold0154 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 4387 - 4318
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 161  Q
    ||||||||||||| ||||| | | ||||||||  ||||||| ||||||||| |||||| |||| ||||||    
T  4387 gaatataatgtgagtatgagatagaaagttgtcaaaaagttatcataaaatggttgtacaaatatcattt 4318  T

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Target: scaffold0511 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 11710 - 11666
Alignment:
Q  92 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtca 136  Q
    ||||||||||||| ||||| ||| ||||||||| |||||||||||    
T  11710 gaatataatgtgagtatgagagagaaagttgttaaaaagttgtca 11666  T

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